Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64148.t1 | XP_003615163.1 | 98 | 353 | 6 | 1 | 1 | 352 | 1 | 353 | 4.50E-193 | 683.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64148.t1 | Q9THX6 | 70.9 | 344 | 96 | 2 | 9 | 352 | 6 | 345 | 4.8e-135 | 482.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64148.t1 | G7KAG7 | 98.0 | 353 | 6 | 1 | 1 | 352 | 1 | 353 | 3.2e-193 | 683.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene64148 | 0.800262 | 1.57E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene64148 | 0.825304 | 5.04E-54 | -1.69E-46 |
| MS.gene049491 | MS.gene64148 | 0.832487 | 9.19E-56 | -1.69E-46 |
| MS.gene049614 | MS.gene64148 | 0.87577 | 2.37E-68 | -1.69E-46 |
| MS.gene049661 | MS.gene64148 | 0.813025 | 3.15E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene64148 | 0.8044 | 2.20E-49 | -1.69E-46 |
| MS.gene049760 | MS.gene64148 | 0.811893 | 5.57E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene64148 | 0.874978 | 4.43E-68 | -1.69E-46 |
| MS.gene050163 | MS.gene64148 | 0.810927 | 9.04E-51 | -1.69E-46 |
| MS.gene050397 | MS.gene64148 | 0.827174 | 1.81E-54 | -1.69E-46 |
| MS.gene050404 | MS.gene64148 | 0.805646 | 1.21E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene64148 | 0.856393 | 3.32E-62 | -1.69E-46 |
| MS.gene050475 | MS.gene64148 | -0.806639 | 7.46E-50 | -1.69E-46 |
| MS.gene050541 | MS.gene64148 | -0.802881 | 4.54E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene64148 | 0.874536 | 6.26E-68 | -1.69E-46 |
| MS.gene050770 | MS.gene64148 | 0.876649 | 1.18E-68 | -1.69E-46 |
| MS.gene05101 | MS.gene64148 | 0.871608 | 6.00E-67 | -1.69E-46 |
| MS.gene051228 | MS.gene64148 | 0.867094 | 1.76E-65 | -1.69E-46 |
| MS.gene051692 | MS.gene64148 | 0.816035 | 6.81E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene64148 | 0.847784 | 9.29E-60 | -1.69E-46 |
| MS.gene051858 | MS.gene64148 | 0.807248 | 5.55E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene64148 | 0.819545 | 1.10E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene64148 | 0.865196 | 7.04E-65 | -1.69E-46 |
| MS.gene052287 | MS.gene64148 | 0.802072 | 6.67E-49 | -1.69E-46 |
| MS.gene052290 | MS.gene64148 | 0.900311 | 8.32E-78 | -1.69E-46 |
| MS.gene052293 | MS.gene64148 | 0.800944 | 1.14E-48 | -1.69E-46 |
| MS.gene052310 | MS.gene64148 | 0.806869 | 6.67E-50 | -1.69E-46 |
| MS.gene052326 | MS.gene64148 | 0.843925 | 1.04E-58 | -1.69E-46 |
| MS.gene052379 | MS.gene64148 | 0.865631 | 5.13E-65 | -1.69E-46 |
| MS.gene052484 | MS.gene64148 | 0.806423 | 8.29E-50 | -1.69E-46 |
| MS.gene053009 | MS.gene64148 | 0.844268 | 8.40E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene64148 | 0.81957 | 1.08E-52 | -1.69E-46 |
| MS.gene053104 | MS.gene64148 | 0.825049 | 5.79E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene64148 | 0.813283 | 2.77E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene64148 | 0.848008 | 8.06E-60 | -1.69E-46 |
| MS.gene053213 | MS.gene64148 | 0.807211 | 5.65E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene64148 | 0.877104 | 8.21E-69 | -1.69E-46 |
| MS.gene053384 | MS.gene64148 | 0.815296 | 9.94E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene64148 | 0.878713 | 2.25E-69 | -1.69E-46 |
| MS.gene054642 | MS.gene64148 | 0.822118 | 2.81E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene64148 | 0.844791 | 6.07E-59 | -1.69E-46 |
| MS.gene054803 | MS.gene64148 | 0.848095 | 7.62E-60 | -1.69E-46 |
| MS.gene054804 | MS.gene64148 | 0.849895 | 2.41E-60 | -1.69E-46 |
| MS.gene055206 | MS.gene64148 | 0.802598 | 5.20E-49 | -1.69E-46 |
| MS.gene055212 | MS.gene64148 | 0.81068 | 1.02E-50 | -1.69E-46 |
| MS.gene055254 | MS.gene64148 | 0.897481 | 1.35E-76 | -1.69E-46 |
| MS.gene055277 | MS.gene64148 | 0.847857 | 8.87E-60 | -1.69E-46 |
| MS.gene055397 | MS.gene64148 | 0.860849 | 1.55E-63 | -1.69E-46 |
| MS.gene055497 | MS.gene64148 | -0.819183 | 1.33E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene64148 | 0.884644 | 1.61E-71 | -1.69E-46 |
| MS.gene055636 | MS.gene64148 | 0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene64148 | 0.840221 | 9.91E-58 | -1.69E-46 |
| MS.gene055722 | MS.gene64148 | 0.816609 | 5.06E-52 | -1.69E-46 |
| MS.gene055896 | MS.gene64148 | 0.8029 | 4.51E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene64148 | 0.83994 | 1.17E-57 | -1.69E-46 |
| MS.gene055956 | MS.gene64148 | -0.802843 | 4.63E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene64148 | 0.824202 | 9.17E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene64148 | 0.805392 | 1.37E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene64148 | 0.830406 | 2.99E-55 | -1.69E-46 |
| MS.gene056410 | MS.gene64148 | 0.83537 | 1.75E-56 | -1.69E-46 |
| MS.gene056609 | MS.gene64148 | 0.864918 | 8.61E-65 | -1.69E-46 |
| MS.gene056611 | MS.gene64148 | 0.801483 | 8.81E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene64148 | 0.803138 | 4.02E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene64148 | 0.805631 | 1.22E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene64148 | 0.825406 | 4.77E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene64148 | 0.813371 | 2.65E-51 | -1.69E-46 |
| MS.gene057123 | MS.gene64148 | 0.814546 | 1.46E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene64148 | 0.86605 | 3.78E-65 | -1.69E-46 |
| MS.gene057146 | MS.gene64148 | 0.807155 | 5.80E-50 | -1.69E-46 |
| MS.gene057246 | MS.gene64148 | 0.808179 | 3.52E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene64148 | 0.845055 | 5.15E-59 | -1.69E-46 |
| MS.gene057331 | MS.gene64148 | 0.82086 | 5.49E-53 | -1.69E-46 |
| MS.gene05733 | MS.gene64148 | 0.820979 | 5.15E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene64148 | 0.817229 | 3.67E-52 | -1.69E-46 |
| MS.gene05806 | MS.gene64148 | 0.805019 | 1.63E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene64148 | 0.801731 | 7.84E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene64148 | 0.834877 | 2.32E-56 | -1.69E-46 |
| MS.gene058723 | MS.gene64148 | 0.820563 | 6.42E-53 | -1.69E-46 |
| MS.gene058903 | MS.gene64148 | 0.823994 | 1.03E-53 | -1.69E-46 |
| MS.gene059029 | MS.gene64148 | 0.835972 | 1.23E-56 | -1.69E-46 |
| MS.gene059326 | MS.gene64148 | 0.819925 | 8.99E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene64148 | 0.845525 | 3.85E-59 | -1.69E-46 |
| MS.gene059597 | MS.gene64148 | 0.800909 | 1.16E-48 | -1.69E-46 |
| MS.gene059676 | MS.gene64148 | 0.805609 | 1.23E-49 | -1.69E-46 |
| MS.gene059692 | MS.gene64148 | 0.822962 | 1.79E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene64148 | 0.818075 | 2.37E-52 | -1.69E-46 |
| MS.gene059858 | MS.gene64148 | 0.879354 | 1.33E-69 | -1.69E-46 |
| MS.gene059894 | MS.gene64148 | 0.830052 | 3.65E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene64148 | 0.80647 | 8.10E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene64148 | 0.860226 | 2.39E-63 | -1.69E-46 |
| MS.gene059974 | MS.gene64148 | 0.812815 | 3.51E-51 | -1.69E-46 |
| MS.gene060005 | MS.gene64148 | 0.812042 | 5.17E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene64148 | 0.844721 | 6.34E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene64148 | 0.833177 | 6.19E-56 | -1.69E-46 |
| MS.gene061041 | MS.gene64148 | 0.812671 | 3.77E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene64148 | 0.863553 | 2.29E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64148.t1 | MTR_5g064610 | 98.017 | 353 | 6 | 1 | 1 | 352 | 1 | 353 | 0.0 | 710 |
| MS.gene64148.t1 | MTR_4g073410 | 28.846 | 260 | 109 | 9 | 108 | 330 | 24 | 244 | 8.51e-14 | 71.2 |
| MS.gene64148.t1 | MTR_5g022510 | 32.934 | 167 | 74 | 5 | 112 | 276 | 27 | 157 | 6.04e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64148.t1 | AT4G09010 | 69.122 | 353 | 101 | 5 | 2 | 352 | 3 | 349 | 6.50e-170 | 477 |
| MS.gene64148.t1 | AT4G09010 | 69.122 | 353 | 101 | 5 | 2 | 352 | 50 | 396 | 2.16e-168 | 475 |
| MS.gene64148.t1 | AT4G09010 | 77.289 | 273 | 62 | 0 | 80 | 352 | 12 | 284 | 9.71e-156 | 439 |
| MS.gene64148.t1 | AT4G35970 | 30.864 | 243 | 125 | 9 | 108 | 330 | 22 | 241 | 5.94e-15 | 74.7 |
| MS.gene64148.t1 | AT4G35970 | 32.973 | 185 | 87 | 7 | 95 | 277 | 7 | 156 | 6.32e-15 | 73.6 |
| MS.gene64148.t1 | AT4G35000 | 30.612 | 196 | 90 | 7 | 111 | 302 | 26 | 179 | 1.83e-13 | 70.5 |
Find 86 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTTACAGCTCAAATTAA+AGG | 0.197481 | 5.1:-49624707 | MS.gene64148:intron |
| ACACTTGCTTTCTCCCAAAT+TGG | 0.208655 | 5.1:+49623008 | None:intergenic |
| CAGAGGGGAGAATTCCAATT+TGG | 0.239430 | 5.1:-49623022 | MS.gene64148:CDS |
| GGATGCAACAGAGACCTTAT+TGG | 0.348952 | 5.1:-49622314 | MS.gene64148:CDS |
| TGCTTCCTCTATAAAATTCA+AGG | 0.360339 | 5.1:+49623969 | None:intergenic |
| TGTACCCATGGAGCAACATC+TGG | 0.365811 | 5.1:+49622283 | None:intergenic |
| GACGCTATATACAGCAATAA+AGG | 0.382507 | 5.1:-49624684 | MS.gene64148:intron |
| ATGAAGAAGAACAGTTCAAT+TGG | 0.384244 | 5.1:-49626748 | MS.gene64148:CDS |
| AGAGGGGAGAATTCCAATTT+GGG | 0.391351 | 5.1:-49623021 | MS.gene64148:CDS |
| CCTTCTCTCCATCCACTTGG+TGG | 0.400089 | 5.1:-49627210 | MS.gene64148:CDS |
| GTCTCTGTTGCATCCTGATC+AGG | 0.401349 | 5.1:+49622322 | None:intergenic |
| TTCTTACAGCTCAAATTAAA+GGG | 0.408017 | 5.1:-49624706 | MS.gene64148:intron |
| AGTTTGTAGGCAACGAAAAC+GGG | 0.408809 | 5.1:-49624398 | MS.gene64148:intron |
| TTCACAAAATTGAGTACCTT+GGG | 0.415559 | 5.1:-49622080 | MS.gene64148:CDS |
| TACACTGCATATGGATCAAA+TGG | 0.415823 | 5.1:-49623629 | MS.gene64148:CDS |
| ATCTGGATCAGATGCCAATA+AGG | 0.416378 | 5.1:+49622300 | None:intergenic |
| ATGAGATCTGCATAGGAAAT+AGG | 0.417756 | 5.1:+49623913 | None:intergenic |
| CAAATGGTTCTATCCGGTTC+AGG | 0.423018 | 5.1:-49624370 | MS.gene64148:intron |
| AAGTTTGTAGGCAACGAAAA+CGG | 0.425385 | 5.1:-49624399 | MS.gene64148:intron |
| CGATGCTTTGACTTATGATA+AGG | 0.425822 | 5.1:-49624499 | MS.gene64148:intron |
| AATTTACTCTACACTGCATA+TGG | 0.428559 | 5.1:-49623638 | MS.gene64148:CDS |
| AGCTATACTTACCTCATAAT+CGG | 0.431316 | 5.1:+49622225 | None:intergenic |
| GCTGTGTTGTCCGCATTCAT+AGG | 0.436481 | 5.1:-49622346 | MS.gene64148:CDS |
| TTGGGAGAAAGCAAGTGTTC+AGG | 0.442764 | 5.1:-49623003 | MS.gene64148:CDS |
| CATTGGCGTGGCCATTGGTT+TGG | 0.446869 | 5.1:-49626702 | MS.gene64148:intron |
| AAATGCATTGGCGTGGCCAT+TGG | 0.448329 | 5.1:-49626707 | MS.gene64148:CDS |
| GGTTTGTTCGATAGGCAATT+TGG | 0.451516 | 5.1:-49623071 | MS.gene64148:CDS |
| CGCATTCATAGGTCCTGATC+AGG | 0.453856 | 5.1:-49622335 | MS.gene64148:CDS |
| CTGAACCGGATAGAACCATT+TGG | 0.455331 | 5.1:+49624371 | None:intergenic |
| GAAATGTTCAACCTGCATAC+TGG | 0.458175 | 5.1:+49623890 | None:intergenic |
| GTTTAGAGCCAGTGTTAGAA+TGG | 0.459963 | 5.1:+49624521 | None:intergenic |
| CAAATTGGAATTCTCCCCTC+TGG | 0.464493 | 5.1:+49623023 | None:intergenic |
| TGTCTCTCGAACCGATTATG+AGG | 0.467601 | 5.1:-49622236 | MS.gene64148:intron |
| AAGGAAGAGTTGAGATTGAG+AGG | 0.468313 | 5.1:+49627229 | None:intergenic |
| ACGAAAACGGGTGGCCCAAA+TGG | 0.472902 | 5.1:-49624386 | MS.gene64148:CDS |
| AGCGCTGTCTGCGTTCTATT+AGG | 0.478156 | 5.1:+49624829 | None:intergenic |
| TCAAGCTCTGGATCGCTCCT+TGG | 0.478254 | 5.1:-49624870 | MS.gene64148:CDS |
| CTTCCTTCTCTCCATCCACT+TGG | 0.486731 | 5.1:-49627213 | MS.gene64148:CDS |
| TACTGAACGAGGTTGGTGTC+TGG | 0.488795 | 5.1:+49627161 | None:intergenic |
| AGAGATGTTCTTAAATGCAT+TGG | 0.494004 | 5.1:-49626719 | MS.gene64148:CDS |
| TGAACCGGATAGAACCATTT+GGG | 0.495657 | 5.1:+49624372 | None:intergenic |
| TTTCACAAAATTGAGTACCT+TGG | 0.502680 | 5.1:-49622081 | MS.gene64148:CDS |
| TGATCCAGATGTTGCTCCAT+GGG | 0.508395 | 5.1:-49622287 | MS.gene64148:CDS |
| GCGGTGGAAATGAGGAGAAA+GGG | 0.509126 | 5.1:-49623661 | MS.gene64148:CDS |
| AGAGCCAGTGTTAGAATGGA+TGG | 0.509679 | 5.1:+49624525 | None:intergenic |
| CAGCAGCATTAGCGGTTCCA+AGG | 0.510943 | 5.1:+49624853 | None:intergenic |
| ATAGGAAATAGGTCCACCTT+TGG | 0.513096 | 5.1:+49623924 | None:intergenic |
| AGAATGGATGGAGTAAGATC+AGG | 0.513947 | 5.1:+49624537 | None:intergenic |
| CTGATCCAGATGTTGCTCCA+TGG | 0.515839 | 5.1:-49622288 | MS.gene64148:CDS |
| AGTAGGCTTTGGTCCTCGCC+AGG | 0.516067 | 5.1:-49622958 | MS.gene64148:intron |
| CCACCAAGTGGATGGAGAGA+AGG | 0.516532 | 5.1:+49627210 | None:intergenic |
| TCGCAAATGCGGTGGAAATG+AGG | 0.517351 | 5.1:-49623669 | MS.gene64148:CDS |
| TGCGGTGGAAATGAGGAGAA+AGG | 0.528919 | 5.1:-49623662 | MS.gene64148:CDS |
| TATTAGGTCAGCAGCATTAG+CGG | 0.531810 | 5.1:+49624845 | None:intergenic |
| GTGGCCCAAATGGTTCTATC+CGG | 0.536727 | 5.1:-49624376 | MS.gene64148:CDS |
| TAGGAGTCGATATCAAGCTC+TGG | 0.543537 | 5.1:-49624882 | MS.gene64148:CDS |
| AATGAGAACCACCAAGTGGA+TGG | 0.555144 | 5.1:+49627202 | None:intergenic |
| GCAGATCTCATCCAGTATGC+AGG | 0.556332 | 5.1:-49623901 | MS.gene64148:intron |
| ATCAGTGGGGTTTGTTCGAT+AGG | 0.556677 | 5.1:-49623079 | MS.gene64148:intron |
| AGACAGTTTCGCGGCTCCGT+TGG | 0.569239 | 5.1:+49622254 | None:intergenic |
| AATAAGTAGACCTGAAAACA+AGG | 0.576124 | 5.1:-49624004 | MS.gene64148:CDS |
| TGCATATGGATCAAATGGAC+AGG | 0.579849 | 5.1:-49623624 | MS.gene64148:intron |
| TGTTCGATAGGCAATTTGGT+AGG | 0.585772 | 5.1:-49623067 | MS.gene64148:CDS |
| TACTCCATCCATTCTAACAC+TGG | 0.586894 | 5.1:-49624529 | MS.gene64148:CDS |
| TGTAGCACAAAGTGCAACAA+AGG | 0.588580 | 5.1:-49623714 | MS.gene64148:intron |
| ATAGATTCATATTCCAAAGG+TGG | 0.598179 | 5.1:-49623937 | MS.gene64148:CDS |
| TCTGCAATTCGCAAATGCGG+TGG | 0.600496 | 5.1:-49623677 | MS.gene64148:CDS |
| TACTGACGAGGCAGATCCAG+AGG | 0.614094 | 5.1:-49623039 | MS.gene64148:CDS |
| GCTTCTGCAATTCGCAAATG+CGG | 0.614456 | 5.1:-49623680 | MS.gene64148:CDS |
| GAGATAGATTCATATTCCAA+AGG | 0.616050 | 5.1:-49623940 | MS.gene64148:CDS |
| CGGTTCGAGAGACAGTTTCG+CGG | 0.625711 | 5.1:+49622245 | None:intergenic |
| TGTTCTTAAATGCATTGGCG+TGG | 0.627346 | 5.1:-49626714 | MS.gene64148:CDS |
| AAACACTTACTGAACGAGGT+TGG | 0.637325 | 5.1:+49627154 | None:intergenic |
| AATGGTTCTTACCAAACCAA+TGG | 0.638356 | 5.1:+49626691 | None:intergenic |
| ATACTGGATGAGATCTGCAT+AGG | 0.640053 | 5.1:+49623906 | None:intergenic |
| TAAGTAGACCTGAAAACAAG+GGG | 0.641900 | 5.1:-49624002 | MS.gene64148:CDS |
| ATAAGTAGACCTGAAAACAA+GGG | 0.645785 | 5.1:-49624003 | MS.gene64148:CDS |
| ACTGACGAGGCAGATCCAGA+GGG | 0.648159 | 5.1:-49623038 | MS.gene64148:CDS |
| AACCAAACACTTACTGAACG+AGG | 0.658415 | 5.1:+49627150 | None:intergenic |
| GTAATGTCGATCTTCTTGCG+AGG | 0.665206 | 5.1:+49622026 | None:intergenic |
| TTGTAGGCAACGAAAACGGG+TGG | 0.681028 | 5.1:-49624395 | MS.gene64148:intron |
| CTGATCAGGACCTATGAATG+CGG | 0.688238 | 5.1:+49622336 | None:intergenic |
| AATATGGTAAGTACCTGGCG+AGG | 0.691514 | 5.1:+49622945 | None:intergenic |
| GGATAATGAGAACCACCAAG+TGG | 0.698522 | 5.1:+49627198 | None:intergenic |
| TGGTAGGACTGATACTGACG+AGG | 0.738100 | 5.1:-49623051 | MS.gene64148:CDS |
| CTGACGAGGCAGATCCAGAG+GGG | 0.738388 | 5.1:-49623037 | MS.gene64148:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATTATTATTAT+TGG | - | chr5.1:49624270-49624289 | MS.gene64148:intron | 0.0% |
| !! | AGAAAAAATATTATGATTAT+TGG | + | chr5.1:49625195-49625214 | None:intergenic | 10.0% |
| !!! | TAATTAATGTTTTATTTTCA+TGG | + | chr5.1:49623222-49623241 | None:intergenic | 10.0% |
| !!! | TTTATTATTGAAATTTTGAA+AGG | - | chr5.1:49626504-49626523 | MS.gene64148:intron | 10.0% |
| !! | AACATTAATTAATGTGAAAA+AGG | - | chr5.1:49623231-49623250 | MS.gene64148:intron | 15.0% |
| !! | AATGAGTTATATATTATTGT+TGG | + | chr5.1:49625839-49625858 | None:intergenic | 15.0% |
| !! | ACATTAATTAATGTGAAAAA+GGG | - | chr5.1:49623232-49623251 | MS.gene64148:intron | 15.0% |
| !! | ATAAGTATTATGTTTCAAAA+AGG | + | chr5.1:49625393-49625412 | None:intergenic | 15.0% |
| !! | TAAGTATTATGTTTCAAAAA+GGG | + | chr5.1:49625392-49625411 | None:intergenic | 15.0% |
| !!! | AATCAATTTTTGTTAAGAAT+AGG | - | chr5.1:49625464-49625483 | MS.gene64148:intron | 15.0% |
| !!! | CAAATTTTAGTATTTTGTAT+CGG | + | chr5.1:49625067-49625086 | None:intergenic | 15.0% |
| !!! | TAATGTAATTTTCCATATTT+TGG | - | chr5.1:49623673-49623692 | MS.gene64148:CDS | 15.0% |
| !!! | TAGTTATTTTCAAACTTTAT+TGG | - | chr5.1:49625946-49625965 | MS.gene64148:intron | 15.0% |
| !!! | TCATTTCATAAAATTTTTGT+AGG | + | chr5.1:49626071-49626090 | None:intergenic | 15.0% |
| !!! | TGTATTGACAAATTTTATTT+TGG | + | chr5.1:49622810-49622829 | None:intergenic | 15.0% |
| !! | AAAGACATAAAATAGAATGT+AGG | + | chr5.1:49626670-49626689 | None:intergenic | 20.0% |
| !! | AAATTTCAATAATAAAGAGC+AGG | + | chr5.1:49626500-49626519 | None:intergenic | 20.0% |
| !! | AAGACATAAAATAGAATGTA+GGG | + | chr5.1:49626669-49626688 | None:intergenic | 20.0% |
| !! | AAGTATTATGTTTCAAAAAG+GGG | + | chr5.1:49625391-49625410 | None:intergenic | 20.0% |
| !! | AATGAGTTATAAGTAAAATC+CGG | + | chr5.1:49625809-49625828 | None:intergenic | 20.0% |
| !! | AATTTCAATAATAAAGAGCA+GGG | + | chr5.1:49626499-49626518 | None:intergenic | 20.0% |
| !! | ATTATTGGATATGTATTTAG+TGG | - | chr5.1:49624303-49624322 | MS.gene64148:intron | 20.0% |
| !! | CATTAGAAAGTAGTTAAAAT+AGG | - | chr5.1:49624171-49624190 | MS.gene64148:intron | 20.0% |
| !! | CGATACAAAATACTAAAATT+TGG | - | chr5.1:49625065-49625084 | MS.gene64148:intron | 20.0% |
| !! | GCAATAATAGTGATAAAATA+TGG | + | chr5.1:49626327-49626346 | None:intergenic | 20.0% |
| !! | GGTAATAACATACATTAATA+TGG | - | chr5.1:49622741-49622760 | MS.gene64148:intron | 20.0% |
| !! | TAGTTAAAATAGGAAACTTA+GGG | - | chr5.1:49624181-49624200 | MS.gene64148:intron | 20.0% |
| !! | TATAACTTATGATCAAATCA+TGG | + | chr5.1:49622301-49622320 | None:intergenic | 20.0% |
| !! | TGCATTTCAATGATATAATT+TGG | - | chr5.1:49623883-49623902 | MS.gene64148:intron | 20.0% |
| !! | TGGTTAAAAAAAAAATCACT+TGG | - | chr5.1:49627102-49627121 | MS.gene64148:intron | 20.0% |
| !! | TGTCTAAAGATGTTTAAATT+TGG | + | chr5.1:49625728-49625747 | None:intergenic | 20.0% |
| !! | TTATATATTATTGTTGGAGA+GGG | + | chr5.1:49625833-49625852 | None:intergenic | 20.0% |
| !! | TTTAAACATCTTTAGACAAT+AGG | - | chr5.1:49625730-49625749 | MS.gene64148:intron | 20.0% |
| !! | TTTGATCATAAGTTATACTT+TGG | - | chr5.1:49622304-49622323 | MS.gene64148:CDS | 20.0% |
| !!! | AAATTTTATGAAATGATCCA+TGG | - | chr5.1:49626075-49626094 | MS.gene64148:intron | 20.0% |
| !!! | AACTAGTTTTATCTTATCAA+GGG | - | chr5.1:49623439-49623458 | MS.gene64148:intron | 20.0% |
| !!! | AATATTTCAGCTCAAATTTT+TGG | + | chr5.1:49624244-49624263 | None:intergenic | 20.0% |
| !!! | AATGTTAGTTTGATCTATTA+TGG | - | chr5.1:49625921-49625940 | MS.gene64148:intron | 20.0% |
| !!! | ATTGTTAATTTGAAACTCAA+TGG | - | chr5.1:49623913-49623932 | MS.gene64148:CDS | 20.0% |
| !!! | ATTTTCAAACTTTATTGGTA+AGG | - | chr5.1:49625951-49625970 | MS.gene64148:intron | 20.0% |
| !!! | GCTATATATATCTTTTTGAA+AGG | + | chr5.1:49623759-49623778 | None:intergenic | 20.0% |
| !!! | TGAATGATGATAATATGTTT+TGG | - | chr5.1:49622187-49622206 | MS.gene64148:intron | 20.0% |
| !!! | TTTTATCATTTTATAGACAC+TGG | + | chr5.1:49626621-49626640 | None:intergenic | 20.0% |
| ! | AATAAGCTCATATCCAAATT+CGG | + | chr5.1:49624669-49624688 | None:intergenic | 25.0% |
| ! | AATTATGTTCTCTGTCTATT+TGG | - | chr5.1:49626877-49626896 | MS.gene64148:intron | 25.0% |
| ! | AATTCAAAAACCAACATACA+AGG | + | chr5.1:49625894-49625913 | None:intergenic | 25.0% |
| ! | AATTTCAGTGTAAGATTCTT+AGG | - | chr5.1:49624450-49624469 | MS.gene64148:intron | 25.0% |
| ! | ACATACATTAATATGGAAAG+TGG | - | chr5.1:49622748-49622767 | MS.gene64148:intron | 25.0% |
| ! | AGATAAAGTCAATGTATGTT+TGG | - | chr5.1:49622240-49622259 | MS.gene64148:CDS | 25.0% |
| ! | ATATGTATGCGAAACATATA+CGG | + | chr5.1:49625419-49625438 | None:intergenic | 25.0% |
| ! | ATATTACAATGTCCTTTCTT+AGG | - | chr5.1:49622144-49622163 | MS.gene64148:intron | 25.0% |
| ! | ATATTATGTACACCTAAGAA+AGG | + | chr5.1:49622159-49622178 | None:intergenic | 25.0% |
| ! | ATTACCTCTATTTATCAAAG+TGG | + | chr5.1:49622727-49622746 | None:intergenic | 25.0% |
| ! | CATTAATATGTCAAACTCAA+TGG | - | chr5.1:49624492-49624511 | MS.gene64148:intron | 25.0% |
| ! | GAGTGTTTATAAACTATCAT+TGG | - | chr5.1:49622947-49622966 | MS.gene64148:intron | 25.0% |
| ! | GTAGTTAAAATAGGAAACTT+AGG | - | chr5.1:49624180-49624199 | MS.gene64148:intron | 25.0% |
| ! | GTTATATATTATTGTTGGAG+AGG | + | chr5.1:49625834-49625853 | None:intergenic | 25.0% |
| ! | TACATCTATGTTAACATCAT+TGG | + | chr5.1:49624939-49624958 | None:intergenic | 25.0% |
| ! | TAGAAAAGAAATTGCAATCT+TGG | - | chr5.1:49626551-49626570 | MS.gene64148:intron | 25.0% |
| ! | TAGTAAAATACAGAGAAAAC+TGG | + | chr5.1:49623651-49623670 | None:intergenic | 25.0% |
| ! | TATATATTATTGTTGGAGAG+GGG | + | chr5.1:49625832-49625851 | None:intergenic | 25.0% |
| ! | TCAAAGTTTGATATGCTATA+GGG | - | chr5.1:49626462-49626481 | MS.gene64148:intron | 25.0% |
| ! | TGATCAAGATGAAAATATGA+TGG | + | chr5.1:49624220-49624239 | None:intergenic | 25.0% |
| ! | TGTTGTTCAAATGTATTGTT+AGG | - | chr5.1:49622443-49622462 | MS.gene64148:intron | 25.0% |
| ! | TTCAAAGTTTGATATGCTAT+AGG | - | chr5.1:49626461-49626480 | MS.gene64148:intron | 25.0% |
| ! | TTCTTACAGCTCAAATTAAA+GGG | - | chr5.1:49624547-49624566 | MS.gene64148:intron | 25.0% |
| ! | TTGACATATTAATGATCACA+TGG | + | chr5.1:49624486-49624505 | None:intergenic | 25.0% |
| ! | TTGTAAAATGACAACTGAAT+CGG | + | chr5.1:49626710-49626729 | None:intergenic | 25.0% |
| ! | TTGTAAAGACAAAACTGTAA+GGG | + | chr5.1:49623090-49623109 | None:intergenic | 25.0% |
| !! | AAAGATAAATTTTCTGCAGT+AGG | - | chr5.1:49626278-49626297 | MS.gene64148:intron | 25.0% |
| !! | AATGTAGGGAATATAGTTTT+TGG | + | chr5.1:49626655-49626674 | None:intergenic | 25.0% |
| !! | ATTTCTTTTCTATATACAGG+TGG | + | chr5.1:49626543-49626562 | None:intergenic | 25.0% |
| !! | CTTACAAACAAAGCATTATT+AGG | + | chr5.1:49623789-49623808 | None:intergenic | 25.0% |
| !! | GCAATTTCTTTTCTATATAC+AGG | + | chr5.1:49626546-49626565 | None:intergenic | 25.0% |
| !! | TAGTACTATTAACCAGATTT+TGG | + | chr5.1:49625679-49625698 | None:intergenic | 25.0% |
| !!! | ACGGTTTTATCCTTAAAATA+CGG | - | chr5.1:49622904-49622923 | MS.gene64148:intron | 25.0% |
| !!! | ATAGTTAATTTTTTGTCCCA+AGG | + | chr5.1:49627192-49627211 | None:intergenic | 25.0% |
| !!! | ATTGATTTGATGATGAGTTT+CGG | - | chr5.1:49624331-49624350 | MS.gene64148:intron | 25.0% |
| !!! | CAACTAGTTTTATCTTATCA+AGG | - | chr5.1:49623438-49623457 | MS.gene64148:intron | 25.0% |
| !!! | TTAATCTCAACCATTGATTT+TGG | - | chr5.1:49623976-49623995 | MS.gene64148:CDS | 25.0% |
| !!! | TTGTTTTGCGATATACTATT+TGG | - | chr5.1:49626751-49626770 | MS.gene64148:CDS | 25.0% |
| AAGAACCATTCTGATTCTTT+GGG | - | chr5.1:49622575-49622594 | MS.gene64148:intron | 30.0% | |
| AAGTCTGTTGTCAAAAACAA+AGG | - | chr5.1:49624113-49624132 | MS.gene64148:intron | 30.0% | |
| AATAAGTAGACCTGAAAACA+AGG | - | chr5.1:49625249-49625268 | MS.gene64148:intron | 30.0% | |
| AATGAAGACAATAAAGTCAG+TGG | + | chr5.1:49625518-49625537 | None:intergenic | 30.0% | |
| AATTTACTCTACACTGCATA+TGG | - | chr5.1:49625615-49625634 | MS.gene64148:intron | 30.0% | |
| AGAGAATAGAATTCCGAATT+TGG | - | chr5.1:49624653-49624672 | MS.gene64148:intron | 30.0% | |
| AGAGATGTTCTTAAATGCAT+TGG | - | chr5.1:49622534-49622553 | MS.gene64148:intron | 30.0% | |
| AGCTATACTTACCTCATAAT+CGG | + | chr5.1:49627031-49627050 | None:intergenic | 30.0% | |
| ATAAGTAGACCTGAAAACAA+GGG | - | chr5.1:49625250-49625269 | MS.gene64148:intron | 30.0% | |
| ATAGATTCATATTCCAAAGG+TGG | - | chr5.1:49625316-49625335 | MS.gene64148:intron | 30.0% | |
| ATGAAGAAGAACAGTTCAAT+TGG | - | chr5.1:49622505-49622524 | MS.gene64148:intron | 30.0% | |
| ATTCATACAAGCAAAGAATG+AGG | + | chr5.1:49625160-49625179 | None:intergenic | 30.0% | |
| CAAAAGAGATGCTTGATATT+GGG | - | chr5.1:49622781-49622800 | MS.gene64148:intron | 30.0% | |
| CATAAAGTCTCAAACTGTTT+GGG | + | chr5.1:49622985-49623004 | None:intergenic | 30.0% | |
| CTTGTAAAGACAAAACTGTA+AGG | + | chr5.1:49623091-49623110 | None:intergenic | 30.0% | |
| GAGATAGATTCATATTCCAA+AGG | - | chr5.1:49625313-49625332 | MS.gene64148:intron | 30.0% | |
| GATAAAATATGGTAAGTACC+TGG | + | chr5.1:49626316-49626335 | None:intergenic | 30.0% | |
| GGGACAAAAAATTAACTATG+AGG | - | chr5.1:49627193-49627212 | MS.gene64148:CDS | 30.0% | |
| GTCTTTACAAGATGTCTTAA+TGG | - | chr5.1:49623100-49623119 | MS.gene64148:intron | 30.0% | |
| GTTCTTACAGCTCAAATTAA+AGG | - | chr5.1:49624546-49624565 | MS.gene64148:CDS | 30.0% | |
| TAAGAACCATTCTGATTCTT+TGG | - | chr5.1:49622574-49622593 | MS.gene64148:intron | 30.0% | |
| TAGAAATCTTCCTTGTATGT+TGG | - | chr5.1:49625881-49625900 | MS.gene64148:intron | 30.0% | |
| TAGTATAACAACCTCACAAT+TGG | + | chr5.1:49623307-49623326 | None:intergenic | 30.0% | |
| TAGTCACTAATTGAAGCTAA+GGG | - | chr5.1:49623017-49623036 | MS.gene64148:CDS | 30.0% | |
| TATCGCAAAACAATAGCAAT+TGG | + | chr5.1:49626744-49626763 | None:intergenic | 30.0% | |
| TCAATGTATGTTTGGATTGA+CGG | - | chr5.1:49622248-49622267 | MS.gene64148:CDS | 30.0% | |
| TCAGTTCAAAGAATACATAC+TGG | + | chr5.1:49623335-49623354 | None:intergenic | 30.0% | |
| TGCTTCCTCTATAAAATTCA+AGG | + | chr5.1:49625287-49625306 | None:intergenic | 30.0% | |
| TGGAATCTTCTTAAGTTTGT+AGG | - | chr5.1:49624842-49624861 | MS.gene64148:CDS | 30.0% | |
| TGTCTTTCATCGTTATTGAT+TGG | - | chr5.1:49624822-49624841 | MS.gene64148:CDS | 30.0% | |
| TTCAAAGAATACATACTGGT+TGG | + | chr5.1:49623331-49623350 | None:intergenic | 30.0% | |
| TTCACAAAATTGAGTACCTT+GGG | - | chr5.1:49627173-49627192 | MS.gene64148:CDS | 30.0% | |
| TTGACAACACTACTAAATAG+CGG | - | chr5.1:49626417-49626436 | MS.gene64148:intron | 30.0% | |
| TTGTCAAATAGTCGTTATTG+CGG | + | chr5.1:49626404-49626423 | None:intergenic | 30.0% | |
| TTTATGAAATGATCCATGGA+TGG | - | chr5.1:49626079-49626098 | MS.gene64148:intron | 30.0% | |
| TTTCACAAAATTGAGTACCT+TGG | - | chr5.1:49627172-49627191 | MS.gene64148:CDS | 30.0% | |
| ! | AACAGTTAGTCTGCTAAATA+AGG | - | chr5.1:49624978-49624997 | MS.gene64148:intron | 30.0% |
| ! | AATCACTTGGTAATTCTCTT+TGG | - | chr5.1:49627115-49627134 | MS.gene64148:intron | 30.0% |
| ! | ATTTTATAGACACTGGATAG+GGG | + | chr5.1:49626614-49626633 | None:intergenic | 30.0% |
| ! | CAGTTACTGAAACTTTTGTT+TGG | - | chr5.1:49627082-49627101 | MS.gene64148:intron | 30.0% |
| ! | CATTTTATAGACACTGGATA+GGG | + | chr5.1:49626615-49626634 | None:intergenic | 30.0% |
| ! | TCATTTTATAGACACTGGAT+AGG | + | chr5.1:49626616-49626635 | None:intergenic | 30.0% |
| ! | TTCTGTTCTTTTCCAAAATC+TGG | - | chr5.1:49625664-49625683 | MS.gene64148:intron | 30.0% |
| !! | AAAAACAAAAGTACCTGAAC+CGG | + | chr5.1:49624899-49624918 | None:intergenic | 30.0% |
| !! | ATTTTAAGGATAAAACCGTG+AGG | + | chr5.1:49622903-49622922 | None:intergenic | 30.0% |
| !! | TATCCATTTTTCACTTGAAG+AGG | + | chr5.1:49626004-49626023 | None:intergenic | 30.0% |
| !! | TTTGATTTTCGTACAGCAAA+TGG | + | chr5.1:49622472-49622491 | None:intergenic | 30.0% |
| !! | TTTGGTTTGTTATCTTTCTC+AGG | - | chr5.1:49627133-49627152 | MS.gene64148:intron | 30.0% |
| !!! | AGGATATTTTAGTAACGCAT+AGG | - | chr5.1:49625750-49625769 | MS.gene64148:intron | 30.0% |
| !!! | TAGTATTTTGTATCGGCTAT+AGG | + | chr5.1:49625060-49625079 | None:intergenic | 30.0% |
| AACCCAAAGTCAATAACTCT+TGG | - | chr5.1:49623612-49623631 | MS.gene64148:intron | 35.0% | |
| AAGAATAGGCTAGAAGTTGT+AGG | - | chr5.1:49625478-49625497 | MS.gene64148:intron | 35.0% | |
| AAGTTTGTAGGCAACGAAAA+CGG | - | chr5.1:49624854-49624873 | MS.gene64148:CDS | 35.0% | |
| AATGGTTCTTACCAAACCAA+TGG | + | chr5.1:49622565-49622584 | None:intergenic | 35.0% | |
| ACATTCAATGTTGTCAATCG+TGG | + | chr5.1:49626853-49626872 | None:intergenic | 35.0% | |
| AGAACCATTCTGATTCTTTG+GGG | - | chr5.1:49622576-49622595 | MS.gene64148:intron | 35.0% | |
| AGCTGCTAAAAGCTATAAGA+AGG | + | chr5.1:49624051-49624070 | None:intergenic | 35.0% | |
| AGTCACTAATTGAAGCTAAG+GGG | - | chr5.1:49623018-49623037 | MS.gene64148:CDS | 35.0% | |
| ATAGTTGCGGAACCAAAATA+TGG | + | chr5.1:49623688-49623707 | None:intergenic | 35.0% | |
| ATGAGATCTGCATAGGAAAT+AGG | + | chr5.1:49625343-49625362 | None:intergenic | 35.0% | |
| CAAATAAATCAGCAGCTTCT+TGG | + | chr5.1:49623527-49623546 | None:intergenic | 35.0% | |
| CAGACAATGTTTCAGAAAAG+TGG | + | chr5.1:49622861-49622880 | None:intergenic | 35.0% | |
| CATGGGTACAAAAATACCAA+CGG | - | chr5.1:49626983-49627002 | MS.gene64148:intron | 35.0% | |
| CCATAAAGTCTCAAACTGTT+TGG | + | chr5.1:49622986-49623005 | None:intergenic | 35.0% | |
| CTAAGTAACACAAGACTTTC+TGG | - | chr5.1:49623167-49623186 | MS.gene64148:intron | 35.0% | |
| GACGCTATATACAGCAATAA+AGG | - | chr5.1:49624569-49624588 | MS.gene64148:intron | 35.0% | |
| GATTATGCAAAATCGTCTCT+TGG | + | chr5.1:49624086-49624105 | None:intergenic | 35.0% | |
| GCAAAAGAGATGCTTGATAT+TGG | - | chr5.1:49622780-49622799 | MS.gene64148:intron | 35.0% | |
| GCTAAAAGCTATAAGAAGGT+GGG | + | chr5.1:49624047-49624066 | None:intergenic | 35.0% | |
| GTAGTCACTAATTGAAGCTA+AGG | - | chr5.1:49623016-49623035 | MS.gene64148:CDS | 35.0% | |
| TAAGTAGACCTGAAAACAAG+GGG | - | chr5.1:49625251-49625270 | MS.gene64148:intron | 35.0% | |
| TACACTGCATATGGATCAAA+TGG | - | chr5.1:49625624-49625643 | MS.gene64148:intron | 35.0% | |
| TCACTAGATGTATTCTTTGC+CGG | - | chr5.1:49625787-49625806 | MS.gene64148:intron | 35.0% | |
| TGCTAAAAGCTATAAGAAGG+TGG | + | chr5.1:49624048-49624067 | None:intergenic | 35.0% | |
| TGGTTAAGTGCCAAAATCAA+TGG | + | chr5.1:49623989-49624008 | None:intergenic | 35.0% | |
| TTACATGGTCATGTTAGTGA+AGG | + | chr5.1:49626133-49626152 | None:intergenic | 35.0% | |
| TTCGTGAGTTCTACTATTCT+AGG | + | chr5.1:49623827-49623846 | None:intergenic | 35.0% | |
| TTGCATTTACTGAATGGTTG+TGG | - | chr5.1:49624606-49624625 | MS.gene64148:intron | 35.0% | |
| TTTGATCTCAACCAATTGTG+AGG | - | chr5.1:49623293-49623312 | MS.gene64148:intron | 35.0% | |
| ! | AAATTTTCTGCAGTAGGCTT+TGG | - | chr5.1:49626284-49626303 | MS.gene64148:intron | 35.0% |
| ! | AATTTTCGTTGTGGATCAGT+GGG | - | chr5.1:49626160-49626179 | MS.gene64148:intron | 35.0% |
| ! | ACTCATTGAGCCGTATTTTA+AGG | + | chr5.1:49622917-49622936 | None:intergenic | 35.0% |
| ! | CCAAACAGTTTGAGACTTTA+TGG | - | chr5.1:49622983-49623002 | MS.gene64148:CDS | 35.0% |
| ! | CGATGCTTTGACTTATGATA+AGG | - | chr5.1:49624754-49624773 | MS.gene64148:intron | 35.0% |
| ! | CTTTGTTTGTAAGCTTGTGA+TGG | - | chr5.1:49623796-49623815 | MS.gene64148:intron | 35.0% |
| ! | GGTACTCAATTTTGTGAAAG+TGG | + | chr5.1:49627171-49627190 | None:intergenic | 35.0% |
| ! | TGCAGCCTTGAATTTTATAG+AGG | - | chr5.1:49625279-49625298 | MS.gene64148:intron | 35.0% |
| ! | TTGGCCACTTTGATAAATAG+AGG | - | chr5.1:49622720-49622739 | MS.gene64148:intron | 35.0% |
| !! | CAGAAAGTCTTGTGTTACTT+AGG | + | chr5.1:49623169-49623188 | None:intergenic | 35.0% |
| !! | CGGTTAGTTTGATAGAATCA+CGG | - | chr5.1:49622268-49622287 | MS.gene64148:CDS | 35.0% |
| !! | TGCCAAGAGTTATTGACTTT+GGG | + | chr5.1:49623617-49623636 | None:intergenic | 35.0% |
| !! | TGTCTGGTTGAAGTTGTTTT+TGG | + | chr5.1:49622079-49622098 | None:intergenic | 35.0% |
| !! | TTTCTAAACTCTAAAGCCAG+TGG | + | chr5.1:49625867-49625886 | None:intergenic | 35.0% |
| !!! | AGGGAATATAGTTTTTGGCA+CGG | + | chr5.1:49626650-49626669 | None:intergenic | 35.0% |
| AAACACTTACTGAACGAGGT+TGG | + | chr5.1:49622102-49622121 | None:intergenic | 40.0% | |
| AAATACGGCTCAATGAGTTG+TGG | - | chr5.1:49622919-49622938 | MS.gene64148:intron | 40.0% | |
| AACCAAACACTTACTGAACG+AGG | + | chr5.1:49622106-49622125 | None:intergenic | 40.0% | |
| AACCTCGTTCAGTAAGTGTT+TGG | - | chr5.1:49622101-49622120 | MS.gene64148:CDS | 40.0% | |
| AAGCAGGCAATACCTCATAA+AGG | + | chr5.1:49623052-49623071 | None:intergenic | 40.0% | |
| AAGGAAGAGTTGAGATTGAG+AGG | + | chr5.1:49622027-49622046 | None:intergenic | 40.0% | |
| AATTGTGTCCGTAGTTGGTT+CGG | + | chr5.1:49623197-49623216 | None:intergenic | 40.0% | |
| ACAACTCGTCTTCTTGGATT+TGG | - | chr5.1:49623846-49623865 | MS.gene64148:intron | 40.0% | |
| ACACTTGCTTTCTCCCAAAT+TGG | + | chr5.1:49626248-49626267 | None:intergenic | 40.0% | |
| ACATATTCCATCCTCTCAAG+TGG | - | chr5.1:49623559-49623578 | MS.gene64148:intron | 40.0% | |
| AGAATGGATGGAGTAAGATC+AGG | + | chr5.1:49624719-49624738 | None:intergenic | 40.0% | |
| AGACCTGTAATGCAGAGAAT+TGG | - | chr5.1:49622701-49622720 | MS.gene64148:intron | 40.0% | |
| AGAGGGGAGAATTCCAATTT+GGG | - | chr5.1:49626232-49626251 | MS.gene64148:intron | 40.0% | |
| AGTTTGTAGGCAACGAAAAC+GGG | - | chr5.1:49624855-49624874 | MS.gene64148:CDS | 40.0% | |
| ATAAATCAGCAGCTTCTTGG+AGG | + | chr5.1:49623524-49623543 | None:intergenic | 40.0% | |
| ATACTGGATGAGATCTGCAT+AGG | + | chr5.1:49625350-49625369 | None:intergenic | 40.0% | |
| ATAGGAAATAGGTCCACCTT+TGG | + | chr5.1:49625332-49625351 | None:intergenic | 40.0% | |
| ATCTGGATCAGATGCCAATA+AGG | + | chr5.1:49626956-49626975 | None:intergenic | 40.0% | |
| CACTGATCCACAACGAAAAT+TGG | + | chr5.1:49626161-49626180 | None:intergenic | 40.0% | |
| CATACCAAACTCTAACTCAC+AGG | - | chr5.1:49623405-49623424 | MS.gene64148:intron | 40.0% | |
| CGAAAATTGGACGTGTTACA+TGG | + | chr5.1:49626148-49626167 | None:intergenic | 40.0% | |
| CTTGTGAACATTTCCATCCA+TGG | + | chr5.1:49626095-49626114 | None:intergenic | 40.0% | |
| GAAATGTTCAACCTGCATAC+TGG | + | chr5.1:49625366-49625385 | None:intergenic | 40.0% | |
| GATCCCTTCAAAGATAGTTG+CGG | + | chr5.1:49623701-49623720 | None:intergenic | 40.0% | |
| GCTATAGGCTATAGACATAG+CGG | + | chr5.1:49625045-49625064 | None:intergenic | 40.0% | |
| GCTCACATAAAAACCAAAGC+AGG | + | chr5.1:49623068-49623087 | None:intergenic | 40.0% | |
| GGAAAAGAGAACATGCTCAT+GGG | - | chr5.1:49623253-49623272 | MS.gene64148:intron | 40.0% | |
| GGCAAAGAATACATCTAGTG+AGG | + | chr5.1:49625788-49625807 | None:intergenic | 40.0% | |
| GTTCCGCAACTATCTTTGAA+GGG | - | chr5.1:49623695-49623714 | MS.gene64148:CDS | 40.0% | |
| TACTCCATCCATTCTAACAC+TGG | - | chr5.1:49624724-49624743 | MS.gene64148:intron | 40.0% | |
| TATAACTCATTCCCTTCCAC+TGG | - | chr5.1:49625848-49625867 | MS.gene64148:intron | 40.0% | |
| TATTAGGTCAGCAGCATTAG+CGG | + | chr5.1:49624411-49624430 | None:intergenic | 40.0% | |
| TCGACGTTTGATATCTCTTC+AGG | - | chr5.1:49624688-49624707 | MS.gene64148:CDS | 40.0% | |
| TCGCTGATCGCAAAAAATAG+AGG | - | chr5.1:49626360-49626379 | MS.gene64148:intron | 40.0% | |
| TCGGAATTCTATTCTCTAGC+TGG | + | chr5.1:49624650-49624669 | None:intergenic | 40.0% | |
| TCTCTGTCTATTTGGATAGC+TGG | - | chr5.1:49626885-49626904 | MS.gene64148:intron | 40.0% | |
| TGAACCGGATAGAACCATTT+GGG | + | chr5.1:49624884-49624903 | None:intergenic | 40.0% | |
| TGCATATGGATCAAATGGAC+AGG | - | chr5.1:49625629-49625648 | MS.gene64148:intron | 40.0% | |
| TGGTTAATTGTGTCCGTAGT+TGG | + | chr5.1:49623202-49623221 | None:intergenic | 40.0% | |
| TGTAGCACAAAGTGCAACAA+AGG | - | chr5.1:49625539-49625558 | MS.gene64148:intron | 40.0% | |
| TGTTCGATAGGCAATTTGGT+AGG | - | chr5.1:49626186-49626205 | MS.gene64148:intron | 40.0% | |
| ! | AACACGTCCAATTTTCGTTG+TGG | - | chr5.1:49626151-49626170 | MS.gene64148:intron | 40.0% |
| ! | ATGCTCATGGGCTTTTATAC+TGG | - | chr5.1:49623265-49623284 | MS.gene64148:intron | 40.0% |
| ! | ATTTTCGTTGTGGATCAGTG+GGG | - | chr5.1:49626161-49626180 | MS.gene64148:intron | 40.0% |
| ! | CAATTTTCGTTGTGGATCAG+TGG | - | chr5.1:49626159-49626178 | MS.gene64148:intron | 40.0% |
| ! | GGTTTGTTCGATAGGCAATT+TGG | - | chr5.1:49626182-49626201 | MS.gene64148:intron | 40.0% |
| ! | GTTTAGAGCCAGTGTTAGAA+TGG | + | chr5.1:49624735-49624754 | None:intergenic | 40.0% |
| ! | TGTTCTTAAATGCATTGGCG+TGG | - | chr5.1:49622539-49622558 | MS.gene64148:intron | 40.0% |
| !! | AAACTCTAAAGCCAGTGGAA+GGG | + | chr5.1:49625862-49625881 | None:intergenic | 40.0% |
| !! | CGTTGGTATTTTTGTACCCA+TGG | + | chr5.1:49626985-49627004 | None:intergenic | 40.0% |
| !! | CTGCCAAGAGTTATTGACTT+TGG | + | chr5.1:49623618-49623637 | None:intergenic | 40.0% |
| !! | CTTGGATTTGGCTCTTCTAA+GGG | - | chr5.1:49623858-49623877 | MS.gene64148:intron | 40.0% |
| !! | GCTGACTTGCATTTACTGAA+TGG | - | chr5.1:49624600-49624619 | MS.gene64148:intron | 40.0% |
| !! | TAAACTCTAAAGCCAGTGGA+AGG | + | chr5.1:49625863-49625882 | None:intergenic | 40.0% |
| !! | TCTTGGATTTGGCTCTTCTA+AGG | - | chr5.1:49623857-49623876 | MS.gene64148:intron | 40.0% |
| !! | TGAACAATCGCTATTGACTC+TGG | + | chr5.1:49626445-49626464 | None:intergenic | 40.0% |
| !! | TTATGAGGTATTGCCTGCTT+TGG | - | chr5.1:49623052-49623071 | MS.gene64148:CDS | 40.0% |
| !! | TTGGATTTGGCTCTTCTAAG+GGG | - | chr5.1:49623859-49623878 | MS.gene64148:intron | 40.0% |
| !! | TTGGTATGAGAGTGTTTGCT+AGG | + | chr5.1:49623393-49623412 | None:intergenic | 40.0% |
| AATGAGAACCACCAAGTGGA+TGG | + | chr5.1:49622054-49622073 | None:intergenic | 45.0% | |
| ACCACCCCAAAGAATCAGAA+TGG | + | chr5.1:49622583-49622602 | None:intergenic | 45.0% | |
| AGAGCCAGTGTTAGAATGGA+TGG | + | chr5.1:49624731-49624750 | None:intergenic | 45.0% | |
| AGCAAGTGATGCACTCTAGT+TGG | + | chr5.1:49624009-49624028 | None:intergenic | 45.0% | |
| CAAATTGGAATTCTCCCCTC+TGG | + | chr5.1:49626233-49626252 | None:intergenic | 45.0% | |
| CAGAGGGGAGAATTCCAATT+TGG | - | chr5.1:49626231-49626250 | MS.gene64148:intron | 45.0% | |
| CAGGCAATACCTCATAAAGG+TGG | + | chr5.1:49623049-49623068 | None:intergenic | 45.0% | |
| CTGAACCGGATAGAACCATT+TGG | + | chr5.1:49624885-49624904 | None:intergenic | 45.0% | |
| CTGATCAGGACCTATGAATG+CGG | + | chr5.1:49626920-49626939 | None:intergenic | 45.0% | |
| GAGTCTAATGTGAGTCCTCA+CGG | - | chr5.1:49622885-49622904 | MS.gene64148:intron | 45.0% | |
| GAGTGCATCACTTGCTTTAG+AGG | - | chr5.1:49624013-49624032 | MS.gene64148:CDS | 45.0% | |
| GCGCCTCTTCAAGTGAAAAA+TGG | - | chr5.1:49625998-49626017 | MS.gene64148:intron | 45.0% | |
| GCTTCTGCAATTCGCAAATG+CGG | - | chr5.1:49625573-49625592 | MS.gene64148:intron | 45.0% | |
| GGATAATGAGAACCACCAAG+TGG | + | chr5.1:49622058-49622077 | None:intergenic | 45.0% | |
| GGATGCAACAGAGACCTTAT+TGG | - | chr5.1:49626939-49626958 | MS.gene64148:intron | 45.0% | |
| GGGAAAAGAGAACATGCTCA+TGG | - | chr5.1:49623252-49623271 | MS.gene64148:intron | 45.0% | |
| GGTCAGTTGCATCTGTTTGT+AGG | - | chr5.1:49624352-49624371 | MS.gene64148:intron | 45.0% | |
| GGTTCCGCAACTATCTTTGA+AGG | - | chr5.1:49623694-49623713 | MS.gene64148:CDS | 45.0% | |
| GTAATGTCGATCTTCTTGCG+AGG | + | chr5.1:49627230-49627249 | None:intergenic | 45.0% | |
| TAGGAGTCGATATCAAGCTC+TGG | - | chr5.1:49624371-49624390 | MS.gene64148:CDS | 45.0% | |
| TCACGAACAACTCGTCTTCT+TGG | - | chr5.1:49623840-49623859 | MS.gene64148:intron | 45.0% | |
| TCGTGGATCGCAGAAAATAG+CGG | + | chr5.1:49626836-49626855 | None:intergenic | 45.0% | |
| TCTACATAGAGCCACTTGAG+AGG | + | chr5.1:49623573-49623592 | None:intergenic | 45.0% | |
| TGATCCAGATGTTGCTCCAT+GGG | - | chr5.1:49626966-49626985 | MS.gene64148:intron | 45.0% | |
| TGGCCAATTCTCTGCATTAC+AGG | + | chr5.1:49622707-49622726 | None:intergenic | 45.0% | |
| TGTCTCTCGAACCGATTATG+AGG | - | chr5.1:49627017-49627036 | MS.gene64148:intron | 45.0% | |
| TTGGGAGAAAGCAAGTGTTC+AGG | - | chr5.1:49626250-49626269 | MS.gene64148:intron | 45.0% | |
| ! | AACTAGCTTGGAGAGCTACA+TGG | + | chr5.1:49623359-49623378 | None:intergenic | 45.0% |
| ! | ACCATTCTGATTCTTTGGGG+TGG | - | chr5.1:49622579-49622598 | MS.gene64148:intron | 45.0% |
| ! | ATCAGTGGGGTTTGTTCGAT+AGG | - | chr5.1:49626174-49626193 | MS.gene64148:intron | 45.0% |
| ! | CAAATGGTTCTATCCGGTTC+AGG | - | chr5.1:49624883-49624902 | MS.gene64148:intron | 45.0% |
| ! | GGAGGTTAGAGCTTGTTTGA+AGG | + | chr5.1:49623506-49623525 | None:intergenic | 45.0% |
| !! | TTCTGATTCTTTGGGGTGGT+TGG | - | chr5.1:49622583-49622602 | MS.gene64148:intron | 45.0% |
| AGCGCTGTCTGCGTTCTATT+AGG | + | chr5.1:49624427-49624446 | None:intergenic | 50.0% | |
| CATAGAGCCACTTGAGAGGA+TGG | + | chr5.1:49623569-49623588 | None:intergenic | 50.0% | |
| CCAAACTCTAACTCACAGGC+TGG | - | chr5.1:49623409-49623428 | MS.gene64148:intron | 50.0% | |
| CCAGCCTGTGAGTTAGAGTT+TGG | + | chr5.1:49623412-49623431 | None:intergenic | 50.0% | |
| CGCATTCATAGGTCCTGATC+AGG | - | chr5.1:49626918-49626937 | MS.gene64148:intron | 50.0% | |
| CTGATCCAGATGTTGCTCCA+TGG | - | chr5.1:49626965-49626984 | MS.gene64148:intron | 50.0% | |
| CTGGTGTACCGAACCAACTA+CGG | - | chr5.1:49623186-49623205 | MS.gene64148:intron | 50.0% | |
| CTTCCTTCTCTCCATCCACT+TGG | - | chr5.1:49622040-49622059 | MS.gene64148:CDS | 50.0% | |
| GCAGATCTCATCCAGTATGC+AGG | - | chr5.1:49625352-49625371 | MS.gene64148:intron | 50.0% | |
| GCGGTGGAAATGAGGAGAAA+GGG | - | chr5.1:49625592-49625611 | MS.gene64148:intron | 50.0% | |
| GCTGTGTTGTCCGCATTCAT+AGG | - | chr5.1:49626907-49626926 | MS.gene64148:intron | 50.0% | |
| GTCTCTGTTGCATCCTGATC+AGG | + | chr5.1:49626934-49626953 | None:intergenic | 50.0% | |
| TCGCAAATGCGGTGGAAATG+AGG | - | chr5.1:49625584-49625603 | MS.gene64148:intron | 50.0% | |
| TCTGCAATTCGCAAATGCGG+TGG | - | chr5.1:49625576-49625595 | MS.gene64148:intron | 50.0% | |
| TGCGGTGGAAATGAGGAGAA+AGG | - | chr5.1:49625591-49625610 | MS.gene64148:intron | 50.0% | |
| TGGTAGGACTGATACTGACG+AGG | - | chr5.1:49626202-49626221 | MS.gene64148:intron | 50.0% | |
| TGTACCCATGGAGCAACATC+TGG | + | chr5.1:49626973-49626992 | None:intergenic | 50.0% | |
| TTGTAGGCAACGAAAACGGG+TGG | - | chr5.1:49624858-49624877 | MS.gene64148:CDS | 50.0% | |
| ! | AAATGCATTGGCGTGGCCAT+TGG | - | chr5.1:49622546-49622565 | MS.gene64148:intron | 50.0% |
| ! | AGAGTGTTTGCTAGGAGCTG+TGG | + | chr5.1:49623385-49623404 | None:intergenic | 50.0% |
| ! | GTGGCCCAAATGGTTCTATC+CGG | - | chr5.1:49624877-49624896 | MS.gene64148:CDS | 50.0% |
| !! | TACTGAACGAGGTTGGTGTC+TGG | + | chr5.1:49622095-49622114 | None:intergenic | 50.0% |
| !!! | GCAGAAAGCCCCTTGTTTTC+AGG | + | chr5.1:49625262-49625281 | None:intergenic | 50.0% |
| ACGAAAACGGGTGGCCCAAA+TGG | - | chr5.1:49624867-49624886 | MS.gene64148:CDS | 55.0% | |
| ACTGACGAGGCAGATCCAGA+GGG | - | chr5.1:49626215-49626234 | MS.gene64148:intron | 55.0% | |
| CAGCAGCATTAGCGGTTCCA+AGG | + | chr5.1:49624403-49624422 | None:intergenic | 55.0% | |
| CCACCAAGTGGATGGAGAGA+AGG | + | chr5.1:49622046-49622065 | None:intergenic | 55.0% | |
| CCTTCTCTCCATCCACTTGG+TGG | - | chr5.1:49622043-49622062 | MS.gene64148:CDS | 55.0% | |
| CGGTTCGAGAGACAGTTTCG+CGG | + | chr5.1:49627011-49627030 | None:intergenic | 55.0% | |
| GAGCTGTGGCGTAACTAGCT+TGG | + | chr5.1:49623371-49623390 | None:intergenic | 55.0% | |
| TACTGACGAGGCAGATCCAG+AGG | - | chr5.1:49626214-49626233 | MS.gene64148:intron | 55.0% | |
| ! | CATTGGCGTGGCCATTGGTT+TGG | - | chr5.1:49622551-49622570 | MS.gene64148:intron | 55.0% |
| !! | TCAAGCTCTGGATCGCTCCT+TGG | - | chr5.1:49624383-49624402 | MS.gene64148:CDS | 55.0% |
| AGACAGTTTCGCGGCTCCGT+TGG | + | chr5.1:49627002-49627021 | None:intergenic | 60.0% | |
| CTGACGAGGCAGATCCAGAG+GGG | - | chr5.1:49626216-49626235 | MS.gene64148:intron | 60.0% | |
| GGGGCTGCACCACCTTTATG+AGG | - | chr5.1:49623037-49623056 | MS.gene64148:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 49622010 | 49627265 | 49622010 | ID=MS.gene64148 |
| chr5.1 | mRNA | 49622010 | 49627265 | 49622010 | ID=MS.gene64148.t1;Parent=MS.gene64148 |
| chr5.1 | exon | 49627164 | 49627265 | 49627164 | ID=MS.gene64148.t1.exon1;Parent=MS.gene64148.t1 |
| chr5.1 | CDS | 49627164 | 49627265 | 49627164 | ID=cds.MS.gene64148.t1;Parent=MS.gene64148.t1 |
| chr5.1 | exon | 49626703 | 49626810 | 49626703 | ID=MS.gene64148.t1.exon2;Parent=MS.gene64148.t1 |
| chr5.1 | CDS | 49626703 | 49626810 | 49626703 | ID=cds.MS.gene64148.t1;Parent=MS.gene64148.t1 |
| chr5.1 | exon | 49624817 | 49624901 | 49624817 | ID=MS.gene64148.t1.exon3;Parent=MS.gene64148.t1 |
| chr5.1 | CDS | 49624817 | 49624901 | 49624817 | ID=cds.MS.gene64148.t1;Parent=MS.gene64148.t1 |
| chr5.1 | exon | 49624685 | 49624719 | 49624685 | ID=MS.gene64148.t1.exon4;Parent=MS.gene64148.t1 |
| chr5.1 | CDS | 49624685 | 49624719 | 49624685 | ID=cds.MS.gene64148.t1;Parent=MS.gene64148.t1 |
| chr5.1 | exon | 49624500 | 49624565 | 49624500 | ID=MS.gene64148.t1.exon5;Parent=MS.gene64148.t1 |
| chr5.1 | CDS | 49624500 | 49624565 | 49624500 | ID=cds.MS.gene64148.t1;Parent=MS.gene64148.t1 |
| chr5.1 | exon | 49624371 | 49624411 | 49624371 | ID=MS.gene64148.t1.exon6;Parent=MS.gene64148.t1 |
| chr5.1 | CDS | 49624371 | 49624411 | 49624371 | ID=cds.MS.gene64148.t1;Parent=MS.gene64148.t1 |
| chr5.1 | exon | 49623902 | 49624032 | 49623902 | ID=MS.gene64148.t1.exon7;Parent=MS.gene64148.t1 |
| chr5.1 | CDS | 49623902 | 49624032 | 49623902 | ID=cds.MS.gene64148.t1;Parent=MS.gene64148.t1 |
| chr5.1 | exon | 49623625 | 49623731 | 49623625 | ID=MS.gene64148.t1.exon8;Parent=MS.gene64148.t1 |
| chr5.1 | CDS | 49623625 | 49623731 | 49623625 | ID=cds.MS.gene64148.t1;Parent=MS.gene64148.t1 |
| chr5.1 | exon | 49622959 | 49623096 | 49622959 | ID=MS.gene64148.t1.exon9;Parent=MS.gene64148.t1 |
| chr5.1 | CDS | 49622959 | 49623096 | 49622959 | ID=cds.MS.gene64148.t1;Parent=MS.gene64148.t1 |
| chr5.1 | exon | 49622237 | 49622371 | 49622237 | ID=MS.gene64148.t1.exon10;Parent=MS.gene64148.t1 |
| chr5.1 | CDS | 49622237 | 49622371 | 49622237 | ID=cds.MS.gene64148.t1;Parent=MS.gene64148.t1 |
| chr5.1 | exon | 49622010 | 49622120 | 49622010 | ID=MS.gene64148.t1.exon11;Parent=MS.gene64148.t1 |
| chr5.1 | CDS | 49622010 | 49622120 | 49622010 | ID=cds.MS.gene64148.t1;Parent=MS.gene64148.t1 |
| Gene Sequence |
| Protein sequence |
