AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69001


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69001.t1 MTR_6g088270 88.507 1105 49 5 1 1078 1 1054 0.0 1876
MS.gene69001.t1 MTR_6g087270 67.466 292 35 3 1 292 1 232 1.01e-115 357
MS.gene69001.t1 MTR_6g087300 57.143 364 95 6 694 1051 50 358 3.71e-113 355
MS.gene69001.t1 MTR_6g087300 50.000 160 51 1 649 808 206 336 3.60e-37 144
MS.gene69001.t1 MTR_6g087300 39.674 184 39 4 885 1068 46 157 2.43e-26 112
MS.gene69001.t1 MTR_2g039780 75.000 172 27 3 908 1078 60 216 3.68e-72 239
MS.gene69001.t1 MTR_2g039780 48.485 165 49 4 690 833 63 212 1.54e-35 135
MS.gene69001.t1 MTR_6g088250 50.955 314 82 10 470 733 1050 1341 2.67e-66 245
MS.gene69001.t1 MTR_6g088250 67.273 110 36 0 846 955 1233 1342 7.70e-37 151
MS.gene69001.t1 MTR_6g084360 74.699 166 13 1 905 1070 973 1109 3.59e-65 240
MS.gene69001.t1 MTR_6g084360 46.996 283 61 5 566 827 893 1107 2.76e-52 200
MS.gene69001.t1 MTR_6g027070 75.000 152 19 1 652 803 12 144 4.21e-64 214
MS.gene69001.t1 MTR_6g027070 58.599 157 46 2 867 1023 6 143 3.95e-48 168
MS.gene69001.t1 MTR_0428s0020 57.216 194 28 3 868 1061 38 176 4.47e-52 182
MS.gene69001.t1 MTR_0428s0020 38.636 264 89 6 641 902 30 222 1.05e-35 135
MS.gene69001.t1 MTR_6g088240 55.851 188 66 3 891 1066 1 183 3.27e-51 178
MS.gene69001.t1 MTR_6g088240 42.703 185 75 5 670 825 1 183 1.65e-30 119
MS.gene69001.t1 MTR_2g039790 78.378 111 11 1 868 978 15 112 7.09e-49 170
MS.gene69001.t1 MTR_2g039790 59.649 114 33 1 649 762 17 117 1.08e-36 135
MS.gene69001.t1 MTR_6g488290 55.801 181 25 3 868 1048 38 163 2.69e-46 165
MS.gene69001.t1 MTR_6g488290 56.637 113 33 2 641 751 30 128 9.87e-28 111
MS.gene69001.t1 MTR_6g488300 54.878 164 39 6 564 715 1194 1334 8.79e-33 138
MS.gene69001.t1 MTR_6g066260 75.000 80 20 0 696 775 18 97 2.56e-32 121
MS.gene69001.t1 MTR_6g066260 50.526 95 47 0 902 996 3 97 7.30e-24 97.4
MS.gene69001.t1 MTR_6g087200 76.829 82 9 1 713 794 1033 1104 1.97e-28 124
MS.gene69001.t1 MTR_6g087200 53.659 82 28 1 934 1015 1033 1104 1.93e-18 92.0
MS.gene69001.t1 MTR_0428s0030 46.512 172 59 5 552 715 1242 1388 1.19e-27 122
MS.gene69001.t1 MTR_6g088260 46.377 207 46 11 470 651 1049 1215 1.47e-24 111
MS.gene69001.t1 MTR_6g087320 36.667 300 117 15 369 651 1224 1467 2.38e-20 98.2
MS.gene69001.t1 MTR_0428s0040 47.059 170 27 9 490 651 45 159 2.47e-19 87.4
MS.gene69001.t1 MTR_6g003970 47.312 93 48 1 878 970 31 122 1.48e-15 79.7
MS.gene69001.t1 MTR_6g003970 43.137 102 57 1 648 749 22 122 3.28e-15 79.0
MS.gene69001.t1 MTR_6g088250 43.972 141 39 5 470 587 1050 1173 1.81e-15 82.0
MS.gene69001.t1 MTR_6g087190 79.487 39 8 0 922 960 15 53 1.06e-14 70.1
MS.gene69001.t1 MTR_2g039770 54.167 96 34 4 369 458 1163 1254 4.06e-14 77.8
MS.gene69001.t1 MTR_6g081090 87.179 39 5 0 868 906 5 43 1.02e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69001.t1 AT4G29060 72.581 496 108 3 593 1068 464 951 0.0 666
MS.gene69001.t1 AT4G29060 49.600 375 165 10 1 367 1 359 1.54e-96 328
MS.gene69001.t1 AT4G29060 67.635 241 70 2 839 1074 482 719 3.29e-96 328
MS.gene69001.t1 AT4G29060 49.600 375 165 10 1 367 1 359 9.81e-99 328
MS.gene69001.t1 AT4G29060 70.638 235 55 3 839 1068 482 707 4.62e-98 327
MS.gene69001.t1 AT4G29060 61.176 255 68 4 593 827 464 707 8.38e-83 285
MS.gene69001.t1 AT4G11120 49.462 93 44 2 877 969 76 165 1.11e-15 80.9
MS.gene69001.t1 AT4G11120 43.478 92 51 1 656 747 76 166 1.76e-14 77.4

Find 235 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCAGTGGCAGGACTTTC+AGG 0.148977 6.2:-86972733 None:intergenic
TCCGACAGAGCATGATATTA+TGG 0.209544 6.2:-86970642 None:intergenic
CATTTATAATACTACCTTCT+TGG 0.212564 6.2:-86971828 None:intergenic
TTCCGTTTCTGTGGCTGATA+TGG 0.247171 6.2:-86970855 None:intergenic
TTCCTTCGTCACAATAGTTT+CGG 0.269335 6.2:-86975158 None:intergenic
ACACTGTCATCCTTAATAAA+AGG 0.285274 6.2:-86975295 None:intergenic
GATAATGGGAAAATCTTCTT+TGG 0.285488 6.2:+86971519 MS.gene69001:CDS
GAGGAAGATGACGATGGATT+TGG 0.287722 6.2:+86971493 MS.gene69001:CDS
GCAAGCATACCTCAGGAAAA+AGG 0.290284 6.2:+86974922 MS.gene69001:CDS
TCCTTCAGCTGTTAGTCTTC+CGG 0.296190 6.2:-86974969 None:intergenic
CGATGGATTTGGGAAGATAA+TGG 0.301730 6.2:+86971504 MS.gene69001:CDS
ACCAAATCCTCATTCTTTAT+AGG 0.303944 6.2:-86971040 None:intergenic
CCGACAGAGCATGATATTAT+GGG 0.306224 6.2:-86970641 None:intergenic
TTTCCTTCATTTGTCGTCAA+TGG 0.307996 6.2:+86970779 MS.gene69001:CDS
AACAGCTCCTTCCTTCTTCA+TGG 0.308813 6.2:-86971602 None:intergenic
TTTGGTGCGTTTGTTGATTT+CGG 0.315228 6.2:+86971106 MS.gene69001:CDS
TCCTATAAAGAATGAGGATT+TGG 0.315659 6.2:+86971039 MS.gene69001:CDS
CAAGAAGGTAGTATTATAAA+TGG 0.318909 6.2:+86971829 MS.gene69001:CDS
CCGGATTTCTCTGCATTGTT+TGG 0.319815 6.2:-86971310 None:intergenic
TCTTTCCTTGGACCCGATTT+CGG 0.321232 6.2:-86971352 None:intergenic
AAGAATGAGGATTTGGTTCC+TGG 0.324412 6.2:+86971046 MS.gene69001:CDS
GTTGTTCTTTCTTGTCAAAT+AGG 0.336172 6.2:-86970690 None:intergenic
CAGTAACAACATACTCTACT+TGG 0.337840 6.2:-86973470 None:intergenic
TGACAGCAGGATCGGTGTTT+TGG 0.339026 6.2:+86973356 MS.gene69001:CDS
GGAAGGAGCTGTTGCAGAAT+TGG 0.340077 6.2:+86971612 MS.gene69001:CDS
GTTCAACCTCGGAGAGGGTT+TGG 0.342209 6.2:+86973734 MS.gene69001:CDS
TCTTGCAGGTCTTGAACGTT+TGG 0.345150 6.2:-86971002 None:intergenic
GGAAAATCTTCTTTGGAGAT+TGG 0.353117 6.2:+86971526 MS.gene69001:CDS
GGAAATTCTTCGGTTATTCC+TGG 0.356752 6.2:+86970662 MS.gene69001:CDS
TAGCAGACAATTGCAACTAT+TGG 0.357165 6.2:+86973681 MS.gene69001:intron
TCCTTCGTCACAATAGTTTC+GGG 0.358591 6.2:-86975157 None:intergenic
CTTGTTCCAACTTCATTTGA+AGG 0.363120 6.2:-86970932 None:intergenic
TCTTTCACTGGAGTAGTTAC+CGG 0.365022 6.2:-86973810 None:intergenic
ATTTCTGATTCTGTAACAAC+AGG 0.368138 6.2:-86972264 None:intergenic
AGAGGCGGTTGCTGAAAGTT+TGG 0.370006 6.2:+86971870 MS.gene69001:CDS
TCTAAGGAGCTCTTGTGCTT+TGG 0.371836 6.2:-86973259 None:intergenic
AGGAAGATGACGATGGATTT+GGG 0.384366 6.2:+86971494 MS.gene69001:CDS
CCTTCCTTCGGCAGTTGCTC+TGG 0.387278 6.2:-86973316 None:intergenic
AGCAACTTATCTAACTCTAA+TGG 0.392584 6.2:+86972826 MS.gene69001:CDS
TCTTCAACTTGTGCTGATAC+AGG 0.393393 6.2:-86972772 None:intergenic
CACGAAATTTGTTGTAGGTC+AGG 0.395926 6.2:+86971384 MS.gene69001:CDS
GTCTCAAGTGTTGTATCTCT+TGG 0.397746 6.2:+86971187 MS.gene69001:CDS
TTACTTTGGTTCAGTCTCCT+TGG 0.398409 6.2:-86973853 None:intergenic
GAGGTGGGATTCTCCGAAAT+CGG 0.402919 6.2:+86971339 MS.gene69001:CDS
CCTTTATTCAAGCTTTCCTC+AGG 0.405283 6.2:-86972560 None:intergenic
TTCAGGAGAGGGAACTTGAT+TGG 0.407047 6.2:-86972716 None:intergenic
CTATGAAAAGCCAATACAAA+AGG 0.410747 6.2:-86971676 None:intergenic
AGAAATCCTTCCTCTCCTTC+AGG 0.415362 6.2:-86971460 None:intergenic
AAGCAACTTCGGGACGAAAC+AGG 0.415386 6.2:+86973183 MS.gene69001:CDS
TGTTGTAGGTCAGGAGTTGC+AGG 0.415982 6.2:+86971393 MS.gene69001:CDS
CTTTCATCAGCCACTTCAAC+CGG 0.420120 6.2:-86971982 None:intergenic
GATGGATTTGGGAAGATAAT+GGG 0.421467 6.2:+86971505 MS.gene69001:CDS
ATGCGTGAAAACACTGATAC+TGG 0.427142 6.2:+86971271 MS.gene69001:CDS
AATGCAGAGAAATCCGGCTC+TGG 0.428192 6.2:+86971316 MS.gene69001:CDS
TCTTGCACCTCTTCAGTGGC+AGG 0.429761 6.2:-86972742 None:intergenic
GTAAAATCTATCCAACCATT+TGG 0.434906 6.2:+86971088 MS.gene69001:CDS
AGAAATCCGGCTCTGGGAGG+TGG 0.435137 6.2:+86971323 MS.gene69001:CDS
TGCACAAACTACAGCAAAAC+CGG 0.435471 6.2:+86973791 MS.gene69001:CDS
CCTGGTGTTTCTTGAGGAGC+TGG 0.437084 6.2:-86972300 None:intergenic
GAAAACCTTGTAGGCTATGC+TGG 0.437383 6.2:-86975430 None:intergenic
AGGCAAAGTATAGCTACTAT+TGG 0.441103 6.2:+86975337 MS.gene69001:CDS
TCTAACTCTAATGGACAAAC+TGG 0.444131 6.2:+86972835 MS.gene69001:CDS
TCTTTCTTCACGAATTCCTC+AGG 0.445506 6.2:-86973501 None:intergenic
TCGTCATCTTCCTCAGCTAA+TGG 0.453821 6.2:-86971484 None:intergenic
TTCAGTCTCCTTGGCTTCTA+CGG 0.455161 6.2:-86973844 None:intergenic
ATGCTCTGTCGGAAATTCTT+CGG 0.455804 6.2:+86970652 MS.gene69001:CDS
GGAAGAATCTCAAAGAGGTT+AGG 0.459157 6.2:+86975250 MS.gene69001:CDS
CTAGAAACTTCATCGGCAAC+AGG 0.460398 6.2:-86970902 None:intergenic
AGAAGATCTTGCGTCAAAAC+CGG 0.460563 6.2:+86973545 MS.gene69001:CDS
AGGTGGGATTCTCCGAAATC+GGG 0.464270 6.2:+86971340 MS.gene69001:CDS
CCTGAGGAAAGCTTGAATAA+AGG 0.465580 6.2:+86972560 MS.gene69001:CDS
CGAAGTTGCTTCACAAGTGC+TGG 0.465644 6.2:-86973171 None:intergenic
TGAAAGTTACAAGGTTTGTT+CGG 0.466730 6.2:+86973712 MS.gene69001:CDS
AGTAGTGGTCTCAGCCGCTT+TGG 0.466995 6.2:+86974814 MS.gene69001:CDS
AGAAACCGGTGCAGGGATGA+TGG 0.468491 6.2:+86974853 MS.gene69001:CDS
GGCATTACTGCTTCAGATGA+AGG 0.469960 6.2:+86972856 MS.gene69001:CDS
CCAAACAATGCAGAGAAATC+CGG 0.471870 6.2:+86971310 MS.gene69001:CDS
CAGCACTTGTGAAGCAACTT+CGG 0.472018 6.2:+86973172 MS.gene69001:CDS
TCCTTGGCTTCTACGGCAGC+AGG 0.472687 6.2:-86973837 None:intergenic
ATCCTTGATCTAATTTGCTC+CGG 0.478542 6.2:-86973564 None:intergenic
CGAAACAGGAGCTGGAATGA+TGG 0.479672 6.2:+86973197 MS.gene69001:CDS
GCCTGCTGCCGTAGAAGCCA+AGG 0.479837 6.2:+86973836 MS.gene69001:CDS
ACAAGCGAATATGCTCTTAC+CGG 0.485263 6.2:+86970816 MS.gene69001:CDS
TGTTGATTTCGGAGCTTTCA+CGG 0.487404 6.2:+86971117 MS.gene69001:CDS
GAATCTCCTTCAAATGAAGT+TGG 0.490154 6.2:+86970926 MS.gene69001:CDS
GATAGTGATGCAGTTGAGCC+TGG 0.490200 6.2:+86972240 MS.gene69001:CDS
CCAGTGTTGGCATCGGACTT+AGG 0.492624 6.2:-86970968 None:intergenic
GTAAGAACCTATCCTTCCTT+CGG 0.495021 6.2:-86973328 None:intergenic
AACTGAAGGTGATCTTGAAA+AGG 0.495747 6.2:+86974898 MS.gene69001:CDS
ATTAGATCAAGGATTGTTGA+AGG 0.498357 6.2:+86973573 MS.gene69001:CDS
GCAAGTTGCTGCTTGTCCAC+AGG 0.499547 6.2:+86975108 MS.gene69001:CDS
TTTAATAGAAACTGACTCAC+TGG 0.499823 6.2:+86972005 MS.gene69001:CDS
TTTAATAGAAACTGACTCAC+TGG 0.499823 6.2:+86972128 MS.gene69001:CDS
AGAAACTGTGGAAGATTCAC+TGG 0.500295 6.2:+86971768 MS.gene69001:CDS
AAACACCGATCCTGCTGTCA+TGG 0.503436 6.2:-86973353 None:intergenic
TTCCATATCAGCCACAGAAA+CGG 0.506507 6.2:+86970853 MS.gene69001:CDS
CTCACTTCTGCCAACAAAGT+CGG 0.506846 6.2:-86975053 None:intergenic
CTTGTCAAATAGGCAACTCC+AGG 0.508349 6.2:-86970680 None:intergenic
ACTCCATTGACGACAAATGA+AGG 0.509746 6.2:-86970782 None:intergenic
TATGAAAAGCCAATACAAAA+GGG 0.511672 6.2:-86971675 None:intergenic
AACTGACTCACCGGTTGAAG+TGG 0.514660 6.2:+86971972 MS.gene69001:CDS
TCAGATGAAGGCTCGAGTAA+AGG 0.519026 6.2:+86972868 MS.gene69001:CDS
GCAGCAGGCTCCTCTTTCAC+TGG 0.519070 6.2:-86973822 None:intergenic
AAATCAACAAACGCACCAAA+TGG 0.523061 6.2:-86971103 None:intergenic
CCCATAATATCATGCTCTGT+CGG 0.523123 6.2:+86970641 MS.gene69001:CDS
GGCTTTCGTAGAACCAGTGT+TGG 0.523954 6.2:-86970981 None:intergenic
CGATTCCTCGACAACTATTG+TGG 0.524779 6.2:+86971792 MS.gene69001:CDS
GATTCTGTAACAACAGGGCC+AGG 0.526402 6.2:-86972258 None:intergenic
AGTAACAACATACTCTACTT+GGG 0.527067 6.2:-86973469 None:intergenic
TGGCAGAAGTGAGAAATTCA+AGG 0.527151 6.2:+86975063 MS.gene69001:CDS
AACCGGAGCAAATTAGATCA+AGG 0.527437 6.2:+86973562 MS.gene69001:CDS
ATCTCTTGGACAAGAAGTTA+CGG 0.527459 6.2:+86971201 MS.gene69001:CDS
AAGTGAGAAATTCAAGGAGT+TGG 0.528224 6.2:+86975069 MS.gene69001:CDS
TCATCCGCTGATAAGAAATC+CGG 0.529747 6.2:+86974950 MS.gene69001:CDS
AGCACTTGTGAAGCAACTTC+GGG 0.530877 6.2:+86973173 MS.gene69001:CDS
CTAACAGCTGAAGGAAGAAT+CGG 0.531197 6.2:+86974977 MS.gene69001:CDS
AGAATCCCACCTCCCAGAGC+CGG 0.531201 6.2:-86971329 None:intergenic
AACTGCATCACTATCTGCCT+CGG 0.535230 6.2:-86972232 None:intergenic
CTTTATTCAAGCTTTCCTCA+GGG 0.535989 6.2:-86972559 None:intergenic
TATAAATGGTGCCGCTGTGA+AGG 0.536066 6.2:+86971843 MS.gene69001:CDS
TGTTCTCGGGTTTCGAAGCA+AGG 0.537039 6.2:-86975207 None:intergenic
CTACGAGAAGAAACCGGTGC+AGG 0.539828 6.2:+86974845 MS.gene69001:CDS
CAACAAACGCACCAAATGGT+TGG 0.540062 6.2:-86971099 None:intergenic
TACATTCACGATGCACGCAT+TGG 0.540085 6.2:+86975004 MS.gene69001:CDS
CAAGAACCTGGTGTTTCTTG+AGG 0.540517 6.2:-86972306 None:intergenic
GGGGCACGCAGCCACTTGCA+TGG 0.540689 6.2:-86973448 None:intergenic
AACTGTGAAACCGACTTTGT+TGG 0.542867 6.2:+86975043 MS.gene69001:CDS
GAGAAAATATGAAAGTTACA+AGG 0.544236 6.2:+86973703 MS.gene69001:CDS
AAGCAACTACGAGAAGAAAC+CGG 0.544505 6.2:+86974839 MS.gene69001:CDS
CGTAGAACCAGTGTTGGCAT+CGG 0.545019 6.2:-86970975 None:intergenic
CTTCGGGACGAAACAGGAGC+TGG 0.545385 6.2:+86973189 MS.gene69001:CDS
AAATCCTCATTCTTTATAGG+AGG 0.545789 6.2:-86971037 None:intergenic
AAAAGGCGCAAGCATACCTC+AGG 0.548541 6.2:+86974915 MS.gene69001:CDS
CACGGATACTTCCGTTTCTG+TGG 0.549084 6.2:-86970864 None:intergenic
ATTTCTTATCAGCGGATGAG+AGG 0.549418 6.2:-86974946 None:intergenic
ATGCAGAGAAATCCGGCTCT+GGG 0.550324 6.2:+86971317 MS.gene69001:CDS
GTTCGGTTCAACCTCGGAGA+GGG 0.551728 6.2:+86973729 MS.gene69001:CDS
CCTAAGTCCGATGCCAACAC+TGG 0.552498 6.2:+86970968 MS.gene69001:CDS
AGCGACATTGACCATGAAGA+AGG 0.553562 6.2:+86971591 MS.gene69001:CDS
GGTAACTACTCCAGTGAAAG+AGG 0.553754 6.2:+86973812 MS.gene69001:CDS
ATCACCTTCAGTTTCAGCAA+GGG 0.556148 6.2:-86974888 None:intergenic
GGACAAGGCACTTGCACAAG+TGG 0.557097 6.2:+86971633 MS.gene69001:CDS
TACATCCATGACAGCAGGAT+CGG 0.561063 6.2:+86973348 MS.gene69001:CDS
ATTCTCCGAAATCGGGTCCA+AGG 0.561858 6.2:+86971347 MS.gene69001:CDS
GTTCTTACATCCATGACAGC+AGG 0.562189 6.2:+86973343 MS.gene69001:CDS
GCAACCAGAGCAACTGCCGA+AGG 0.564971 6.2:+86973312 MS.gene69001:CDS
TGAAAGTCCTGCCACTGAAG+AGG 0.565352 6.2:+86972735 MS.gene69001:CDS
AGAATGAGGATTTGGTTCCT+GGG 0.566483 6.2:+86971047 MS.gene69001:CDS
CAAGGAGTTCTTCAAGACAC+GGG 0.568778 6.2:+86970735 MS.gene69001:CDS
GAAATCCGGCTCTGGGAGGT+GGG 0.570627 6.2:+86971324 MS.gene69001:CDS
TTGTTCTTGCACCTCTTCAG+TGG 0.570826 6.2:-86972746 None:intergenic
AGGTCAGGAGTTGCAGGGTA+CGG 0.571288 6.2:+86971399 MS.gene69001:CDS
GGAATTCGTGAAGAAAGAAA+CGG 0.571607 6.2:+86973506 MS.gene69001:CDS
CCAGAGCAACTGCCGAAGGA+AGG 0.571991 6.2:+86973316 MS.gene69001:CDS
GGATTGTTGAAGGACGGATA+AGG 0.572423 6.2:+86973583 MS.gene69001:CDS
GATCAAGGATTGTTGAAGGA+CGG 0.572700 6.2:+86973577 MS.gene69001:CDS
ACAGTCCATCATCCCTGCAC+CGG 0.573161 6.2:-86974858 None:intergenic
GTTGAGTGATAGCTTTGTAA+AGG 0.577562 6.2:+86971162 MS.gene69001:CDS
AACTGACTCACTGGTTGAAG+TGG 0.577686 6.2:+86972014 MS.gene69001:CDS
AACTGACTCACTGGTTGAAG+TGG 0.577686 6.2:+86972137 MS.gene69001:CDS
TCCGGAAGACTAACAGCTGA+AGG 0.578192 6.2:+86974968 MS.gene69001:CDS
GTGGCAGGACTTTCAGGAGA+GGG 0.578693 6.2:-86972727 None:intergenic
GCAACTGCCGAAGGAAGGAT+AGG 0.582552 6.2:+86973321 MS.gene69001:CDS
TCACTTCCTGAAGGAGAGGA+AGG 0.585701 6.2:+86971454 MS.gene69001:CDS
AGCATCCACAATAGTTGTCG+AGG 0.586922 6.2:-86971797 None:intergenic
GTAACAACATACTCTACTTG+GGG 0.587126 6.2:-86973468 None:intergenic
CAAGACACGGGTCATCAACT+CGG 0.587499 6.2:+86970747 MS.gene69001:CDS
GAATGAGGATTTGGTTCCTG+GGG 0.589688 6.2:+86971048 MS.gene69001:CDS
GAGCATATTCGCTTGTTCTG+AGG 0.590286 6.2:-86970809 None:intergenic
TATGTCACTTCCTGAAGGAG+AGG 0.591935 6.2:+86971450 MS.gene69001:CDS
GTGCAGGAAATCAGCAGTAG+TGG 0.596207 6.2:+86974799 MS.gene69001:intron
CAATGTCGAAACTGACTCAC+CGG 0.597997 6.2:+86971963 MS.gene69001:CDS
TAAACTTTCATCAGCCACCT+CGG 0.598260 6.2:-86972109 None:intergenic
GGGTTTGGAAAAGAAAAGCG+AGG 0.599000 6.2:+86973749 MS.gene69001:CDS
AATGCTCTTTCTGAAAGTGA+AGG 0.599535 6.2:+86973228 MS.gene69001:CDS
GATGCCTCCTATAAAGAATG+AGG 0.599796 6.2:+86971033 MS.gene69001:CDS
TGCTGTAAATTCAATTATCG+AGG 0.603012 6.2:+86971912 MS.gene69001:CDS
TGAAGCAGTTGCAATTGCAT+CGG 0.603597 6.2:+86972795 MS.gene69001:CDS
TCCCGAAACTATTGTGACGA+AGG 0.603689 6.2:+86975156 MS.gene69001:CDS
AGGTTTGTTCGGTTCAACCT+CGG 0.604002 6.2:+86973723 MS.gene69001:CDS
AGAATCAGAAATTACGTCAA+GGG 0.606809 6.2:+86972275 MS.gene69001:CDS
TCAAGGAGTTCTTCAAGACA+CGG 0.608349 6.2:+86970734 MS.gene69001:CDS
GTTGTAGGTCAGGAGTTGCA+GGG 0.609211 6.2:+86971394 MS.gene69001:CDS
ATCAGAAACTGACAATGGAA+AGG 0.610096 6.2:+86972068 MS.gene69001:CDS
ACATTGACCATGAAGAAGGA+AGG 0.610935 6.2:+86971595 MS.gene69001:CDS
ATCAGAAACTGACAATGGAA+AGG 0.612351 6.2:+86972191 MS.gene69001:CDS
AAAGCCCTTGCTGAAACTGA+AGG 0.615327 6.2:+86974884 MS.gene69001:CDS
CAGAATCAGAAATTACGTCA+AGG 0.617197 6.2:+86972274 MS.gene69001:CDS
TCTTCCGGATTTCTTATCAG+CGG 0.617295 6.2:-86974954 None:intergenic
ATAGATACAAACTGAACCTG+TGG 0.617602 6.2:-86975124 None:intergenic
AGGATTTCTACCATTAGCTG+AGG 0.618726 6.2:+86971474 MS.gene69001:CDS
TTCCCCGTAAAAGCTGCCCC+AGG 0.620108 6.2:-86971064 None:intergenic
ATCATCAACTACAGAAACTG+TGG 0.620439 6.2:+86971756 MS.gene69001:CDS
TACGAGAAGAAACCGGTGCA+GGG 0.620957 6.2:+86974846 MS.gene69001:CDS
GATCACCTTCAGTTTCAGCA+AGG 0.621026 6.2:-86974889 None:intergenic
AGAATTTGTAGCTGCAACCG+AGG 0.621955 6.2:+86972092 MS.gene69001:CDS
CATTAGAGAGAAAATTGTCG+AGG 0.623126 6.2:+86975228 MS.gene69001:CDS
GATTTCGGAGCTTTCACGGA+CGG 0.623504 6.2:+86971121 MS.gene69001:CDS
CGCTGTGAAGGAAACAGAGG+CGG 0.624068 6.2:+86971855 MS.gene69001:CDS
AGAACTTGTAGCTGCAACCG+AGG 0.625070 6.2:+86972215 MS.gene69001:CDS
AAACAATCAGAAACTGACAA+TGG 0.627847 6.2:+86972063 MS.gene69001:CDS
ACGGATAAGGAAAAGACTTG+AGG 0.629079 6.2:+86973596 MS.gene69001:CDS
GATGCTGAAAGCAACCAAGA+AGG 0.630011 6.2:+86971814 MS.gene69001:CDS
AAACTATCAGAAACTGACAA+TGG 0.630102 6.2:+86972186 MS.gene69001:CDS
ATTAGAGAGAAAATTGTCGA+GGG 0.630225 6.2:+86975229 MS.gene69001:CDS
AGATTCACTAGAAACTTCAT+CGG 0.630685 6.2:-86970909 None:intergenic
CCAGCTCCTCAAGAAACACC+AGG 0.634532 6.2:+86972300 MS.gene69001:CDS
CAGTGTTGTTGTGAAAGACT+TGG 0.638715 6.2:+86975312 MS.gene69001:CDS
AGGTGAATCTTGTACCTCCA+CGG 0.639783 6.2:-86970882 None:intergenic
CACAGAAACGGAAGTATCCG+TGG 0.640815 6.2:+86970865 MS.gene69001:CDS
TGTTCGGTTCAACCTCGGAG+AGG 0.640909 6.2:+86973728 MS.gene69001:CDS
TGGACAAGAAGTTACGGTGA+AGG 0.643574 6.2:+86971207 MS.gene69001:CDS
TTTATTCAAGCTTTCCTCAG+GGG 0.650245 6.2:-86972558 None:intergenic
TGATGCTAGTTTGTCCCCTG+AGG 0.651987 6.2:+86972544 MS.gene69001:CDS
AGCTGTTGCAGAATTGGACA+AGG 0.653686 6.2:+86971618 MS.gene69001:CDS
TCGTAGTTGCTTAACCAAAG+CGG 0.653913 6.2:-86974828 None:intergenic
GACAAGGCACTTGCACAAGT+GGG 0.662224 6.2:+86971634 MS.gene69001:CDS
TTTCTGATTCTGTAACAACA+GGG 0.669103 6.2:-86972263 None:intergenic
TTGTTGTGAAAGACTTGGTG+AGG 0.670747 6.2:+86975317 MS.gene69001:CDS
GTGAAGAATATGACGAGGAG+TGG 0.674205 6.2:+86971421 MS.gene69001:CDS
AGTGGCAGGACTTTCAGGAG+AGG 0.675717 6.2:-86972728 None:intergenic
TGTTACTGAAGACGTTCCTG+AGG 0.678093 6.2:+86973485 MS.gene69001:CDS
CGATGATATAGCCATGCAAG+TGG 0.678787 6.2:+86973437 MS.gene69001:CDS
ATTTGTAGCTGCAACCGAGG+TGG 0.680188 6.2:+86972095 MS.gene69001:CDS
CAGAGAAATCCGGCTCTGGG+AGG 0.680505 6.2:+86971320 MS.gene69001:CDS
AGTGGCTGATCAAATTGTTG+CGG 0.682112 6.2:+86972032 MS.gene69001:CDS
AGTGGCTGATCAAATTGTTG+CGG 0.682112 6.2:+86972155 MS.gene69001:CDS
TGCCGCTGTGAAGGAAACAG+AGG 0.683333 6.2:+86971852 MS.gene69001:CDS
TCGAGGGAAGAATCTCAAAG+AGG 0.687349 6.2:+86975245 MS.gene69001:CDS
TTGGAGAGAATATTAAAGTG+CGG 0.692697 6.2:+86975356 MS.gene69001:CDS
TTAGCTGAGGAAGATGACGA+TGG 0.704035 6.2:+86971487 MS.gene69001:CDS
CGCCTCTGTTTCCTTCACAG+CGG 0.724904 6.2:-86971854 None:intergenic
TAACAACATACTCTACTTGG+GGG 0.727944 6.2:-86973467 None:intergenic
GTACGGTGAAGAATATGACG+AGG 0.743517 6.2:+86971416 MS.gene69001:CDS
AGAAACGGAAGTATCCGTGG+AGG 0.788331 6.2:+86970868 MS.gene69001:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTATTTAATTATGAAATTT+TGG + chr6.2:86973908-86973927 MS.gene69001:intron 10.0%
!! AATTATGGAAATTTCATAAT+GGG - chr6.2:86974330-86974349 None:intergenic 15.0%
!! ATTACATATTCAATTAATCA+AGG + chr6.2:86974079-86974098 MS.gene69001:intron 15.0%
!! TAAAAACAAAAATGAAGTTT+GGG - chr6.2:86974051-86974070 None:intergenic 15.0%
!! TAATTATGGAAATTTCATAA+TGG - chr6.2:86974331-86974350 None:intergenic 15.0%
!! TTAAAAACAAAAATGAAGTT+TGG - chr6.2:86974052-86974071 None:intergenic 15.0%
!!! ACTTCATTTTTGTTTTTAAA+AGG + chr6.2:86974053-86974072 MS.gene69001:intron 15.0%
!!! ATATATCATGTCAATTTTAA+TGG - chr6.2:86974147-86974166 None:intergenic 15.0%
!!! TTATCTTATAAGCTTTAATT+AGG + chr6.2:86973028-86973047 MS.gene69001:intron 15.0%
!! CATTAACTTTATGTACTAAT+TGG + chr6.2:86974379-86974398 MS.gene69001:intron 20.0%
!! GTATTTACATATGGAAATAT+TGG + chr6.2:86972368-86972387 MS.gene69001:intron 20.0%
!! TATTAAATTGTTCAATGTTG+TGG + chr6.2:86974777-86974796 MS.gene69001:intron 20.0%
!! TTATCTAAGAATTCAAAGAT+AGG - chr6.2:86973094-86973113 None:intergenic 20.0%
!! TTTAAAAACATCAACAATGT+AGG + chr6.2:86974025-86974044 MS.gene69001:intron 20.0%
!!! TAAGGATATTGCTAAATTTT+TGG + chr6.2:86971702-86971721 MS.gene69001:CDS 20.0%
!!! TGGCTTTTAAATTAAGTTAA+AGG + chr6.2:86974286-86974305 MS.gene69001:intron 20.0%
!!! TTTGATTTTAGCTGTAATTT+CGG - chr6.2:86972408-86972427 None:intergenic 20.0%
! ACATCATTTGTAAAAAGAGT+GGG - chr6.2:86974454-86974473 None:intergenic 25.0%
! ACTTTATCATTCTTGATGTA+GGG - chr6.2:86973642-86973661 None:intergenic 25.0%
! ATAGAGGATTCAAAGTTAAT+AGG - chr6.2:86972675-86972694 None:intergenic 25.0%
! ATCTCATTCGTATTTACATA+TGG + chr6.2:86972359-86972378 MS.gene69001:intron 25.0%
! CAAAGTTAATAGGATACTAT+AGG - chr6.2:86972665-86972684 None:intergenic 25.0%
! CAAGAAGGTAGTATTATAAA+TGG + chr6.2:86971829-86971848 MS.gene69001:CDS 25.0%
! CATTTATAATACTACCTTCT+TGG - chr6.2:86971831-86971850 None:intergenic 25.0%
! GAATGATAAAGTAACAGTAA+AGG + chr6.2:86973650-86973669 MS.gene69001:intron 25.0%
! GACTAATTTGACACAAAAAA+AGG + chr6.2:86974255-86974274 MS.gene69001:intron 25.0%
! GAGAAAATATGAAAGTTACA+AGG + chr6.2:86973703-86973722 MS.gene69001:CDS 25.0%
! TAAAGTAACAGTAAAGGATA+TGG + chr6.2:86973656-86973675 MS.gene69001:intron 25.0%
! TAAATACGAATGAGATAGAA+GGG - chr6.2:86972355-86972374 None:intergenic 25.0%
! TACTTTATCATTCTTGATGT+AGG - chr6.2:86973643-86973662 None:intergenic 25.0%
! TATGAAAAGCCAATACAAAA+GGG - chr6.2:86971678-86971697 None:intergenic 25.0%
! TCATTGAACTATACTTACTT+TGG - chr6.2:86973870-86973889 None:intergenic 25.0%
! TTGACACAAAAAAAGGATAA+AGG + chr6.2:86974262-86974281 MS.gene69001:intron 25.0%
! TTGACATGGAAAAAAAATCA+AGG - chr6.2:86973962-86973981 None:intergenic 25.0%
!! AAGAAATAACTAGTTTGACA+TGG - chr6.2:86973976-86973995 None:intergenic 25.0%
!! AATTTTCTCTCTAATGTTCT+CGG - chr6.2:86975224-86975243 None:intergenic 25.0%
!!! AAAAACACGAAATTTGTTGT+AGG + chr6.2:86971379-86971398 MS.gene69001:CDS 25.0%
!!! AAATTTTGGTAAATAGTACC+TGG + chr6.2:86973922-86973941 MS.gene69001:intron 25.0%
!!! ATTGGCTTTTCATAGAAATA+AGG + chr6.2:86971684-86971703 MS.gene69001:CDS 25.0%
!!! GTTGATGTTTTTAAACAAAG+AGG - chr6.2:86974020-86974039 None:intergenic 25.0%
AAACAATCAGAAACTGACAA+TGG + chr6.2:86972063-86972082 MS.gene69001:CDS 30.0%
AAACTATCAGAAACTGACAA+TGG + chr6.2:86972186-86972205 MS.gene69001:CDS 30.0%
AAATCCTCATTCTTTATAGG+AGG - chr6.2:86971040-86971059 None:intergenic 30.0%
AAATTAAGTTAAAGGAACCC+TGG + chr6.2:86974294-86974313 MS.gene69001:intron 30.0%
ACACTGTCATCCTTAATAAA+AGG - chr6.2:86975298-86975317 None:intergenic 30.0%
ACCAAATCCTCATTCTTTAT+AGG - chr6.2:86971043-86971062 None:intergenic 30.0%
AGAATCAGAAATTACGTCAA+GGG + chr6.2:86972275-86972294 MS.gene69001:CDS 30.0%
AGATTCACTAGAAACTTCAT+CGG - chr6.2:86970912-86970931 None:intergenic 30.0%
AGCAACTTATCTAACTCTAA+TGG + chr6.2:86972826-86972845 MS.gene69001:CDS 30.0%
AGGATACTATAGGAAAAGAA+AGG - chr6.2:86972655-86972674 None:intergenic 30.0%
AGGTTAGGGTTAAAATATTC+AGG - chr6.2:86974530-86974549 None:intergenic 30.0%
AGTAACAACATACTCTACTT+GGG - chr6.2:86973472-86973491 None:intergenic 30.0%
ATTAGAGAGAAAATTGTCGA+GGG + chr6.2:86975229-86975248 MS.gene69001:CDS 30.0%
ATTAGATCAAGGATTGTTGA+AGG + chr6.2:86973573-86973592 MS.gene69001:CDS 30.0%
ATTTCTGATTCTGTAACAAC+AGG - chr6.2:86972267-86972286 None:intergenic 30.0%
CACAAAAAAAGGATAAAGGA+TGG + chr6.2:86974266-86974285 MS.gene69001:intron 30.0%
CACATCATTTGTAAAAAGAG+TGG - chr6.2:86974455-86974474 None:intergenic 30.0%
CTATGAAAAGCCAATACAAA+AGG - chr6.2:86971679-86971698 None:intergenic 30.0%
GAAATCTACAAACTGTACAA+GGG + chr6.2:86974493-86974512 MS.gene69001:intron 30.0%
GATACTATAGGAAAAGAAAG+GGG - chr6.2:86972653-86972672 None:intergenic 30.0%
GGATACTATAGGAAAAGAAA+GGG - chr6.2:86972654-86972673 None:intergenic 30.0%
GTAAAATCTATCCAACCATT+TGG + chr6.2:86971088-86971107 MS.gene69001:CDS 30.0%
GTAAATACGAATGAGATAGA+AGG - chr6.2:86972356-86972375 None:intergenic 30.0%
GTTGTTCTTTCTTGTCAAAT+AGG - chr6.2:86970693-86970712 None:intergenic 30.0%
TCCTATAAAGAATGAGGATT+TGG + chr6.2:86971039-86971058 MS.gene69001:CDS 30.0%
TGAAATCTACAAACTGTACA+AGG + chr6.2:86974492-86974511 MS.gene69001:intron 30.0%
TGCTAAAATATTCCAGCAAT+GGG + chr6.2:86974412-86974431 MS.gene69001:intron 30.0%
TGCTGTAAATTCAATTATCG+AGG + chr6.2:86971912-86971931 MS.gene69001:CDS 30.0%
TGTCTACTTTGGCATAATTA+TGG - chr6.2:86974345-86974364 None:intergenic 30.0%
TTGGAGAGAATATTAAAGTG+CGG + chr6.2:86975356-86975375 MS.gene69001:CDS 30.0%
TTTACGTCTGTTTGATGAAA+TGG - chr6.2:86972897-86972916 None:intergenic 30.0%
TTTCTGATTCTGTAACAACA+GGG - chr6.2:86972266-86972285 None:intergenic 30.0%
! ATTTTCTCTCTAATGTTCTC+GGG - chr6.2:86975223-86975242 None:intergenic 30.0%
! CACAAACTTTGAGGAAAAAA+TGG + chr6.2:86974738-86974757 MS.gene69001:intron 30.0%
! GCATTTTGTAAACTTACTAC+TGG - chr6.2:86974682-86974701 None:intergenic 30.0%
! GTGTTTTTCTTATCTTTCCT+TGG - chr6.2:86971367-86971386 None:intergenic 30.0%
! TAACTAGACTCAACTTTTCA+AGG + chr6.2:86970717-86970736 MS.gene69001:CDS 30.0%
! TGAAAGTTACAAGGTTTGTT+CGG + chr6.2:86973712-86973731 MS.gene69001:CDS 30.0%
! TTAGGTTGTTTATCGAAACA+AGG + chr6.2:86973046-86973065 MS.gene69001:intron 30.0%
! TTTAATAGAAACTGACTCAC+TGG + chr6.2:86972005-86972024 MS.gene69001:CDS 30.0%
!! GATAATGGGAAAATCTTCTT+TGG + chr6.2:86971519-86971538 MS.gene69001:CDS 30.0%
!! TGCTAAATTTTTGGATCAGA+GGG + chr6.2:86971711-86971730 MS.gene69001:CDS 30.0%
!! TTGCTAAATTTTTGGATCAG+AGG + chr6.2:86971710-86971729 MS.gene69001:CDS 30.0%
AAATCAACAAACGCACCAAA+TGG - chr6.2:86971106-86971125 None:intergenic 35.0%
AAATCATACAGTCACAGCTT+AGG - chr6.2:86974586-86974605 None:intergenic 35.0%
AACTGAAGGTGATCTTGAAA+AGG + chr6.2:86974898-86974917 MS.gene69001:CDS 35.0%
AAGAATAACTCGAGAAGGTT+AGG - chr6.2:86974545-86974564 None:intergenic 35.0%
AAGTGAGAAATTCAAGGAGT+TGG + chr6.2:86975069-86975088 MS.gene69001:CDS 35.0%
ACAGATAGAAAACAAGAACC+TGG - chr6.2:86972321-86972340 None:intergenic 35.0%
AGAATAACTCGAGAAGGTTA+GGG - chr6.2:86974544-86974563 None:intergenic 35.0%
AGGCAAAGTATAGCTACTAT+TGG + chr6.2:86975337-86975356 MS.gene69001:CDS 35.0%
ATAGATACAAACTGAACCTG+TGG - chr6.2:86975127-86975146 None:intergenic 35.0%
ATAGCAAGAATAACTCGAGA+AGG - chr6.2:86974550-86974569 None:intergenic 35.0%
ATATAGTTGCTGCAATCCAA+AGG - chr6.2:86973149-86973168 None:intergenic 35.0%
ATCAGAAACTGACAATGGAA+AGG + chr6.2:86972068-86972087 MS.gene69001:CDS 35.0%
ATCATCAACTACAGAAACTG+TGG + chr6.2:86971756-86971775 MS.gene69001:CDS 35.0%
ATCTCTTGGACAAGAAGTTA+CGG + chr6.2:86971201-86971220 MS.gene69001:CDS 35.0%
CAAGAGCTCCTTAGAAAAAA+AGG + chr6.2:86973267-86973286 MS.gene69001:CDS 35.0%
CAGAATCAGAAATTACGTCA+AGG + chr6.2:86972274-86972293 MS.gene69001:CDS 35.0%
CAGTAACAACATACTCTACT+TGG - chr6.2:86973473-86973492 None:intergenic 35.0%
CATTAGAGAGAAAATTGTCG+AGG + chr6.2:86975228-86975247 MS.gene69001:CDS 35.0%
CTAGTTGTACACAAACTTTG+AGG + chr6.2:86974729-86974748 MS.gene69001:intron 35.0%
CTTGTTCCAACTTCATTTGA+AGG - chr6.2:86970935-86970954 None:intergenic 35.0%
CTTTATTCAAGCTTTCCTCA+GGG - chr6.2:86972562-86972581 None:intergenic 35.0%
GAATCTCCTTCAAATGAAGT+TGG + chr6.2:86970926-86970945 MS.gene69001:CDS 35.0%
GAATTCAAAGATAGGTGAAC+AGG - chr6.2:86973086-86973105 None:intergenic 35.0%
GAGGACTAACTAACTTAACA+CGG - chr6.2:86974001-86974020 None:intergenic 35.0%
GGAATTCGTGAAGAAAGAAA+CGG + chr6.2:86973506-86973525 MS.gene69001:CDS 35.0%
GTAACAACATACTCTACTTG+GGG - chr6.2:86973471-86973490 None:intergenic 35.0%
GTGCTAAAATATTCCAGCAA+TGG + chr6.2:86974411-86974430 MS.gene69001:intron 35.0%
TAACAACATACTCTACTTGG+GGG - chr6.2:86973470-86973489 None:intergenic 35.0%
TAGCAGACAATTGCAACTAT+TGG + chr6.2:86973681-86973700 MS.gene69001:intron 35.0%
TATAGTTGCTGCAATCCAAA+GGG - chr6.2:86973148-86973167 None:intergenic 35.0%
TCAATTACATCTGCTGATAG+AGG - chr6.2:86972691-86972710 None:intergenic 35.0%
TGTAAACTTACTACTGGTGT+CGG - chr6.2:86974676-86974695 None:intergenic 35.0%
TTCCTTCGTCACAATAGTTT+CGG - chr6.2:86975161-86975180 None:intergenic 35.0%
TTTATTCAAGCTTTCCTCAG+GGG - chr6.2:86972561-86972580 None:intergenic 35.0%
TTTCCTTCATTTGTCGTCAA+TGG + chr6.2:86970779-86970798 MS.gene69001:CDS 35.0%
! AATGCTCTTTCTGAAAGTGA+AGG + chr6.2:86973228-86973247 MS.gene69001:CDS 35.0%
! GATGGATTTGGGAAGATAAT+GGG + chr6.2:86971505-86971524 MS.gene69001:CDS 35.0%
! GGAAAATCTTCTTTGGAGAT+TGG + chr6.2:86971526-86971545 MS.gene69001:CDS 35.0%
! GTCATCTATTTGAAATGCAC+AGG - chr6.2:86972492-86972511 None:intergenic 35.0%
! TCTAACTCTAATGGACAAAC+TGG + chr6.2:86972835-86972854 MS.gene69001:CDS 35.0%
!! ACTTTTATGTCACTTCCTGA+AGG + chr6.2:86971445-86971464 MS.gene69001:CDS 35.0%
!! ATCCTTGATCTAATTTGCTC+CGG - chr6.2:86973567-86973586 None:intergenic 35.0%
!! GTTGAGTGATAGCTTTGTAA+AGG + chr6.2:86971162-86971181 MS.gene69001:CDS 35.0%
!! TCTAGAGCAGCCTTTTATTA+AGG + chr6.2:86975285-86975304 MS.gene69001:CDS 35.0%
!! TTTGGTGCGTTTGTTGATTT+CGG + chr6.2:86971106-86971125 MS.gene69001:CDS 35.0%
!!! TCGCTAAGCCTTTTTTTCTA+AGG - chr6.2:86973278-86973297 None:intergenic 35.0%
!!! TGGAAGTTCGAGATTTTTTC+CGG - chr6.2:86970838-86970857 None:intergenic 35.0%
AACCGGAGCAAATTAGATCA+AGG + chr6.2:86973562-86973581 MS.gene69001:CDS 40.0%
AAGCAACTACGAGAAGAAAC+CGG + chr6.2:86974839-86974858 MS.gene69001:CDS 40.0%
ACAAGCGAATATGCTCTTAC+CGG + chr6.2:86970816-86970835 MS.gene69001:CDS 40.0%
ACATTGACCATGAAGAAGGA+AGG + chr6.2:86971595-86971614 MS.gene69001:CDS 40.0%
ACGGATAAGGAAAAGACTTG+AGG + chr6.2:86973596-86973615 MS.gene69001:CDS 40.0%
ACTCCATTGACGACAAATGA+AGG - chr6.2:86970785-86970804 None:intergenic 40.0%
AGAAACTGTGGAAGATTCAC+TGG + chr6.2:86971768-86971787 MS.gene69001:CDS 40.0%
AGAAGATCTTGCGTCAAAAC+CGG + chr6.2:86973545-86973564 MS.gene69001:CDS 40.0%
AGGATTTCTACCATTAGCTG+AGG + chr6.2:86971474-86971493 MS.gene69001:CDS 40.0%
AGTGGCTGATCAAATTGTTG+CGG + chr6.2:86972032-86972051 MS.gene69001:CDS 40.0%
ATCACCTTCAGTTTCAGCAA+GGG - chr6.2:86974891-86974910 None:intergenic 40.0%
ATGCCAAAGTAGACACTTCT+TGG + chr6.2:86974350-86974369 MS.gene69001:intron 40.0%
ATGCGTGAAAACACTGATAC+TGG + chr6.2:86971271-86971290 MS.gene69001:CDS 40.0%
ATGCTCTGTCGGAAATTCTT+CGG + chr6.2:86970652-86970671 MS.gene69001:CDS 40.0%
ATTGTTCAATGTTGTGGTGC+AGG + chr6.2:86974783-86974802 MS.gene69001:intron 40.0%
ATTTCTTATCAGCGGATGAG+AGG - chr6.2:86974949-86974968 None:intergenic 40.0%
CAAGCATACCTCAGGAAAAA+GGG + chr6.2:86974923-86974942 MS.gene69001:CDS 40.0%
CCAAACAATGCAGAGAAATC+CGG + chr6.2:86971310-86971329 MS.gene69001:CDS 40.0%
CCCATAATATCATGCTCTGT+CGG + chr6.2:86970641-86970660 MS.gene69001:CDS 40.0%
CCGACAGAGCATGATATTAT+GGG - chr6.2:86970644-86970663 None:intergenic 40.0%
CCTGAGGAAAGCTTGAATAA+AGG + chr6.2:86972560-86972579 MS.gene69001:CDS 40.0%
CCTTTATTCAAGCTTTCCTC+AGG - chr6.2:86972563-86972582 None:intergenic 40.0%
CTAACAGCTGAAGGAAGAAT+CGG + chr6.2:86974977-86974996 MS.gene69001:CDS 40.0%
GATCAAGGATTGTTGAAGGA+CGG + chr6.2:86973577-86973596 MS.gene69001:CDS 40.0%
GATGCCTCCTATAAAGAATG+AGG + chr6.2:86971033-86971052 MS.gene69001:CDS 40.0%
GGAAATTCTTCGGTTATTCC+TGG + chr6.2:86970662-86970681 MS.gene69001:CDS 40.0%
GGAAGAATCTCAAAGAGGTT+AGG + chr6.2:86975250-86975269 MS.gene69001:CDS 40.0%
GTAAGAACCTATCCTTCCTT+CGG - chr6.2:86973331-86973350 None:intergenic 40.0%
TAAACTTTCATCAGCCACCT+CGG - chr6.2:86972112-86972131 None:intergenic 40.0%
TAATGGGAAAAACGACACCA+GGG - chr6.2:86974314-86974333 None:intergenic 40.0%
TAGTACCTGGAGTTTCAAAC+AGG + chr6.2:86973935-86973954 MS.gene69001:intron 40.0%
TCAAGGAGTTCTTCAAGACA+CGG + chr6.2:86970734-86970753 MS.gene69001:CDS 40.0%
TCATCCGCTGATAAGAAATC+CGG + chr6.2:86974950-86974969 MS.gene69001:CDS 40.0%
TCCGACAGAGCATGATATTA+TGG - chr6.2:86970645-86970664 None:intergenic 40.0%
TCCTTCGTCACAATAGTTTC+GGG - chr6.2:86975160-86975179 None:intergenic 40.0%
TCGTAGTTGCTTAACCAAAG+CGG - chr6.2:86974831-86974850 None:intergenic 40.0%
TCTTCCGGATTTCTTATCAG+CGG - chr6.2:86974957-86974976 None:intergenic 40.0%
TCTTTCACTGGAGTAGTTAC+CGG - chr6.2:86973813-86973832 None:intergenic 40.0%
TCTTTCTTCACGAATTCCTC+AGG - chr6.2:86973504-86973523 None:intergenic 40.0%
TGAAGCAGTTGCAATTGCAT+CGG + chr6.2:86972795-86972814 MS.gene69001:CDS 40.0%
TGCACAAACTACAGCAAAAC+CGG + chr6.2:86973791-86973810 MS.gene69001:CDS 40.0%
TGGCAGAAGTGAGAAATTCA+AGG + chr6.2:86975063-86975082 MS.gene69001:CDS 40.0%
TTCCATATCAGCCACAGAAA+CGG + chr6.2:86970853-86970872 MS.gene69001:CDS 40.0%
! AACTGTGAAACCGACTTTGT+TGG + chr6.2:86975043-86975062 MS.gene69001:CDS 40.0%
! AAGAATGAGGATTTGGTTCC+TGG + chr6.2:86971046-86971065 MS.gene69001:CDS 40.0%
! AGAATGAGGATTTGGTTCCT+GGG + chr6.2:86971047-86971066 MS.gene69001:CDS 40.0%
! AGGAAGATGACGATGGATTT+GGG + chr6.2:86971494-86971513 MS.gene69001:CDS 40.0%
! ATAATGGGAAAAACGACACC+AGG - chr6.2:86974315-86974334 None:intergenic 40.0%
! CAGTGTTGTTGTGAAAGACT+TGG + chr6.2:86975312-86975331 MS.gene69001:CDS 40.0%
! CGATGGATTTGGGAAGATAA+TGG + chr6.2:86971504-86971523 MS.gene69001:CDS 40.0%
! CGCAACAAACCCTTTTGTAT+TGG + chr6.2:86971666-86971685 MS.gene69001:CDS 40.0%
! GTCTCAAGTGTTGTATCTCT+TGG + chr6.2:86971187-86971206 MS.gene69001:CDS 40.0%
! TCTTCAACTTGTGCTGATAC+AGG - chr6.2:86972775-86972794 None:intergenic 40.0%
! TTACTTTGGTTCAGTCTCCT+TGG - chr6.2:86973856-86973875 None:intergenic 40.0%
!! CACGAAATTTGTTGTAGGTC+AGG + chr6.2:86971384-86971403 MS.gene69001:CDS 40.0%
!! TGTTGATTTCGGAGCTTTCA+CGG + chr6.2:86971117-86971136 MS.gene69001:CDS 40.0%
!! TTAAAGTGCGGCGTTTTGTT+CGG + chr6.2:86975368-86975387 MS.gene69001:CDS 40.0%
!! TTGTTGTGAAAGACTTGGTG+AGG + chr6.2:86975317-86975336 MS.gene69001:CDS 40.0%
AAAGCCCTTGCTGAAACTGA+AGG + chr6.2:86974884-86974903 MS.gene69001:CDS 45.0%
AACAGCTCCTTCCTTCTTCA+TGG - chr6.2:86971605-86971624 None:intergenic 45.0%
AACTGCATCACTATCTGCCT+CGG - chr6.2:86972235-86972254 None:intergenic 45.0%
AGAAATCCTTCCTCTCCTTC+AGG - chr6.2:86971463-86971482 None:intergenic 45.0%
AGAATTTGTAGCTGCAACCG+AGG + chr6.2:86972092-86972111 MS.gene69001:CDS 45.0%
AGCACTTGTGAAGCAACTTC+GGG + chr6.2:86973173-86973192 MS.gene69001:CDS 45.0%
AGCATCCACAATAGTTGTCG+AGG - chr6.2:86971800-86971819 None:intergenic 45.0%
AGCGACATTGACCATGAAGA+AGG + chr6.2:86971591-86971610 MS.gene69001:CDS 45.0%
AGCTGTTGCAGAATTGGACA+AGG + chr6.2:86971618-86971637 MS.gene69001:CDS 45.0%
AGGTGAATCTTGTACCTCCA+CGG - chr6.2:86970885-86970904 None:intergenic 45.0%
CAACAAACGCACCAAATGGT+TGG - chr6.2:86971102-86971121 None:intergenic 45.0%
CAAGAACCTGGTGTTTCTTG+AGG - chr6.2:86972309-86972328 None:intergenic 45.0%
CAAGGAGTTCTTCAAGACAC+GGG + chr6.2:86970735-86970754 MS.gene69001:CDS 45.0%
CAGCACTTGTGAAGCAACTT+CGG + chr6.2:86973172-86973191 MS.gene69001:CDS 45.0%
CCGGATTTCTCTGCATTGTT+TGG - chr6.2:86971313-86971332 None:intergenic 45.0%
CGATGATATAGCCATGCAAG+TGG + chr6.2:86973437-86973456 MS.gene69001:CDS 45.0%
CGATTCCTCGACAACTATTG+TGG + chr6.2:86971792-86971811 MS.gene69001:CDS 45.0%
CTAGAAACTTCATCGGCAAC+AGG - chr6.2:86970905-86970924 None:intergenic 45.0%
CTCACTTCTGCCAACAAAGT+CGG - chr6.2:86975056-86975075 None:intergenic 45.0%
CTTGTCAAATAGGCAACTCC+AGG - chr6.2:86970683-86970702 None:intergenic 45.0%
CTTTCATCAGCCACTTCAAC+CGG - chr6.2:86971985-86972004 None:intergenic 45.0%
GAGCATATTCGCTTGTTCTG+AGG - chr6.2:86970812-86970831 None:intergenic 45.0%
GATCACCTTCAGTTTCAGCA+AGG - chr6.2:86974892-86974911 None:intergenic 45.0%
GATGCTGAAAGCAACCAAGA+AGG + chr6.2:86971814-86971833 MS.gene69001:CDS 45.0%
GCAAGCATACCTCAGGAAAA+AGG + chr6.2:86974922-86974941 MS.gene69001:CDS 45.0%
GGATTGTTGAAGGACGGATA+AGG + chr6.2:86973583-86973602 MS.gene69001:CDS 45.0%
GGCATTACTGCTTCAGATGA+AGG + chr6.2:86972856-86972875 MS.gene69001:CDS 45.0%
GGGTTTGGAAAAGAAAAGCG+AGG + chr6.2:86973749-86973768 MS.gene69001:CDS 45.0%
GGTAACTACTCCAGTGAAAG+AGG + chr6.2:86973812-86973831 MS.gene69001:CDS 45.0%
GTACGGTGAAGAATATGACG+AGG + chr6.2:86971416-86971435 MS.gene69001:CDS 45.0%
GTGAAGAATATGACGAGGAG+TGG + chr6.2:86971421-86971440 MS.gene69001:CDS 45.0%
GTTCTTACATCCATGACAGC+AGG + chr6.2:86973343-86973362 MS.gene69001:CDS 45.0%
TACATCCATGACAGCAGGAT+CGG + chr6.2:86973348-86973367 MS.gene69001:CDS 45.0%
TACATTCACGATGCACGCAT+TGG + chr6.2:86975004-86975023 MS.gene69001:CDS 45.0%
TCACCGATCAGTACCACAAT+TGG - chr6.2:86974213-86974232 None:intergenic 45.0%
TCAGATGAAGGCTCGAGTAA+AGG + chr6.2:86972868-86972887 MS.gene69001:CDS 45.0%
TCCCGAAACTATTGTGACGA+AGG + chr6.2:86975156-86975175 MS.gene69001:CDS 45.0%
TCGAGGGAAGAATCTCAAAG+AGG + chr6.2:86975245-86975264 MS.gene69001:CDS 45.0%
TCGTCATCTTCCTCAGCTAA+TGG - chr6.2:86971487-86971506 None:intergenic 45.0%
TCTAAGGAGCTCTTGTGCTT+TGG - chr6.2:86973262-86973281 None:intergenic 45.0%
TCTTGCAGGTCTTGAACGTT+TGG - chr6.2:86971005-86971024 None:intergenic 45.0%
TCTTTCCTTGGACCCGATTT+CGG - chr6.2:86971355-86971374 None:intergenic 45.0%
TGAGAAATGCAACCCATTGC+TGG - chr6.2:86974427-86974446 None:intergenic 45.0%
TGGACAAGAAGTTACGGTGA+AGG + chr6.2:86971207-86971226 MS.gene69001:CDS 45.0%
TGTCAACGAAAGGCCAATTG+TGG + chr6.2:86974197-86974216 MS.gene69001:intron 45.0%
TGTTACTGAAGACGTTCCTG+AGG + chr6.2:86973485-86973504 MS.gene69001:CDS 45.0%
TTAGCTGAGGAAGATGACGA+TGG + chr6.2:86971487-86971506 MS.gene69001:CDS 45.0%
TTCAGGAGAGGGAACTTGAT+TGG - chr6.2:86972719-86972738 None:intergenic 45.0%
TTCAGTCTCCTTGGCTTCTA+CGG - chr6.2:86973847-86973866 None:intergenic 45.0%
TTCCGTTTCTGTGGCTGATA+TGG - chr6.2:86970858-86970877 None:intergenic 45.0%
TTGTTCTTGCACCTCTTCAG+TGG - chr6.2:86972749-86972768 None:intergenic 45.0%
! AACTGACTCACTGGTTGAAG+TGG + chr6.2:86972014-86972033 MS.gene69001:CDS 45.0%
! AAGGACCTGTTTGAAACTCC+AGG - chr6.2:86973943-86973962 None:intergenic 45.0%
! AGGTTTGTTCGGTTCAACCT+CGG + chr6.2:86973723-86973742 MS.gene69001:CDS 45.0%
! CAATGTCGAAACTGACTCAC+CGG + chr6.2:86971963-86971982 MS.gene69001:CDS 45.0%
! CGAGTTTTGCGTATCACAAG+AGG + chr6.2:86971565-86971584 MS.gene69001:CDS 45.0%
! CTGACCTTGTTGTCAACGAA+AGG + chr6.2:86974187-86974206 MS.gene69001:intron 45.0%
! GAATGAGGATTTGGTTCCTG+GGG + chr6.2:86971048-86971067 MS.gene69001:CDS 45.0%
! GAGACAGATTTTGTCTCTCG+AGG + chr6.2:86973393-86973412 MS.gene69001:CDS 45.0%
! GAGGAAGATGACGATGGATT+TGG + chr6.2:86971493-86971512 MS.gene69001:CDS 45.0%
! TATGTCACTTCCTGAAGGAG+AGG + chr6.2:86971450-86971469 MS.gene69001:CDS 45.0%
! TTGGCCTTTCGTTGACAACA+AGG - chr6.2:86974194-86974213 None:intergenic 45.0%
!! AGGCCAATTGTGGTACTGAT+CGG + chr6.2:86974207-86974226 MS.gene69001:intron 45.0%
!! CGTTTTGTTCGGTTCACTCT+TGG + chr6.2:86975379-86975398 MS.gene69001:CDS 45.0%
!! TATAAATGGTGCCGCTGTGA+AGG + chr6.2:86971843-86971862 MS.gene69001:CDS 45.0%
!! TCCTTCAGCTGTTAGTCTTC+CGG - chr6.2:86974972-86974991 None:intergenic 45.0%
!! TCGCCAAGAAGTGTCTACTT+TGG - chr6.2:86974356-86974375 None:intergenic 45.0%
!! AAGATAAAATATATTAAAAA+TGG - chr6.2:86972995-86973014 None:intergenic 5.0%
AAACACCGATCCTGCTGTCA+TGG - chr6.2:86973356-86973375 None:intergenic 50.0%
AAGCAACTTCGGGACGAAAC+AGG + chr6.2:86973183-86973202 MS.gene69001:CDS 50.0%
AATGCAGAGAAATCCGGCTC+TGG + chr6.2:86971316-86971335 MS.gene69001:CDS 50.0%
AGAACTTGTAGCTGCAACCG+AGG + chr6.2:86972215-86972234 MS.gene69001:CDS 50.0%
AGAGGCGGTTGCTGAAAGTT+TGG + chr6.2:86971870-86971889 MS.gene69001:CDS 50.0%
AGGTGGGATTCTCCGAAATC+GGG + chr6.2:86971340-86971359 MS.gene69001:CDS 50.0%
ATGCAGAGAAATCCGGCTCT+GGG + chr6.2:86971317-86971336 MS.gene69001:CDS 50.0%
ATTCTCCGAAATCGGGTCCA+AGG + chr6.2:86971347-86971366 MS.gene69001:CDS 50.0%
ATTTGTAGCTGCAACCGAGG+TGG + chr6.2:86972095-86972114 MS.gene69001:CDS 50.0%
CAAGACACGGGTCATCAACT+CGG + chr6.2:86970747-86970766 MS.gene69001:CDS 50.0%
CACGGATACTTCCGTTTCTG+TGG - chr6.2:86970867-86970886 None:intergenic 50.0%
CGAAACAGGAGCTGGAATGA+TGG + chr6.2:86973197-86973216 MS.gene69001:CDS 50.0%
CGAAGTTGCTTCACAAGTGC+TGG - chr6.2:86973174-86973193 None:intergenic 50.0%
GAGGTGGGATTCTCCGAAAT+CGG + chr6.2:86971339-86971358 MS.gene69001:CDS 50.0%
GATAGTGATGCAGTTGAGCC+TGG + chr6.2:86972240-86972259 MS.gene69001:CDS 50.0%
GATTCTGTAACAACAGGGCC+AGG - chr6.2:86972261-86972280 None:intergenic 50.0%
GATTTCGGAGCTTTCACGGA+CGG + chr6.2:86971121-86971140 MS.gene69001:CDS 50.0%
GGAAGGAGCTGTTGCAGAAT+TGG + chr6.2:86971612-86971631 MS.gene69001:CDS 50.0%
GGCTTTCGTAGAACCAGTGT+TGG - chr6.2:86970984-86971003 None:intergenic 50.0%
GTGCAGGAAATCAGCAGTAG+TGG + chr6.2:86974799-86974818 MS.gene69001:intron 50.0%
GTTGTAGGTCAGGAGTTGCA+GGG + chr6.2:86971394-86971413 MS.gene69001:CDS 50.0%
TACGAGAAGAAACCGGTGCA+GGG + chr6.2:86974846-86974865 MS.gene69001:CDS 50.0%
TCACTTCCTGAAGGAGAGGA+AGG + chr6.2:86971454-86971473 MS.gene69001:CDS 50.0%
TCCGGAAGACTAACAGCTGA+AGG + chr6.2:86974968-86974987 MS.gene69001:CDS 50.0%
TCTTCAGTGGCAGGACTTTC+AGG - chr6.2:86972736-86972755 None:intergenic 50.0%
TGAAAGTCCTGCCACTGAAG+AGG + chr6.2:86972735-86972754 MS.gene69001:CDS 50.0%
TGTTCTCGGGTTTCGAAGCA+AGG - chr6.2:86975210-86975229 None:intergenic 50.0%
TGTTGTAGGTCAGGAGTTGC+AGG + chr6.2:86971393-86971412 MS.gene69001:CDS 50.0%
! AAAAGGCGCAAGCATACCTC+AGG + chr6.2:86974915-86974934 MS.gene69001:CDS 50.0%
! AACTGACTCACCGGTTGAAG+TGG + chr6.2:86971972-86971991 MS.gene69001:CDS 50.0%
! ATGAGAGGCCCTTTTTCCTG+AGG - chr6.2:86974934-86974953 None:intergenic 50.0%
! GACAAGGCACTTGCACAAGT+GGG + chr6.2:86971634-86971653 MS.gene69001:CDS 50.0%
! TCTTTTCCAAACCCTCTCCG+AGG - chr6.2:86973743-86973762 None:intergenic 50.0%
! TGATGCTAGTTTGTCCCCTG+AGG + chr6.2:86972544-86972563 MS.gene69001:CDS 50.0%
!! AGAAACGGAAGTATCCGTGG+AGG + chr6.2:86970868-86970887 MS.gene69001:CDS 50.0%
!! CACAGAAACGGAAGTATCCG+TGG + chr6.2:86970865-86970884 MS.gene69001:CDS 50.0%
!! CGTAGAACCAGTGTTGGCAT+CGG - chr6.2:86970978-86970997 None:intergenic 50.0%
!! TGACAGCAGGATCGGTGTTT+TGG + chr6.2:86973356-86973375 MS.gene69001:CDS 50.0%
!!! GGCATCTCGCTTTTTCTTGC+AGG - chr6.2:86971019-86971038 None:intergenic 50.0%
ACAGTCCATCATCCCTGCAC+CGG - chr6.2:86974861-86974880 None:intergenic 55.0%
AGAAACCGGTGCAGGGATGA+TGG + chr6.2:86974853-86974872 MS.gene69001:CDS 55.0%
AGGTCAGGAGTTGCAGGGTA+CGG + chr6.2:86971399-86971418 MS.gene69001:CDS 55.0%
AGTAGTGGTCTCAGCCGCTT+TGG + chr6.2:86974814-86974833 MS.gene69001:CDS 55.0%
AGTGGCAGGACTTTCAGGAG+AGG - chr6.2:86972731-86972750 None:intergenic 55.0%
ATGTCTGTTCCGCTGCCCTT+TGG + chr6.2:86973130-86973149 MS.gene69001:intron 55.0%
CCAGCTCCTCAAGAAACACC+AGG + chr6.2:86972300-86972319 MS.gene69001:CDS 55.0%
CCTAAGTCCGATGCCAACAC+TGG + chr6.2:86970968-86970987 MS.gene69001:CDS 55.0%
CCTGGTGTTTCTTGAGGAGC+TGG - chr6.2:86972303-86972322 None:intergenic 55.0%
CGCCTCTGTTTCCTTCACAG+CGG - chr6.2:86971857-86971876 None:intergenic 55.0%
CGCTGTGAAGGAAACAGAGG+CGG + chr6.2:86971855-86971874 MS.gene69001:CDS 55.0%
CTACGAGAAGAAACCGGTGC+AGG + chr6.2:86974845-86974864 MS.gene69001:CDS 55.0%
GCAACTGCCGAAGGAAGGAT+AGG + chr6.2:86973321-86973340 MS.gene69001:CDS 55.0%
GTGGCAGGACTTTCAGGAGA+GGG - chr6.2:86972730-86972749 None:intergenic 55.0%
GTTCAACCTCGGAGAGGGTT+TGG + chr6.2:86973734-86973753 MS.gene69001:CDS 55.0%
GTTCGGTTCAACCTCGGAGA+GGG + chr6.2:86973729-86973748 MS.gene69001:CDS 55.0%
TCTTGCACCTCTTCAGTGGC+AGG - chr6.2:86972745-86972764 None:intergenic 55.0%
TGCCGCTGTGAAGGAAACAG+AGG + chr6.2:86971852-86971871 MS.gene69001:CDS 55.0%
TGCTGCAATCCAAAGGGCAG+CGG - chr6.2:86973142-86973161 None:intergenic 55.0%
TGTTCGGTTCAACCTCGGAG+AGG + chr6.2:86973728-86973747 MS.gene69001:CDS 55.0%
! GCAAGTTGCTGCTTGTCCAC+AGG + chr6.2:86975108-86975127 MS.gene69001:CDS 55.0%
! GGACAAGGCACTTGCACAAG+TGG + chr6.2:86971633-86971652 MS.gene69001:CDS 55.0%
! GGTTCCTGGGGCAGCTTTTA+CGG + chr6.2:86971060-86971079 MS.gene69001:CDS 55.0%
! GTTCCTGGGGCAGCTTTTAC+GGG + chr6.2:86971061-86971080 MS.gene69001:CDS 55.0%
! TTCCTGGGGCAGCTTTTACG+GGG + chr6.2:86971062-86971081 MS.gene69001:CDS 55.0%
!! CCAGTGTTGGCATCGGACTT+AGG - chr6.2:86970971-86970990 None:intergenic 55.0%
AGAATCCCACCTCCCAGAGC+CGG - chr6.2:86971332-86971351 None:intergenic 60.0%
CCAGAGCAACTGCCGAAGGA+AGG + chr6.2:86973316-86973335 MS.gene69001:CDS 60.0%
CCTTCCTTCGGCAGTTGCTC+TGG - chr6.2:86973319-86973338 None:intergenic 60.0%
CTTCGGGACGAAACAGGAGC+TGG + chr6.2:86973189-86973208 MS.gene69001:CDS 60.0%
GCAACCAGAGCAACTGCCGA+AGG + chr6.2:86973312-86973331 MS.gene69001:CDS 60.0%
GCAGCAGGCTCCTCTTTCAC+TGG - chr6.2:86973825-86973844 None:intergenic 60.0%
TCCTTGGCTTCTACGGCAGC+AGG - chr6.2:86973840-86973859 None:intergenic 60.0%
TTCCCCGTAAAAGCTGCCCC+AGG - chr6.2:86971067-86971086 None:intergenic 60.0%
!! AGAAATCCGGCTCTGGGAGG+TGG + chr6.2:86971323-86971342 MS.gene69001:CDS 60.0%
!! CAGAGAAATCCGGCTCTGGG+AGG + chr6.2:86971320-86971339 MS.gene69001:CDS 60.0%
!! GAAATCCGGCTCTGGGAGGT+GGG + chr6.2:86971324-86971343 MS.gene69001:CDS 60.0%
GCCTGCTGCCGTAGAAGCCA+AGG + chr6.2:86973836-86973855 MS.gene69001:CDS 65.0%
GGGGCACGCAGCCACTTGCA+TGG - chr6.2:86973451-86973470 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 86970635 86975438 86970635 ID=MS.gene69001
chr6.2 mRNA 86970635 86975438 86970635 ID=MS.gene69001.t1;Parent=MS.gene69001
chr6.2 exon 86970635 86972321 86970635 ID=MS.gene69001.t1.exon1;Parent=MS.gene69001.t1
chr6.2 CDS 86970635 86972321 86970635 ID=cds.MS.gene69001.t1;Parent=MS.gene69001.t1
chr6.2 exon 86972507 86972581 86972507 ID=MS.gene69001.t1.exon2;Parent=MS.gene69001.t1
chr6.2 CDS 86972507 86972581 86972507 ID=cds.MS.gene69001.t1;Parent=MS.gene69001.t1
chr6.2 exon 86972701 86972889 86972701 ID=MS.gene69001.t1.exon3;Parent=MS.gene69001.t1
chr6.2 CDS 86972701 86972889 86972701 ID=cds.MS.gene69001.t1;Parent=MS.gene69001.t1
chr6.2 exon 86973160 86973623 86973160 ID=MS.gene69001.t1.exon4;Parent=MS.gene69001.t1
chr6.2 CDS 86973160 86973623 86973160 ID=cds.MS.gene69001.t1;Parent=MS.gene69001.t1
chr6.2 exon 86973684 86973871 86973684 ID=MS.gene69001.t1.exon5;Parent=MS.gene69001.t1
chr6.2 CDS 86973684 86973871 86973684 ID=cds.MS.gene69001.t1;Parent=MS.gene69001.t1
chr6.2 exon 86974805 86975438 86974805 ID=MS.gene69001.t1.exon6;Parent=MS.gene69001.t1
chr6.2 CDS 86974805 86975438 86974805 ID=cds.MS.gene69001.t1;Parent=MS.gene69001.t1
Gene Sequence

>MS.gene69001

ATGAATCCCATAATATCATGCTCTGTCGGAAATTCTTCGGTTATTCCTGGAGTTGCCTATTTGACAAGAAAGAACAACTCGTTAACTAGACTCAACTTTTCAAGGAGTTCTTCAAGACACGGGTCATCAACTCGGAGATTTCTCTTTCCTTCATTTGTCGTCAATGGAGTTTTTCCTCAGAACAAGCGAATATGCTCTTACCGGAAAAAATCTCGAACTTCCATATCAGCCACAGAAACGGAAGTATCCGTGGAGGTACAAGATTCACCTGTTGCCGATGAAGTTTCTAGTGAATCTCCTTCAAATGAAGTTGGAACAAGTGAAAACTCATTTCCTAAGTCCGATGCCAACACTGGTTCTACGAAAGCCAAACGTTCAAGACCTGCAAGAAAAAGCGAGATGCCTCCTATAAAGAATGAGGATTTGGTTCCTGGGGCAGCTTTTACGGGGAAAGTAAAATCTATCCAACCATTTGGTGCGTTTGTTGATTTCGGAGCTTTCACGGACGGACTTGTTCATATTTCAATGTTGAGTGATAGCTTTGTAAAGGATGTCTCAAGTGTTGTATCTCTTGGACAAGAAGTTACGGTGAAGGTGATTGAAGTGAATGCTGAAACTAAGCGTATATCTCTGTCTATGCGTGAAAACACTGATACTGGTAAACGTAATGATGCACCAAACAATGCAGAGAAATCCGGCTCTGGGAGGTGGGATTCTCCGAAATCGGGTCCAAGGAAAGATAAGAAAAACACGAAATTTGTTGTAGGTCAGGAGTTGCAGGGTACGGTGAAGAATATGACGAGGAGTGGTACTTTTATGTCACTTCCTGAAGGAGAGGAAGGATTTCTACCATTAGCTGAGGAAGATGACGATGGATTTGGGAAGATAATGGGAAAATCTTCTTTGGAGATTGGTCGAGAAGTTAGCGTACGAGTTTTGCGTATCACAAGAGGACAAGCGACATTGACCATGAAGAAGGAAGGAGCTGTTGCAGAATTGGACAAGGCACTTGCACAAGTGGGTGATGACGTCGCAACAAACCCTTTTGTATTGGCTTTTCATAGAAATAAGGATATTGCTAAATTTTTGGATCAGAGGGAGAAACTTCAGAGTGAAGTTAAATCATCAACTACAGAAACTGTGGAAGATTCACTGGTCGATTCCTCGACAACTATTGTGGATGCTGAAAGCAACCAAGAAGGTAGTATTATAAATGGTGCCGCTGTGAAGGAAACAGAGGCGGTTGCTGAAAGTTTGGCTTCAGAAGAAGATTTAGATGCTGTAAATTCAATTATCGAGGAAGCTATTCAGACAGATATTGCAACGAGCAATGTCGAAACTGACTCACCGGTTGAAGTGGCTGATGAAAGTTTAATAGAAACTGACTCACTGGTTGAAGTGGCTGATCAAATTGTTGCGGAAGATGAAAAACAATCAGAAACTGACAATGGAAAGGAAGAATTTGTAGCTGCAACCGAGGTGGCTGATGAAAGTTTAATAGAAACTGACTCACTGGTTGAAGTGGCTGATCAAATTGTTGCGGAAGATGAAAAACTATCAGAAACTGACAATGGAAAGGAAGAACTTGTAGCTGCAACCGAGGCAGATAGTGATGCAGTTGAGCCTGGCCCTGTTGTTACAGAATCAGAAATTACGTCAAGGGCACCAGCTCCTCAAGAAACACCAGGTTCTTGTTTTCTATCTGTCTCTCTTTCTGCCCTTCTATCTCATTCGTATTTACATATGGAAATATTGGTCGTATGTCATTATCCGAAATTACAGCTAAAATCAAACATATTTTGTGCAGTAAGATGCATGTTTAAGAGTTTCTTATTAACTTAACTAATAATATTTCCTGTGCATTTCAAATAGATGACAATGTTGCAGCTGTTTCAGAGAACAATGAGATTGATGCTAGTTTGTCCCCTGAGGAAAGCTTGAATAAAGGTTATGAATGAAATTGATAGAAAGTTTTTTGAGCTTGTTTGAACTTTATATTTAAATCATATATTACACCCCTTTCTTTTCCTATAGTATCCTATTAACTTTGAATCCTCTATCAGCAGATGTAATTGAAGAAACCAATCAAGTTCCCTCTCCTGAAAGTCCTGCCACTGAAGAGGTGCAAGAACAAACACCTGTATCAGCACAAGTTGAAGATGAAGCAGTTGCAATTGCATCGGAGACAAACAGCAACTTATCTAACTCTAATGGACAAACTGGCATTACTGCTTCAGATGAAGGCTCGAGTAAAGGTTTCCATTTCATCAAACAGACGTAAATATGTTAGACAGATTTGAATTTATACATGTATTTCAGTTTTTACATGCAAAAGAGAAGAAAAAAAGAATATACTTCCATTTTTAATATATTTTATCTTATATAATAAGCGCTTATCTTATAAGCTTTAATTAGGTTGTTTATCGAAACAAGGTCATAGTTTTCTAACCTGTTCACCTATCTTTGAATTCTTAGATAAGACTTCTAATTGTTAAATGTCTGTTCCGCTGCCCTTTGGATTGCAGCAACTATATCACCAGCACTTGTGAAGCAACTTCGGGACGAAACAGGAGCTGGAATGATGGACTGCAAAAATGCTCTTTCTGAAAGTGAAGGTGACATTACCAAAGCACAAGAGCTCCTTAGAAAAAAAGGCTTAGCGAGTGCAGACAAAAAAGCAACCAGAGCAACTGCCGAAGGAAGGATAGGTTCTTACATCCATGACAGCAGGATCGGTGTTTTGGTAGAAGTAAACTGCGAGACAGATTTTGTCTCTCGAGGTGAAATTTTCAAAGAGCTTGTCGATGATATAGCCATGCAAGTGGCTGCGTGCCCCCAAGTAGAGTATGTTGTTACTGAAGACGTTCCTGAGGAATTCGTGAAGAAAGAAACGGAGATAGAAATGCAAAAAGAAGATCTTGCGTCAAAACCGGAGCAAATTAGATCAAGGATTGTTGAAGGACGGATAAGGAAAAGACTTGAGGATTTAGCATTGCTTGAGCAGCCCTACATCAAGAATGATAAAGTAACAGTAAAGGATATGGTTTAGCAGACAATTGCAACTATTGGAGAAAATATGAAAGTTACAAGGTTTGTTCGGTTCAACCTCGGAGAGGGTTTGGAAAAGAAAAGCGAGGATTTTGCTGCTGAAGTCGCTGCACAAACTACAGCAAAACCGGTAACTACTCCAGTGAAAGAGGAGCCTGCTGCCGTAGAAGCCAAGGAGACTGAACCAAAGTAAGTATAGTTCAATGAATTTCTACTTGTTATTGAGTTATTTAATTATGAAATTTTGGTAAATAGTACCTGGAGTTTCAAACAGGTCCTTGATTTTTTTTCCATGTCAAACTAGTTATTTCTTCTCCGTGTTAAGTTAGTTAGTCCTCTTTGTTTAAAAACATCAACAATGTAGGCCCAAACTTCATTTTTGTTTTTAAAAGGTACATTACATATTCAATTAATCAAGGTTACATCTAAATTACATCACAATGACTGTTACAATATCTAATCCATTAAAATTGACATGATATATTTTTGTTTTTATCTAAATTTCTGACCTTGTTGTCAACGAAAGGCCAATTGTGGTACTGATCGGTGAAACATTCTTTATAGAGATAAAAGACTAATTTGACACAAAAAAAGGATAAAGGATGGCTTTTAAATTAAGTTAAAGGAACCCTGGTGTCGTTTTTCCCATTATGAAATTTCCATAATTATGCCAAAGTAGACACTTCTTGGCGATTGCATTAACTTTATGTACTAATTGGCTCAGCTGTGTGCTAAAATATTCCAGCAATGGGTTGCATTTCTCATTTTCCCACTCTTTTTACAAATGATGTGAAGAACTGACTGACTTTTGAAATCTACAAACTGTACAAGGGTGCTAAATTTTCCTGAATATTTTAACCCTAACCTTCTCGAGTTATTCTTGCTATAGACAAAACTTAACCTAAGCTGTGACTGTATGATTTGTGAGTTGAAGTCTATGAAAGCACTGACACAAATACGGACATTTGACATGACACTAACACTGACATGCCGACACCAGTAGTAAGTTTACAAAATGCAACAACTGAATGTAACATGTGTACGTGCTAGTTGTACACAAACTTTGAGGAAAAAATGGATGTGTTTGACGCAAATATTAAATTGTTCAATGTTGTGGTGCAGGAAATCAGCAGTAGTGGTCTCAGCCGCTTTGGTTAAGCAACTACGAGAAGAAACCGGTGCAGGGATGATGGACTGTAAGAAAGCCCTTGCTGAAACTGAAGGTGATCTTGAAAAGGCGCAAGCATACCTCAGGAAAAAGGGCCTCTCATCCGCTGATAAGAAATCCGGAAGACTAACAGCTGAAGGAAGAATCGGTACATACATTCACGATGCACGCATTGGTGTTCTAATTGAAGTGAACTGTGAAACCGACTTTGTTGGCAGAAGTGAGAAATTCAAGGAGTTGGTTGATGATCTTGCAATGCAAGTTGCTGCTTGTCCACAGGTTCAGTTTGTATCTATTGAAGATATTCCCGAAACTATTGTGACGAAGGAAAAAGAACTTGAGATGCAAAGAGAAGACCTTGCTTCGAAACCCGAGAACATTAGAGAGAAAATTGTCGAGGGAAGAATCTCAAAGAGGTTAGGAGAGCTTGCTCTTCTAGAGCAGCCTTTTATTAAGGATGACAGTGTTGTTGTGAAAGACTTGGTGAGGCAAAGTATAGCTACTATTGGAGAGAATATTAAAGTGCGGCGTTTTGTTCGGTTCACTCTTGGAGAAACAGTTCAAAAAGAAACAGCTGTACCAGCATAG

Protein sequence

>MS.gene69001.t1

MNPIISCSVGNSSVIPGVAYLTRKNNSLTRLNFSRSSSRHGSSTRRFLFPSFVVNGVFPQNKRICSYRKKSRTSISATETEVSVEVQDSPVADEVSSESPSNEVGTSENSFPKSDANTGSTKAKRSRPARKSEMPPIKNEDLVPGAAFTGKVKSIQPFGAFVDFGAFTDGLVHISMLSDSFVKDVSSVVSLGQEVTVKVIEVNAETKRISLSMRENTDTGKRNDAPNNAEKSGSGRWDSPKSGPRKDKKNTKFVVGQELQGTVKNMTRSGTFMSLPEGEEGFLPLAEEDDDGFGKIMGKSSLEIGREVSVRVLRITRGQATLTMKKEGAVAELDKALAQVGDDVATNPFVLAFHRNKDIAKFLDQREKLQSEVKSSTTETVEDSLVDSSTTIVDAESNQEGSIINGAAVKETEAVAESLASEEDLDAVNSIIEEAIQTDIATSNVETDSPVEVADESLIETDSLVEVADQIVAEDEKQSETDNGKEEFVAATEVADESLIETDSLVEVADQIVAEDEKLSETDNGKEELVAATEADSDAVEPGPVVTESEITSRAPAPQETPDDNVAAVSENNEIDASLSPEESLNKDVIEETNQVPSPESPATEEVQEQTPVSAQVEDEAVAIASETNSNLSNSNGQTGITASDEGSSKATISPALVKQLRDETGAGMMDCKNALSESEGDITKAQELLRKKGLASADKKATRATAEGRIGSYIHDSRIGVLVEVNCETDFVSRGEIFKELVDDIAMQVAACPQVEYVVTEDVPEEFVKKETEIEMQKEDLASKPEQIRSRIVEGRIRKRLEDLQTIATIGENMKVTRFVRFNLGEGLEKKSEDFAAEVAAQTTAKPVTTPVKEEPAAVEAKETEPKKSAVVVSAALVKQLREETGAGMMDCKKALAETEGDLEKAQAYLRKKGLSSADKKSGRLTAEGRIGTYIHDARIGVLIEVNCETDFVGRSEKFKELVDDLAMQVAACPQVQFVSIEDIPETIVTKEKELEMQREDLASKPENIREKIVEGRISKRLGELALLEQPFIKDDSVVVKDLVRQSIATIGENIKVRRFVRFTLGETVQKETAVPA