Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70170.t1 | XP_003630360.1 | 98.3 | 589 | 10 | 0 | 1 | 589 | 1 | 589 | 0.00E+00 | 1187.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70170.t1 | Q7XJJ7 | 43.2 | 586 | 325 | 6 | 11 | 589 | 4 | 588 | 4.5e-130 | 466.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70170.t1 | G7LFP2 | 98.3 | 589 | 10 | 0 | 1 | 589 | 1 | 589 | 0.0e+00 | 1187.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene70170 | 0.803909 | 2.78E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene70170 | 0.811369 | 7.25E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene70170 | 0.827643 | 1.40E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene70170 | 0.816959 | 4.23E-52 | -1.69E-46 |
| MS.gene049369 | MS.gene70170 | 0.800018 | 1.75E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene70170 | 0.804867 | 1.76E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene70170 | 0.827749 | 1.32E-54 | -1.69E-46 |
| MS.gene050380 | MS.gene70170 | -0.814228 | 1.71E-51 | -1.69E-46 |
| MS.gene050499 | MS.gene70170 | 0.823383 | 1.43E-53 | -1.69E-46 |
| MS.gene050520 | MS.gene70170 | 0.809383 | 1.94E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene70170 | 0.807426 | 5.09E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene70170 | 0.828004 | 1.14E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene70170 | 0.805338 | 1.40E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene70170 | 0.863621 | 2.18E-64 | -1.69E-46 |
| MS.gene050772 | MS.gene70170 | 0.815 | 1.16E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene70170 | 0.802673 | 5.02E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene70170 | 0.854694 | 1.04E-61 | -1.69E-46 |
| MS.gene051387 | MS.gene70170 | 0.852154 | 5.56E-61 | -1.69E-46 |
| MS.gene051666 | MS.gene70170 | 0.804342 | 2.26E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene70170 | 0.812849 | 3.45E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene70170 | 0.85253 | 4.35E-61 | -1.69E-46 |
| MS.gene051858 | MS.gene70170 | 0.804277 | 2.33E-49 | -1.69E-46 |
| MS.gene051941 | MS.gene70170 | 0.809395 | 1.93E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene70170 | 0.826466 | 2.67E-54 | -1.69E-46 |
| MS.gene052413 | MS.gene70170 | 0.805629 | 1.22E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene70170 | 0.816629 | 5.01E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene70170 | 0.829119 | 6.15E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene70170 | 0.810565 | 1.08E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene70170 | 0.818221 | 2.19E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene70170 | 0.820523 | 6.56E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene70170 | 0.817963 | 2.51E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene70170 | 0.805607 | 1.23E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene70170 | 0.8116 | 6.45E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene70170 | 0.814372 | 1.59E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene70170 | 0.803142 | 4.01E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene70170 | 0.813583 | 2.38E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene70170 | 0.810041 | 1.40E-50 | -1.69E-46 |
| MS.gene053207 | MS.gene70170 | 0.812472 | 4.17E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene70170 | 0.820188 | 7.83E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene70170 | 0.815824 | 7.59E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene70170 | 0.838705 | 2.45E-57 | -1.69E-46 |
| MS.gene053574 | MS.gene70170 | 0.847915 | 8.55E-60 | -1.69E-46 |
| MS.gene053626 | MS.gene70170 | 0.814694 | 1.35E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene70170 | 0.825754 | 3.95E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene70170 | 0.814129 | 1.80E-51 | -1.69E-46 |
| MS.gene054003 | MS.gene70170 | 0.813607 | 2.35E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene70170 | 0.818284 | 2.12E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene70170 | 0.814489 | 1.50E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene70170 | 0.848044 | 7.87E-60 | -1.69E-46 |
| MS.gene05492 | MS.gene70170 | 0.816963 | 4.22E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene70170 | 0.826345 | 2.86E-54 | -1.69E-46 |
| MS.gene055486 | MS.gene70170 | 0.839716 | 1.34E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene70170 | 0.803054 | 4.19E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene70170 | 0.820694 | 5.99E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene70170 | 0.804139 | 2.49E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene70170 | 0.85383 | 1.84E-61 | -1.69E-46 |
| MS.gene055911 | MS.gene70170 | 0.85788 | 1.21E-62 | -1.69E-46 |
| MS.gene055941 | MS.gene70170 | 0.819301 | 1.25E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene70170 | 0.816235 | 6.14E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene70170 | 0.864826 | 9.19E-65 | -1.69E-46 |
| MS.gene056409 | MS.gene70170 | 0.810259 | 1.26E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene70170 | 0.801517 | 8.68E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene70170 | 0.810192 | 1.30E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene70170 | 0.817481 | 3.22E-52 | -1.69E-46 |
| MS.gene056942 | MS.gene70170 | 0.822699 | 2.06E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene70170 | 0.802861 | 4.59E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene70170 | 0.807773 | 4.29E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene70170 | 0.830581 | 2.71E-55 | -1.69E-46 |
| MS.gene057285 | MS.gene70170 | 0.842423 | 2.61E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene70170 | 0.820798 | 5.67E-53 | -1.69E-46 |
| MS.gene057506 | MS.gene70170 | -0.817654 | 2.95E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene70170 | 0.821941 | 3.09E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene70170 | 0.803801 | 2.93E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene70170 | 0.834019 | 3.82E-56 | -1.69E-46 |
| MS.gene05787 | MS.gene70170 | 0.814864 | 1.24E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene70170 | 0.813497 | 2.48E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene70170 | 0.805191 | 1.50E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene70170 | 0.808104 | 3.65E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene70170 | 0.802234 | 6.18E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene70170 | 0.809664 | 1.69E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene70170 | 0.826083 | 3.30E-54 | -1.69E-46 |
| MS.gene058444 | MS.gene70170 | 0.808449 | 3.08E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene70170 | 0.826895 | 2.11E-54 | -1.69E-46 |
| MS.gene058790 | MS.gene70170 | 0.806953 | 6.40E-50 | -1.69E-46 |
| MS.gene05883 | MS.gene70170 | 0.837773 | 4.26E-57 | -1.69E-46 |
| MS.gene058948 | MS.gene70170 | 0.801011 | 1.10E-48 | -1.69E-46 |
| MS.gene059023 | MS.gene70170 | 0.801515 | 8.68E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene70170 | 0.809725 | 1.64E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene70170 | 0.813579 | 2.38E-51 | -1.69E-46 |
| MS.gene059368 | MS.gene70170 | 0.814192 | 1.75E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene70170 | 0.822032 | 2.94E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene70170 | 0.803862 | 2.85E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene70170 | 0.804631 | 1.97E-49 | -1.69E-46 |
| MS.gene059801 | MS.gene70170 | 0.81532 | 9.82E-52 | -1.69E-46 |
| MS.gene060372 | MS.gene70170 | 0.800324 | 1.52E-48 | -1.69E-46 |
| MS.gene060482 | MS.gene70170 | 0.842173 | 3.04E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene70170 | 0.811206 | 7.86E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene70170 | 0.867815 | 1.04E-65 | -1.69E-46 |
| MS.gene06092 | MS.gene70170 | 0.824248 | 8.95E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene70170 | 0.812473 | 4.17E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70170.t1 | MTR_8g094740 | 98.302 | 589 | 10 | 0 | 1 | 589 | 1 | 589 | 0.0 | 1204 |
| MS.gene70170.t1 | MTR_8g094740 | 97.952 | 537 | 11 | 0 | 1 | 537 | 1 | 537 | 0.0 | 1097 |
| MS.gene70170.t1 | MTR_3g096980 | 78.947 | 589 | 123 | 1 | 1 | 589 | 1 | 588 | 0.0 | 960 |
| MS.gene70170.t1 | MTR_2g010180 | 42.542 | 590 | 329 | 6 | 7 | 590 | 3 | 588 | 2.80e-156 | 461 |
| MS.gene70170.t1 | MTR_2g010180 | 42.445 | 589 | 329 | 6 | 7 | 589 | 3 | 587 | 6.98e-156 | 460 |
| MS.gene70170.t1 | MTR_2g010180 | 42.445 | 589 | 329 | 6 | 7 | 589 | 17 | 601 | 9.32e-156 | 461 |
| MS.gene70170.t1 | MTR_3g048950 | 31.306 | 444 | 251 | 10 | 181 | 584 | 85 | 514 | 4.66e-42 | 159 |
| MS.gene70170.t1 | MTR_8g095600 | 25.325 | 462 | 271 | 16 | 119 | 566 | 147 | 548 | 1.71e-26 | 114 |
| MS.gene70170.t1 | MTR_8g095600 | 25.325 | 462 | 271 | 16 | 119 | 566 | 163 | 564 | 1.85e-26 | 114 |
| MS.gene70170.t1 | MTR_8g095600 | 25.325 | 462 | 271 | 16 | 119 | 566 | 147 | 548 | 2.25e-26 | 114 |
| MS.gene70170.t1 | MTR_1g082750 | 40.940 | 149 | 87 | 1 | 203 | 350 | 27 | 175 | 1.12e-25 | 110 |
| MS.gene70170.t1 | MTR_8g095600 | 29.851 | 268 | 174 | 7 | 119 | 384 | 147 | 402 | 2.93e-24 | 107 |
| MS.gene70170.t1 | MTR_4g074030 | 24.486 | 486 | 324 | 10 | 131 | 589 | 29 | 498 | 6.06e-23 | 103 |
| MS.gene70170.t1 | MTR_8g080870 | 25.249 | 503 | 301 | 19 | 128 | 589 | 3 | 471 | 1.40e-21 | 98.6 |
| MS.gene70170.t1 | MTR_4g094205 | 39.333 | 150 | 90 | 1 | 202 | 350 | 72 | 221 | 2.10e-21 | 99.0 |
| MS.gene70170.t1 | MTR_8g080840 | 28.571 | 273 | 177 | 7 | 117 | 382 | 26 | 287 | 3.52e-19 | 91.7 |
| MS.gene70170.t1 | MTR_8g080880 | 23.194 | 526 | 317 | 18 | 112 | 589 | 13 | 499 | 7.19e-18 | 87.4 |
| MS.gene70170.t1 | MTR_8g080890 | 27.007 | 274 | 187 | 6 | 116 | 382 | 21 | 288 | 3.62e-17 | 85.1 |
| MS.gene70170.t1 | MTR_8g097220 | 28.571 | 259 | 163 | 8 | 116 | 363 | 22 | 269 | 1.14e-16 | 83.6 |
| MS.gene70170.t1 | MTR_8g107280 | 35.664 | 143 | 91 | 1 | 209 | 350 | 69 | 211 | 2.36e-15 | 79.7 |
| MS.gene70170.t1 | MTR_8g107280 | 35.664 | 143 | 91 | 1 | 209 | 350 | 69 | 211 | 2.42e-15 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70170.t1 | AT5G64440 | 43.728 | 574 | 315 | 6 | 23 | 589 | 16 | 588 | 6.26e-160 | 471 |
| MS.gene70170.t1 | AT3G25660 | 28.273 | 527 | 312 | 15 | 102 | 584 | 11 | 515 | 2.41e-42 | 160 |
| MS.gene70170.t1 | AT5G07360 | 26.768 | 396 | 239 | 11 | 176 | 566 | 241 | 590 | 9.86e-25 | 109 |
| MS.gene70170.t1 | AT5G07360 | 26.768 | 396 | 239 | 11 | 176 | 566 | 241 | 590 | 9.86e-25 | 109 |
| MS.gene70170.t1 | AT1G08980 | 38.926 | 149 | 90 | 1 | 203 | 350 | 28 | 176 | 4.23e-22 | 99.8 |
| MS.gene70170.t1 | AT5G09420 | 38.926 | 149 | 90 | 1 | 203 | 350 | 71 | 219 | 3.27e-21 | 98.2 |
| MS.gene70170.t1 | AT5G07360 | 26.010 | 396 | 235 | 12 | 176 | 566 | 241 | 583 | 4.32e-20 | 94.7 |
| MS.gene70170.t1 | AT4G34880 | 26.978 | 493 | 294 | 16 | 131 | 589 | 39 | 499 | 4.99e-18 | 87.8 |
| MS.gene70170.t1 | AT3G17970 | 35.374 | 147 | 94 | 1 | 205 | 350 | 60 | 206 | 9.60e-18 | 87.0 |
| MS.gene70170.t1 | AT3G17970 | 35.374 | 147 | 94 | 1 | 205 | 350 | 60 | 206 | 1.36e-17 | 86.7 |
Find 152 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGGTTGGCTATGATAAAT+TGG | 0.182422 | 4.1:-7837392 | MS.gene70170:intron |
| AGGCGCATCACTTCTATTTC+TGG | 0.191278 | 4.1:+7838528 | None:intergenic |
| TTCAGTCGTATACCTCATTC+TGG | 0.198376 | 4.1:-7839746 | MS.gene70170:CDS |
| TATCTCCAAGCCAATGTTAA+AGG | 0.203404 | 4.1:-7842492 | MS.gene70170:intron |
| GAAGGCTTTGTTCCATTAAT+TGG | 0.220387 | 4.1:+7841488 | None:intergenic |
| CCGATTGGTCTTCAGTTTAT+AGG | 0.231895 | 4.1:-7837364 | MS.gene70170:CDS |
| CTCTTGGAGTGTCGAATAAT+TGG | 0.241464 | 4.1:-7842083 | MS.gene70170:CDS |
| ACTTTACAAAGACCAATTAA+TGG | 0.252014 | 4.1:-7841500 | MS.gene70170:CDS |
| AGCGGTATAAATCCACATTA+TGG | 0.252464 | 4.1:-7840466 | MS.gene70170:CDS |
| CCTGTTGCACTTGGTGTTGA+TGG | 0.252653 | 4.1:-7840229 | MS.gene70170:CDS |
| AGAAGTTAAATCCCTGGATT+TGG | 0.297689 | 4.1:-7841573 | MS.gene70170:CDS |
| ATATTAAAGCTCAGAAAATT+AGG | 0.299893 | 4.1:-7838288 | MS.gene70170:intron |
| TTCAGTGCATCATCTTGAAT+TGG | 0.302063 | 4.1:+7837717 | None:intergenic |
| CTCAAAACCTACACTTCAAA+TGG | 0.320556 | 4.1:-7841135 | MS.gene70170:CDS |
| ATTGGTCTTTGTAAAGTTGT+AGG | 0.326582 | 4.1:+7841506 | None:intergenic |
| AACAAGCTCCAGGGTCATTA+TGG | 0.331195 | 4.1:-7839005 | MS.gene70170:CDS |
| AAAATCAAGTTGGCAAAGTA+TGG | 0.332059 | 4.1:-7839203 | MS.gene70170:CDS |
| TTCAGTTTATAGGAAGGCCT+TGG | 0.333182 | 4.1:-7837354 | MS.gene70170:CDS |
| CAAGATTGTCGCTTGGCTCT+TGG | 0.340554 | 4.1:-7842099 | MS.gene70170:CDS |
| TCAGAGTTATTCCTCTAAAC+TGG | 0.350064 | 4.1:-7839633 | MS.gene70170:intron |
| GCACTACCTGTAGTAGGATA+TGG | 0.351561 | 4.1:+7840708 | None:intergenic |
| ATACCAACTGTCCAGTTTAG+AGG | 0.360938 | 4.1:+7839622 | None:intergenic |
| TTAATTCAGCTGCACTTATT+CGG | 0.367490 | 4.1:-7837553 | MS.gene70170:intron |
| ATTTAATCGGTGGACCATAA+TGG | 0.369054 | 4.1:-7841465 | MS.gene70170:CDS |
| AGATAGAATTCAGTACTATC+AGG | 0.371476 | 4.1:+7842510 | None:intergenic |
| GAACAAAGCCTTCATTTAAT+CGG | 0.371810 | 4.1:-7841478 | MS.gene70170:CDS |
| GTCATTGTGTCACCAACAAC+AGG | 0.375005 | 4.1:-7837846 | MS.gene70170:CDS |
| TGAAGAAATTTAGCAGACTT+TGG | 0.375244 | 4.1:-7838364 | MS.gene70170:intron |
| AGCTCTGAAATAGTCCATTA+TGG | 0.384221 | 4.1:+7841451 | None:intergenic |
| TTTGATATTGACTTTGTTAA+GGG | 0.389430 | 4.1:+7839224 | None:intergenic |
| CTGTTGCACTTGGTGTTGAT+GGG | 0.394978 | 4.1:-7840228 | MS.gene70170:CDS |
| CATAATGCCAGTAGGATTGC+AGG | 0.396801 | 4.1:-7840298 | MS.gene70170:CDS |
| GCAGCACTTTGTGGTGTAGT+TGG | 0.398790 | 4.1:-7839782 | MS.gene70170:CDS |
| TCCACGCATGACTGGAATCT+TGG | 0.401729 | 4.1:-7842123 | MS.gene70170:CDS |
| ATTTCATCCTTGATAGCAAC+AGG | 0.402535 | 4.1:+7840741 | None:intergenic |
| CAGTGCTCTGAACAAGCTCC+AGG | 0.403136 | 4.1:-7839015 | MS.gene70170:CDS |
| ACTTCCTGCTGTCACTGTTC+CGG | 0.404436 | 4.1:-7837504 | MS.gene70170:intron |
| TCTGCCGCTGTGGTGTCGGC+AGG | 0.410259 | 4.1:-7840259 | MS.gene70170:CDS |
| CAGGTTGGCTATGATAAATT+GGG | 0.415411 | 4.1:-7837391 | MS.gene70170:CDS |
| GGGAAATAATCTTATTCATA+AGG | 0.416845 | 4.1:-7842036 | MS.gene70170:intron |
| CAAACCTTCAAAATGATGTA+AGG | 0.417619 | 4.1:+7841769 | None:intergenic |
| GATAAATTGGGTTTACCGAT+TGG | 0.417907 | 4.1:-7837379 | MS.gene70170:CDS |
| TTCCATAGCAGGAAACTTCC+TGG | 0.422960 | 4.1:-7837528 | MS.gene70170:CDS |
| ACTCCATCCAGCACAGATAT+AGG | 0.427034 | 4.1:+7840765 | None:intergenic |
| CCATCAACACCAAGTGCAAC+AGG | 0.433459 | 4.1:+7840229 | None:intergenic |
| CTAGCACATTATTCAACAAT+TGG | 0.435609 | 4.1:-7838507 | MS.gene70170:CDS |
| GCGGTATAAATCCACATTAT+GGG | 0.435704 | 4.1:-7840465 | MS.gene70170:intron |
| GAAATTTAGCAGACTTTGGA+TGG | 0.438159 | 4.1:-7838360 | MS.gene70170:CDS |
| CCACTTGGCATTTGCAATGC+AGG | 0.439680 | 4.1:-7837314 | MS.gene70170:CDS |
| ATGGCAAGTTGAACTTTGTC+TGG | 0.440183 | 4.1:+7841539 | None:intergenic |
| TCAGTGCATCATCTTGAATT+GGG | 0.443180 | 4.1:+7837718 | None:intergenic |
| TCAGTTTATAGGAAGGCCTT+GGG | 0.451477 | 4.1:-7837353 | MS.gene70170:CDS |
| GATCTTACAGGTATACTAGA+AGG | 0.455330 | 4.1:+7839434 | None:intergenic |
| AGTTGTAGGTAAGCAATCTA+TGG | 0.460678 | 4.1:+7841520 | None:intergenic |
| AGGGTAGCCCTTAAAATCTA+TGG | 0.467139 | 4.1:-7838331 | MS.gene70170:CDS |
| CTTATTCGGTATTCCATAGC+AGG | 0.473020 | 4.1:-7837539 | MS.gene70170:CDS |
| AAGAATCCCATTTGAAGTGT+AGG | 0.478977 | 4.1:+7841128 | None:intergenic |
| GGATTATGAACCTTTAACAT+TGG | 0.480761 | 4.1:+7842482 | None:intergenic |
| CAGCAGTGGAAGATTAATCT+TGG | 0.482282 | 4.1:+7839247 | None:intergenic |
| ATGAACCTTTAACATTGGCT+TGG | 0.484550 | 4.1:+7842487 | None:intergenic |
| GTGGAGTCAAAGCCAAATCC+AGG | 0.484798 | 4.1:+7841561 | None:intergenic |
| TGGAGTTCCTGTTGCTATCA+AGG | 0.485233 | 4.1:-7840748 | MS.gene70170:CDS |
| ATTAAACGTTTAAGATTATG+TGG | 0.487939 | 4.1:-7840538 | MS.gene70170:CDS |
| TCCCAGGAAGTTTCCTGCTA+TGG | 0.489592 | 4.1:+7837526 | None:intergenic |
| CTGGAGCTTGTTCAGAGCAC+TGG | 0.490184 | 4.1:+7839016 | None:intergenic |
| TATAGGAAGGCCTTGGGCTG+AGG | 0.494779 | 4.1:-7837347 | MS.gene70170:CDS |
| TATTTCAGAGCTTACAGCTC+AGG | 0.500226 | 4.1:-7841440 | MS.gene70170:CDS |
| CCTATAAACTGAAGACCAAT+CGG | 0.500567 | 4.1:+7837364 | None:intergenic |
| TATGTGGTGCTGTACTTGTC+GGG | 0.503038 | 4.1:-7840522 | MS.gene70170:CDS |
| TCAGTCGTATACCTCATTCT+GGG | 0.509077 | 4.1:-7839745 | MS.gene70170:intron |
| GGGTTGTGTCCTGTTGCACT+TGG | 0.511449 | 4.1:-7840238 | MS.gene70170:CDS |
| TATATAGCTCCACGCATGAC+TGG | 0.511816 | 4.1:-7842131 | MS.gene70170:intron |
| ATGGTCCACCGATTAAATGA+AGG | 0.512833 | 4.1:+7841470 | None:intergenic |
| AGCTCCAGGGTCATTATGGT+TGG | 0.515079 | 4.1:-7839001 | MS.gene70170:CDS |
| TCTAAACTGGACAGTTGGTA+TGG | 0.515763 | 4.1:-7839620 | MS.gene70170:CDS |
| AGAACCTCCTGCAATCCTAC+TGG | 0.516769 | 4.1:+7840291 | None:intergenic |
| CCTGTGAAGGATGTCAATTT+AGG | 0.517477 | 4.1:-7842534 | MS.gene70170:CDS |
| CAGTGACAGCAGGAAGTCCC+AGG | 0.517637 | 4.1:+7837510 | None:intergenic |
| AACTGGACAGTTGGTATGGT+GGG | 0.517644 | 4.1:-7839616 | MS.gene70170:CDS |
| TTTCTATTGTATATATTGAA+GGG | 0.519697 | 4.1:-7842056 | MS.gene70170:CDS |
| CAAGATGATGCACTGAAGAC+TGG | 0.521085 | 4.1:-7837711 | MS.gene70170:CDS |
| TGTTTGCCATATCCTACTAC+AGG | 0.522224 | 4.1:-7840714 | MS.gene70170:intron |
| TCAAAACCTACACTTCAAAT+GGG | 0.524434 | 4.1:-7841134 | MS.gene70170:CDS |
| AGGAGAACCTATATCTGTGC+TGG | 0.524895 | 4.1:-7840772 | MS.gene70170:CDS |
| AAGCAAATGAATCAACTCTT+CGG | 0.527469 | 4.1:-7841073 | MS.gene70170:CDS |
| ATGATTTCTTACCCATAATG+TGG | 0.527681 | 4.1:+7840454 | None:intergenic |
| AGGATGCCTGCAGCACTTTG+TGG | 0.528920 | 4.1:-7839791 | MS.gene70170:CDS |
| TGGATCTGCCGCTGTGGTGT+CGG | 0.530561 | 4.1:-7840263 | MS.gene70170:CDS |
| TGATGTAAGGGAACATAAAG+AGG | 0.534602 | 4.1:+7841782 | None:intergenic |
| CAGACTTTGGATGGGATGCA+AGG | 0.535614 | 4.1:-7838351 | MS.gene70170:CDS |
| TCTTGGTCAAGATTGTCGCT+TGG | 0.536132 | 4.1:-7842106 | MS.gene70170:CDS |
| GCAATCCTACTGGCATTATG+TGG | 0.537383 | 4.1:+7840301 | None:intergenic |
| GACTTTGTTAAGGGCAGCAG+TGG | 0.539380 | 4.1:+7839233 | None:intergenic |
| GGTGAACTTGACTATGTCAA+TGG | 0.540783 | 4.1:-7837690 | MS.gene70170:CDS |
| AAGACTAATATGCATGAACT+TGG | 0.543227 | 4.1:-7840499 | MS.gene70170:CDS |
| TTATGTGGTGCTGTACTTGT+CGG | 0.544034 | 4.1:-7840523 | MS.gene70170:CDS |
| AAACCTTCAAAATGATGTAA+GGG | 0.547435 | 4.1:+7841770 | None:intergenic |
| AATATGCATGAACTTGGAGC+TGG | 0.549159 | 4.1:-7840493 | MS.gene70170:CDS |
| CAACAAGCATCATCTGTACA+AGG | 0.558005 | 4.1:+7840562 | None:intergenic |
| ATCAATGTTGCCTCAGCCCA+AGG | 0.559021 | 4.1:+7837337 | None:intergenic |
| CCTAAATTGACATCCTTCAC+AGG | 0.563018 | 4.1:+7842534 | None:intergenic |
| ATACTAGAAGGCTGATGCGA+TGG | 0.563779 | 4.1:+7839446 | None:intergenic |
| TCCATAGCAGGAAACTTCCT+GGG | 0.565982 | 4.1:-7837527 | MS.gene70170:CDS |
| CACCTTGCACTACCTGTAGT+AGG | 0.566644 | 4.1:+7840702 | None:intergenic |
| GTTGCACTTGGTGTTGATGG+GGG | 0.568029 | 4.1:-7840226 | MS.gene70170:CDS |
| CAAAGTGGCTGCACAAGCAA+AGG | 0.570336 | 4.1:-7840585 | MS.gene70170:CDS |
| CTGCCGCTGTGGTGTCGGCA+GGG | 0.571889 | 4.1:-7840258 | MS.gene70170:CDS |
| AAATTTAGCAGACTTTGGAT+GGG | 0.572870 | 4.1:-7838359 | MS.gene70170:CDS |
| ACTACACCACAAAGTGCTGC+AGG | 0.573330 | 4.1:+7839785 | None:intergenic |
| ATTCCTCTAAACTGGACAGT+TGG | 0.574544 | 4.1:-7839625 | MS.gene70170:CDS |
| TTGGTCTTCAGTTTATAGGA+AGG | 0.574624 | 4.1:-7837360 | MS.gene70170:CDS |
| GATAGAATTCAGTACTATCA+GGG | 0.575416 | 4.1:+7842511 | None:intergenic |
| TGTTGCACTTGGTGTTGATG+GGG | 0.576857 | 4.1:-7840227 | MS.gene70170:CDS |
| TCAACTCTTCGGTATCAGAA+AGG | 0.581140 | 4.1:-7841062 | MS.gene70170:intron |
| ATTGAATCTCACCCAGAATG+AGG | 0.581363 | 4.1:+7839734 | None:intergenic |
| GAACCTATATCTGTGCTGGA+TGG | 0.582594 | 4.1:-7840768 | MS.gene70170:CDS |
| TGAGGCAACATTGATCCACT+TGG | 0.585413 | 4.1:-7837329 | MS.gene70170:CDS |
| AGACTTTGGATGGGATGCAA+GGG | 0.586360 | 4.1:-7838350 | MS.gene70170:CDS |
| CAATTGTTGAATAATGTGCT+AGG | 0.588010 | 4.1:+7838508 | None:intergenic |
| CCAGGGTCATTATGGTTGGA+AGG | 0.592244 | 4.1:-7838997 | MS.gene70170:intron |
| AATGGGACAAACCCTGTTGT+TGG | 0.592859 | 4.1:+7837834 | None:intergenic |
| ATTGCAGGAGGTTCTTCTAG+TGG | 0.594246 | 4.1:-7840283 | MS.gene70170:CDS |
| CAAAGCCTTCATTTAATCGG+TGG | 0.595737 | 4.1:-7841475 | MS.gene70170:CDS |
| GGTATGGTGGGAATACTAGC+AGG | 0.598355 | 4.1:-7839604 | MS.gene70170:CDS |
| TACAGTTATGCAGCAATCAG+CGG | 0.598468 | 4.1:-7839476 | MS.gene70170:intron |
| ACCAAGATTCCAGTCATGCG+TGG | 0.606578 | 4.1:+7842122 | None:intergenic |
| TTTGTTCAAAAGCAAACGTG+TGG | 0.608636 | 4.1:-7842565 | MS.gene70170:CDS |
| AAACTGGACAGTTGGTATGG+TGG | 0.613551 | 4.1:-7839617 | MS.gene70170:CDS |
| GCAAGTTGAACTTTGTCTGG+TGG | 0.616644 | 4.1:+7841542 | None:intergenic |
| TTCTAGTGGATCTGCCGCTG+TGG | 0.617673 | 4.1:-7840269 | MS.gene70170:CDS |
| CTATGGTGCATTCAGCAGCA+TGG | 0.618932 | 4.1:-7838314 | MS.gene70170:CDS |
| CCTGCATTGCAAATGCCAAG+TGG | 0.621300 | 4.1:+7837314 | None:intergenic |
| TGACACAATGACATCAGCCT+CGG | 0.628316 | 4.1:+7837857 | None:intergenic |
| AATACTAGCAGGCACTGTTG+AGG | 0.630155 | 4.1:-7839593 | MS.gene70170:CDS |
| TATACCGGAACAGTGACAGC+AGG | 0.630886 | 4.1:+7837500 | None:intergenic |
| AGTGCTCTGAACAAGCTCCA+GGG | 0.632077 | 4.1:-7839014 | MS.gene70170:CDS |
| GAACTTGGAGCTGGAACTAG+CGG | 0.632636 | 4.1:-7840484 | MS.gene70170:CDS |
| CCTTCCAACCATAATGACCC+TGG | 0.634205 | 4.1:+7838997 | None:intergenic |
| CAAGTTGGCAAAGTATGGCA+AGG | 0.636701 | 4.1:-7839198 | MS.gene70170:intron |
| GAAATCCACATAATGCCAGT+AGG | 0.637654 | 4.1:-7840306 | MS.gene70170:CDS |
| ATCCTCTAGGTGGTACAAAG+TGG | 0.640973 | 4.1:-7840600 | MS.gene70170:intron |
| TGAAATAGTAATACCATGTG+TGG | 0.663567 | 4.1:+7841407 | None:intergenic |
| TGTAAGGGAACATAAAGAGG+TGG | 0.667436 | 4.1:+7841785 | None:intergenic |
| AGGAGATATAACACCACACA+TGG | 0.672196 | 4.1:-7841420 | MS.gene70170:intron |
| TCATTGTGTCACCAACAACA+GGG | 0.674990 | 4.1:-7837845 | MS.gene70170:intron |
| TGTGGTTTACGAGCCTGTGA+AGG | 0.675715 | 4.1:-7842547 | MS.gene70170:CDS |
| TGGAGTCAAAGCCAAATCCA+GGG | 0.676439 | 4.1:+7841562 | None:intergenic |
| ATGCCTATCCAGGCTCTGTG+AGG | 0.678886 | 4.1:-7839811 | MS.gene70170:intron |
| TGAGGTATACGACTGAAAGT+CGG | 0.686779 | 4.1:+7839752 | None:intergenic |
| CAACCCTGCCGACACCACAG+CGG | 0.709893 | 4.1:+7840255 | None:intergenic |
| AATGCCAGTAGGATTGCAGG+AGG | 0.720435 | 4.1:-7840295 | MS.gene70170:CDS |
| GAACTTGACTATGTCAATGG+AGG | 0.732860 | 4.1:-7837687 | MS.gene70170:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTATAAAATATAATGAA+TGG | + | chr4.1:7839721-7839740 | None:intergenic | 10.0% |
| !! | GTAATAAATAATAAAAACAA+TGG | + | chr4.1:7837415-7837434 | None:intergenic | 10.0% |
| !! | TAAAAAAATGATTACAATTA+AGG | + | chr4.1:7842432-7842451 | None:intergenic | 10.0% |
| !! | TTGTTTATTCATATATATAT+TGG | - | chr4.1:7840736-7840755 | MS.gene70170:CDS | 10.0% |
| !! | AAAATAATGAATAAACTCAA+GGG | + | chr4.1:7841446-7841465 | None:intergenic | 15.0% |
| !! | AGAGATTAAAAAACATAAAT+TGG | - | chr4.1:7841872-7841891 | MS.gene70170:intron | 15.0% |
| !! | ATGATATTTGAATAATTTAG+TGG | - | chr4.1:7838237-7838256 | MS.gene70170:intron | 15.0% |
| !! | ATTTATATTTGTAGATGAAA+AGG | - | chr4.1:7839679-7839698 | MS.gene70170:intron | 15.0% |
| !! | TAAAATTTACTTACAATCAA+TGG | + | chr4.1:7837679-7837698 | None:intergenic | 15.0% |
| !! | TTTCTATTGTATATATTGAA+GGG | - | chr4.1:7837817-7837836 | MS.gene70170:intron | 15.0% |
| !!! | GTTTTTTTTGAAAAAGTTAA+TGG | + | chr4.1:7838549-7838568 | None:intergenic | 15.0% |
| !!! | TAACTTTTTCAAAAAAAACT+TGG | - | chr4.1:7838550-7838569 | MS.gene70170:intron | 15.0% |
| !!! | TATTTTTAAACTGTAAGAAA+TGG | + | chr4.1:7837437-7837456 | None:intergenic | 15.0% |
| !!! | TTGTAATGATTTTAGAATAA+TGG | - | chr4.1:7840204-7840223 | MS.gene70170:intron | 15.0% |
| !!! | TTTTCTATTGTATATATTGA+AGG | - | chr4.1:7837816-7837835 | MS.gene70170:intron | 15.0% |
| !! | AGAATTAACACAAAAATGAT+AGG | + | chr4.1:7838523-7838542 | None:intergenic | 20.0% |
| !! | ATATTGTAGACTTAAATTTC+AGG | + | chr4.1:7839998-7840017 | None:intergenic | 20.0% |
| !! | ATTGCTACATCTTAAAATAT+AGG | + | chr4.1:7842085-7842104 | None:intergenic | 20.0% |
| !! | GAAAATAATGAATAAACTCA+AGG | + | chr4.1:7841447-7841466 | None:intergenic | 20.0% |
| !! | TACAAAATGTATAAAGTGAA+AGG | - | chr4.1:7841794-7841813 | MS.gene70170:CDS | 20.0% |
| !! | TATGCATTGAATATATTGAT+TGG | - | chr4.1:7840713-7840732 | MS.gene70170:intron | 20.0% |
| !! | TCAAATTTCAAATACATAAC+TGG | + | chr4.1:7839204-7839223 | None:intergenic | 20.0% |
| !! | TGTTTATAAAGTCATACATA+TGG | + | chr4.1:7839822-7839841 | None:intergenic | 20.0% |
| !! | TTAATTAATCATGTGACTTT+AGG | - | chr4.1:7841898-7841917 | MS.gene70170:intron | 20.0% |
| !! | TTGTGTATTTAAACCAAAAT+TGG | + | chr4.1:7841306-7841325 | None:intergenic | 20.0% |
| !!! | AAACATTTTTAATGATATGG+CGG | - | chr4.1:7839857-7839876 | MS.gene70170:intron | 20.0% |
| !!! | AATCATTTTTTTAGAGAACT+CGG | - | chr4.1:7842439-7842458 | MS.gene70170:intron | 20.0% |
| !!! | ATATTTTTACAACAACTTTG+TGG | - | chr4.1:7837953-7837972 | MS.gene70170:intron | 20.0% |
| !!! | ATTAAACGTTTAAGATTATG+TGG | - | chr4.1:7839335-7839354 | MS.gene70170:intron | 20.0% |
| !!! | ATTTAACTTCTTTTTCATTG+TGG | + | chr4.1:7838291-7838310 | None:intergenic | 20.0% |
| !!! | GTCAAACATTTTTAATGATA+TGG | - | chr4.1:7839854-7839873 | MS.gene70170:intron | 20.0% |
| !!! | TCGTAAATTCATTTTATCTT+CGG | - | chr4.1:7838641-7838660 | MS.gene70170:intron | 20.0% |
| !!! | TTATTCATTATTTTCCTCTT+GGG | - | chr4.1:7841452-7841471 | MS.gene70170:CDS | 20.0% |
| !!! | TTCATTAGTTTAAAGAGATA+AGG | + | chr4.1:7840583-7840602 | None:intergenic | 20.0% |
| !!! | TTTATTCATTATTTTCCTCT+TGG | - | chr4.1:7841451-7841470 | MS.gene70170:CDS | 20.0% |
| !!! | TTTGATATTGACTTTGTTAA+GGG | + | chr4.1:7840652-7840671 | None:intergenic | 20.0% |
| !!! | TTTTGATATTGACTTTGTTA+AGG | + | chr4.1:7840653-7840672 | None:intergenic | 20.0% |
| ! | AAAAACATTTGCTCAGAATT+TGG | + | chr4.1:7838029-7838048 | None:intergenic | 25.0% |
| ! | AAACCTTCAAAATGATGTAA+GGG | + | chr4.1:7838106-7838125 | None:intergenic | 25.0% |
| ! | AACACAAAAATGATAGGATT+AGG | + | chr4.1:7838517-7838536 | None:intergenic | 25.0% |
| ! | AATGAATCATATCATGATCA+TGG | + | chr4.1:7837717-7837736 | None:intergenic | 25.0% |
| ! | ACCAAATATGTTCATATCAT+AGG | - | chr4.1:7839970-7839989 | MS.gene70170:intron | 25.0% |
| ! | ACCTATGATATGAACATATT+TGG | + | chr4.1:7839974-7839993 | None:intergenic | 25.0% |
| ! | ACTGCAAAATATTGTGAATA+TGG | - | chr4.1:7838151-7838170 | MS.gene70170:intron | 25.0% |
| ! | ACTTTACAAAGACCAATTAA+TGG | - | chr4.1:7838373-7838392 | MS.gene70170:intron | 25.0% |
| ! | ATAAAACATATAACCATGAG+TGG | + | chr4.1:7841953-7841972 | None:intergenic | 25.0% |
| ! | ATATGAAAAGTTTGATTGCA+AGG | + | chr4.1:7837935-7837954 | None:intergenic | 25.0% |
| ! | ATATTTCATATGTTGATGTG+TGG | - | chr4.1:7839018-7839037 | MS.gene70170:CDS | 25.0% |
| ! | ATTATCAACTGAAAGATCTA+TGG | + | chr4.1:7838894-7838913 | None:intergenic | 25.0% |
| ! | CATGTTAAGTTTGAGAAAAT+GGG | + | chr4.1:7842059-7842078 | None:intergenic | 25.0% |
| ! | CTTCAAGTAAACTTTAACAT+TGG | - | chr4.1:7840347-7840366 | MS.gene70170:intron | 25.0% |
| ! | GGGAAATAATCTTATTCATA+AGG | - | chr4.1:7837837-7837856 | MS.gene70170:intron | 25.0% |
| ! | GTATATAGATTCAGTTTAAC+TGG | - | chr4.1:7842208-7842227 | MS.gene70170:intron | 25.0% |
| ! | GTCAATATCAAAAATCAAGT+TGG | - | chr4.1:7840660-7840679 | MS.gene70170:intron | 25.0% |
| ! | TAAATGACATAACTGAAGTT+AGG | + | chr4.1:7840776-7840795 | None:intergenic | 25.0% |
| ! | TAGGTATAGAATAGAGTAAA+GGG | + | chr4.1:7841764-7841783 | None:intergenic | 25.0% |
| ! | TATAAAGTCATACATATGGT+TGG | + | chr4.1:7839818-7839837 | None:intergenic | 25.0% |
| ! | TCATGTTAAGTTTGAGAAAA+TGG | + | chr4.1:7842060-7842079 | None:intergenic | 25.0% |
| ! | TTAGGTATAGAATAGAGTAA+AGG | + | chr4.1:7841765-7841784 | None:intergenic | 25.0% |
| !! | ACTTTAAGAGACTAATCATA+TGG | - | chr4.1:7837976-7837995 | MS.gene70170:intron | 25.0% |
| !! | AGTTTCAGTATTGAATATGT+TGG | - | chr4.1:7837569-7837588 | MS.gene70170:intron | 25.0% |
| !! | ATTAGTTTAAAGAGATAAGG+AGG | + | chr4.1:7840580-7840599 | None:intergenic | 25.0% |
| !! | CATAAATTTTCTGAATTCCT+TGG | + | chr4.1:7841656-7841675 | None:intergenic | 25.0% |
| !! | GTTATATGTTTTATGAACAC+AGG | - | chr4.1:7841959-7841978 | MS.gene70170:intron | 25.0% |
| !! | TATTCATTATTTTCCTCTTG+GGG | - | chr4.1:7841453-7841472 | MS.gene70170:CDS | 25.0% |
| !!! | ATGGATATTATTTTTCTTGC+AGG | - | chr4.1:7838170-7838189 | MS.gene70170:intron | 25.0% |
| !!! | GTTTGTTATTTTCAACTAGT+AGG | - | chr4.1:7838122-7838141 | MS.gene70170:intron | 25.0% |
| AAACCTTAATAATCCACTCA+TGG | - | chr4.1:7841937-7841956 | MS.gene70170:intron | 30.0% | |
| AAATTTAGCAGACTTTGGAT+GGG | - | chr4.1:7841514-7841533 | MS.gene70170:CDS | 30.0% | |
| AAGACTAATATGCATGAACT+TGG | - | chr4.1:7839374-7839393 | MS.gene70170:intron | 30.0% | |
| AAGCAAATGAATCAACTCTT+CGG | - | chr4.1:7838800-7838819 | MS.gene70170:intron | 30.0% | |
| AAGCTATCATGAAGAACTTA+TGG | + | chr4.1:7841070-7841089 | None:intergenic | 30.0% | |
| AAGTTGAATACAACATCTTC+TGG | + | chr4.1:7838981-7839000 | None:intergenic | 30.0% | |
| AATAAGCTGAAAACAGCTTA+CGG | + | chr4.1:7841046-7841065 | None:intergenic | 30.0% | |
| AATAAGTGCAGCTGAATTAA+TGG | + | chr4.1:7842320-7842339 | None:intergenic | 30.0% | |
| AATCAGTTGTCAAAATCACT+TGG | + | chr4.1:7840481-7840500 | None:intergenic | 30.0% | |
| ACTGTCAAAGAAGAATATAC+CGG | + | chr4.1:7842391-7842410 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCTAC+TGG | - | chr4.1:7840965-7840984 | MS.gene70170:intron | 30.0% | |
| AGATAGAATTCAGTACTATC+AGG | + | chr4.1:7837366-7837385 | None:intergenic | 30.0% | |
| AGTATCTTTATAAGCAGCTT+AGG | + | chr4.1:7842269-7842288 | None:intergenic | 30.0% | |
| ATGATTTCTTACCCATAATG+TGG | + | chr4.1:7839422-7839441 | None:intergenic | 30.0% | |
| ATTCAACTGTTTAACCAAAC+AGG | - | chr4.1:7841175-7841194 | MS.gene70170:intron | 30.0% | |
| ATTTGCTCAGAATTTGGAAA+AGG | + | chr4.1:7838023-7838042 | None:intergenic | 30.0% | |
| CAAACCTTCAAAATGATGTA+AGG | + | chr4.1:7838107-7838126 | None:intergenic | 30.0% | |
| CAATTGTTGAATAATGTGCT+AGG | + | chr4.1:7841368-7841387 | None:intergenic | 30.0% | |
| CACTCTGCTTAGAAAATAAA+AGG | + | chr4.1:7839940-7839959 | None:intergenic | 30.0% | |
| CCACTAATTGATGAAATTAG+TGG | + | chr4.1:7840800-7840819 | None:intergenic | 30.0% | |
| CCACTAATTTCATCAATTAG+TGG | - | chr4.1:7840797-7840816 | MS.gene70170:intron | 30.0% | |
| CGAAACTTGTAATTGAAAAC+TGG | + | chr4.1:7837635-7837654 | None:intergenic | 30.0% | |
| CTAGCACATTATTCAACAAT+TGG | - | chr4.1:7841366-7841385 | MS.gene70170:intron | 30.0% | |
| CTTCGAACAATAAAACATCA+TGG | + | chr4.1:7838598-7838617 | None:intergenic | 30.0% | |
| GAACAAAGCCTTCATTTAAT+CGG | - | chr4.1:7838395-7838414 | MS.gene70170:intron | 30.0% | |
| GAAGAAAAAATAGCACAGAA+AGG | + | chr4.1:7840331-7840350 | None:intergenic | 30.0% | |
| GACTTGAAGAAAGAATATCT+AGG | + | chr4.1:7838495-7838514 | None:intergenic | 30.0% | |
| GATAGAATTCAGTACTATCA+GGG | + | chr4.1:7837365-7837384 | None:intergenic | 30.0% | |
| GGATTATGAACCTTTAACAT+TGG | + | chr4.1:7837394-7837413 | None:intergenic | 30.0% | |
| GGCATATGCAAAGAAAATAT+TGG | + | chr4.1:7840047-7840066 | None:intergenic | 30.0% | |
| GTATTTAAACCAAAATTGGC+AGG | + | chr4.1:7841302-7841321 | None:intergenic | 30.0% | |
| GTCACACTGTAATATGTATT+AGG | + | chr4.1:7842129-7842148 | None:intergenic | 30.0% | |
| TAAGCTGCTTATAAAGATAC+TGG | - | chr4.1:7842268-7842287 | MS.gene70170:intron | 30.0% | |
| TAATCACTTCACTCAATGAA+TGG | + | chr4.1:7841271-7841290 | None:intergenic | 30.0% | |
| TCAAAACCTACACTTCAAAT+GGG | - | chr4.1:7838739-7838758 | MS.gene70170:intron | 30.0% | |
| TCATTAATATATAGCTGAGC+AGG | + | chr4.1:7839484-7839503 | None:intergenic | 30.0% | |
| TGAAAAAGAAGTTAAATCCC+TGG | - | chr4.1:7838294-7838313 | MS.gene70170:CDS | 30.0% | |
| TGAAAAGAACAAGATCTTAC+AGG | + | chr4.1:7840454-7840473 | None:intergenic | 30.0% | |
| TGAAATAGTAATACCATGTG+TGG | + | chr4.1:7838469-7838488 | None:intergenic | 30.0% | |
| TGAAGAAATTTAGCAGACTT+TGG | - | chr4.1:7841509-7841528 | MS.gene70170:CDS | 30.0% | |
| TGATGTGAAAAATTAGACCA+AGG | - | chr4.1:7841636-7841655 | MS.gene70170:intron | 30.0% | |
| TTAATTCAGCTGCACTTATT+CGG | - | chr4.1:7842320-7842339 | MS.gene70170:intron | 30.0% | |
| TTGAAGAAAGAATATCTAGG+AGG | + | chr4.1:7838492-7838511 | None:intergenic | 30.0% | |
| ! | CAGGTTTAAAATTGTCTAGT+AGG | + | chr4.1:7841734-7841753 | None:intergenic | 30.0% |
| ! | CATTTTGTATGTGTGTGTTT+AGG | + | chr4.1:7841783-7841802 | None:intergenic | 30.0% |
| ! | CTTGAGTTCTGATACTAATT+TGG | - | chr4.1:7839062-7839081 | MS.gene70170:intron | 30.0% |
| ! | GAATGCACCATAGATTTTAA+GGG | + | chr4.1:7841552-7841571 | None:intergenic | 30.0% |
| ! | GTCATGCTGATATATACTTT+TGG | - | chr4.1:7840170-7840189 | MS.gene70170:intron | 30.0% |
| ! | TCACAAGAAAATATTTTCCG+AGG | - | chr4.1:7841999-7842018 | MS.gene70170:intron | 30.0% |
| ! | TGAATGCACCATAGATTTTA+AGG | + | chr4.1:7841553-7841572 | None:intergenic | 30.0% |
| ! | TTTTCTTGTGAAACTGCAAT+TGG | + | chr4.1:7841990-7842009 | None:intergenic | 30.0% |
| !! | AAAATCAAGTTGGCAAAGTA+TGG | - | chr4.1:7840670-7840689 | MS.gene70170:intron | 30.0% |
| !! | AATGTTTTGAGCAATACCTT+AGG | - | chr4.1:7840603-7840622 | MS.gene70170:intron | 30.0% |
| !! | AGATGTAGCAATCTTTTTCA+TGG | - | chr4.1:7842093-7842112 | MS.gene70170:CDS | 30.0% |
| !! | ATTGGTCTTTGTAAAGTTGT+AGG | + | chr4.1:7838370-7838389 | None:intergenic | 30.0% |
| !! | GATGTAGCAATCTTTTTCAT+GGG | - | chr4.1:7842094-7842113 | MS.gene70170:CDS | 30.0% |
| !! | TAACCATGAGTGGATTATTA+AGG | + | chr4.1:7841943-7841962 | None:intergenic | 30.0% |
| AGAAGTTAAATCCCTGGATT+TGG | - | chr4.1:7838300-7838319 | MS.gene70170:CDS | 35.0% | |
| AGCGGTATAAATCCACATTA+TGG | - | chr4.1:7839407-7839426 | MS.gene70170:intron | 35.0% | |
| AGTAATTATAACTCCCCAAG+AGG | + | chr4.1:7841469-7841488 | None:intergenic | 35.0% | |
| AGTCTGCTAAATTTCTTCAG+TGG | + | chr4.1:7841508-7841527 | None:intergenic | 35.0% | |
| AGTTGTAGGTAAGCAATCTA+TGG | + | chr4.1:7838356-7838375 | None:intergenic | 35.0% | |
| AGTTTAAAGAGATAAGGAGG+AGG | + | chr4.1:7840577-7840596 | None:intergenic | 35.0% | |
| ATTTAATCGGTGGACCATAA+TGG | - | chr4.1:7838408-7838427 | MS.gene70170:intron | 35.0% | |
| CCTATAAACTGAAGACCAAT+CGG | + | chr4.1:7842512-7842531 | None:intergenic | 35.0% | |
| CTCAAAACCTACACTTCAAA+TGG | - | chr4.1:7838738-7838757 | MS.gene70170:intron | 35.0% | |
| CTGTTTATTTACACTCCACA+GGG | - | chr4.1:7839538-7839557 | MS.gene70170:intron | 35.0% | |
| GAAATTTAGCAGACTTTGGA+TGG | - | chr4.1:7841513-7841532 | MS.gene70170:CDS | 35.0% | |
| GAATTCTTCTTCGTTTGAAC+AGG | - | chr4.1:7838681-7838700 | MS.gene70170:intron | 35.0% | |
| GATAAATTGGGTTTACCGAT+TGG | - | chr4.1:7842494-7842513 | MS.gene70170:CDS | 35.0% | |
| GATCTTACAGGTATACTAGA+AGG | + | chr4.1:7840442-7840461 | None:intergenic | 35.0% | |
| GCGGTATAAATCCACATTAT+GGG | - | chr4.1:7839408-7839427 | MS.gene70170:intron | 35.0% | |
| GGGTACTCTCACTATAAATA+TGG | + | chr4.1:7842242-7842261 | None:intergenic | 35.0% | |
| GTCTTTAAATGGTATCCTCT+AGG | - | chr4.1:7839260-7839279 | MS.gene70170:intron | 35.0% | |
| TAATCACATGTGAGACTGTT+CGG | - | chr4.1:7840990-7841009 | MS.gene70170:intron | 35.0% | |
| TAGTATCAGAACTCAAGAGA+GGG | + | chr4.1:7839059-7839078 | None:intergenic | 35.0% | |
| TATCTCCAAGCCAATGTTAA+AGG | - | chr4.1:7837381-7837400 | MS.gene70170:CDS | 35.0% | |
| TCAGAGTTATTCCTCTAAAC+TGG | - | chr4.1:7840240-7840259 | MS.gene70170:CDS | 35.0% | |
| TCAGTGCATCATCTTGAATT+GGG | + | chr4.1:7842158-7842177 | None:intergenic | 35.0% | |
| TCTATCATCCTTTATCACAC+AGG | - | chr4.1:7842463-7842482 | MS.gene70170:intron | 35.0% | |
| TGATGTAAGGGAACATAAAG+AGG | + | chr4.1:7838094-7838113 | None:intergenic | 35.0% | |
| TTAGTATCAGAACTCAAGAG+AGG | + | chr4.1:7839060-7839079 | None:intergenic | 35.0% | |
| TTATAAGCAGCTTAGGCTTA+GGG | + | chr4.1:7842262-7842281 | None:intergenic | 35.0% | |
| TTCAGTGCATCATCTTGAAT+TGG | + | chr4.1:7842159-7842178 | None:intergenic | 35.0% | |
| TTGAGTATGACATGAAAGCA+TGG | - | chr4.1:7837462-7837481 | MS.gene70170:intron | 35.0% | |
| TTTAAATGGTATCCTCTAGG+TGG | - | chr4.1:7839263-7839282 | MS.gene70170:intron | 35.0% | |
| TTTATAAGCAGCTTAGGCTT+AGG | + | chr4.1:7842263-7842282 | None:intergenic | 35.0% | |
| TTTGTTCAAAAGCAAACGTG+TGG | - | chr4.1:7837308-7837327 | MS.gene70170:CDS | 35.0% | |
| ! | AAGAATCCCATTTGAAGTGT+AGG | + | chr4.1:7838748-7838767 | None:intergenic | 35.0% |
| ! | ACAGGTTGGCTATGATAAAT+TGG | - | chr4.1:7842481-7842500 | MS.gene70170:intron | 35.0% |
| ! | ACTTACTAACCTGCCAATTT+TGG | - | chr4.1:7841290-7841309 | MS.gene70170:intron | 35.0% |
| ! | ATGAACCTTTAACATTGGCT+TGG | + | chr4.1:7837389-7837408 | None:intergenic | 35.0% |
| ! | ATGTCGTAAGCTATTTCCAT+AGG | + | chr4.1:7841021-7841040 | None:intergenic | 35.0% |
| ! | ATTTCATCCTTGATAGCAAC+AGG | + | chr4.1:7839135-7839154 | None:intergenic | 35.0% |
| ! | CAGGTTGGCTATGATAAATT+GGG | - | chr4.1:7842482-7842501 | MS.gene70170:intron | 35.0% |
| ! | GTTCCCTTACATCATTTTGA+AGG | - | chr4.1:7838100-7838119 | MS.gene70170:intron | 35.0% |
| ! | TATGACATGAAAGCATGGTA+TGG | - | chr4.1:7837467-7837486 | MS.gene70170:intron | 35.0% |
| ! | TTGGTCTTCAGTTTATAGGA+AGG | - | chr4.1:7842513-7842532 | MS.gene70170:CDS | 35.0% |
| !! | AGCTCTGAAATAGTCCATTA+TGG | + | chr4.1:7838425-7838444 | None:intergenic | 35.0% |
| !! | CATTTGAAGTGTAGGTTTTG+AGG | + | chr4.1:7838740-7838759 | None:intergenic | 35.0% |
| !! | GAAGGCTTTGTTCCATTAAT+TGG | + | chr4.1:7838388-7838407 | None:intergenic | 35.0% |
| !! | TTGACTTGCACGTCTTTAAA+TGG | - | chr4.1:7839249-7839268 | MS.gene70170:CDS | 35.0% |
| !!! | TTGGTGCATGTTGTTTTTGT+AGG | - | chr4.1:7839081-7839100 | MS.gene70170:intron | 35.0% |
| AATATGCATGAACTTGGAGC+TGG | - | chr4.1:7839380-7839399 | MS.gene70170:intron | 40.0% | |
| AGGAGATATAACACCACACA+TGG | - | chr4.1:7838453-7838472 | MS.gene70170:intron | 40.0% | |
| AGGGTAGCCCTTAAAATCTA+TGG | - | chr4.1:7841542-7841561 | MS.gene70170:CDS | 40.0% | |
| ATACCAACTGTCCAGTTTAG+AGG | + | chr4.1:7840254-7840273 | None:intergenic | 40.0% | |
| ATAGCCAACCTGTGTGATAA+AGG | + | chr4.1:7842474-7842493 | None:intergenic | 40.0% | |
| ATCAGCTGATGACAAGAGTT+TGG | - | chr4.1:7839515-7839534 | MS.gene70170:intron | 40.0% | |
| ATTCCTCTAAACTGGACAGT+TGG | - | chr4.1:7840248-7840267 | MS.gene70170:CDS | 40.0% | |
| ATTGAATCTCACCCAGAATG+AGG | + | chr4.1:7840142-7840161 | None:intergenic | 40.0% | |
| CAAAGCCTTCATTTAATCGG+TGG | - | chr4.1:7838398-7838417 | MS.gene70170:intron | 40.0% | |
| CAACAAGCATCATCTGTACA+AGG | + | chr4.1:7839314-7839333 | None:intergenic | 40.0% | |
| CAGCAGTGGAAGATTAATCT+TGG | + | chr4.1:7840629-7840648 | None:intergenic | 40.0% | |
| CCTAAATTGACATCCTTCAC+AGG | + | chr4.1:7837342-7837361 | None:intergenic | 40.0% | |
| CCTGTGAAGGATGTCAATTT+AGG | - | chr4.1:7837339-7837358 | MS.gene70170:CDS | 40.0% | |
| CTTATTCGGTATTCCATAGC+AGG | - | chr4.1:7842334-7842353 | MS.gene70170:intron | 40.0% | |
| GAAATCCACATAATGCCAGT+AGG | - | chr4.1:7839567-7839586 | MS.gene70170:intron | 40.0% | |
| GAACTTGACTATGTCAATGG+AGG | - | chr4.1:7842186-7842205 | MS.gene70170:intron | 40.0% | |
| GCTGTTTATTTACACTCCAC+AGG | - | chr4.1:7839537-7839556 | MS.gene70170:intron | 40.0% | |
| GGAAGATTAATCTTGGCCTA+AGG | + | chr4.1:7840622-7840641 | None:intergenic | 40.0% | |
| GGTGAACTTGACTATGTCAA+TGG | - | chr4.1:7842183-7842202 | MS.gene70170:intron | 40.0% | |
| TACAGTTATGCAGCAATCAG+CGG | - | chr4.1:7840397-7840416 | MS.gene70170:intron | 40.0% | |
| TATTTCAGAGCTTACAGCTC+AGG | - | chr4.1:7838433-7838452 | MS.gene70170:intron | 40.0% | |
| TCAACTCTTCGGTATCAGAA+AGG | - | chr4.1:7838811-7838830 | MS.gene70170:intron | 40.0% | |
| TCAGTCGTATACCTCATTCT+GGG | - | chr4.1:7840128-7840147 | MS.gene70170:intron | 40.0% | |
| TCAGTTTATAGGAAGGCCTT+GGG | - | chr4.1:7842520-7842539 | MS.gene70170:CDS | 40.0% | |
| TCATCCTTTATCACACAGGT+TGG | - | chr4.1:7842467-7842486 | MS.gene70170:intron | 40.0% | |
| TCATTGTGTCACCAACAACA+GGG | - | chr4.1:7842028-7842047 | MS.gene70170:intron | 40.0% | |
| TGAGGTATACGACTGAAAGT+CGG | + | chr4.1:7840124-7840143 | None:intergenic | 40.0% | |
| TGTAAGGGAACATAAAGAGG+TGG | + | chr4.1:7838091-7838110 | None:intergenic | 40.0% | |
| TGTTTGCCATATCCTACTAC+AGG | - | chr4.1:7839159-7839178 | MS.gene70170:intron | 40.0% | |
| TTCAGTCGTATACCTCATTC+TGG | - | chr4.1:7840127-7840146 | MS.gene70170:intron | 40.0% | |
| TTCAGTTTATAGGAAGGCCT+TGG | - | chr4.1:7842519-7842538 | MS.gene70170:CDS | 40.0% | |
| TTCTTTGCATATGCCTATCC+AGG | - | chr4.1:7840052-7840071 | MS.gene70170:intron | 40.0% | |
| ! | ATGGCAAGTTGAACTTTGTC+TGG | + | chr4.1:7838337-7838356 | None:intergenic | 40.0% |
| ! | ATGGTCCACCGATTAAATGA+AGG | + | chr4.1:7838406-7838425 | None:intergenic | 40.0% |
| ! | GTCTAGTAGTCTTACCTGTT+TGG | + | chr4.1:7841192-7841211 | None:intergenic | 40.0% |
| ! | TCTAAACTGGACAGTTGGTA+TGG | - | chr4.1:7840253-7840272 | MS.gene70170:CDS | 40.0% |
| !! | CCGATTGGTCTTCAGTTTAT+AGG | - | chr4.1:7842509-7842528 | MS.gene70170:CDS | 40.0% |
| !! | CTCTTGGAGTGTCGAATAAT+TGG | - | chr4.1:7837790-7837809 | MS.gene70170:intron | 40.0% |
| !! | GATCTATGGTTTTGCAAGAG+AGG | + | chr4.1:7838880-7838899 | None:intergenic | 40.0% |
| !! | TTATGTGGTGCTGTACTTGT+CGG | - | chr4.1:7839350-7839369 | MS.gene70170:intron | 40.0% |
| AACAAGCTCCAGGGTCATTA+TGG | - | chr4.1:7840868-7840887 | MS.gene70170:intron | 45.0% | |
| AATGGGACAAACCCTGTTGT+TGG | + | chr4.1:7842042-7842061 | None:intergenic | 45.0% | |
| ACTCCATCCAGCACAGATAT+AGG | + | chr4.1:7839111-7839130 | None:intergenic | 45.0% | |
| AGACTGTTCGGAAGAACCTA+TGG | - | chr4.1:7841002-7841021 | MS.gene70170:intron | 45.0% | |
| AGACTTTGGATGGGATGCAA+GGG | - | chr4.1:7841523-7841542 | MS.gene70170:CDS | 45.0% | |
| AGGAGAACCTATATCTGTGC+TGG | - | chr4.1:7839101-7839120 | MS.gene70170:intron | 45.0% | |
| AGGCGCATCACTTCTATTTC+TGG | + | chr4.1:7841348-7841367 | None:intergenic | 45.0% | |
| ATACTAGAAGGCTGATGCGA+TGG | + | chr4.1:7840430-7840449 | None:intergenic | 45.0% | |
| ATCCTACTACAGGTAGTGCA+AGG | - | chr4.1:7839169-7839188 | MS.gene70170:intron | 45.0% | |
| ATCCTCTAGGTGGTACAAAG+TGG | - | chr4.1:7839273-7839292 | MS.gene70170:intron | 45.0% | |
| ATTGCAGGAGGTTCTTCTAG+TGG | - | chr4.1:7839590-7839609 | MS.gene70170:CDS | 45.0% | |
| CAAGATGATGCACTGAAGAC+TGG | - | chr4.1:7842162-7842181 | MS.gene70170:intron | 45.0% | |
| CATAATGCCAGTAGGATTGC+AGG | - | chr4.1:7839575-7839594 | MS.gene70170:intron | 45.0% | |
| GAACCTATATCTGTGCTGGA+TGG | - | chr4.1:7839105-7839124 | MS.gene70170:intron | 45.0% | |
| GCAATCCTACTGGCATTATG+TGG | + | chr4.1:7839575-7839594 | None:intergenic | 45.0% | |
| GCACTACCTGTAGTAGGATA+TGG | + | chr4.1:7839168-7839187 | None:intergenic | 45.0% | |
| GTCATTGTGTCACCAACAAC+AGG | - | chr4.1:7842027-7842046 | MS.gene70170:intron | 45.0% | |
| TACTGAAACTCCTCTGCATC+TGG | + | chr4.1:7837559-7837578 | None:intergenic | 45.0% | |
| TATATAGCTCCACGCATGAC+TGG | - | chr4.1:7837742-7837761 | MS.gene70170:intron | 45.0% | |
| TCCATAGCAGGAAACTTCCT+GGG | - | chr4.1:7842346-7842365 | MS.gene70170:intron | 45.0% | |
| TCTTGGTCAAGATTGTCGCT+TGG | - | chr4.1:7837767-7837786 | MS.gene70170:intron | 45.0% | |
| TGACACAATGACATCAGCCT+CGG | + | chr4.1:7842019-7842038 | None:intergenic | 45.0% | |
| TGAGGCAACATTGATCCACT+TGG | - | chr4.1:7842544-7842563 | MS.gene70170:CDS | 45.0% | |
| TGGAGTCAAAGCCAAATCCA+GGG | + | chr4.1:7838314-7838333 | None:intergenic | 45.0% | |
| TGGAGTTCCTGTTGCTATCA+AGG | - | chr4.1:7839125-7839144 | MS.gene70170:intron | 45.0% | |
| TTCCATAGCAGGAAACTTCC+TGG | - | chr4.1:7842345-7842364 | MS.gene70170:intron | 45.0% | |
| ! | AAACTGGACAGTTGGTATGG+TGG | - | chr4.1:7840256-7840275 | MS.gene70170:CDS | 45.0% |
| ! | AACTGGACAGTTGGTATGGT+GGG | - | chr4.1:7840257-7840276 | MS.gene70170:CDS | 45.0% |
| ! | AATACTAGCAGGCACTGTTG+AGG | - | chr4.1:7840280-7840299 | MS.gene70170:CDS | 45.0% |
| ! | CAAGTTGGCAAAGTATGGCA+AGG | - | chr4.1:7840675-7840694 | MS.gene70170:intron | 45.0% |
| ! | GCAAGTTGAACTTTGTCTGG+TGG | + | chr4.1:7838334-7838353 | None:intergenic | 45.0% |
| ! | TAGAGTAAAGGGAAGAGTGC+AGG | + | chr4.1:7841753-7841772 | None:intergenic | 45.0% |
| !! | CTGTTGCACTTGGTGTTGAT+GGG | - | chr4.1:7839645-7839664 | MS.gene70170:intron | 45.0% |
| !! | TATGTGGTGCTGTACTTGTC+GGG | - | chr4.1:7839351-7839370 | MS.gene70170:intron | 45.0% |
| !! | TGTTGCACTTGGTGTTGATG+GGG | - | chr4.1:7839646-7839665 | MS.gene70170:intron | 45.0% |
| AATGCCAGTAGGATTGCAGG+AGG | - | chr4.1:7839578-7839597 | MS.gene70170:intron | 50.0% | |
| ACCAAGATTCCAGTCATGCG+TGG | + | chr4.1:7837754-7837773 | None:intergenic | 50.0% | |
| ACTTCCTGCTGTCACTGTTC+CGG | - | chr4.1:7842369-7842388 | MS.gene70170:intron | 50.0% | |
| AGAACCTCCTGCAATCCTAC+TGG | + | chr4.1:7839585-7839604 | None:intergenic | 50.0% | |
| AGCTCCAGGGTCATTATGGT+TGG | - | chr4.1:7840872-7840891 | MS.gene70170:intron | 50.0% | |
| ATCAATGTTGCCTCAGCCCA+AGG | + | chr4.1:7842539-7842558 | None:intergenic | 50.0% | |
| CAAAGTGGCTGCACAAGCAA+AGG | - | chr4.1:7839288-7839307 | MS.gene70170:intron | 50.0% | |
| CACCTTGCACTACCTGTAGT+AGG | + | chr4.1:7839174-7839193 | None:intergenic | 50.0% | |
| CAGACTTTGGATGGGATGCA+AGG | - | chr4.1:7841522-7841541 | MS.gene70170:CDS | 50.0% | |
| CCACTTGGCATTTGCAATGC+AGG | - | chr4.1:7842559-7842578 | MS.gene70170:CDS | 50.0% | |
| CCAGGGTCATTATGGTTGGA+AGG | - | chr4.1:7840876-7840895 | MS.gene70170:intron | 50.0% | |
| CCATCAACACCAAGTGCAAC+AGG | + | chr4.1:7839647-7839666 | None:intergenic | 50.0% | |
| CCTGCATTGCAAATGCCAAG+TGG | + | chr4.1:7842562-7842581 | None:intergenic | 50.0% | |
| CCTTCCAACCATAATGACCC+TGG | + | chr4.1:7840879-7840898 | None:intergenic | 50.0% | |
| CTATGGTGCATTCAGCAGCA+TGG | - | chr4.1:7841559-7841578 | MS.gene70170:CDS | 50.0% | |
| GAACTTGGAGCTGGAACTAG+CGG | - | chr4.1:7839389-7839408 | MS.gene70170:intron | 50.0% | |
| GACTTTGTTAAGGGCAGCAG+TGG | + | chr4.1:7840643-7840662 | None:intergenic | 50.0% | |
| GCAGCACTTTGTGGTGTAGT+TGG | - | chr4.1:7840091-7840110 | MS.gene70170:intron | 50.0% | |
| GTGGAGTCAAAGCCAAATCC+AGG | + | chr4.1:7838315-7838334 | None:intergenic | 50.0% | |
| GTGGATTTCTTGTAGCCCTG+TGG | + | chr4.1:7839556-7839575 | None:intergenic | 50.0% | |
| TATACCGGAACAGTGACAGC+AGG | + | chr4.1:7842376-7842395 | None:intergenic | 50.0% | |
| TCCACGCATGACTGGAATCT+TGG | - | chr4.1:7837750-7837769 | MS.gene70170:intron | 50.0% | |
| TCCCAGGAAGTTTCCTGCTA+TGG | + | chr4.1:7842350-7842369 | None:intergenic | 50.0% | |
| TGAAACTCCTCTGCATCTGG+CGG | + | chr4.1:7837556-7837575 | None:intergenic | 50.0% | |
| TGTGGTTTACGAGCCTGTGA+AGG | - | chr4.1:7837326-7837345 | MS.gene70170:CDS | 50.0% | |
| ! | AGCCACTTTGTACCACCTAG+AGG | + | chr4.1:7839278-7839297 | None:intergenic | 50.0% |
| ! | AGTGCTCTGAACAAGCTCCA+GGG | - | chr4.1:7840859-7840878 | MS.gene70170:intron | 50.0% |
| ! | CAAGATTGTCGCTTGGCTCT+TGG | - | chr4.1:7837774-7837793 | MS.gene70170:intron | 50.0% |
| ! | GGTATGGTGGGAATACTAGC+AGG | - | chr4.1:7840269-7840288 | MS.gene70170:CDS | 50.0% |
| !! | ACTACACCACAAAGTGCTGC+AGG | + | chr4.1:7840091-7840110 | None:intergenic | 50.0% |
| !! | CCTGTTGCACTTGGTGTTGA+TGG | - | chr4.1:7839644-7839663 | MS.gene70170:intron | 50.0% |
| !! | GTTGCACTTGGTGTTGATGG+GGG | - | chr4.1:7839647-7839666 | MS.gene70170:intron | 50.0% |
| AGGATGCCTGCAGCACTTTG+TGG | - | chr4.1:7840082-7840101 | MS.gene70170:intron | 55.0% | |
| ATGCCTATCCAGGCTCTGTG+AGG | - | chr4.1:7840062-7840081 | MS.gene70170:intron | 55.0% | |
| CATCCTCACAGAGCCTGGAT+AGG | + | chr4.1:7840068-7840087 | None:intergenic | 55.0% | |
| GGGTTGTGTCCTGTTGCACT+TGG | - | chr4.1:7839635-7839654 | MS.gene70170:intron | 55.0% | |
| TATAGGAAGGCCTTGGGCTG+AGG | - | chr4.1:7842526-7842545 | MS.gene70170:CDS | 55.0% | |
| TCTGTATCCGCCAGATGCAG+AGG | - | chr4.1:7837546-7837565 | MS.gene70170:CDS | 55.0% | |
| ! | CAGTGCTCTGAACAAGCTCC+AGG | - | chr4.1:7840858-7840877 | MS.gene70170:intron | 55.0% |
| ! | CTGGAGCTTGTTCAGAGCAC+TGG | + | chr4.1:7840860-7840879 | None:intergenic | 55.0% |
| ! | TTCTAGTGGATCTGCCGCTG+TGG | - | chr4.1:7839604-7839623 | MS.gene70170:CDS | 55.0% |
| CAGTGACAGCAGGAAGTCCC+AGG | + | chr4.1:7842366-7842385 | None:intergenic | 60.0% | |
| TGGATCTGCCGCTGTGGTGT+CGG | - | chr4.1:7839610-7839629 | MS.gene70170:CDS | 60.0% | |
| !! | GCACTTGGTGTTGATGGGGG+AGG | - | chr4.1:7839650-7839669 | MS.gene70170:intron | 60.0% |
| CAACCCTGCCGACACCACAG+CGG | + | chr4.1:7839621-7839640 | None:intergenic | 65.0% | |
| GCAGGCATCCTCACAGAGCC+TGG | + | chr4.1:7840073-7840092 | None:intergenic | 65.0% | |
| !! | CTGCCGCTGTGGTGTCGGCA+GGG | - | chr4.1:7839615-7839634 | MS.gene70170:CDS | 70.0% |
| !! | TCTGCCGCTGTGGTGTCGGC+AGG | - | chr4.1:7839614-7839633 | MS.gene70170:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 7837303 | 7842592 | 7837303 | ID=MS.gene70170 |
| chr4.1 | mRNA | 7837303 | 7842592 | 7837303 | ID=MS.gene70170.t1;Parent=MS.gene70170 |
| chr4.1 | exon | 7842493 | 7842592 | 7842493 | ID=MS.gene70170.t1.exon1;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7842493 | 7842592 | 7842493 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7842037 | 7842146 | 7842037 | ID=MS.gene70170.t1.exon2;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7842037 | 7842146 | 7842037 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7841774 | 7841834 | 7841774 | ID=MS.gene70170.t1.exon3;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7841774 | 7841834 | 7841774 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7841421 | 7841608 | 7841421 | ID=MS.gene70170.t1.exon4;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7841421 | 7841608 | 7841421 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7841063 | 7841192 | 7841063 | ID=MS.gene70170.t1.exon5;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7841063 | 7841192 | 7841063 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7840715 | 7840792 | 7840715 | ID=MS.gene70170.t1.exon6;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7840715 | 7840792 | 7840715 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7840466 | 7840613 | 7840466 | ID=MS.gene70170.t1.exon7;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7840466 | 7840613 | 7840466 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7840224 | 7840336 | 7840224 | ID=MS.gene70170.t1.exon8;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7840224 | 7840336 | 7840224 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7839746 | 7839821 | 7839746 | ID=MS.gene70170.t1.exon9;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7839746 | 7839821 | 7839746 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7839580 | 7839651 | 7839580 | ID=MS.gene70170.t1.exon10;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7839580 | 7839651 | 7839580 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7839442 | 7839493 | 7839442 | ID=MS.gene70170.t1.exon11;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7839442 | 7839493 | 7839442 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7839199 | 7839270 | 7839199 | ID=MS.gene70170.t1.exon12;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7839199 | 7839270 | 7839199 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7838998 | 7839078 | 7838998 | ID=MS.gene70170.t1.exon13;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7838998 | 7839078 | 7838998 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7838468 | 7838568 | 7838468 | ID=MS.gene70170.t1.exon14;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7838468 | 7838568 | 7838468 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7838289 | 7838381 | 7838289 | ID=MS.gene70170.t1.exon15;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7838289 | 7838381 | 7838289 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7837846 | 7837914 | 7837846 | ID=MS.gene70170.t1.exon16;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7837846 | 7837914 | 7837846 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7837688 | 7837752 | 7837688 | ID=MS.gene70170.t1.exon17;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7837688 | 7837752 | 7837688 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7837505 | 7837566 | 7837505 | ID=MS.gene70170.t1.exon18;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7837505 | 7837566 | 7837505 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| chr4.1 | exon | 7837303 | 7837410 | 7837303 | ID=MS.gene70170.t1.exon19;Parent=MS.gene70170.t1 |
| chr4.1 | CDS | 7837303 | 7837410 | 7837303 | ID=cds.MS.gene70170.t1;Parent=MS.gene70170.t1 |
| Gene Sequence |
| Protein sequence |
