AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71259

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71259.t1 MTR_0013s0150 97.143 385 6 3 1 384 1 381 0.0 748
MS.gene71259.t1 MTR_3g033620 75.177 282 68 1 102 383 111 390 7.19e-158 449
MS.gene71259.t1 MTR_4g077000 72.857 280 76 0 101 380 109 388 4.71e-153 437
MS.gene71259.t1 MTR_3g071970 37.288 295 168 6 98 380 427 716 2.71e-55 194
MS.gene71259.t1 MTR_2g084605 33.333 273 169 5 116 380 125 392 6.11e-39 143
MS.gene71259.t1 MTR_7g064130 31.119 286 180 7 105 380 170 448 6.17e-32 125
MS.gene71259.t1 MTR_7g074090 32.479 234 141 5 150 381 90 308 3.07e-29 115
MS.gene71259.t1 MTR_7g074090 32.618 233 140 5 150 380 90 307 1.20e-28 115
MS.gene71259.t1 MTR_7g074090 32.479 234 141 5 150 381 108 326 2.36e-28 114
MS.gene71259.t1 MTR_7g074070 32.645 242 145 5 142 380 92 318 3.85e-26 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71259.t1 AT5G12470 73.702 289 76 0 93 381 96 384 2.54e-161 458
MS.gene71259.t1 AT3G56140 40.000 295 160 6 98 380 200 489 4.76e-60 202
MS.gene71259.t1 AT2G40400 40.339 295 159 6 98 380 410 699 8.00e-60 206
MS.gene71259.t1 AT2G40400 40.339 295 159 6 98 380 410 699 8.00e-60 206
MS.gene71259.t1 AT3G56140 40.000 295 160 6 98 380 419 708 1.24e-58 203
MS.gene71259.t1 AT3G56140 40.000 295 160 6 98 380 419 708 1.24e-58 203
MS.gene71259.t1 AT2G40400 39.184 245 133 5 98 330 410 650 2.73e-44 162
MS.gene71259.t1 AT5G22790 32.542 295 173 8 103 380 148 433 1.17e-35 135
MS.gene71259.t1 AT2G37860 31.633 294 176 9 103 380 148 432 3.03e-33 129
MS.gene71259.t1 AT2G37860 31.633 294 176 9 103 380 148 432 3.03e-33 129
MS.gene71259.t1 AT3G08630 31.356 236 141 5 154 384 104 323 3.14e-28 113
MS.gene71259.t1 AT3G08640 30.043 233 148 4 154 384 107 326 7.96e-26 107
MS.gene71259.t1 AT2G37860 29.268 205 127 5 103 294 148 347 1.08e-18 86.7
MS.gene71259.t1 AT2G37860 29.268 205 127 5 103 294 148 347 1.08e-18 86.7

Find 116 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCGATGGTTGCTTAATTT+TGG 0.265425 4.2:-64060032 MS.gene71259:CDS
AACCTTAATCCCTTATCTTC+TGG 0.276851 4.2:+64056336 None:intergenic
CGAGCCCAAGAAAGTGTTTC+CGG 0.280740 4.2:+64056490 None:intergenic
GGTGAAAGCGGGACGAGTTC+CGG 0.283707 4.2:-64060099 MS.gene71259:CDS
ACCAACGGTGGCGGCGGAAT+TGG 0.314588 4.2:-64060275 MS.gene71259:CDS
TTGAAGAAGAGTGGTGGTTT+TGG 0.320949 4.2:+64060405 None:intergenic
TAGAACCGGAAACACTTTCT+TGG 0.331700 4.2:-64056495 MS.gene71259:CDS
GTCCAGAAGATAAGGGATTA+AGG 0.331702 4.2:-64056338 None:intergenic
CACTTAACATGAGCTTGTTT+TGG 0.340136 4.2:+64056534 None:intergenic
ACCGTTGGTGGATGCATAAA+TGG 0.349408 4.2:+64060289 None:intergenic
CTTATTGCTAAATTCTTCTT+CGG 0.353659 4.2:-64057881 MS.gene71259:CDS
CAACACTCAACAGGTGGCTT+TGG 0.358033 4.2:-64057737 MS.gene71259:intron
GTGAAAGCGGGACGAGTTCC+GGG 0.377853 4.2:-64060098 MS.gene71259:CDS
ATCTGCTTTGCTGTTAGAAC+CGG 0.383744 4.2:-64056509 MS.gene71259:CDS
GGATGCATAAATGGCGGTTA+TGG 0.384238 4.2:+64060298 None:intergenic
AGAACCGGAAACACTTTCTT+GGG 0.399853 4.2:-64056494 MS.gene71259:CDS
GGTGGCAGTGGAAGCGGTGG+AGG 0.402348 4.2:-64060245 MS.gene71259:CDS
ACTCAACAGGTGGCTTTGGC+TGG 0.406450 4.2:-64057733 MS.gene71259:intron
GATGCATAAATGGCGGTTAT+GGG 0.413302 4.2:+64060299 None:intergenic
GGCGGCGGAATTGGAGAATC+AGG 0.421149 4.2:-64060266 MS.gene71259:CDS
AAACAGAGAAGAAGCGTTGC+TGG 0.424722 4.2:-64060177 MS.gene71259:CDS
TGATGATTTGTTTCTTGCTA+AGG 0.429196 4.2:-64059985 MS.gene71259:CDS
ATTTCAGACTGCTGCGGAGT+TGG 0.438593 4.2:-64058148 MS.gene71259:intron
GGTGATGGTGGTGGCGATGA+TGG 0.440223 4.2:-64060221 MS.gene71259:CDS
AATTCCGCCGCCACCGTTGG+TGG 0.441978 4.2:+64060277 None:intergenic
TGGCAGTATCTAGCAACTTA+AGG 0.443496 4.2:-64056705 MS.gene71259:intron
GGCAGTGGAAGCGGTGGAGG+AGG 0.448523 4.2:-64060242 MS.gene71259:CDS
AGAGAAAGAACGAGGGTGGA+TGG 0.448523 4.2:+64060436 None:intergenic
GAGAGATGGGAGTGGGAGAG+AGG 0.449952 4.2:+64060382 None:intergenic
AAGCTATTTGCAGTTGGGAC+TGG 0.451891 4.2:-64057572 MS.gene71259:CDS
CCACCACCTTCCGTCAGTGC+TGG 0.454269 4.2:-64057905 MS.gene71259:CDS
TCCAATTCCGCCGCCACCGT+TGG 0.461696 4.2:+64060274 None:intergenic
ACGGGGAGTGAAGAGGTTGT+TGG 0.463805 4.2:+64060325 None:intergenic
GTGGATTATGCTCGCTGGGT+TGG 0.464416 4.2:-64056362 MS.gene71259:CDS
TGGACGACGGCGGGAGATGA+TGG 0.465286 4.2:+64060358 None:intergenic
ACCGCTTCGGCTAAATCCGC+TGG 0.467208 4.2:+64060119 None:intergenic
GTTTCTTGCTAAGGTTGCTA+TGG 0.467525 4.2:-64059976 MS.gene71259:CDS
AGAAGCGTTGCTGGTACTTA+CGG 0.475361 4.2:-64060168 MS.gene71259:CDS
CGTAGAGAAACCGTCGGAGC+AGG 0.477222 4.2:+64057929 None:intergenic
GGTGGGTGGATTATGCTCGC+TGG 0.481668 4.2:-64056367 MS.gene71259:CDS
TGTTGCCTATGGGGTTTACA+TGG 0.487654 4.2:-64056725 MS.gene71259:CDS
ATGAGAATGTGGACGACGGC+GGG 0.489108 4.2:+64060349 None:intergenic
GAAAGAACGAGGGTGGATGG+TGG 0.490060 4.2:+64060439 None:intergenic
TTATCAACGAGTGTTGCCTA+TGG 0.493065 4.2:-64056736 MS.gene71259:CDS
AGCGGTGGAGGAGGTGATGG+TGG 0.494404 4.2:-64060233 MS.gene71259:CDS
TACGGAAGTAGGTAAGTCAT+TGG 0.495225 4.2:-64060150 MS.gene71259:CDS
GAATCAGGTGGCAGTGGAAG+CGG 0.497526 4.2:-64060251 MS.gene71259:CDS
GGGTTGGAGTCCAGAAGATA+AGG 0.497889 4.2:-64056346 MS.gene71259:CDS
TATCAACGAGTGTTGCCTAT+GGG 0.498398 4.2:-64056735 MS.gene71259:CDS
TGATGGAGAGAGATGGGAGT+GGG 0.500386 4.2:+64060375 None:intergenic
TGTGTGGCTTCCTGCTCCGA+CGG 0.501035 4.2:-64057939 MS.gene71259:CDS
ACCAGGTATCAAATTCTAGC+TGG 0.501427 4.2:-64056593 MS.gene71259:intron
GGAGAGAGGTTGAAGAAGAG+TGG 0.502379 4.2:+64060396 None:intergenic
AGTTGGGACTGGTGCATCAC+TGG 0.504898 4.2:-64057561 MS.gene71259:intron
GCATCCACCAACGGTGGCGG+CGG 0.506271 4.2:-64060281 MS.gene71259:CDS
GGAAGCGGTGGAGGAGGTGA+TGG 0.507443 4.2:-64060236 MS.gene71259:CDS
GAGCTAAGCTATTTGCAGTT+GGG 0.507915 4.2:-64057577 MS.gene71259:CDS
CGCATTGATTAATGCGCGGA+AGG 0.511156 4.2:-64056803 MS.gene71259:CDS
TATTCACTTATACAGAGAAT+AGG 0.511633 4.2:-64057703 MS.gene71259:CDS
GGAGCTAAGCTATTTGCAGT+TGG 0.516112 4.2:-64057578 MS.gene71259:CDS
AAGCATAAAATCTGCTACAA+TGG 0.517084 4.2:+64057961 None:intergenic
CGGGAGATGATGGAGAGAGA+TGG 0.517838 4.2:+64060368 None:intergenic
AATGGCGGTTATGGGAGGAC+GGG 0.519477 4.2:+64060307 None:intergenic
TCGTCCCGCTTTCACCGCTT+CGG 0.521428 4.2:+64060106 None:intergenic
TACACTCCATCCCATGGCCA+TGG 0.528152 4.2:-64060480 None:intergenic
AGCAATAAGTCCAGCACTGA+CGG 0.529127 4.2:+64057895 None:intergenic
AGAGAGAGAAAGAACGAGGG+TGG 0.530359 4.2:+64060432 None:intergenic
TGGGAGGACGGGGAGTGAAG+AGG 0.531428 4.2:+64060318 None:intergenic
GGTGGAGGAGGTGATGGTGG+TGG 0.536613 4.2:-64060230 MS.gene71259:CDS
GTGGGTGGATTATGCTCGCT+GGG 0.540441 4.2:-64056366 MS.gene71259:CDS
ATGATGGAGAGAGATGGGAG+TGG 0.546774 4.2:+64060374 None:intergenic
TTAGCCGAAGCGGTGAAAGC+GGG 0.547028 4.2:-64060110 MS.gene71259:CDS
GGGAGATGATGGAGAGAGAT+GGG 0.548685 4.2:+64060369 None:intergenic
TATGCATCCACCAACGGTGG+CGG 0.553293 4.2:-64060284 MS.gene71259:CDS
TGGAGAGAGAGAAAGAACGA+GGG 0.556227 4.2:+64060429 None:intergenic
AAATGGCGGTTATGGGAGGA+CGG 0.556308 4.2:+64060306 None:intergenic
ATTGGAGAATCAGGTGGCAG+TGG 0.557497 4.2:-64060257 MS.gene71259:CDS
GAGAGGTTGAAGAAGAGTGG+TGG 0.558566 4.2:+64060399 None:intergenic
ACAGAGAATAGGTGCTATTG+TGG 0.560956 4.2:-64057692 MS.gene71259:intron
GCCATTTATGCATCCACCAA+CGG 0.563296 4.2:-64060290 MS.gene71259:CDS
TTGCTGGTACTTACGGAAGT+AGG 0.563924 4.2:-64060161 MS.gene71259:CDS
GGTTGGAGTCCAGAAGATAA+GGG 0.564296 4.2:-64056345 MS.gene71259:CDS
CGGTGTTGGCATCTTTACAA+AGG 0.571151 4.2:-64059949 MS.gene71259:intron
GCAACACTCGTTGATAATAC+CGG 0.574937 4.2:+64056742 None:intergenic
GTGGAGAGAGAGAAAGAACG+AGG 0.576448 4.2:+64060428 None:intergenic
TCAGGTGGCAGTGGAAGCGG+TGG 0.578703 4.2:-64060248 MS.gene71259:CDS
GTTGCTATGGAATGCGGTGT+TGG 0.583902 4.2:-64059963 MS.gene71259:CDS
CCAGCACTGACGGAAGGTGG+TGG 0.601074 4.2:+64057905 None:intergenic
TGATGAAGAAGCCATGGCCA+TGG 0.605310 4.2:+64060469 None:intergenic
AATCTCTTCACAATCGAACC+CGG 0.607903 4.2:+64060080 None:intergenic
TAGCTGGAATTATTGAACAA+CGG 0.608049 4.2:-64056577 MS.gene71259:CDS
TCATCTCTTCTGCAGCGGAA+CGG 0.609103 4.2:-64057599 MS.gene71259:intron
GCATAAATGGCGGTTATGGG+AGG 0.612260 4.2:+64060302 None:intergenic
TTTAGCCGAAGCGGTGAAAG+CGG 0.617657 4.2:-64060111 MS.gene71259:CDS
TGACGAGGCAGAGGAAGTAC+CGG 0.617957 4.2:-64056761 MS.gene71259:CDS
ATCAACGAGTGTTGCCTATG+GGG 0.625712 4.2:-64056734 MS.gene71259:CDS
AATGAGAATGTGGACGACGG+CGG 0.628298 4.2:+64060348 None:intergenic
AGTCCAGCACTGACGGAAGG+TGG 0.630398 4.2:+64057902 None:intergenic
GAATGATGATGAAGAAGCCA+TGG 0.630932 4.2:+64060463 None:intergenic
ATGGCGGTTATGGGAGGACG+GGG 0.632753 4.2:+64060308 None:intergenic
AGGTTGTTGGAATGAGAATG+TGG 0.632978 4.2:+64060338 None:intergenic
GATGAAGAAGCCATGGCCAT+GGG 0.633092 4.2:+64060470 None:intergenic
GCCAGCGGATTTAGCCGAAG+CGG 0.643103 4.2:-64060120 MS.gene71259:CDS
GCTAAGGTTGCTATGGAATG+CGG 0.648096 4.2:-64059969 MS.gene71259:CDS
ATAAGTCCAGCACTGACGGA+AGG 0.648262 4.2:+64057899 None:intergenic
GTCATTGGAGAATTTGCCAG+CGG 0.655188 4.2:-64060135 MS.gene71259:CDS
GGCGGAATTGGAGAATCAGG+TGG 0.664062 4.2:-64060263 MS.gene71259:CDS
TCTTCGCATGAATAGGTGGG+TGG 0.667742 4.2:-64056381 MS.gene71259:intron
TACTGCCATGTAAACCCCAT+AGG 0.674032 4.2:+64056720 None:intergenic
GTTTACATTTCAGACTGCTG+CGG 0.677064 4.2:-64058154 MS.gene71259:intron
TGGCGATGATGGTGAATCAG+AGG 0.693089 4.2:-64060210 MS.gene71259:CDS
ATTTATGCATCCACCAACGG+TGG 0.707895 4.2:-64060287 MS.gene71259:CDS
GTTGGTGGATGCATAAATGG+CGG 0.713035 4.2:+64060292 None:intergenic
CAAACGCATTGATTAATGCG+CGG 0.722511 4.2:-64056807 MS.gene71259:CDS
GGTGGTCGTAGAGAAACCGT+CGG 0.726635 4.2:+64057923 None:intergenic
TGGAATGAGAATGTGGACGA+CGG 0.784154 4.2:+64060345 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTAATTTAATTATTAAT+AGG - chr4.2:64058817-64058836 MS.gene71259:intron 0.0%
!! ACAATAGTATAATATATTAT+TGG - chr4.2:64058220-64058239 MS.gene71259:intron 10.0%
!! ATAAATATATTAAGAGAAAA+AGG - chr4.2:64057709-64057728 MS.gene71259:CDS 10.0%
!! ATCATTTAACAAATATTATT+TGG - chr4.2:64058286-64058305 MS.gene71259:intron 10.0%
!! ATTATATACTAATTATTACA+TGG + chr4.2:64059910-64059929 None:intergenic 10.0%
!! ATTTAATTATTAATAGGTAA+TGG - chr4.2:64058823-64058842 MS.gene71259:intron 10.0%
!! CAATAGTATAATATATTATT+GGG - chr4.2:64058221-64058240 MS.gene71259:intron 10.0%
!! GATTATTAAAAAAGATAATT+TGG + chr4.2:64058786-64058805 None:intergenic 10.0%
!! TAATATATATGTAATGAATA+TGG + chr4.2:64059641-64059660 None:intergenic 10.0%
!! TAATTTAAATATGTTTATGA+TGG + chr4.2:64058455-64058474 None:intergenic 10.0%
!! AAACTAGATAGTATTATTAA+AGG - chr4.2:64057164-64057183 MS.gene71259:intron 15.0%
!! AGTAAATTATATAGAAATGA+AGG + chr4.2:64060366-64060385 None:intergenic 15.0%
!! ATTAAAAAAGATAATTTGGA+AGG + chr4.2:64058782-64058801 None:intergenic 15.0%
!! TTAAAAAAGATAATTTGGAA+GGG + chr4.2:64058781-64058800 None:intergenic 15.0%
!! TTTAATAATACTATCTAGTT+TGG + chr4.2:64057165-64057184 None:intergenic 15.0%
!!! ACAAATTTTGTTTTTATATC+AGG - chr4.2:64058134-64058153 MS.gene71259:CDS 15.0%
!!! TGATACAATACATTATATTT+TGG - chr4.2:64058543-64058562 MS.gene71259:intron 15.0%
!! ATAGTTATTATGCATTATTG+AGG + chr4.2:64060144-64060163 None:intergenic 20.0%
!! ATTAAAGGTTAAATTGTAAG+TGG - chr4.2:64057179-64057198 MS.gene71259:intron 20.0%
!! TATTAAGAGAAAAAGGTAAT+TGG - chr4.2:64057716-64057735 MS.gene71259:CDS 20.0%
!! TTAACCACTTATTATCAAAT+TGG + chr4.2:64057218-64057237 None:intergenic 20.0%
!!! ATTGGTATTGTTATTCTAAA+TGG - chr4.2:64057892-64057911 MS.gene71259:CDS 20.0%
!!! ATTTAGAATAACAATACCAA+TGG + chr4.2:64057893-64057912 None:intergenic 20.0%
!!! TAAATATGTTTATGATGGAA+TGG + chr4.2:64058450-64058469 None:intergenic 20.0%
!!! TGGAACTTTTGTTTTATAAT+AGG - chr4.2:64058182-64058201 MS.gene71259:intron 20.0%
!!! TTATTTTACTTTTTCATGCT+TGG - chr4.2:64059002-64059021 MS.gene71259:intron 20.0%
!!! TTCATTAGTTTTTATCTCAT+TGG + chr4.2:64057524-64057543 None:intergenic 20.0%
!!! TTTAAGATAATCTTCCTTTA+AGG - chr4.2:64059816-64059835 MS.gene71259:intron 20.0%
!!! TTTAGAATAACAATACCAAT+GGG + chr4.2:64057892-64057911 None:intergenic 20.0%
! AATATATAGACCAATTTGAC+CGG - chr4.2:64057237-64057256 MS.gene71259:intron 25.0%
! AATCGACATTTAATACATGA+CGG + chr4.2:64057571-64057590 None:intergenic 25.0%
! ATTTATGTTCTCCAATCAAT+TGG + chr4.2:64059779-64059798 None:intergenic 25.0%
! CTTATTGCTAAATTCTTCTT+CGG - chr4.2:64058926-64058945 MS.gene71259:intron 25.0%
! GAACTTCAAAACAAAAGAAT+TGG - chr4.2:64059359-64059378 MS.gene71259:intron 25.0%
! GATTCATGTAACAAATAATG+AGG + chr4.2:64060408-64060427 None:intergenic 25.0%
! TATATGTTTGCTTCGTTAAT+AGG - chr4.2:64057374-64057393 MS.gene71259:intron 25.0%
! TATTCACTTATACAGAGAAT+AGG - chr4.2:64059104-64059123 MS.gene71259:intron 25.0%
! TTAGAATAACAATACCAATG+GGG + chr4.2:64057891-64057910 None:intergenic 25.0%
! TTGTAGTATATTCATCAATG+AGG - chr4.2:64059937-64059956 MS.gene71259:intron 25.0%
!! TTCTTTATTTAGTTTCCCAT+AGG - chr4.2:64057786-64057805 MS.gene71259:intron 25.0%
!! TTTTCATGGTAACTAAAGAT+AGG - chr4.2:64059685-64059704 MS.gene71259:intron 25.0%
!!! GTAACAATGAAGTTTGTTAA+TGG - chr4.2:64058308-64058327 MS.gene71259:intron 25.0%
AAAAATCAAGTGTGTTTCGA+TGG - chr4.2:64056761-64056780 MS.gene71259:CDS 30.0%
AAAGTTTACACATGAAAGCA+AGG - chr4.2:64056984-64057003 MS.gene71259:intron 30.0%
AACGCAACATTCATTACAAA+TGG + chr4.2:64058636-64058655 None:intergenic 30.0%
AACTATATAGTAGGACTGTA+GGG - chr4.2:64059543-64059562 MS.gene71259:intron 30.0%
AAGCATAAAATCTGCTACAA+TGG + chr4.2:64058849-64058868 None:intergenic 30.0%
AATAAGATTCACTCCAACTA+AGG + chr4.2:64057815-64057834 None:intergenic 30.0%
AATTAGACTTGTATTGCCAA+TGG - chr4.2:64057402-64057421 MS.gene71259:intron 30.0%
ACACCATAATGACATTGTTA+AGG + chr4.2:64059330-64059349 None:intergenic 30.0%
AGCAAACATATAACTGATCT+AGG + chr4.2:64057366-64057385 None:intergenic 30.0%
ATTTGACCGGTTAAAAAAGT+CGG - chr4.2:64057250-64057269 MS.gene71259:intron 30.0%
CACCATAATGACATTGTTAA+GGG + chr4.2:64059329-64059348 None:intergenic 30.0%
CATGTTCACAACTATATAGT+AGG - chr4.2:64059534-64059553 MS.gene71259:intron 30.0%
CATTCATTACAAATGGATGA+TGG + chr4.2:64058629-64058648 None:intergenic 30.0%
TACAAAACCAAGGACTAATT+TGG - chr4.2:64057322-64057341 MS.gene71259:intron 30.0%
TAGATGGATAAAACATGGTT+GGG - chr4.2:64058048-64058067 MS.gene71259:intron 30.0%
TAGCTAATTTCCAAAGTAAG+CGG + chr4.2:64059721-64059740 None:intergenic 30.0%
TAGCTGGAATTATTGAACAA+CGG - chr4.2:64060230-64060249 MS.gene71259:CDS 30.0%
TCAATCATGTAGCACTATAT+TGG + chr4.2:64056927-64056946 None:intergenic 30.0%
TTCAGAGTTTCTATCTAAAC+TGG + chr4.2:64058366-64058385 None:intergenic 30.0%
TTTCATGCTTGGATAGATAT+TGG - chr4.2:64059013-64059032 MS.gene71259:intron 30.0%
! AAGCATAAGCCTGAATTTTA+GGG + chr4.2:64059859-64059878 None:intergenic 30.0%
! ATTAGACTAAGCAGTTTTCA+TGG - chr4.2:64059671-64059690 MS.gene71259:intron 30.0%
! GAGACCAATTTGATAATAAG+TGG - chr4.2:64057211-64057230 MS.gene71259:intron 30.0%
! TAAGCATAAGCCTGAATTTT+AGG + chr4.2:64059860-64059879 None:intergenic 30.0%
! TACAATTTTCTAGATGCAAC+AGG + chr4.2:64058575-64058594 None:intergenic 30.0%
! TCTATGCAACGTTTTTACAT+CGG + chr4.2:64059431-64059450 None:intergenic 30.0%
! TTTCGATGGTTGCTTAATTT+TGG - chr4.2:64056775-64056794 MS.gene71259:CDS 30.0%
!! ATTAGTGATTTTGAGAGTCA+GGG - chr4.2:64057138-64057157 MS.gene71259:intron 30.0%
!! TATTAGTGATTTTGAGAGTC+AGG - chr4.2:64057137-64057156 MS.gene71259:intron 30.0%
!! TGAAGTTTGTTAATGGTTAC+AGG - chr4.2:64058315-64058334 MS.gene71259:intron 30.0%
!! TGATGATTTGTTTCTTGCTA+AGG - chr4.2:64056822-64056841 MS.gene71259:CDS 30.0%
!! TTAGTTTTTATCTCATTGGC+AGG + chr4.2:64057520-64057539 None:intergenic 30.0%
!!! AAATTAGTCCTTGGTTTTGT+AGG + chr4.2:64057323-64057342 None:intergenic 30.0%
!!! AATGCTTTTCAGGTTAACAA+CGG - chr4.2:64058959-64058978 MS.gene71259:intron 30.0%
!!! AATTAGTCCTTGGTTTTGTA+GGG + chr4.2:64057322-64057341 None:intergenic 30.0%
!!! ACTTTTTTAACCGGTCAAAT+TGG + chr4.2:64057250-64057269 None:intergenic 30.0%
!!! TAACCTGAAAAGCATTTTCA+GGG + chr4.2:64058955-64058974 None:intergenic 30.0%
!!! TTAACCTGAAAAGCATTTTC+AGG + chr4.2:64058956-64058975 None:intergenic 30.0%
AATAACAATACCAATGGGGT+TGG + chr4.2:64057887-64057906 None:intergenic 35.0%
ACATGAATCTTCGCATGAAT+AGG - chr4.2:64060419-64060438 MS.gene71259:CDS 35.0%
AGACTTCAGTTGCTAAAGAT+TGG + chr4.2:64058522-64058541 None:intergenic 35.0%
ATAACAATACCAATGGGGTT+GGG + chr4.2:64057886-64057905 None:intergenic 35.0%
ATTCAGGCTTATGCTTAACT+CGG - chr4.2:64059863-64059882 MS.gene71259:intron 35.0%
ATTGGGTCTTGATTCTTGAA+CGG - chr4.2:64058238-64058257 MS.gene71259:intron 35.0%
CAACTATATAGTAGGACTGT+AGG - chr4.2:64059542-64059561 MS.gene71259:intron 35.0%
CACCATATTTCAGTTTACCT+AGG + chr4.2:64057688-64057707 None:intergenic 35.0%
CTAATCTCTGCTGAAGAATT+TGG + chr4.2:64058109-64058128 None:intergenic 35.0%
CTCCTAGGTAAACTGAAATA+TGG - chr4.2:64057683-64057702 MS.gene71259:intron 35.0%
GACCCTTAACAATGTCATTA+TGG - chr4.2:64059324-64059343 MS.gene71259:intron 35.0%
GTAGATGGATAAAACATGGT+TGG - chr4.2:64058047-64058066 MS.gene71259:intron 35.0%
GTGAACATGAGTGCAAAATA+TGG + chr4.2:64059523-64059542 None:intergenic 35.0%
GTTGGAGTGAATCTTATTCA+AGG - chr4.2:64057817-64057836 MS.gene71259:intron 35.0%
TAACTTTGTCAACACTCAAC+AGG - chr4.2:64059061-64059080 MS.gene71259:intron 35.0%
TAATGACATTGTTAAGGGTC+TGG + chr4.2:64059324-64059343 None:intergenic 35.0%
TAGCAACTCAGTTGTACTTA+CGG + chr4.2:64057939-64057958 None:intergenic 35.0%
TGAACAACCAAATTAGTCCT+TGG + chr4.2:64057332-64057351 None:intergenic 35.0%
TTTGACCGGTTAAAAAAGTC+GGG - chr4.2:64057251-64057270 MS.gene71259:intron 35.0%
! ACCATGTTTTATCCATCTAC+AGG + chr4.2:64058047-64058066 None:intergenic 35.0%
! AGCATAAGCCTGAATTTTAG+GGG + chr4.2:64059858-64059877 None:intergenic 35.0%
! CCATGTTTTATCCATCTACA+GGG + chr4.2:64058046-64058065 None:intergenic 35.0%
! TAGCAGATTTTATGCTTGTG+TGG - chr4.2:64058852-64058871 MS.gene71259:intron 35.0%
! TCGTACTGGCAATTGAATTT+GGG - chr4.2:64057993-64058012 MS.gene71259:intron 35.0%
! TGATAAATCTTTTGCTGACG+AGG - chr4.2:64060031-64060050 MS.gene71259:CDS 35.0%
! TTATGATGGAATGGAGTTGT+TGG + chr4.2:64058441-64058460 None:intergenic 35.0%
! TTCGTACTGGCAATTGAATT+TGG - chr4.2:64057992-64058011 MS.gene71259:intron 35.0%
!! ACGTTTTTACATCGGTTGAA+AGG + chr4.2:64059423-64059442 None:intergenic 35.0%
!! CACTTAACATGAGCTTGTTT+TGG + chr4.2:64060276-64060295 None:intergenic 35.0%
!! GAAACTCTGAAGAAGTACTT+TGG - chr4.2:64058375-64058394 MS.gene71259:intron 35.0%
!! GATGGTTGCTTAATTTTGGT+GGG - chr4.2:64056779-64056798 MS.gene71259:CDS 35.0%
!! TGATTTTGTTTGTGCTGATG+TGG - chr4.2:64058713-64058732 MS.gene71259:intron 35.0%
!!! AGATTCCCGACTTTTTTAAC+CGG + chr4.2:64057259-64057278 None:intergenic 35.0%
AACATTGTCACCGCTTACTT+TGG - chr4.2:64059708-64059727 MS.gene71259:intron 40.0%
AACTGATAGAGAAAGCAACG+CGG + chr4.2:64059469-64059488 None:intergenic 40.0%
AAGATTGGCATGTAGCTGAA+TGG + chr4.2:64058507-64058526 None:intergenic 40.0%
AATCTCTTCACAATCGAACC+CGG + chr4.2:64056730-64056749 None:intergenic 40.0%
AATTGGATTCCAGCACTCAT+AGG + chr4.2:64059762-64059781 None:intergenic 40.0%
AATTGTCTCTGATCTCTACC+AGG - chr4.2:64060197-64060216 MS.gene71259:CDS 40.0%
ACACCAGTACCAATCTGAAA+AGG + chr4.2:64059978-64059997 None:intergenic 40.0%
ACCAGGTATCAAATTCTAGC+TGG - chr4.2:64060214-64060233 MS.gene71259:CDS 40.0%
ACCTAGGAGCTACACTAATT+GGG + chr4.2:64057672-64057691 None:intergenic 40.0%
ACTCCAACTAAGGTAACCTA+TGG + chr4.2:64057805-64057824 None:intergenic 40.0%
AGAACCGGAAACACTTTCTT+GGG - chr4.2:64060313-64060332 MS.gene71259:CDS 40.0%
AGCAACTCAGTTGTACTTAC+GGG + chr4.2:64057938-64057957 None:intergenic 40.0%
AGGTTGTTGGAATGAGAATG+TGG + chr4.2:64056472-64056491 None:intergenic 40.0%
ATGGATAAAACATGGTTGGG+AGG - chr4.2:64058051-64058070 MS.gene71259:intron 40.0%
ATTGGATTCCAGCACTCATA+GGG + chr4.2:64059761-64059780 None:intergenic 40.0%
CAAAGCAACAAAAAGCGACA+AGG + chr4.2:64059587-64059606 None:intergenic 40.0%
CAAGCATCACTTGACCTTAA+AGG + chr4.2:64059833-64059852 None:intergenic 40.0%
CATAATCATCTCTTCTGCAG+CGG - chr4.2:64059203-64059222 MS.gene71259:intron 40.0%
CCCTGTAGATGGATAAAACA+TGG - chr4.2:64058043-64058062 MS.gene71259:intron 40.0%
CGATGGACATTTGATAAGCT+GGG - chr4.2:64057962-64057981 MS.gene71259:CDS 40.0%
CTATCATGAGTAGATGGAGA+CGG + chr4.2:64057437-64057456 None:intergenic 40.0%
CTCCAACTAAGGTAACCTAT+GGG + chr4.2:64057804-64057823 None:intergenic 40.0%
GAAGAATTTGGATGGTCAGT+TGG + chr4.2:64058097-64058116 None:intergenic 40.0%
GAATCTTCGCATGAATAGGT+GGG - chr4.2:64060423-64060442 MS.gene71259:CDS 40.0%
GAATTTGGGTCCCTTGATTA+AGG - chr4.2:64058007-64058026 MS.gene71259:intron 40.0%
GAGCTAAGCTATTTGCAGTT+GGG - chr4.2:64059230-64059249 MS.gene71259:intron 40.0%
GAGTCCGATACCTTAATCAA+GGG + chr4.2:64058020-64058039 None:intergenic 40.0%
GATGCATAAATGGCGGTTAT+GGG + chr4.2:64056511-64056530 None:intergenic 40.0%
GATGGACATTTGATAAGCTG+GGG - chr4.2:64057963-64057982 MS.gene71259:CDS 40.0%
GCATGTCTATCATGAGTAGA+TGG + chr4.2:64057443-64057462 None:intergenic 40.0%
GTTTACATTTCAGACTGCTG+CGG - chr4.2:64058653-64058672 MS.gene71259:intron 40.0%
GTTTCTTGCTAAGGTTGCTA+TGG - chr4.2:64056831-64056850 MS.gene71259:intron 40.0%
TACCTAGGAGCTACACTAAT+TGG + chr4.2:64057673-64057692 None:intergenic 40.0%
TACGGAAGTAGGTAAGTCAT+TGG - chr4.2:64056657-64056676 MS.gene71259:intron 40.0%
TAGAACCGGAAACACTTTCT+TGG - chr4.2:64060312-64060331 MS.gene71259:CDS 40.0%
TATCATGAGTAGATGGAGAC+GGG + chr4.2:64057436-64057455 None:intergenic 40.0%
TCCAGCTAGAATTTGATACC+TGG + chr4.2:64060218-64060237 None:intergenic 40.0%
TCGATGGACATTTGATAAGC+TGG - chr4.2:64057961-64057980 MS.gene71259:CDS 40.0%
TCTCTGCTGAAGAATTTGGA+TGG + chr4.2:64058105-64058124 None:intergenic 40.0%
TGAATCTTCGCATGAATAGG+TGG - chr4.2:64060422-64060441 MS.gene71259:CDS 40.0%
TGAGTCCGATACCTTAATCA+AGG + chr4.2:64058021-64058040 None:intergenic 40.0%
TGCTTGTTCCCCTAAAATTC+AGG - chr4.2:64059847-64059866 MS.gene71259:intron 40.0%
TGGATAAAACATGGTTGGGA+GGG - chr4.2:64058052-64058071 MS.gene71259:intron 40.0%
TGGCAGTATCTAGCAACTTA+AGG - chr4.2:64060102-64060121 MS.gene71259:CDS 40.0%
TGTGTCAGTAACTCGTTGTT+GGG - chr4.2:64057023-64057042 MS.gene71259:intron 40.0%
TTCAGGCTTATGCTTAACTC+GGG - chr4.2:64059864-64059883 MS.gene71259:intron 40.0%
TTCCCATAGGTTACCTTAGT+TGG - chr4.2:64057799-64057818 MS.gene71259:intron 40.0%
TTGGGTCTTGATTCTTGAAC+GGG - chr4.2:64058239-64058258 MS.gene71259:intron 40.0%
! AGTGCTGGAATCCAATTGAT+TGG - chr4.2:64059765-64059784 MS.gene71259:intron 40.0%
! CGATGGTTGCTTAATTTTGG+TGG - chr4.2:64056778-64056797 MS.gene71259:CDS 40.0%
! GAATGATGATGAAGAAGCCA+TGG + chr4.2:64056347-64056366 None:intergenic 40.0%
! TATCAACGAGTGTTGCCTAT+GGG - chr4.2:64060072-64060091 MS.gene71259:CDS 40.0%
! TGAAGAAGAGTGGTGGTTTT+GGG + chr4.2:64056404-64056423 None:intergenic 40.0%
! TTATCAACGAGTGTTGCCTA+TGG - chr4.2:64060071-64060090 MS.gene71259:CDS 40.0%
! TTGAAGAAGAGTGGTGGTTT+TGG + chr4.2:64056405-64056424 None:intergenic 40.0%
! TTGCCTTTTCAGATTGGTAC+TGG - chr4.2:64059972-64059991 MS.gene71259:CDS 40.0%
!! ACAGAGAATAGGTGCTATTG+TGG - chr4.2:64059115-64059134 MS.gene71259:intron 40.0%
!! ATCTGCTTTGCTGTTAGAAC+CGG - chr4.2:64060298-64060317 MS.gene71259:CDS 40.0%
!! CAAACGCATTGATTAATGCG+CGG - chr4.2:64060000-64060019 MS.gene71259:CDS 40.0%
!! CATGACTTGCCTTTTCAGAT+TGG - chr4.2:64059966-64059985 MS.gene71259:CDS 40.0%
!! GCAACACTCGTTGATAATAC+CGG + chr4.2:64060068-64060087 None:intergenic 40.0%
!!! CTTGTCGCTTTTTGTTGCTT+TGG - chr4.2:64059585-64059604 MS.gene71259:intron 40.0%
AAGCTATTTGCAGTTGGGAC+TGG - chr4.2:64059235-64059254 MS.gene71259:intron 45.0%
ACACATGAAAGCAAGGCAAG+CGG - chr4.2:64056991-64057010 MS.gene71259:intron 45.0%
ACTCATAGGGAAGTAGAGAG+AGG + chr4.2:64059748-64059767 None:intergenic 45.0%
ATTTATGCATCCACCAACGG+TGG - chr4.2:64056520-64056539 MS.gene71259:CDS 45.0%
CATTTGATAAGCTGGGGTGT+TGG - chr4.2:64057969-64057988 MS.gene71259:CDS 45.0%
CTAATTCTGACAGCAGAAGG+AGG - chr4.2:64057463-64057482 MS.gene71259:intron 45.0%
CTCCTTCTGCTGTCAGAATT+AGG + chr4.2:64057465-64057484 None:intergenic 45.0%
CTGTGTCAGTAACTCGTTGT+TGG - chr4.2:64057022-64057041 MS.gene71259:intron 45.0%
CTTTGTCAACACTCAACAGG+TGG - chr4.2:64059064-64059083 MS.gene71259:intron 45.0%
GATTCTTGAACGGGGAACAT+AGG - chr4.2:64058248-64058267 MS.gene71259:intron 45.0%
GCCATTTATGCATCCACCAA+CGG - chr4.2:64056517-64056536 MS.gene71259:CDS 45.0%
GCTAAGGTTGCTATGGAATG+CGG - chr4.2:64056838-64056857 MS.gene71259:intron 45.0%
GGAGCTAAGCTATTTGCAGT+TGG - chr4.2:64059229-64059248 MS.gene71259:intron 45.0%
GGATAAAACATGGTTGGGAG+GGG - chr4.2:64058053-64058072 MS.gene71259:intron 45.0%
GGATGCATAAATGGCGGTTA+TGG + chr4.2:64056512-64056531 None:intergenic 45.0%
GGGGAACATAGGATGGTAAA+GGG - chr4.2:64058259-64058278 MS.gene71259:intron 45.0%
GGGTCCCTTGATTAAGGTAT+CGG - chr4.2:64058013-64058032 MS.gene71259:intron 45.0%
GGTTGGAGTCCAGAAGATAA+GGG - chr4.2:64060462-64060481 MS.gene71259:CDS 45.0%
GTCATTGGAGAATTTGCCAG+CGG - chr4.2:64056672-64056691 MS.gene71259:intron 45.0%
TACTGCCATGTAAACCCCAT+AGG + chr4.2:64060090-64060109 None:intergenic 45.0%
TATGCTTAACTCGGGTGTCT+TGG - chr4.2:64059872-64059891 MS.gene71259:intron 45.0%
TCCCAATTAGTGTAGCTCCT+AGG - chr4.2:64057668-64057687 MS.gene71259:intron 45.0%
TGCCTAATTCTGACAGCAGA+AGG - chr4.2:64057460-64057479 MS.gene71259:intron 45.0%
TGGAATGAGAATGTGGACGA+CGG + chr4.2:64056465-64056484 None:intergenic 45.0%
TGGAGAGAGAGAAAGAACGA+GGG + chr4.2:64056381-64056400 None:intergenic 45.0%
TGGGTCTTGATTCTTGAACG+GGG - chr4.2:64058240-64058259 MS.gene71259:intron 45.0%
TGTTGCCTATGGGGTTTACA+TGG - chr4.2:64060082-64060101 MS.gene71259:CDS 45.0%
TTGCTGGTACTTACGGAAGT+AGG - chr4.2:64056646-64056665 MS.gene71259:intron 45.0%
! ACCGTTGGTGGATGCATAAA+TGG + chr4.2:64056521-64056540 None:intergenic 45.0%
! AGCAATAAGTCCAGCACTGA+CGG + chr4.2:64058915-64058934 None:intergenic 45.0%
! ATCAACGAGTGTTGCCTATG+GGG - chr4.2:64060073-64060092 MS.gene71259:CDS 45.0%
! CTGCCCTGAAAATGCTTTTC+AGG - chr4.2:64058949-64058968 MS.gene71259:intron 45.0%
! GTTGGTGGATGCATAAATGG+CGG + chr4.2:64056518-64056537 None:intergenic 45.0%
!! AAACAGAGAAGAAGCGTTGC+TGG - chr4.2:64056630-64056649 MS.gene71259:intron 45.0%
!! AGAAGCGTTGCTGGTACTTA+CGG - chr4.2:64056639-64056658 MS.gene71259:intron 45.0%
!! CGGTGTTGGCATCTTTACAA+AGG - chr4.2:64056858-64056877 MS.gene71259:intron 45.0%
!!! AGCTTGTTTTGGTGCAGCAA+AGG + chr4.2:64060265-64060284 None:intergenic 45.0%
!! ATAAACATATTTAAATTATA+AGG - chr4.2:64058457-64058476 MS.gene71259:intron 5.0%
!! TTATTGAAAATATATATAAT+TGG - chr4.2:64058162-64058181 MS.gene71259:intron 5.0%
AAATGGCGGTTATGGGAGGA+CGG + chr4.2:64056504-64056523 None:intergenic 50.0%
AATGAGAATGTGGACGACGG+CGG + chr4.2:64056462-64056481 None:intergenic 50.0%
AGAGAAAGAACGAGGGTGGA+TGG + chr4.2:64056374-64056393 None:intergenic 50.0%
AGAGAGAGAAAGAACGAGGG+TGG + chr4.2:64056378-64056397 None:intergenic 50.0%
AGGGGAGACTCTACTAAAGG+TGG - chr4.2:64058071-64058090 MS.gene71259:intron 50.0%
ATTGGAGAATCAGGTGGCAG+TGG - chr4.2:64056550-64056569 MS.gene71259:CDS 50.0%
ATTTCAGACTGCTGCGGAGT+TGG - chr4.2:64058659-64058678 MS.gene71259:intron 50.0%
CAACACTCAACAGGTGGCTT+TGG - chr4.2:64059070-64059089 MS.gene71259:intron 50.0%
CAACTGAGTTGCTAGCTCGA+TGG - chr4.2:64057945-64057964 MS.gene71259:CDS 50.0%
CACATGAAAGCAAGGCAAGC+GGG - chr4.2:64056992-64057011 MS.gene71259:intron 50.0%
CGGGGAACATAGGATGGTAA+AGG - chr4.2:64058258-64058277 MS.gene71259:intron 50.0%
CTCTACTTCCCTATGAGTGC+TGG - chr4.2:64059750-64059769 MS.gene71259:intron 50.0%
CTTGAACGGGGAACATAGGA+TGG - chr4.2:64058252-64058271 MS.gene71259:intron 50.0%
GAGAGGTTGAAGAAGAGTGG+TGG + chr4.2:64056411-64056430 None:intergenic 50.0%
GCATAAATGGCGGTTATGGG+AGG + chr4.2:64056508-64056527 None:intergenic 50.0%
GGAGAGAGGTTGAAGAAGAG+TGG + chr4.2:64056414-64056433 None:intergenic 50.0%
GGGTTGGAGTCCAGAAGATA+AGG - chr4.2:64060461-64060480 MS.gene71259:CDS 50.0%
GTGGAGAGAGAGAAAGAACG+AGG + chr4.2:64056382-64056401 None:intergenic 50.0%
GTTGCTATGGAATGCGGTGT+TGG - chr4.2:64056844-64056863 MS.gene71259:intron 50.0%
TCATCTCTTCTGCAGCGGAA+CGG - chr4.2:64059208-64059227 MS.gene71259:intron 50.0%
TCGGACTCAAACCCTGTAGA+TGG - chr4.2:64058032-64058051 MS.gene71259:intron 50.0%
TCTTCGCATGAATAGGTGGG+TGG - chr4.2:64060426-64060445 MS.gene71259:CDS 50.0%
TGATGGAGAGAGATGGGAGT+GGG + chr4.2:64056435-64056454 None:intergenic 50.0%
TTTAGCCGAAGCGGTGAAAG+CGG - chr4.2:64056696-64056715 MS.gene71259:intron 50.0%
TTTGCTAGACCCAACCCCAT+TGG - chr4.2:64057874-64057893 MS.gene71259:CDS 50.0%
! ATCTTTTGCTGACGAGGCAG+AGG - chr4.2:64060037-64060056 MS.gene71259:CDS 50.0%
! ATGATGGAGAGAGATGGGAG+TGG + chr4.2:64056436-64056455 None:intergenic 50.0%
! TGGCGATGATGGTGAATCAG+AGG - chr4.2:64056597-64056616 MS.gene71259:intron 50.0%
!! ATAAGTCCAGCACTGACGGA+AGG + chr4.2:64058911-64058930 None:intergenic 50.0%
!! CGAGCCCAAGAAAGTGTTTC+CGG + chr4.2:64060320-64060339 None:intergenic 50.0%
!! CGCATTGATTAATGCGCGGA+AGG - chr4.2:64060004-64060023 MS.gene71259:CDS 50.0%
!! GGGAGATGATGGAGAGAGAT+GGG + chr4.2:64056441-64056460 None:intergenic 50.0%
!!! AGAAGAGTGGTGGTTTTGGG+TGG + chr4.2:64056401-64056420 None:intergenic 50.0%
AATGGCGGTTATGGGAGGAC+GGG + chr4.2:64056503-64056522 None:intergenic 55.0%
ACGGGGAGTGAAGAGGTTGT+TGG + chr4.2:64056485-64056504 None:intergenic 55.0%
ATGAGAATGTGGACGACGGC+GGG + chr4.2:64056461-64056480 None:intergenic 55.0%
GAAAGAACGAGGGTGGATGG+TGG + chr4.2:64056371-64056390 None:intergenic 55.0%
GAATCAGGTGGCAGTGGAAG+CGG - chr4.2:64056556-64056575 MS.gene71259:CDS 55.0%
GGCGGAATTGGAGAATCAGG+TGG - chr4.2:64056544-64056563 MS.gene71259:CDS 55.0%
GGGAGGGGAGACTCTACTAA+AGG - chr4.2:64058068-64058087 MS.gene71259:intron 55.0%
GGTGGTCGTAGAGAAACCGT+CGG + chr4.2:64058887-64058906 None:intergenic 55.0%
TATGCATCCACCAACGGTGG+CGG - chr4.2:64056523-64056542 MS.gene71259:CDS 55.0%
TTAGCCGAAGCGGTGAAAGC+GGG - chr4.2:64056697-64056716 MS.gene71259:intron 55.0%
! AGTTGGGACTGGTGCATCAC+TGG - chr4.2:64059246-64059265 MS.gene71259:intron 55.0%
! GTGGATTATGCTCGCTGGGT+TGG - chr4.2:64060445-64060464 MS.gene71259:CDS 55.0%
! TGACGAGGCAGAGGAAGTAC+CGG - chr4.2:64060046-64060065 MS.gene71259:CDS 55.0%
!! ACTCAACAGGTGGCTTTGGC+TGG - chr4.2:64059074-64059093 MS.gene71259:intron 55.0%
!! CGGGAGATGATGGAGAGAGA+TGG + chr4.2:64056442-64056461 None:intergenic 55.0%
!! GAGAGCGCCCTACAAAACCA+AGG - chr4.2:64057312-64057331 MS.gene71259:intron 55.0%
!! GTGGGTGGATTATGCTCGCT+GGG - chr4.2:64060441-64060460 MS.gene71259:CDS 55.0%
ACCGCTTCGGCTAAATCCGC+TGG + chr4.2:64056691-64056710 None:intergenic 60.0%
ATGGCGGTTATGGGAGGACG+GGG + chr4.2:64056502-64056521 None:intergenic 60.0%
CGTAGAGAAACCGTCGGAGC+AGG + chr4.2:64058881-64058900 None:intergenic 60.0%
GAGACGGGCGTATGAGCCAT+TGG + chr4.2:64057421-64057440 None:intergenic 60.0%
GAGAGATGGGAGTGGGAGAG+AGG + chr4.2:64056428-64056447 None:intergenic 60.0%
GGCGGCGGAATTGGAGAATC+AGG - chr4.2:64056541-64056560 MS.gene71259:CDS 60.0%
GGTGAAAGCGGGACGAGTTC+CGG - chr4.2:64056708-64056727 MS.gene71259:CDS 60.0%
GTGAAAGCGGGACGAGTTCC+GGG - chr4.2:64056709-64056728 MS.gene71259:CDS 60.0%
TCGTCCCGCTTTCACCGCTT+CGG + chr4.2:64056704-64056723 None:intergenic 60.0%
TGTGTGGCTTCCTGCTCCGA+CGG - chr4.2:64058868-64058887 MS.gene71259:intron 60.0%
! GCCAGCGGATTTAGCCGAAG+CGG - chr4.2:64056687-64056706 MS.gene71259:intron 60.0%
!! AGTCCAGCACTGACGGAAGG+TGG + chr4.2:64058908-64058927 None:intergenic 60.0%
!! GCTGGGGTGTTGGTTCGTAC+TGG - chr4.2:64057979-64057998 MS.gene71259:intron 60.0%
!! GGTGATGGTGGTGGCGATGA+TGG - chr4.2:64056586-64056605 MS.gene71259:CDS 60.0%
!! GGTGGGTGGATTATGCTCGC+TGG - chr4.2:64060440-64060459 MS.gene71259:CDS 60.0%
AATTCCGCCGCCACCGTTGG+TGG + chr4.2:64056533-64056552 None:intergenic 65.0%
CCACCACCTTCCGTCAGTGC+TGG - chr4.2:64058902-64058921 MS.gene71259:intron 65.0%
GGAAGCGGTGGAGGAGGTGA+TGG - chr4.2:64056571-64056590 MS.gene71259:CDS 65.0%
TCAGGTGGCAGTGGAAGCGG+TGG - chr4.2:64056559-64056578 MS.gene71259:CDS 65.0%
TCCAATTCCGCCGCCACCGT+TGG + chr4.2:64056536-64056555 None:intergenic 65.0%
TGGACGACGGCGGGAGATGA+TGG + chr4.2:64056452-64056471 None:intergenic 65.0%
TGGGAGGACGGGGAGTGAAG+AGG + chr4.2:64056492-64056511 None:intergenic 65.0%
! ACCAACGGTGGCGGCGGAAT+TGG - chr4.2:64056532-64056551 MS.gene71259:CDS 65.0%
! AGCGGTGGAGGAGGTGATGG+TGG - chr4.2:64056574-64056593 MS.gene71259:CDS 65.0%
!! CCAGCACTGACGGAAGGTGG+TGG + chr4.2:64058905-64058924 None:intergenic 65.0%
!! GGTGGAGGAGGTGATGGTGG+TGG - chr4.2:64056577-64056596 MS.gene71259:CDS 65.0%
GGCAGTGGAAGCGGTGGAGG+AGG - chr4.2:64056565-64056584 MS.gene71259:CDS 70.0%
GGTGGCAGTGGAAGCGGTGG+AGG - chr4.2:64056562-64056581 MS.gene71259:CDS 70.0%
! GCATCCACCAACGGTGGCGG+CGG - chr4.2:64056526-64056545 MS.gene71259:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 64056340 64060489 64056340 ID=MS.gene71259
chr4.2 mRNA 64056340 64060489 64056340 ID=MS.gene71259.t1;Parent=MS.gene71259
chr4.2 exon 64059950 64060489 64059950 ID=MS.gene71259.t1.exon1;Parent=MS.gene71259.t1
chr4.2 CDS 64059950 64060489 64059950 ID=cds.MS.gene71259.t1;Parent=MS.gene71259.t1
chr4.2 exon 64058095 64058163 64058095 ID=MS.gene71259.t1.exon2;Parent=MS.gene71259.t1
chr4.2 CDS 64058095 64058163 64058095 ID=cds.MS.gene71259.t1;Parent=MS.gene71259.t1
chr4.2 exon 64057859 64057990 64057859 ID=MS.gene71259.t1.exon3;Parent=MS.gene71259.t1
chr4.2 CDS 64057859 64057990 64057859 ID=cds.MS.gene71259.t1;Parent=MS.gene71259.t1
chr4.2 exon 64057693 64057746 64057693 ID=MS.gene71259.t1.exon4;Parent=MS.gene71259.t1
chr4.2 CDS 64057693 64057746 64057693 ID=cds.MS.gene71259.t1;Parent=MS.gene71259.t1
chr4.2 exon 64057562 64057606 64057562 ID=MS.gene71259.t1.exon5;Parent=MS.gene71259.t1
chr4.2 CDS 64057562 64057606 64057562 ID=cds.MS.gene71259.t1;Parent=MS.gene71259.t1
chr4.2 exon 64056706 64056845 64056706 ID=MS.gene71259.t1.exon6;Parent=MS.gene71259.t1
chr4.2 CDS 64056706 64056845 64056706 ID=cds.MS.gene71259.t1;Parent=MS.gene71259.t1
chr4.2 exon 64056485 64056610 64056485 ID=MS.gene71259.t1.exon7;Parent=MS.gene71259.t1
chr4.2 CDS 64056485 64056610 64056485 ID=cds.MS.gene71259.t1;Parent=MS.gene71259.t1
chr4.2 exon 64056340 64056388 64056340 ID=MS.gene71259.t1.exon8;Parent=MS.gene71259.t1
chr4.2 CDS 64056340 64056388 64056340 ID=cds.MS.gene71259.t1;Parent=MS.gene71259.t1
Gene Sequence

>MS.gene71259

ATGGCCATGGCTTCTTCATCATCATTCTCCACCATCCACCCTCGTTCTTTCTCTCTCTCCACCCAAAACCACCACTCTTCTTCAACCTCTCTCCCACTCCCATCTCTCTCCATCATCTCCCGCCGTCGTCCACATTCTCATTCCAACAACCTCTTCACTCCCCGTCCTCCCATAACCGCCATTTATGCATCCACCAACGGTGGCGGCGGAATTGGAGAATCAGGTGGCAGTGGAAGCGGTGGAGGAGGTGATGGTGGTGGCGATGATGGTGAATCAGAGGATAGAGATCGAAACAGAGAAGAAGCGTTGCTGGTACTTACGGAAGTAGGTAAGTCATTGGAGAATTTGCCAGCGGATTTAGCCGAAGCGGTGAAAGCGGGACGAGTTCCGGGTTCGATTGTGAAGAGATTCTTTGAGCTGCAAAAATCAAGTGTGTTTCGATGGTTGCTTAATTTTGGTGGGTTTAGAGAAAGATTGCTTGCTGATGATTTGTTTCTTGCTAAGGTTGCTATGGAATGCGGTGTTGGCATCTTTACAAAGGTTAGTTTTTCATTTCATATTTATTTTGATTTTGTGTCTTTGTACCAATATAGTGCTACATGATTGATAGACATTTGTGATTTATTAATCATATATGAAAAAGAAAAGTTTACACATGAAAGCAAGGCAAGCGGGCAACAAGCTGTGTCAGTAACTCGTTGTTGGGCACAAAATTTGTCTTTGACTTTGTTAGACACTTTTAAATACATTATTCGTTTTTCAAAGTTCATTGACTTTACTCTATCAAATTTTACTCATATTAGTGATTTTGAGAGTCAGGGACCAAACTAGATAGTATTATTAAAGGTTAAATTGTAAGTGGTTAAATATAGAGACCAATTTGATAATAAGTGGTTAAATATATAGACCAATTTGACCGGTTAAAAAAGTCGGGAATCTGCTTGAAATATTTATAATCTCATAAACTTATTTGAGAGCGCCCTACAAAACCAAGGACTAATTTGGTTGTTCACTGACTTCACTCCTAGATCAGTTATATGTTTGCTTCGTTAATAGGTTTGCAATTAGACTTGTATTGCCAATGGCTCATACGCCCGTCTCCATCTACTCATGATAGACATGCCTAATTCTGACAGCAGAAGGAGGACTTGTGTTATGAATTGTCTTAAATATAGTACCTGCCAATGAGATAAAAACTAATGAAGATATAACTACATTGATAGCTTCTCCGTCATGTATTAAATGTCGATTAAGATTATGTACACTTTTTAATTAAACTATTGAGTATACTAATTTTTCTAATTTAATGAGCTTCTTTGATTTAAGTATCCCAATTAGTGTAGCTCCTAGGTAAACTGAAATATGGTGAATAAATATATTAAGAGAAAAAGGTAATTGGTTCTCTACTTCATTAGTTCTTTGTTTTTACAATAAATGTGTTAGTTATTCTTTATTTAGTTTCCCATAGGTTACCTTAGTTGGAGTGAATCTTATTCAAGGCGTGTCGAGCACTAAATGTGTGAGTCTAGTCTGTTTTGCTAGACCCAACCCCATTGGTATTGTTATTCTAAATGGACAAATAATAATGAGTCAGTCCCGTAAGTACAACTGAGTTGCTAGCTCGATGGACATTTGATAAGCTGGGGTGTTGGTTCGTACTGGCAATTGAATTTGGGTCCCTTGATTAAGGTATCGGACTCAAACCCTGTAGATGGATAAAACATGGTTGGGAGGGGAGACTCTACTAAAGGTGGCCAACTGACCATCCAAATTCTTCAGCAGAGATTAGTCTTTACAAATTTTGTTTTTATATCAGGTTGAATTATTGAAAATATATATAATTGGAACTTTTGTTTTATAATAGGAACTTTTGTTTTTAAACAATAGTATAATATATTATTGGGTCTTGATTCTTGAACGGGGAACATAGGATGGTAAAGGGAAAAATCATTTAACAAATATTATTTGGTAACAATGAAGTTTGTTAATGGTTACAGGAAAGTTTGAACACATGCAAAAAGAGCCAGTTTAGATAGAAACTCTGAAGAAGTACTTTGGAAAAAGAAATATTAGAAAAGAAAAAAACTGAGTTTTTTAACCAACAACTCCATTCCATCATAAACATATTTAAATTATAAGGACAGCTTATTTTAATAGAAAAGCTCCATTCAGCTACATGCCAATCTTTAGCAACTGAAGTCTTTGATACAATACATTATATTTTGGAACAAACCTGTTGCATCTAGAAAATTGTAGTTTTTTTTCTTGTTATCTATAGAATTTTCTCCATCATCCATTTGTAATGAATGTTGCGTTTACATTTCAGACTGCTGCGGAGTTGGAGAAGCGAAAAGAAAACTTTACTAAAGAGCTTGATTTTGTTTGTGCTGATGTGGTATGCTATATATTTTTGTTTATATATTAGTCTCATTGCAAGTCCCTTCCAAATTATCTTTTTTAATAATCATGTTTTTTATTATTTAATTTAATTATTAATAGGTAATGGCCATTGTAGCAGATTTTATGCTTGTGTGGCTTCCTGCTCCGACGGTTTCTCTACGACCACCACCTTCCGTCAGTGCTGGACTTATTGCTAAATTCTTCTTCGGCTGCCCTGAAAATGCTTTTCAGGTTAACAACGGAACTCTTAATCTGTTTTTGTTTATTTTACTTTTTCATGCTTGGATAGATATTGGCATGATGTTTTTGTGCGATTGTGTTTAACTTTGTCAACACTCAACAGGTGGCTTTGGCTGGAACGTCATATTCACTTATACAGAGAATAGGTGCTATTGTGGTATGTATTGCATATAAGAAATTCAGTTATTATTATATCATATATTTGAATTTGAATGTTTTAAGTCATAATCATCTCTTCTGCAGCGGAACGGAGCTAAGCTATTTGCAGTTGGGACTGGTGCATCACTGGTATTTAACATTCTAACATATACACTAGCTTTTAATTTCTTAGTGAACTAAATCCAGACCCTTAACAATGTCATTATGGTGTTCTTGTTATGAACTTCAAAACAAAAGAATTGGTGTTGTTTTTCTACGTGACACACTTTGACATCAATTAACCTTTCAACCGATGTAAAAACGTTGCATAGATTTTCAAAAATGTCACCGCGTTGCTTTCTCTATCAGTTGCAATATAACAGATGTAAAAAGTCGTTGATTCCATATTTTGCACTCATGTTCACAACTATATAGTAGGACTGTAGGGTAATGCAGTTTGTGTTAACCTTGTCGCTTTTTGTTGCTTTGGTATATGAGATTAAAAAATTGAATCTATATACCATATTCATTACATATATATTAAACTAAGATAATTAGACTAAGCAGTTTTCATGGTAACTAAAGATAGGAACATTGTCACCGCTTACTTTGGAAATTAGCTAGCTGCCTCTCTCTACTTCCCTATGAGTGCTGGAATCCAATTGATTGGAGAACATAAATTTTCATATGATTGTGTTTTTAAGATAATCTTCCTTTAAGGTCAAGTGATGCTTGTTCCCCTAAAATTCAGGCTTATGCTTAACTCGGGTGTCTTGGAGATCTATCTTGCCATGTAATAATTAGTATATAATCGTAGACTTGTAGTATATTCATCAATGAGGTGACTGCATGACTTGCCTTTTCAGATTGGTACTGGTGTAACAAACGCATTGATTAATGCGCGGAAGGTTGTTGATAAATCTTTTGCTGACGAGGCAGAGGAAGTACCGGTATTATCAACGAGTGTTGCCTATGGGGTTTACATGGCAGTATCTAGCAACTTAAGGTAATTTGATTCTGCAACCTCAATAATGCATAATAACTATAAAAAAGCTTCAAAATTAACTTTTTTGTAATTAAATTGTCTCTGATCTCTACCAGGTATCAAATTCTAGCTGGAATTATTGAACAACGGATTTTAGATCCTTTGCTGCACCAAAACAAGCTCATGTTAAGTGCAATCTGCTTTGCTGTTAGAACCGGAAACACTTTCTTGGGCTCGCTATTGTAAGATTATCGATTTAACCTTCATTTCTATATAATTTACTATATTTGCTTCTGTTCTATCCTCATTATTTGTTACATGAATCTTCGCATGAATAGGTGGGTGGATTATGCTCGCTGGGTTGGAGTCCAGAAGATAAGGGATTAA
Protein sequence

>MS.gene71259.t1

MAMASSSSFSTIHPRSFSLSTQNHHSSSTSLPLPSLSIISRRRPHSHSNNLFTPRPPITAIYASTNGGGGIGESGGSGSGGGGDGGGDDGESEDRDRNREEALLVLTEVGKSLENLPADLAEAVKAGRVPGSIVKRFFELQKSSVFRWLLNFGGFRERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFTKELDFVCADVVMAIVADFMLVWLPAPTVSLRPPPSVSAGLIAKFFFGCPENAFQVALAGTSYSLIQRIGAIVRNGAKLFAVGTGASLIGTGVTNALINARKVVDKSFADEAEEVPVLSTSVAYGVYMAVSSNLRYQILAGIIEQRILDPLLHQNKLMLSAICFAVRTGNTFLGSLLWVDYARWVGVQKIRD