Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76440.t1 | XP_024628986.1 | 99.6 | 231 | 1 | 0 | 1 | 231 | 1 | 231 | 1.70E-116 | 428.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76440.t1 | Q8LCV1 | 77.6 | 223 | 49 | 1 | 1 | 222 | 1 | 223 | 2.7e-94 | 346.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76440.t1 | I3SFU3 | 99.6 | 231 | 1 | 0 | 1 | 231 | 1 | 231 | 1.2e-116 | 428.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049756 | MS.gene76440 | 0.800949 | 1.13E-48 | -1.69E-46 |
| MS.gene050084 | MS.gene76440 | 0.810808 | 9.59E-51 | -1.69E-46 |
| MS.gene050085 | MS.gene76440 | 0.831831 | 1.34E-55 | -1.69E-46 |
| MS.gene050114 | MS.gene76440 | 0.824322 | 8.59E-54 | -1.69E-46 |
| MS.gene050277 | MS.gene76440 | 0.807028 | 6.17E-50 | -1.69E-46 |
| MS.gene050317 | MS.gene76440 | 0.825892 | 3.66E-54 | -1.69E-46 |
| MS.gene050320 | MS.gene76440 | 0.816673 | 4.90E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene76440 | 0.821128 | 4.76E-53 | -1.69E-46 |
| MS.gene050752 | MS.gene76440 | 0.821839 | 3.26E-53 | -1.69E-46 |
| MS.gene050838 | MS.gene76440 | 0.882891 | 7.12E-71 | -1.69E-46 |
| MS.gene050945 | MS.gene76440 | 0.811645 | 6.31E-51 | -1.69E-46 |
| MS.gene051003 | MS.gene76440 | 0.825523 | 4.48E-54 | -1.69E-46 |
| MS.gene051063 | MS.gene76440 | 0.818948 | 1.50E-52 | -1.69E-46 |
| MS.gene051233 | MS.gene76440 | 0.827268 | 1.72E-54 | -1.69E-46 |
| MS.gene051234 | MS.gene76440 | 0.821492 | 3.92E-53 | -1.69E-46 |
| MS.gene051343 | MS.gene76440 | 0.861521 | 9.68E-64 | -1.69E-46 |
| MS.gene051676 | MS.gene76440 | 0.836028 | 1.19E-56 | -1.69E-46 |
| MS.gene051700 | MS.gene76440 | 0.810089 | 1.37E-50 | -1.69E-46 |
| MS.gene051746 | MS.gene76440 | 0.836313 | 1.01E-56 | -1.69E-46 |
| MS.gene051748 | MS.gene76440 | 0.855123 | 7.79E-62 | -1.69E-46 |
| MS.gene051756 | MS.gene76440 | 0.829259 | 5.69E-55 | -1.69E-46 |
| MS.gene051885 | MS.gene76440 | 0.812365 | 4.40E-51 | -1.69E-46 |
| MS.gene05188 | MS.gene76440 | 0.812975 | 3.23E-51 | -1.69E-46 |
| MS.gene051902 | MS.gene76440 | 0.836137 | 1.12E-56 | -1.69E-46 |
| MS.gene051903 | MS.gene76440 | 0.847355 | 1.22E-59 | -1.69E-46 |
| MS.gene051975 | MS.gene76440 | 0.846996 | 1.53E-59 | -1.69E-46 |
| MS.gene052072 | MS.gene76440 | 0.843333 | 1.49E-58 | -1.69E-46 |
| MS.gene052242 | MS.gene76440 | -0.800137 | 1.66E-48 | -1.69E-46 |
| MS.gene052296 | MS.gene76440 | 0.822406 | 2.41E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene76440 | 0.813321 | 2.72E-51 | -1.69E-46 |
| MS.gene052818 | MS.gene76440 | -0.814806 | 1.28E-51 | -1.69E-46 |
| MS.gene052947 | MS.gene76440 | 0.845284 | 4.47E-59 | -1.69E-46 |
| MS.gene053058 | MS.gene76440 | 0.82563 | 4.22E-54 | -1.69E-46 |
| MS.gene053109 | MS.gene76440 | 0.834459 | 2.96E-56 | -1.69E-46 |
| MS.gene053167 | MS.gene76440 | 0.805821 | 1.11E-49 | -1.69E-46 |
| MS.gene053564 | MS.gene76440 | 0.819294 | 1.25E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene76440 | 0.81443 | 1.55E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene76440 | 0.844232 | 8.59E-59 | -1.69E-46 |
| MS.gene054403 | MS.gene76440 | 0.820854 | 5.51E-53 | -1.69E-46 |
| MS.gene05469 | MS.gene76440 | 0.821197 | 4.59E-53 | -1.69E-46 |
| MS.gene055311 | MS.gene76440 | 0.833363 | 5.57E-56 | -1.69E-46 |
| MS.gene055313 | MS.gene76440 | 0.820783 | 5.71E-53 | -1.69E-46 |
| MS.gene055314 | MS.gene76440 | 0.836346 | 9.87E-57 | -1.69E-46 |
| MS.gene055424 | MS.gene76440 | 0.84695 | 1.57E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene76440 | 0.817606 | 3.02E-52 | -1.69E-46 |
| MS.gene056075 | MS.gene76440 | 0.808775 | 2.62E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene76440 | 0.820257 | 7.55E-53 | -1.69E-46 |
| MS.gene056403 | MS.gene76440 | 0.805857 | 1.09E-49 | -1.69E-46 |
| MS.gene056580 | MS.gene76440 | 0.819059 | 1.42E-52 | -1.69E-46 |
| MS.gene056605 | MS.gene76440 | 0.803396 | 3.56E-49 | -1.69E-46 |
| MS.gene056631 | MS.gene76440 | 0.806585 | 7.66E-50 | -1.69E-46 |
| MS.gene056752 | MS.gene76440 | 0.817058 | 4.01E-52 | -1.69E-46 |
| MS.gene056787 | MS.gene76440 | 0.801748 | 7.78E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene76440 | 0.84736 | 1.21E-59 | -1.69E-46 |
| MS.gene057057 | MS.gene76440 | 0.805812 | 1.11E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene76440 | 0.890547 | 8.92E-74 | -1.69E-46 |
| MS.gene057234 | MS.gene76440 | 0.847951 | 8.35E-60 | -1.69E-46 |
| MS.gene057452 | MS.gene76440 | -0.827712 | 1.34E-54 | -1.69E-46 |
| MS.gene057705 | MS.gene76440 | 0.80328 | 3.76E-49 | -1.69E-46 |
| MS.gene05781 | MS.gene76440 | 0.80471 | 1.90E-49 | -1.69E-46 |
| MS.gene057890 | MS.gene76440 | -0.809652 | 1.70E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene76440 | 0.85149 | 8.58E-61 | -1.69E-46 |
| MS.gene058054 | MS.gene76440 | 0.831038 | 2.09E-55 | -1.69E-46 |
| MS.gene058055 | MS.gene76440 | 0.826031 | 3.39E-54 | -1.69E-46 |
| MS.gene058074 | MS.gene76440 | 0.86744 | 1.37E-65 | -1.69E-46 |
| MS.gene058238 | MS.gene76440 | 0.849996 | 2.26E-60 | -1.69E-46 |
| MS.gene058261 | MS.gene76440 | 0.806404 | 8.36E-50 | -1.69E-46 |
| MS.gene058638 | MS.gene76440 | 0.834068 | 3.71E-56 | -1.69E-46 |
| MS.gene058639 | MS.gene76440 | 0.84164 | 4.20E-58 | -1.69E-46 |
| MS.gene058654 | MS.gene76440 | 0.802448 | 5.58E-49 | -1.69E-46 |
| MS.gene058758 | MS.gene76440 | 0.801177 | 1.02E-48 | -1.69E-46 |
| MS.gene05880 | MS.gene76440 | 0.809357 | 1.97E-50 | -1.69E-46 |
| MS.gene058852 | MS.gene76440 | 0.830099 | 3.55E-55 | -1.69E-46 |
| MS.gene059146 | MS.gene76440 | 0.841403 | 4.85E-58 | -1.69E-46 |
| MS.gene059171 | MS.gene76440 | 0.876765 | 1.08E-68 | -1.69E-46 |
| MS.gene059227 | MS.gene76440 | 0.845029 | 5.24E-59 | -1.69E-46 |
| MS.gene059360 | MS.gene76440 | 0.806348 | 8.59E-50 | -1.69E-46 |
| MS.gene06001 | MS.gene76440 | 0.852558 | 4.27E-61 | -1.69E-46 |
| MS.gene06010 | MS.gene76440 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene06011 | MS.gene76440 | 0.847493 | 1.12E-59 | -1.69E-46 |
| MS.gene060463 | MS.gene76440 | 0.808132 | 3.60E-50 | -1.69E-46 |
| MS.gene060465 | MS.gene76440 | 0.818789 | 1.63E-52 | -1.69E-46 |
| MS.gene060763 | MS.gene76440 | 0.850326 | 1.83E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76440.t1 | MTR_8g076890 | 99.567 | 231 | 1 | 0 | 1 | 231 | 64 | 294 | 1.07e-169 | 469 |
| MS.gene76440.t1 | MTR_1g106955 | 40.838 | 191 | 110 | 3 | 42 | 231 | 25 | 213 | 5.76e-42 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76440.t1 | AT5G66410 | 76.957 | 230 | 52 | 1 | 1 | 229 | 1 | 230 | 1.39e-124 | 352 |
| MS.gene76440.t1 | AT3G50960 | 76.087 | 230 | 54 | 1 | 1 | 229 | 1 | 230 | 2.99e-122 | 347 |
| MS.gene76440.t1 | AT3G50960 | 76.087 | 230 | 54 | 1 | 1 | 229 | 1 | 230 | 2.99e-122 | 347 |
| MS.gene76440.t1 | AT2G18990 | 38.235 | 204 | 123 | 3 | 27 | 229 | 10 | 211 | 1.51e-42 | 143 |
| MS.gene76440.t1 | AT3G25580 | 38.725 | 204 | 121 | 4 | 27 | 229 | 10 | 210 | 1.54e-42 | 143 |
| MS.gene76440.t1 | AT3G25580 | 38.725 | 204 | 121 | 4 | 27 | 229 | 5 | 205 | 1.80e-42 | 143 |
Find 42 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGTTCTTTGTTGCAAAAT+TGG | 0.230492 | 8.1:+30826754 | MS.gene76440:CDS |
| AATATATGCTTTCAGGATAA+TGG | 0.300467 | 8.1:+30826517 | MS.gene76440:intron |
| TGCCTTGTGTCATACTGTTC+AGG | 0.310619 | 8.1:+30826789 | MS.gene76440:CDS |
| TTGGTAGGGTTTCAAGATCT+TGG | 0.323322 | 8.1:+30827114 | MS.gene76440:CDS |
| ATCAATATGCTTTGTTGAAA+GGG | 0.348912 | 8.1:-30826555 | None:intergenic |
| GGTAACTGAAGGGGATTTCT+TGG | 0.349950 | 8.1:+30826336 | MS.gene76440:CDS |
| ACTCTCACCAATCTCGCATT+TGG | 0.367540 | 8.1:+30822756 | MS.gene76440:CDS |
| TACGTTTCCAAATGCGAGAT+TGG | 0.375187 | 8.1:-30822763 | None:intergenic |
| AGAGTGGACTTTACAGCGTC+TGG | 0.392094 | 8.1:-30822738 | None:intergenic |
| GTTGCAGTAGATAGATTGGT+AGG | 0.401977 | 8.1:+30827099 | MS.gene76440:CDS |
| GATTTCTTGGGTGAAGTCAC+TGG | 0.418247 | 8.1:+30826349 | MS.gene76440:CDS |
| ATAGAGAGAAGCAGAGAAAC+GGG | 0.422467 | 8.1:+30826276 | MS.gene76440:intron |
| GATTTGTCATTTCTATCATA+AGG | 0.426365 | 8.1:+30826384 | MS.gene76440:CDS |
| GGTTGACCTTGATGATTTGA+TGG | 0.431419 | 8.1:+30823205 | MS.gene76440:CDS |
| TATCAATATGCTTTGTTGAA+AGG | 0.446459 | 8.1:-30826556 | None:intergenic |
| AGGAGTTGCAGTAGATAGAT+TGG | 0.446681 | 8.1:+30827095 | MS.gene76440:CDS |
| CAGAACCTCCAGTGCTCTTG+TGG | 0.459386 | 8.1:-30827154 | None:intergenic |
| GTAACTGAAGGGGATTTCTT+GGG | 0.475841 | 8.1:+30826337 | MS.gene76440:CDS |
| AAGCAGAGAAACGGGAGGCA+TGG | 0.484264 | 8.1:+30826284 | MS.gene76440:CDS |
| GTGATGTCAGGATCCTGAAT+TGG | 0.484812 | 8.1:+30825922 | MS.gene76440:intron |
| TATAGAGAGAAGCAGAGAAA+CGG | 0.485061 | 8.1:+30826275 | MS.gene76440:intron |
| ATATTGATACAAAGTTCATC+AGG | 0.487438 | 8.1:+30826570 | MS.gene76440:CDS |
| AGCTGCTCGTAATTATCAAA+AGG | 0.494712 | 8.1:+30822794 | MS.gene76440:CDS |
| TTGCAGTAGATAGATTGGTA+GGG | 0.514893 | 8.1:+30827100 | MS.gene76440:CDS |
| GGAATTGCTTAGTGAAGAGA+AGG | 0.536456 | 8.1:+30823154 | MS.gene76440:intron |
| GAGGTTCTGCTGATAAAGAA+AGG | 0.554204 | 8.1:+30827168 | MS.gene76440:CDS |
| GTTCATCAGGCTTGATGCAG+AGG | 0.554580 | 8.1:+30826583 | MS.gene76440:CDS |
| CGGGAGGCATGGAAGAAGAA+AGG | 0.566753 | 8.1:+30826295 | MS.gene76440:CDS |
| AGCAGCCGCTGAAGATCTAA+CGG | 0.588057 | 8.1:-30827333 | None:intergenic |
| AATTTAGAGAGGTAACTGAA+GGG | 0.589625 | 8.1:+30826326 | MS.gene76440:CDS |
| GAATTTAGAGAGGTAACTGA+AGG | 0.591103 | 8.1:+30826325 | MS.gene76440:CDS |
| AGGTCATGGTGAATTTAGAG+AGG | 0.594615 | 8.1:+30826315 | MS.gene76440:CDS |
| AAATGCGAGATTGGTGAGAG+TGG | 0.596237 | 8.1:-30822754 | None:intergenic |
| ATACATCCATCAAATCATCA+AGG | 0.601675 | 8.1:-30823211 | None:intergenic |
| ATTTAGAGAGGTAACTGAAG+GGG | 0.604140 | 8.1:+30826327 | MS.gene76440:CDS |
| GCATGGAAGAAGAAAGGTCA+TGG | 0.607111 | 8.1:+30826301 | MS.gene76440:CDS |
| GTAAAAGGGCATACTTGCAT+CGG | 0.607611 | 8.1:-30826414 | None:intergenic |
| CACCTGAACAGTATGACACA+AGG | 0.641883 | 8.1:-30826791 | None:intergenic |
| TAGATCCGTTAGATCTTCAG+CGG | 0.680937 | 8.1:+30827328 | MS.gene76440:CDS |
| ATCGAGTTCTATAAACGAGG+AGG | 0.682972 | 8.1:+30823184 | MS.gene76440:CDS |
| GAGAGAAGCAGAGAAACGGG+AGG | 0.684731 | 8.1:+30826279 | MS.gene76440:intron |
| ACAATCGAGTTCTATAAACG+AGG | 0.744786 | 8.1:+30823181 | MS.gene76440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATCAATTTAATTAACTA+GGG | + | chr8.1:30827054-30827073 | MS.gene76440:intron | 10.0% |
| !! | TTATATCAATTTAATTAACT+AGG | + | chr8.1:30827053-30827072 | MS.gene76440:intron | 10.0% |
| !!! | TTTAAAATTGAATTCTAATT+AGG | + | chr8.1:30823629-30823648 | MS.gene76440:intron | 10.0% |
| !!! | TTTTCTTCTATTTAATTTTT+TGG | + | chr8.1:30823992-30824011 | MS.gene76440:intron | 10.0% |
| !! | AAAGATTAAATATTCTCTTT+AGG | - | chr8.1:30826906-30826925 | None:intergenic | 15.0% |
| !! | AATAGAAACAAATATTAGAT+GGG | + | chr8.1:30824200-30824219 | MS.gene76440:intron | 15.0% |
| !! | ACTACATAAAATAATAAACA+TGG | - | chr8.1:30822887-30822906 | None:intergenic | 15.0% |
| !! | ATATTTGCATTAAAATCATA+TGG | - | chr8.1:30826679-30826698 | None:intergenic | 15.0% |
| !! | TTTAAATTCAGAAGTTAAAT+AGG | - | chr8.1:30823615-30823634 | None:intergenic | 15.0% |
| !!! | AGATATCATTTTTATTTAGA+AGG | - | chr8.1:30826939-30826958 | None:intergenic | 15.0% |
| !!! | ATATCATTTTTATTTAGAAG+GGG | - | chr8.1:30826937-30826956 | None:intergenic | 15.0% |
| !!! | GATATCATTTTTATTTAGAA+GGG | - | chr8.1:30826938-30826957 | None:intergenic | 15.0% |
| !!! | TTCTTTTGATAAATTTTCTA+CGG | + | chr8.1:30825320-30825339 | MS.gene76440:intron | 15.0% |
| !! | AAACCTTAAATCAGAATAAT+GGG | - | chr8.1:30825892-30825911 | None:intergenic | 20.0% |
| !! | AAATATAATCATGAATAACG+AGG | - | chr8.1:30826063-30826082 | None:intergenic | 20.0% |
| !! | AATTATGAGTGATTATGAAA+AGG | - | chr8.1:30822853-30822872 | None:intergenic | 20.0% |
| !! | ACATATGATTGTTAACAAAA+AGG | + | chr8.1:30823309-30823328 | MS.gene76440:intron | 20.0% |
| !! | AGGTATTCTATATATAAAAG+GGG | - | chr8.1:30826043-30826062 | None:intergenic | 20.0% |
| !! | ATTCAATGAACAATAGTAAA+AGG | - | chr8.1:30826432-30826451 | None:intergenic | 20.0% |
| !! | CAAAAATAAATGTGAAAGAT+TGG | + | chr8.1:30824771-30824790 | MS.gene76440:intron | 20.0% |
| !! | GAATAGAAACAAATATTAGA+TGG | + | chr8.1:30824199-30824218 | MS.gene76440:intron | 20.0% |
| !! | GTAGAAAATTTATCAAAAGA+AGG | - | chr8.1:30825321-30825340 | None:intergenic | 20.0% |
| !! | TAAACCTTAAATCAGAATAA+TGG | - | chr8.1:30825893-30825912 | None:intergenic | 20.0% |
| !! | TTCAATGAACAATAGTAAAA+GGG | - | chr8.1:30826431-30826450 | None:intergenic | 20.0% |
| !! | TTTCATAATCACTCATAATT+AGG | + | chr8.1:30822853-30822872 | MS.gene76440:intron | 20.0% |
| !!! | AAAATATATAAGGCATTCTT+GGG | - | chr8.1:30825806-30825825 | None:intergenic | 20.0% |
| !!! | ATTTTGTTGTATTTTCAACT+GGG | + | chr8.1:30825295-30825314 | MS.gene76440:intron | 20.0% |
| !!! | CTTTTACTTCTTGAATTTTT+CGG | + | chr8.1:30826825-30826844 | MS.gene76440:intron | 20.0% |
| !!! | GAGGTATTCTATATATAAAA+GGG | - | chr8.1:30826044-30826063 | None:intergenic | 20.0% |
| !!! | TAAAATATATAAGGCATTCT+TGG | - | chr8.1:30825807-30825826 | None:intergenic | 20.0% |
| !!! | TATTTTGTTGTATTTTCAAC+TGG | + | chr8.1:30825294-30825313 | MS.gene76440:intron | 20.0% |
| !!! | TCAGATTTAACATTTTTTCT+AGG | - | chr8.1:30824312-30824331 | None:intergenic | 20.0% |
| !!! | TCTTTTGATAAATTTTCTAC+GGG | + | chr8.1:30825321-30825340 | MS.gene76440:intron | 20.0% |
| !!! | TTGCTTCATTTTTTTTCATA+AGG | + | chr8.1:30824265-30824284 | MS.gene76440:intron | 20.0% |
| !!! | TTTGTATGAGTGTTATTTTA+TGG | + | chr8.1:30825708-30825727 | MS.gene76440:intron | 20.0% |
| ! | AAACTTTCAGTTTGCAATTA+AGG | - | chr8.1:30824507-30824526 | None:intergenic | 25.0% |
| ! | AAATAACACTCATACAAAAC+AGG | - | chr8.1:30825706-30825725 | None:intergenic | 25.0% |
| ! | AAATTCAGAAGTTAAATAGG+TGG | - | chr8.1:30823612-30823631 | None:intergenic | 25.0% |
| ! | AATATATGCTTTCAGGATAA+TGG | + | chr8.1:30826517-30826536 | MS.gene76440:intron | 25.0% |
| ! | ATACCCATTATTCTGATTTA+AGG | + | chr8.1:30825886-30825905 | MS.gene76440:intron | 25.0% |
| ! | ATATTGATACAAAGTTCATC+AGG | + | chr8.1:30826570-30826589 | MS.gene76440:CDS | 25.0% |
| ! | CAAAACAAAGTAAAGCAAAT+GGG | - | chr8.1:30823765-30823784 | None:intergenic | 25.0% |
| ! | CATATATTGATACAACACAA+AGG | - | chr8.1:30826505-30826524 | None:intergenic | 25.0% |
| ! | GCATAATCTATGATATTAGT+TGG | + | chr8.1:30823899-30823918 | MS.gene76440:intron | 25.0% |
| ! | TTCTATTTAGCTATGCATTT+AGG | + | chr8.1:30824084-30824103 | MS.gene76440:intron | 25.0% |
| ! | TTGTATCAATATATGCTTTC+AGG | + | chr8.1:30826510-30826529 | MS.gene76440:intron | 25.0% |
| !! | ATCAATATGCTTTGTTGAAA+GGG | - | chr8.1:30826558-30826577 | None:intergenic | 25.0% |
| !! | ATGTATGTTTGCTAGTATTT+AGG | + | chr8.1:30823263-30823282 | MS.gene76440:intron | 25.0% |
| !! | CAAACAAATTCTAAGAAACA+TGG | - | chr8.1:30823585-30823604 | None:intergenic | 25.0% |
| !! | CGAGGTATTCTATATATAAA+AGG | - | chr8.1:30826045-30826064 | None:intergenic | 25.0% |
| !! | GATTTGTCATTTCTATCATA+AGG | + | chr8.1:30826384-30826403 | MS.gene76440:CDS | 25.0% |
| !! | TATCAATATGCTTTGTTGAA+AGG | - | chr8.1:30826559-30826578 | None:intergenic | 25.0% |
| !!! | AAAATGTTATTTCATCGATC+TGG | + | chr8.1:30825083-30825102 | MS.gene76440:intron | 25.0% |
| !!! | GAAAGTTTAACTTGTAAATG+TGG | + | chr8.1:30824519-30824538 | MS.gene76440:intron | 25.0% |
| !!! | TGAGTGTTATTTTATGGAAA+AGG | + | chr8.1:30825381-30825400 | MS.gene76440:intron | 25.0% |
| !!! | TTTGTGTGAGTGTTATTTTA+TGG | + | chr8.1:30825375-30825394 | MS.gene76440:intron | 25.0% |
| !!! | TTTTTGTTTATTCTCACATG+AGG | - | chr8.1:30824757-30824776 | None:intergenic | 25.0% |
| !!! | TTTTTTAACTGTCATTTGAC+AGG | + | chr8.1:30827245-30827264 | MS.gene76440:intron | 25.0% |
| AAATAACACTCACACAAAAC+AGG | - | chr8.1:30825373-30825392 | None:intergenic | 30.0% | |
| AAGTCTAAAAAACAGATGAG+TGG | + | chr8.1:30826870-30826889 | MS.gene76440:intron | 30.0% | |
| AATTTAGAGAGGTAACTGAA+GGG | + | chr8.1:30826326-30826345 | MS.gene76440:CDS | 30.0% | |
| ACCATGCCTATATAAGTTAT+AGG | - | chr8.1:30823674-30823693 | None:intergenic | 30.0% | |
| ACCTATAACTTATATAGGCA+TGG | + | chr8.1:30823670-30823689 | MS.gene76440:intron | 30.0% | |
| ACGAAGATTTGTGATGAAAT+GGG | + | chr8.1:30824345-30824364 | MS.gene76440:intron | 30.0% | |
| AGACACACTAACAAATGAAA+AGG | - | chr8.1:30827218-30827237 | None:intergenic | 30.0% | |
| AGGATTAATCAACTAGACAT+GGG | - | chr8.1:30824292-30824311 | None:intergenic | 30.0% | |
| ATACATCCATCAAATCATCA+AGG | - | chr8.1:30823214-30823233 | None:intergenic | 30.0% | |
| ATATGAATCATGATCTCTGT+AGG | + | chr8.1:30823133-30823152 | MS.gene76440:intron | 30.0% | |
| ATGATAGTCTATTCATCCTT+CGG | + | chr8.1:30824030-30824049 | MS.gene76440:intron | 30.0% | |
| ATGCCTATATAAGTTATAGG+TGG | - | chr8.1:30823671-30823690 | None:intergenic | 30.0% | |
| CACTAACAAATGAAAAGGAA+TGG | - | chr8.1:30827213-30827232 | None:intergenic | 30.0% | |
| CAGTAATCACAAATTGGAAA+AGG | - | chr8.1:30823956-30823975 | None:intergenic | 30.0% | |
| CTATGCATTTAGGAATGATA+TGG | + | chr8.1:30824094-30824113 | MS.gene76440:intron | 30.0% | |
| CTTCCACCTATAACTTATAT+AGG | + | chr8.1:30823665-30823684 | MS.gene76440:intron | 30.0% | |
| GAAACAAATATTAGATGGGT+CGG | + | chr8.1:30824204-30824223 | MS.gene76440:intron | 30.0% | |
| GAACAGAAACATCACAAAAA+AGG | + | chr8.1:30824708-30824727 | MS.gene76440:intron | 30.0% | |
| GAATTATTATGCATTGTGTG+TGG | + | chr8.1:30825055-30825074 | MS.gene76440:intron | 30.0% | |
| GCAAAACAAAGTAAAGCAAA+TGG | - | chr8.1:30823766-30823785 | None:intergenic | 30.0% | |
| GTGAATGAATGTCTTTCTTA+TGG | + | chr8.1:30824630-30824649 | MS.gene76440:intron | 30.0% | |
| TAACAAATGAAAAGGAATGG+AGG | - | chr8.1:30827210-30827229 | None:intergenic | 30.0% | |
| TACGAAGATTTGTGATGAAA+TGG | + | chr8.1:30824344-30824363 | MS.gene76440:intron | 30.0% | |
| TAGGATTAATCAACTAGACA+TGG | - | chr8.1:30824293-30824312 | None:intergenic | 30.0% | |
| TGCAATTAAGGTGATTTCAA+TGG | - | chr8.1:30824495-30824514 | None:intergenic | 30.0% | |
| TTATGTACAATTGTGATGTC+AGG | + | chr8.1:30825910-30825929 | MS.gene76440:intron | 30.0% | |
| ! | AAAACGCTGCTTGTTAAATA+AGG | + | chr8.1:30827016-30827035 | MS.gene76440:intron | 30.0% |
| ! | AATTGTTACTTCACATGTCA+AGG | - | chr8.1:30826473-30826492 | None:intergenic | 30.0% |
| ! | ATTGTTACTTCACATGTCAA+GGG | - | chr8.1:30826472-30826491 | None:intergenic | 30.0% |
| ! | CAAGGAAATTCAAATGCTTT+TGG | + | chr8.1:30823533-30823552 | MS.gene76440:intron | 30.0% |
| ! | GTGTATTTCTACATAGATGT+AGG | + | chr8.1:30824946-30824965 | MS.gene76440:intron | 30.0% |
| ! | TTTGATACGTTTTCTTTGCA+AGG | + | chr8.1:30823515-30823534 | MS.gene76440:intron | 30.0% |
| !! | AGTTTAACTTGTAAATGTGG+CGG | + | chr8.1:30824522-30824541 | MS.gene76440:intron | 30.0% |
| !! | TTTTCATTTGTTAGTGTGTC+TGG | + | chr8.1:30827217-30827236 | MS.gene76440:intron | 30.0% |
| !!! | AGGTTTTGAATTCACCATTA+CGG | + | chr8.1:30824966-30824985 | MS.gene76440:intron | 30.0% |
| !!! | ATGCACCTTTTAGTTTGTTT+CGG | + | chr8.1:30825583-30825602 | MS.gene76440:intron | 30.0% |
| !!! | TTCATCCACATCTTTTTTCT+CGG | - | chr8.1:30827279-30827298 | None:intergenic | 30.0% |
| AAAGAAAAATTAGTGCCCCT+GGG | - | chr8.1:30826247-30826266 | None:intergenic | 35.0% | |
| AAAGGTCAGATGTGTAAAAG+TGG | - | chr8.1:30823860-30823879 | None:intergenic | 35.0% | |
| AAAGTGATTCAAGACTTCCA+AGG | - | chr8.1:30823818-30823837 | None:intergenic | 35.0% | |
| ACAATCGAGTTCTATAAACG+AGG | + | chr8.1:30823181-30823200 | MS.gene76440:CDS | 35.0% | |
| ACAATTCCCTTTGTAGTCAA+CGG | - | chr8.1:30823724-30823743 | None:intergenic | 35.0% | |
| ACCGTTCTTTGTTGCAAAAT+TGG | + | chr8.1:30826754-30826773 | MS.gene76440:CDS | 35.0% | |
| AGAATTTCCCAACAAGACAA+AGG | - | chr8.1:30824148-30824167 | None:intergenic | 35.0% | |
| AGCTGCTCGTAATTATCAAA+AGG | + | chr8.1:30822794-30822813 | MS.gene76440:CDS | 35.0% | |
| ATCGACACTTGCATATACAA+AGG | - | chr8.1:30823451-30823470 | None:intergenic | 35.0% | |
| ATGATGCATCCTTGTATGTA+TGG | - | chr8.1:30825993-30826012 | None:intergenic | 35.0% | |
| ATGTCTTTCTTATGGAAGCA+TGG | + | chr8.1:30824638-30824657 | MS.gene76440:intron | 35.0% | |
| ATTAATTGCCTGCACACAAA+AGG | - | chr8.1:30823878-30823897 | None:intergenic | 35.0% | |
| ATTTAGAGAGGTAACTGAAG+GGG | + | chr8.1:30826327-30826346 | MS.gene76440:CDS | 35.0% | |
| CTACAATGGCAATTACAATG+GGG | - | chr8.1:30825470-30825489 | None:intergenic | 35.0% | |
| CTGTGATTGACAACATTGAT+TGG | + | chr8.1:30823045-30823064 | MS.gene76440:intron | 35.0% | |
| GAAATACTAGAAGGTCTCAT+TGG | + | chr8.1:30823481-30823500 | MS.gene76440:intron | 35.0% | |
| GAATTTAGAGAGGTAACTGA+AGG | + | chr8.1:30826325-30826344 | MS.gene76440:CDS | 35.0% | |
| GCAACATGCTGAAAAATGAA+AGG | + | chr8.1:30824909-30824928 | MS.gene76440:intron | 35.0% | |
| GCTACAATGGCAATTACAAT+GGG | - | chr8.1:30825471-30825490 | None:intergenic | 35.0% | |
| TAGAAATACACGCTGACATA+TGG | - | chr8.1:30824937-30824956 | None:intergenic | 35.0% | |
| TATAGAGAGAAGCAGAGAAA+CGG | + | chr8.1:30826275-30826294 | MS.gene76440:intron | 35.0% | |
| TATTGCCGAGAAAAAAGATG+TGG | + | chr8.1:30827271-30827290 | MS.gene76440:CDS | 35.0% | |
| TATTGCTAACTAGTGCCTTT+GGG | + | chr8.1:30826098-30826117 | MS.gene76440:intron | 35.0% | |
| TCACAGATTGCAGAAAATAG+TGG | - | chr8.1:30823031-30823050 | None:intergenic | 35.0% | |
| TCACCATTACGGAAAGATTT+GGG | + | chr8.1:30824977-30824996 | MS.gene76440:intron | 35.0% | |
| TGATAGTCTATTCATCCTTC+GGG | + | chr8.1:30824031-30824050 | MS.gene76440:intron | 35.0% | |
| TGCTACAATGGCAATTACAA+TGG | - | chr8.1:30825472-30825491 | None:intergenic | 35.0% | |
| TTCAAACACATTAACGCGAA+GGG | - | chr8.1:30824606-30824625 | None:intergenic | 35.0% | |
| TTCACCATTACGGAAAGATT+TGG | + | chr8.1:30824976-30824995 | MS.gene76440:intron | 35.0% | |
| TTCATCGATCTGGTAATCAT+GGG | + | chr8.1:30825093-30825112 | MS.gene76440:intron | 35.0% | |
| TTGCAGTAGATAGATTGGTA+GGG | + | chr8.1:30827100-30827119 | MS.gene76440:CDS | 35.0% | |
| TTTCATCGATCTGGTAATCA+TGG | + | chr8.1:30825092-30825111 | MS.gene76440:intron | 35.0% | |
| ! | GCATGCAATTTTTCCAATTC+AGG | - | chr8.1:30825938-30825957 | None:intergenic | 35.0% |
| ! | GCCAATTTTGCAACAAAGAA+CGG | - | chr8.1:30826758-30826777 | None:intergenic | 35.0% |
| ! | TAATTGTTGCTTCATGGTAG+TGG | + | chr8.1:30826977-30826996 | MS.gene76440:intron | 35.0% |
| ! | TGAAGCTAATTGTTGCTTCA+TGG | + | chr8.1:30826971-30826990 | MS.gene76440:intron | 35.0% |
| ! | TTTGTGTAAAGAGGTGTATG+TGG | + | chr8.1:30825028-30825047 | MS.gene76440:intron | 35.0% |
| !! | AAGTAAAGCAAATGGGCTAT+CGG | - | chr8.1:30823758-30823777 | None:intergenic | 35.0% |
| !! | AGACTATGATAGAAGTACTG+AGG | + | chr8.1:30823424-30823443 | MS.gene76440:intron | 35.0% |
| !! | GTTTAACTTGTAAATGTGGC+GGG | + | chr8.1:30824523-30824542 | MS.gene76440:intron | 35.0% |
| !! | TCAATGGATTATAGCTCTGT+GGG | - | chr8.1:30824479-30824498 | None:intergenic | 35.0% |
| !! | TTCAATGGATTATAGCTCTG+TGG | - | chr8.1:30824480-30824499 | None:intergenic | 35.0% |
| !! | TTGTATATGCAAGTGTCGAT+TGG | + | chr8.1:30823451-30823470 | MS.gene76440:intron | 35.0% |
| !!! | ATTTTGACTGTTTCTGCCAA+CGG | - | chr8.1:30824566-30824585 | None:intergenic | 35.0% |
| !!! | GGTGTTTCTTTTTTCAGACA+AGG | + | chr8.1:30827075-30827094 | MS.gene76440:intron | 35.0% |
| !!! | TTTTTTAACTAGTGCCCCAA+AGG | - | chr8.1:30826116-30826135 | None:intergenic | 35.0% |
| AAGAAAAATTAGTGCCCCTG+GGG | - | chr8.1:30826246-30826265 | None:intergenic | 40.0% | |
| ACTAGAAGGTCTCATTGGTA+TGG | + | chr8.1:30823486-30823505 | MS.gene76440:intron | 40.0% | |
| AGCCATGTGTTTGTGTAAAG+AGG | + | chr8.1:30825019-30825038 | MS.gene76440:intron | 40.0% | |
| AGGAGTTGCAGTAGATAGAT+TGG | + | chr8.1:30827095-30827114 | MS.gene76440:CDS | 40.0% | |
| AGGTCATGGTGAATTTAGAG+AGG | + | chr8.1:30826315-30826334 | MS.gene76440:CDS | 40.0% | |
| ATACAAAACAGGCTTCGAGT+TGG | - | chr8.1:30825695-30825714 | None:intergenic | 40.0% | |
| ATAGAGAGAAGCAGAGAAAC+GGG | + | chr8.1:30826276-30826295 | MS.gene76440:intron | 40.0% | |
| ATCGAGTTCTATAAACGAGG+AGG | + | chr8.1:30823184-30823203 | MS.gene76440:CDS | 40.0% | |
| ATGCATCCTTGTATGTATGG+AGG | - | chr8.1:30825990-30826009 | None:intergenic | 40.0% | |
| ATTGCTAACTAGTGCCTTTG+GGG | + | chr8.1:30826099-30826118 | MS.gene76440:intron | 40.0% | |
| ATTTCCCAACAAGACAAAGG+AGG | - | chr8.1:30824145-30824164 | None:intergenic | 40.0% | |
| CAAAGAAAAATTAGTGCCCC+TGG | - | chr8.1:30826248-30826267 | None:intergenic | 40.0% | |
| CACCTCTTTACACAAACACA+TGG | - | chr8.1:30825024-30825043 | None:intergenic | 40.0% | |
| CTATTGCTAACTAGTGCCTT+TGG | + | chr8.1:30826097-30826116 | MS.gene76440:intron | 40.0% | |
| CTTCAAACACATTAACGCGA+AGG | - | chr8.1:30824607-30824626 | None:intergenic | 40.0% | |
| GAGGTTCTGCTGATAAAGAA+AGG | + | chr8.1:30827168-30827187 | MS.gene76440:CDS | 40.0% | |
| GATAGTCTATTCATCCTTCG+GGG | + | chr8.1:30824032-30824051 | MS.gene76440:intron | 40.0% | |
| GCACTGCAGTAATCACAAAT+TGG | - | chr8.1:30823962-30823981 | None:intergenic | 40.0% | |
| GGAATTGCTTAGTGAAGAGA+AGG | + | chr8.1:30823154-30823173 | MS.gene76440:intron | 40.0% | |
| GGTTGACTGGAAATACTAGA+AGG | + | chr8.1:30823472-30823491 | MS.gene76440:intron | 40.0% | |
| GTAAAAGTGGCTTATGATGC+AGG | - | chr8.1:30823847-30823866 | None:intergenic | 40.0% | |
| GTAACTGAAGGGGATTTCTT+GGG | + | chr8.1:30826337-30826356 | MS.gene76440:CDS | 40.0% | |
| GTTGCAGTAGATAGATTGGT+AGG | + | chr8.1:30827099-30827118 | MS.gene76440:CDS | 40.0% | |
| TACACAGTTCTCTTGCAGAA+AGG | - | chr8.1:30824849-30824868 | None:intergenic | 40.0% | |
| TACAGGCTGCAAACTACAAA+TGG | - | chr8.1:30823790-30823809 | None:intergenic | 40.0% | |
| TACGGAAAGATTTGGGAGAA+GGG | + | chr8.1:30824984-30825003 | MS.gene76440:intron | 40.0% | |
| TACGTTTCCAAATGCGAGAT+TGG | - | chr8.1:30822766-30822785 | None:intergenic | 40.0% | |
| TAGATCCGTTAGATCTTCAG+CGG | + | chr8.1:30827328-30827347 | MS.gene76440:CDS | 40.0% | |
| TAGTGACCTCCATACATACA+AGG | + | chr8.1:30825981-30826000 | MS.gene76440:intron | 40.0% | |
| TCATCGATCTGGTAATCATG+GGG | + | chr8.1:30825094-30825113 | MS.gene76440:intron | 40.0% | |
| TCTCCCAAATCTTTCCGTAA+TGG | - | chr8.1:30824983-30825002 | None:intergenic | 40.0% | |
| TGGAAAAATTGCATGCAGAC+AGG | + | chr8.1:30825942-30825961 | MS.gene76440:CDS | 40.0% | |
| TTACGGAAAGATTTGGGAGA+AGG | + | chr8.1:30824983-30825002 | MS.gene76440:intron | 40.0% | |
| TTACTTCACATGTCAAGGGA+TGG | - | chr8.1:30826468-30826487 | None:intergenic | 40.0% | |
| TTGGTAGGGTTTCAAGATCT+TGG | + | chr8.1:30827114-30827133 | MS.gene76440:CDS | 40.0% | |
| TTTCACTACACTACAACGCA+CGG | - | chr8.1:30822998-30823017 | None:intergenic | 40.0% | |
| TTTCCTTAACTAATGCCCCA+GGG | + | chr8.1:30826228-30826247 | MS.gene76440:intron | 40.0% | |
| ! | AGACAGGATTGCAGCTTTTA+AGG | + | chr8.1:30825958-30825977 | MS.gene76440:CDS | 40.0% |
| ! | GAAACATGGTCTTCTGAAGA+AGG | - | chr8.1:30823571-30823590 | None:intergenic | 40.0% |
| ! | GAAGTGTTTGACAGGAAGAT+GGG | - | chr8.1:30824666-30824685 | None:intergenic | 40.0% |
| ! | GGTTGACCTTGATGATTTGA+TGG | + | chr8.1:30823205-30823224 | MS.gene76440:CDS | 40.0% |
| ! | GTAAAAGGGCATACTTGCAT+CGG | - | chr8.1:30826417-30826436 | None:intergenic | 40.0% |
| ! | TTTGGAGTGTGTTTCTCTCA+AGG | + | chr8.1:30825197-30825216 | MS.gene76440:intron | 40.0% |
| !! | AGAAGTGTTTGACAGGAAGA+TGG | - | chr8.1:30824667-30824686 | None:intergenic | 40.0% |
| !! | GAGATTGAGAAGTGTTTGAC+AGG | - | chr8.1:30824674-30824693 | None:intergenic | 40.0% |
| !! | TAGGTGGAAGCATTAGTTTG+TGG | - | chr8.1:30823655-30823674 | None:intergenic | 40.0% |
| !!! | AGCAGCGTTTTATTTTAGCC+AGG | - | chr8.1:30827007-30827026 | None:intergenic | 40.0% |
| !!! | TTTTGACTGTTTCTGCCAAC+GGG | - | chr8.1:30824565-30824584 | None:intergenic | 40.0% |
| AAATGCGAGATTGGTGAGAG+TGG | - | chr8.1:30822757-30822776 | None:intergenic | 45.0% | |
| AACCATTCATCAGCTGCTCT+AGG | + | chr8.1:30824406-30824425 | MS.gene76440:intron | 45.0% | |
| ACCTTCCTCCAGTATATCAC+TGG | + | chr8.1:30825540-30825559 | MS.gene76440:intron | 45.0% | |
| ACTCTCACCAATCTCGCATT+TGG | + | chr8.1:30822756-30822775 | MS.gene76440:CDS | 45.0% | |
| AGAGAGAACAATCCGAACTG+AGG | + | chr8.1:30825407-30825426 | MS.gene76440:intron | 45.0% | |
| AGTCAACGGCACAAGTAATG+TGG | - | chr8.1:30823710-30823729 | None:intergenic | 45.0% | |
| AGTGATATACTGGAGGAAGG+TGG | - | chr8.1:30825541-30825560 | None:intergenic | 45.0% | |
| ATTAGATGGGTCGGCATGTA+AGG | + | chr8.1:30824213-30824232 | MS.gene76440:intron | 45.0% | |
| CACCTGAACAGTATGACACA+AGG | - | chr8.1:30826794-30826813 | None:intergenic | 45.0% | |
| CACTCACACAAAACAGGCTT+TGG | - | chr8.1:30825367-30825386 | None:intergenic | 45.0% | |
| CAGTTCGGATTGTTCTCTCT+GGG | - | chr8.1:30825407-30825426 | None:intergenic | 45.0% | |
| CGGCTCCGAAACAAACTAAA+AGG | - | chr8.1:30825591-30825610 | None:intergenic | 45.0% | |
| GATTTCTTGGGTGAAGTCAC+TGG | + | chr8.1:30826349-30826368 | MS.gene76440:CDS | 45.0% | |
| GCATGGAAGAAGAAAGGTCA+TGG | + | chr8.1:30826301-30826320 | MS.gene76440:CDS | 45.0% | |
| GCATGTTGCTGCATTTCTTC+AGG | - | chr8.1:30824898-30824917 | None:intergenic | 45.0% | |
| GGTAACTGAAGGGGATTTCT+TGG | + | chr8.1:30826336-30826355 | MS.gene76440:CDS | 45.0% | |
| GTGATATACTGGAGGAAGGT+GGG | - | chr8.1:30825540-30825559 | None:intergenic | 45.0% | |
| GTGATGTCAGGATCCTGAAT+TGG | + | chr8.1:30825922-30825941 | MS.gene76440:intron | 45.0% | |
| GTTTCCTTAACTAATGCCCC+AGG | + | chr8.1:30826227-30826246 | MS.gene76440:intron | 45.0% | |
| TCAGTTCGGATTGTTCTCTC+TGG | - | chr8.1:30825408-30825427 | None:intergenic | 45.0% | |
| TGATATACTGGAGGAAGGTG+GGG | - | chr8.1:30825539-30825558 | None:intergenic | 45.0% | |
| TGCCTTGTGTCATACTGTTC+AGG | + | chr8.1:30826789-30826808 | MS.gene76440:CDS | 45.0% | |
| TGCCTTTCTGTAGACAGAAC+AGG | + | chr8.1:30824872-30824891 | MS.gene76440:intron | 45.0% | |
| TGTGTCATACTGTTCAGGTG+AGG | + | chr8.1:30826794-30826813 | MS.gene76440:intron | 45.0% | |
| TTAGATGGGTCGGCATGTAA+GGG | + | chr8.1:30824214-30824233 | MS.gene76440:intron | 45.0% | |
| TTCCTTAACTAATGCCCCAG+GGG | + | chr8.1:30826229-30826248 | MS.gene76440:intron | 45.0% | |
| TTTGGGAGAAGGGAATACTC+TGG | + | chr8.1:30824994-30825013 | MS.gene76440:intron | 45.0% | |
| ! | ACATCTGACCTTTTGTGTGC+AGG | + | chr8.1:30823867-30823886 | MS.gene76440:intron | 45.0% |
| ! | ACTTGTGCCGTTGACTACAA+AGG | + | chr8.1:30823714-30823733 | MS.gene76440:intron | 45.0% |
| ! | AGACTTCCAAGGAAGTGTAC+AGG | - | chr8.1:30823807-30823826 | None:intergenic | 45.0% |
| ! | ATAGCTCTGTGGGTCACAAA+AGG | - | chr8.1:30824469-30824488 | None:intergenic | 45.0% |
| ! | CAGTCCTCCTTTGTCTTGTT+GGG | + | chr8.1:30824138-30824157 | MS.gene76440:intron | 45.0% |
| ! | CTTGTGCCGTTGACTACAAA+GGG | + | chr8.1:30823715-30823734 | MS.gene76440:intron | 45.0% |
| ! | TGTTTCGGAGCCGTTTGTTT+TGG | + | chr8.1:30825598-30825617 | MS.gene76440:intron | 45.0% |
| !! | CGATTTTTCCACAAGAGCAC+TGG | + | chr8.1:30827146-30827165 | MS.gene76440:CDS | 45.0% |
| !! | TTTGACTGTTTCTGCCAACG+GGG | - | chr8.1:30824564-30824583 | None:intergenic | 45.0% |
| !!! | TTTTTCCACAAGAGCACTGG+AGG | + | chr8.1:30827149-30827168 | MS.gene76440:CDS | 45.0% |
| !! | AATACAATATAAAATATATA+AGG | - | chr8.1:30825816-30825835 | None:intergenic | 5.0% |
| !!! | AAAAAAAGAAAATTTTATAT+TGG | + | chr8.1:30826139-30826158 | MS.gene76440:intron | 5.0% |
| AACCCTGTAACAATCCCCGT+TGG | + | chr8.1:30824547-30824566 | MS.gene76440:intron | 50.0% | |
| AGCAGCCGCTGAAGATCTAA+CGG | - | chr8.1:30827336-30827355 | None:intergenic | 50.0% | |
| AGGGTCTGCCAGTGATATAC+TGG | - | chr8.1:30825551-30825570 | None:intergenic | 50.0% | |
| CAAGTCCGCATGGCCTTTAT+GGG | - | chr8.1:30825509-30825528 | None:intergenic | 50.0% | |
| CACCTAGAGCAGCTGATGAA+TGG | - | chr8.1:30824411-30824430 | None:intergenic | 50.0% | |
| CCAACAAGACAAAGGAGGAC+TGG | - | chr8.1:30824140-30824159 | None:intergenic | 50.0% | |
| CCAGTCCTCCTTTGTCTTGT+TGG | + | chr8.1:30824137-30824156 | MS.gene76440:intron | 50.0% | |
| CCGAACTGAGGCAATCTTTC+CGG | + | chr8.1:30825419-30825438 | MS.gene76440:intron | 50.0% | |
| CCGGAAAGATTGCCTCAGTT+CGG | - | chr8.1:30825422-30825441 | None:intergenic | 50.0% | |
| GACTCTCCCAGTGCCAATTT+CGG | + | chr8.1:30825230-30825249 | MS.gene76440:intron | 50.0% | |
| GCCAGTGATATACTGGAGGA+AGG | - | chr8.1:30825544-30825563 | None:intergenic | 50.0% | |
| GGCAATTACAATGGGGAGCA+AGG | - | chr8.1:30825463-30825482 | None:intergenic | 50.0% | |
| GGCCTGTTCTGTCTACAGAA+AGG | - | chr8.1:30824877-30824896 | None:intergenic | 50.0% | |
| GTCGGCATGTAAGGGTAGAT+AGG | + | chr8.1:30824222-30824241 | MS.gene76440:intron | 50.0% | |
| GTCTGCCAGTGATATACTGG+AGG | - | chr8.1:30825548-30825567 | None:intergenic | 50.0% | |
| GTTCATCAGGCTTGATGCAG+AGG | + | chr8.1:30826583-30826602 | MS.gene76440:CDS | 50.0% | |
| TCAAGTCCGCATGGCCTTTA+TGG | - | chr8.1:30825510-30825529 | None:intergenic | 50.0% | |
| TGAACTCACTTGAGCTAGCC+TGG | + | chr8.1:30825157-30825176 | MS.gene76440:intron | 50.0% | |
| TGCCAACGGGGATTGTTACA+GGG | - | chr8.1:30824552-30824571 | None:intergenic | 50.0% | |
| TTCATCCTTCGGGGAGTAGT+AGG | + | chr8.1:30824041-30824060 | MS.gene76440:intron | 50.0% | |
| TTGCAGCCTGTACACTTCCT+TGG | + | chr8.1:30823798-30823817 | MS.gene76440:intron | 50.0% | |
| TTGCCATTGTAGCACGTGTG+TGG | + | chr8.1:30825478-30825497 | MS.gene76440:intron | 50.0% | |
| ! | AAACAGGCTTTGGCGCTATC+TGG | - | chr8.1:30825357-30825376 | None:intergenic | 50.0% |
| ! | AGAGTGGACTTTACAGCGTC+TGG | - | chr8.1:30822741-30822760 | None:intergenic | 50.0% |
| ! | CATTAACGCGAAGGGTGTGT+TGG | - | chr8.1:30824598-30824617 | None:intergenic | 50.0% |
| !! | CAAAACAGGCTTCGAGTTGG+CGG | - | chr8.1:30825692-30825711 | None:intergenic | 50.0% |
| !! | CTTCATGGTAGTGGTTAGCC+TGG | + | chr8.1:30826986-30827005 | MS.gene76440:intron | 50.0% |
| !! | GCAAGTGTCGATTGGTTGAC+TGG | + | chr8.1:30823459-30823478 | MS.gene76440:intron | 50.0% |
| !! | GTGGTGTTGGCTTAGGACTT+TGG | + | chr8.1:30825179-30825198 | MS.gene76440:intron | 50.0% |
| !!! | TTCGGAGCCGTTTGTTTTGG+CGG | + | chr8.1:30825601-30825620 | MS.gene76440:intron | 50.0% |
| AAGCAGAGAAACGGGAGGCA+TGG | + | chr8.1:30826284-30826303 | MS.gene76440:CDS | 55.0% | |
| AGCGCACCGAAATTGGCACT+GGG | - | chr8.1:30825239-30825258 | None:intergenic | 55.0% | |
| AGTCCTAAGCCAACACCACC+AGG | - | chr8.1:30825178-30825197 | None:intergenic | 55.0% | |
| CAATGGGGAGCAAGGCTGTA+AGG | - | chr8.1:30825455-30825474 | None:intergenic | 55.0% | |
| CAGAACCTCCAGTGCTCTTG+TGG | - | chr8.1:30827157-30827176 | None:intergenic | 55.0% | |
| CCAAACCAGCGCACCGAAAT+TGG | - | chr8.1:30825246-30825265 | None:intergenic | 55.0% | |
| CGGAGAAAGACTCGGCATTC+AGG | - | chr8.1:30825669-30825688 | None:intergenic | 55.0% | |
| CTGCCAACGGGGATTGTTAC+AGG | - | chr8.1:30824553-30824572 | None:intergenic | 55.0% | |
| GAGAGAAGCAGAGAAACGGG+AGG | + | chr8.1:30826279-30826298 | MS.gene76440:intron | 55.0% | |
| GGGATGACTTCAAGTCCGCA+TGG | - | chr8.1:30825519-30825538 | None:intergenic | 55.0% | |
| GTACGCCCCGCCAAAACAAA+CGG | - | chr8.1:30825611-30825630 | None:intergenic | 55.0% | |
| ! | ACTAGCCTACTACTCCCCGA+AGG | - | chr8.1:30824049-30824068 | None:intergenic | 55.0% |
| ! | ACTCACTTGAGCTAGCCTGG+TGG | + | chr8.1:30825160-30825179 | MS.gene76440:intron | 55.0% |
| ! | CGGGAGGCATGGAAGAAGAA+AGG | + | chr8.1:30826295-30826314 | MS.gene76440:CDS | 55.0% |
| ! | TGCCCCTGGGGCATTAGTTA+AGG | - | chr8.1:30826234-30826253 | None:intergenic | 55.0% |
| ! | TTGAGCTAGCCTGGTGGTGT+TGG | + | chr8.1:30825166-30825185 | MS.gene76440:intron | 55.0% |
| !! | CCAATTTCGGTGCGCTGGTT+TGG | + | chr8.1:30825243-30825262 | MS.gene76440:intron | 55.0% |
| !! | TAGCCTGGTGGTGTTGGCTT+AGG | + | chr8.1:30825172-30825191 | MS.gene76440:intron | 55.0% |
| !!! | TCGGAGCCGTTTGTTTTGGC+GGG | + | chr8.1:30825602-30825621 | MS.gene76440:intron | 55.0% |
| AGGTGCATGCTGCACTCACG+AGG | - | chr8.1:30825571-30825590 | None:intergenic | 60.0% | |
| CAGCGCACCGAAATTGGCAC+TGG | - | chr8.1:30825240-30825259 | None:intergenic | 60.0% | |
| CCACTACGTACCACACCACC+GGG | + | chr8.1:30825636-30825655 | MS.gene76440:intron | 60.0% | |
| CCCACTACGTACCACACCAC+CGG | + | chr8.1:30825635-30825654 | MS.gene76440:intron | 60.0% | |
| CCCAGCCCATAAAGGCCATG+CGG | + | chr8.1:30825501-30825520 | MS.gene76440:intron | 60.0% | |
| CCGCATGGCCTTTATGGGCT+GGG | - | chr8.1:30825504-30825523 | None:intergenic | 60.0% | |
| CCGGTGGTGTGGTACGTAGT+GGG | - | chr8.1:30825638-30825657 | None:intergenic | 60.0% | |
| GCTGTAAGGCGGAGCGAATC+CGG | - | chr8.1:30825441-30825460 | None:intergenic | 60.0% | |
| GGGCCACACACGTGCTACAA+TGG | - | chr8.1:30825484-30825503 | None:intergenic | 60.0% | |
| GGTGCATGCTGCACTCACGA+GGG | - | chr8.1:30825570-30825589 | None:intergenic | 60.0% | |
| GTGTGTGGCCCAGCCCATAA+AGG | + | chr8.1:30825493-30825512 | MS.gene76440:intron | 60.0% | |
| GTTGGCGGCGGAGAAAGACT+CGG | - | chr8.1:30825677-30825696 | None:intergenic | 60.0% | |
| TCCGCATGGCCTTTATGGGC+TGG | - | chr8.1:30825505-30825524 | None:intergenic | 60.0% | |
| TGGGGAGCAAGGCTGTAAGG+CGG | - | chr8.1:30825452-30825471 | None:intergenic | 60.0% | |
| ! | CAGTGCCAATTTCGGTGCGC+TGG | + | chr8.1:30825238-30825257 | MS.gene76440:intron | 60.0% |
| !! | AACAGGCTTCGAGTTGGCGG+CGG | - | chr8.1:30825689-30825708 | None:intergenic | 60.0% |
| !!! | CGGAGCCGTTTGTTTTGGCG+GGG | + | chr8.1:30825603-30825622 | MS.gene76440:intron | 60.0% |
| CCCGGTGGTGTGGTACGTAG+TGG | - | chr8.1:30825639-30825658 | None:intergenic | 65.0% | |
| CTACGTACCACACCACCGGG+CGG | + | chr8.1:30825639-30825658 | MS.gene76440:intron | 65.0% | |
| CATTCAGGCGAGCCGCCCGG+TGG | - | chr8.1:30825654-30825673 | None:intergenic | 75.0% | |
| CGGCATTCAGGCGAGCCGCC+CGG | - | chr8.1:30825657-30825676 | None:intergenic | 75.0% | |
| ! | AGGCGAGCCGCCCGGTGGTG+TGG | - | chr8.1:30825649-30825668 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 30822732 | 30827379 | 30822732 | ID=MS.gene76440 |
| chr8.1 | mRNA | 30822732 | 30827379 | 30822732 | ID=MS.gene76440.t1;Parent=MS.gene76440 |
| chr8.1 | exon | 30822732 | 30822815 | 30822732 | ID=MS.gene76440.t1.exon1;Parent=MS.gene76440.t1 |
| chr8.1 | CDS | 30822732 | 30822815 | 30822732 | ID=cds.MS.gene76440.t1;Parent=MS.gene76440.t1 |
| chr8.1 | exon | 30823155 | 30823229 | 30823155 | ID=MS.gene76440.t1.exon2;Parent=MS.gene76440.t1 |
| chr8.1 | CDS | 30823155 | 30823229 | 30823155 | ID=cds.MS.gene76440.t1;Parent=MS.gene76440.t1 |
| chr8.1 | exon | 30825932 | 30825979 | 30825932 | ID=MS.gene76440.t1.exon3;Parent=MS.gene76440.t1 |
| chr8.1 | CDS | 30825932 | 30825979 | 30825932 | ID=cds.MS.gene76440.t1;Parent=MS.gene76440.t1 |
| chr8.1 | exon | 30826280 | 30826422 | 30826280 | ID=MS.gene76440.t1.exon4;Parent=MS.gene76440.t1 |
| chr8.1 | CDS | 30826280 | 30826422 | 30826280 | ID=cds.MS.gene76440.t1;Parent=MS.gene76440.t1 |
| chr8.1 | exon | 30826532 | 30826604 | 30826532 | ID=MS.gene76440.t1.exon5;Parent=MS.gene76440.t1 |
| chr8.1 | CDS | 30826532 | 30826604 | 30826532 | ID=cds.MS.gene76440.t1;Parent=MS.gene76440.t1 |
| chr8.1 | exon | 30826749 | 30826810 | 30826749 | ID=MS.gene76440.t1.exon6;Parent=MS.gene76440.t1 |
| chr8.1 | CDS | 30826749 | 30826810 | 30826749 | ID=cds.MS.gene76440.t1;Parent=MS.gene76440.t1 |
| chr8.1 | exon | 30827092 | 30827189 | 30827092 | ID=MS.gene76440.t1.exon7;Parent=MS.gene76440.t1 |
| chr8.1 | CDS | 30827092 | 30827189 | 30827092 | ID=cds.MS.gene76440.t1;Parent=MS.gene76440.t1 |
| chr8.1 | exon | 30827267 | 30827379 | 30827267 | ID=MS.gene76440.t1.exon8;Parent=MS.gene76440.t1 |
| chr8.1 | CDS | 30827267 | 30827379 | 30827267 | ID=cds.MS.gene76440.t1;Parent=MS.gene76440.t1 |
| Gene Sequence |
| Protein sequence |
