Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79604.t1 | XP_003621182.2 | 85.9 | 775 | 63 | 5 | 21 | 779 | 1 | 745 | 0.00E+00 | 1144.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79604.t1 | Q2HVS4 | 85.9 | 775 | 63 | 5 | 21 | 779 | 1 | 745 | 0.0e+00 | 1144.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene79604 | 0.811143 | 8.11E-51 | -1.69E-46 |
| MS.gene049230 | MS.gene79604 | 0.801088 | 1.06E-48 | -1.69E-46 |
| MS.gene049254 | MS.gene79604 | 0.812304 | 4.53E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene79604 | 0.852247 | 5.23E-61 | -1.69E-46 |
| MS.gene049452 | MS.gene79604 | 0.805601 | 1.23E-49 | -1.69E-46 |
| MS.gene049647 | MS.gene79604 | 0.81594 | 7.15E-52 | -1.69E-46 |
| MS.gene049669 | MS.gene79604 | 0.825859 | 3.73E-54 | -1.69E-46 |
| MS.gene049801 | MS.gene79604 | 0.802075 | 6.66E-49 | -1.69E-46 |
| MS.gene050105 | MS.gene79604 | 0.825923 | 3.60E-54 | -1.69E-46 |
| MS.gene050226 | MS.gene79604 | 0.830204 | 3.35E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene79604 | 0.821857 | 3.23E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene79604 | 0.834963 | 2.21E-56 | -1.69E-46 |
| MS.gene050442 | MS.gene79604 | 0.841875 | 3.64E-58 | -1.69E-46 |
| MS.gene050605 | MS.gene79604 | 0.822033 | 2.94E-53 | -1.69E-46 |
| MS.gene050680 | MS.gene79604 | 0.808159 | 3.55E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene79604 | 0.816736 | 4.74E-52 | -1.69E-46 |
| MS.gene050826 | MS.gene79604 | 0.827638 | 1.40E-54 | -1.69E-46 |
| MS.gene050953 | MS.gene79604 | 0.809329 | 2.00E-50 | -1.69E-46 |
| MS.gene051122 | MS.gene79604 | 0.824834 | 6.51E-54 | -1.69E-46 |
| MS.gene051368 | MS.gene79604 | 0.827374 | 1.62E-54 | -1.69E-46 |
| MS.gene051452 | MS.gene79604 | 0.817669 | 2.93E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene79604 | 0.800147 | 1.65E-48 | -1.69E-46 |
| MS.gene052333 | MS.gene79604 | 0.837432 | 5.22E-57 | -1.69E-46 |
| MS.gene052389 | MS.gene79604 | 0.806958 | 6.39E-50 | -1.69E-46 |
| MS.gene052426 | MS.gene79604 | 0.827801 | 1.28E-54 | -1.69E-46 |
| MS.gene052586 | MS.gene79604 | 0.847103 | 1.43E-59 | -1.69E-46 |
| MS.gene052674 | MS.gene79604 | 0.864451 | 1.20E-64 | -1.69E-46 |
| MS.gene052675 | MS.gene79604 | 0.861159 | 1.25E-63 | -1.69E-46 |
| MS.gene052677 | MS.gene79604 | 0.861734 | 8.33E-64 | -1.69E-46 |
| MS.gene052954 | MS.gene79604 | 0.829532 | 4.88E-55 | -1.69E-46 |
| MS.gene053008 | MS.gene79604 | 0.802786 | 4.75E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene79604 | 0.85091 | 1.25E-60 | -1.69E-46 |
| MS.gene05415 | MS.gene79604 | 0.809101 | 2.23E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene79604 | 0.803393 | 3.56E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene79604 | -0.818205 | 2.21E-52 | -1.69E-46 |
| MS.gene054467 | MS.gene79604 | 0.81268 | 3.75E-51 | -1.69E-46 |
| MS.gene054468 | MS.gene79604 | 0.845317 | 4.38E-59 | -1.69E-46 |
| MS.gene054479 | MS.gene79604 | 0.846858 | 1.67E-59 | -1.69E-46 |
| MS.gene054559 | MS.gene79604 | 0.81441 | 1.56E-51 | -1.69E-46 |
| MS.gene054576 | MS.gene79604 | 0.81425 | 1.70E-51 | -1.69E-46 |
| MS.gene054657 | MS.gene79604 | 0.82215 | 2.76E-53 | -1.69E-46 |
| MS.gene054875 | MS.gene79604 | 0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene79604 | 0.800196 | 1.61E-48 | -1.69E-46 |
| MS.gene05510 | MS.gene79604 | 0.815328 | 9.78E-52 | -1.69E-46 |
| MS.gene055623 | MS.gene79604 | 0.812419 | 4.28E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene79604 | 0.897316 | 1.58E-76 | -1.69E-46 |
| MS.gene055926 | MS.gene79604 | 0.825096 | 5.65E-54 | -1.69E-46 |
| MS.gene05595 | MS.gene79604 | 0.802798 | 4.73E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene79604 | 0.804754 | 1.86E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene79604 | 0.816565 | 5.18E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene79604 | 0.858882 | 6.07E-63 | -1.69E-46 |
| MS.gene056779 | MS.gene79604 | 0.805408 | 1.35E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene79604 | 0.840514 | 8.31E-58 | -1.69E-46 |
| MS.gene057156 | MS.gene79604 | -0.845107 | 4.99E-59 | -1.69E-46 |
| MS.gene057208 | MS.gene79604 | 0.808927 | 2.43E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene79604 | 0.84813 | 7.46E-60 | -1.69E-46 |
| MS.gene058081 | MS.gene79604 | 0.821642 | 3.62E-53 | -1.69E-46 |
| MS.gene058146 | MS.gene79604 | 0.827634 | 1.40E-54 | -1.69E-46 |
| MS.gene058223 | MS.gene79604 | -0.820331 | 7.26E-53 | -1.69E-46 |
| MS.gene058548 | MS.gene79604 | 0.807341 | 5.30E-50 | -1.69E-46 |
| MS.gene058595 | MS.gene79604 | 0.841398 | 4.87E-58 | -1.69E-46 |
| MS.gene058979 | MS.gene79604 | 0.835542 | 1.58E-56 | -1.69E-46 |
| MS.gene059128 | MS.gene79604 | 0.80539 | 1.37E-49 | -1.69E-46 |
| MS.gene059161 | MS.gene79604 | 0.814306 | 1.65E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene79604 | 0.814627 | 1.40E-51 | -1.69E-46 |
| MS.gene059550 | MS.gene79604 | 0.805212 | 1.49E-49 | -1.69E-46 |
| MS.gene059609 | MS.gene79604 | 0.812167 | 4.86E-51 | -1.69E-46 |
| MS.gene05973 | MS.gene79604 | 0.824048 | 9.97E-54 | -1.69E-46 |
| MS.gene059952 | MS.gene79604 | 0.809171 | 2.16E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene79604 | 0.849298 | 3.54E-60 | -1.69E-46 |
| MS.gene060296 | MS.gene79604 | 0.814616 | 1.41E-51 | -1.69E-46 |
| MS.gene060310 | MS.gene79604 | 0.819294 | 1.25E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene79604 | 0.855421 | 6.38E-62 | -1.69E-46 |
| MS.gene06052 | MS.gene79604 | 0.837029 | 6.61E-57 | -1.69E-46 |
| MS.gene060572 | MS.gene79604 | 0.800327 | 1.52E-48 | -1.69E-46 |
| MS.gene060683 | MS.gene79604 | 0.830355 | 3.08E-55 | -1.69E-46 |
| MS.gene060685 | MS.gene79604 | 0.831521 | 1.59E-55 | -1.69E-46 |
| MS.gene060802 | MS.gene79604 | 0.843852 | 1.09E-58 | -1.69E-46 |
| MS.gene060850 | MS.gene79604 | 0.829581 | 4.75E-55 | -1.69E-46 |
| MS.gene060851 | MS.gene79604 | 0.831295 | 1.81E-55 | -1.69E-46 |
| MS.gene060852 | MS.gene79604 | 0.830951 | 2.20E-55 | -1.69E-46 |
| MS.gene060879 | MS.gene79604 | 0.824666 | 7.13E-54 | -1.69E-46 |
| MS.gene060998 | MS.gene79604 | 0.844482 | 7.36E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79604.t1 | MTR_7g010160 | 88.660 | 776 | 40 | 6 | 21 | 779 | 1 | 745 | 0.0 | 1256 |
| MS.gene79604.t1 | MTR_5g040600 | 44.050 | 479 | 225 | 13 | 322 | 778 | 451 | 908 | 9.43e-107 | 348 |
| MS.gene79604.t1 | MTR_8g467380 | 42.175 | 377 | 193 | 10 | 400 | 757 | 452 | 822 | 1.64e-73 | 256 |
| MS.gene79604.t1 | MTR_8g467390 | 36.184 | 304 | 174 | 8 | 400 | 693 | 70 | 363 | 6.90e-46 | 168 |
| MS.gene79604.t1 | MTR_4g005350 | 35.366 | 328 | 183 | 14 | 455 | 778 | 122 | 424 | 4.94e-39 | 150 |
| MS.gene79604.t1 | MTR_6g084440 | 35.433 | 254 | 146 | 7 | 529 | 779 | 363 | 601 | 1.50e-25 | 112 |
| MS.gene79604.t1 | MTR_6g084440 | 35.547 | 256 | 145 | 8 | 529 | 779 | 363 | 603 | 2.06e-24 | 108 |
| MS.gene79604.t1 | MTR_8g104270 | 33.977 | 259 | 144 | 11 | 529 | 777 | 318 | 559 | 2.17e-20 | 96.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79604.t1 | AT5G39785 | 54.768 | 409 | 164 | 9 | 388 | 778 | 200 | 605 | 6.45e-142 | 431 |
| MS.gene79604.t1 | AT5G39785 | 54.768 | 409 | 164 | 9 | 388 | 778 | 200 | 605 | 6.45e-142 | 431 |
| MS.gene79604.t1 | AT5G39785 | 54.768 | 409 | 164 | 9 | 388 | 778 | 200 | 605 | 6.45e-142 | 431 |
| MS.gene79604.t1 | AT5G39785 | 54.390 | 410 | 165 | 10 | 388 | 778 | 200 | 606 | 1.43e-139 | 425 |
| MS.gene79604.t1 | AT5G39785 | 51.613 | 434 | 164 | 10 | 388 | 778 | 200 | 630 | 2.97e-136 | 417 |
| MS.gene79604.t1 | AT1G69610 | 41.645 | 389 | 206 | 8 | 396 | 778 | 218 | 591 | 1.50e-80 | 270 |
| MS.gene79604.t1 | AT1G69610 | 41.645 | 389 | 206 | 8 | 396 | 778 | 263 | 636 | 7.99e-80 | 269 |
| MS.gene79604.t1 | AT1G69610 | 41.645 | 389 | 206 | 8 | 396 | 778 | 262 | 635 | 8.49e-80 | 269 |
| MS.gene79604.t1 | AT3G20260 | 34.226 | 336 | 186 | 10 | 455 | 778 | 124 | 436 | 1.35e-39 | 152 |
| MS.gene79604.t1 | AT3G01175 | 29.395 | 347 | 190 | 10 | 455 | 779 | 263 | 576 | 2.11e-27 | 118 |
| MS.gene79604.t1 | AT1G73850 | 32.308 | 260 | 157 | 8 | 529 | 778 | 383 | 633 | 1.05e-25 | 113 |
| MS.gene79604.t1 | AT1G73850 | 32.308 | 260 | 157 | 8 | 529 | 778 | 383 | 633 | 1.05e-25 | 113 |
Find 103 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAGAAGATTTGGACTTTA+AGG | 0.109617 | 7.3:+87878529 | MS.gene79604:CDS |
| CTGTAACTTCTGTAGAATTT+TGG | 0.152576 | 7.3:-87878911 | None:intergenic |
| TCAAATTTCAATATCAAAAT+TGG | 0.174991 | 7.3:+87877844 | MS.gene79604:CDS |
| AGCATAGAAAGTTTGGATTT+TGG | 0.203412 | 7.3:+87878560 | MS.gene79604:CDS |
| CTTCAAGTTCCTGTTATAAA+AGG | 0.208394 | 7.3:+87880830 | MS.gene79604:CDS |
| GAAAATTCAGCACTACAAAT+TGG | 0.209269 | 7.3:-87877624 | None:intergenic |
| AAGAATCCATTAGAACAATT+TGG | 0.248534 | 7.3:+87881804 | MS.gene79604:CDS |
| AATTAATCTAACAATTAATT+AGG | 0.249365 | 7.3:-87882837 | None:intergenic |
| TACAGATTCTATAAGTTCTT+TGG | 0.255079 | 7.3:+87878430 | MS.gene79604:CDS |
| GAAACGCCAAATTGTTCTAA+TGG | 0.262300 | 7.3:-87881810 | None:intergenic |
| TACCTAAAGCATACATCTTT+TGG | 0.269762 | 7.3:-87878967 | None:intergenic |
| AGGTTATGCAAACTCTGTTT+TGG | 0.278588 | 7.3:+87877469 | None:intergenic |
| ATGAAAAGGCTTTGAAGATA+TGG | 0.282269 | 7.3:+87880654 | MS.gene79604:CDS |
| TGAGGAAAGCATAGAAAGTT+TGG | 0.290433 | 7.3:+87878553 | MS.gene79604:CDS |
| TGGGACACTTGTGTCTTTCT+TGG | 0.296379 | 7.3:+87880612 | MS.gene79604:CDS |
| CATGAAGAGGTGGGAGTGTT+TGG | 0.309021 | 7.3:+87877750 | MS.gene79604:CDS |
| TTCTTGGGAATTTCTTCATT+GGG | 0.310775 | 7.3:+87880628 | MS.gene79604:CDS |
| GGTTATGAGCCGGACGATTT+CGG | 0.316787 | 7.3:+87878581 | MS.gene79604:CDS |
| AGAAGAAAATGTAGAAGATT+TGG | 0.317470 | 7.3:+87878520 | MS.gene79604:CDS |
| TTTCTTGGGAATTTCTTCAT+TGG | 0.318127 | 7.3:+87880627 | MS.gene79604:CDS |
| TTCTGAATCACCAAGGATTA+TGG | 0.320123 | 7.3:+87878823 | MS.gene79604:CDS |
| ACAGCAAAATTTGAAGCCTT+TGG | 0.338929 | 7.3:-87878002 | None:intergenic |
| TCTCTTATGAACTTCTTCAT+TGG | 0.346346 | 7.3:-87880560 | None:intergenic |
| CTCTTATGAACTTCTTCATT+GGG | 0.348346 | 7.3:-87880559 | None:intergenic |
| ATAGTTTCTTTAGACGTAAT+AGG | 0.349436 | 7.3:+87880522 | MS.gene79604:CDS |
| TTCGAATAAGCTCAAGAATT+CGG | 0.352648 | 7.3:+87878265 | MS.gene79604:CDS |
| GGGACACTTGTGTCTTTCTT+GGG | 0.372197 | 7.3:+87880613 | MS.gene79604:CDS |
| CGACACACTTTGGGAGCATC+AGG | 0.375614 | 7.3:+87878730 | MS.gene79604:CDS |
| TACCAAAAGATGTATGCTTT+AGG | 0.376310 | 7.3:+87878965 | MS.gene79604:CDS |
| TTCGGATAAGCTCAAGAATT+CGG | 0.389776 | 7.3:+87878178 | MS.gene79604:CDS |
| AACTTGAAGAAGTTTCTTCA+TGG | 0.394542 | 7.3:-87880816 | None:intergenic |
| ATATGGGAATCTGATCAATA+TGG | 0.395070 | 7.3:+87880671 | MS.gene79604:CDS |
| ATTGCGCATACAGGAGGTTT+CGG | 0.402197 | 7.3:+87878160 | MS.gene79604:CDS |
| ACAATTTGGCGTTTCATAAG+AGG | 0.404653 | 7.3:+87881818 | MS.gene79604:CDS |
| TTGAAGAAGGTTAAAGCTAC+TGG | 0.411572 | 7.3:+87878779 | MS.gene79604:CDS |
| AAAATTCAGCACTACAAATT+GGG | 0.415795 | 7.3:-87877623 | None:intergenic |
| TGGTTTACCTACTATCTTTG+AGG | 0.423238 | 7.3:+87878799 | MS.gene79604:CDS |
| TCGGAACAAGAGGTTGTTGA+TGG | 0.427227 | 7.3:+87878284 | MS.gene79604:CDS |
| GAAAGAAAATTACGCGCATA+TGG | 0.429075 | 7.3:-87878377 | None:intergenic |
| TGAAAAGGCTTTGAAGATAT+GGG | 0.437992 | 7.3:+87880655 | MS.gene79604:CDS |
| TTCAAATCTTCCATAATCCT+TGG | 0.444245 | 7.3:-87878833 | None:intergenic |
| GAACCGGTTCGACACACTTT+GGG | 0.448738 | 7.3:+87878721 | MS.gene79604:CDS |
| TAAATCTTTGTAGAAGAACT+TGG | 0.453472 | 7.3:-87880736 | None:intergenic |
| TCTTCATTGGGAATATGAAA+AGG | 0.453775 | 7.3:+87880640 | MS.gene79604:CDS |
| ATTATATAGTGACTTGGAAA+TGG | 0.455257 | 7.3:+87880583 | MS.gene79604:CDS |
| AACTACAGATTTCGATACAT+TGG | 0.456260 | 7.3:+87878487 | MS.gene79604:CDS |
| ACTACAGATTTCGATACATT+GGG | 0.462337 | 7.3:+87878488 | MS.gene79604:CDS |
| TCAACCCTTGGACCTTGAAA+AGG | 0.462599 | 7.3:-87880770 | None:intergenic |
| AACAAGTATGAGTTTATCTC+AGG | 0.467632 | 7.3:+87877951 | MS.gene79604:CDS |
| GCTCCCAAAGTGTGTCGAAC+CGG | 0.473141 | 7.3:-87878724 | None:intergenic |
| CGAACCGGTTCGACACACTT+TGG | 0.473629 | 7.3:+87878720 | MS.gene79604:CDS |
| GCCAACGGAACATTATCATT+CGG | 0.479479 | 7.3:-87878044 | None:intergenic |
| TCAGAATCCTCAAAGATAGT+AGG | 0.480405 | 7.3:-87878806 | None:intergenic |
| AGATTTGGACTTTAAGGATG+AGG | 0.489615 | 7.3:+87878535 | MS.gene79604:CDS |
| TCTTCTTCTCCGAAATCGTC+CGG | 0.490632 | 7.3:-87878590 | None:intergenic |
| GAAGATATAATGAATGAGCT+TGG | 0.496345 | 7.3:+87878614 | MS.gene79604:CDS |
| TACTAGCATGTCACTTGTGA+TGG | 0.502737 | 7.3:-87881771 | None:intergenic |
| AGAAGGTTCAATGAAGTAGC+TGG | 0.505395 | 7.3:+87880698 | MS.gene79604:CDS |
| ACTAGAAGTTGTGAATCAGC+AGG | 0.508732 | 7.3:-87881905 | None:intergenic |
| TAAATTCTTGGATGAACCAA+AGG | 0.510104 | 7.3:+87877986 | MS.gene79604:CDS |
| GCTTCTAACGGATCTTCAAA+AGG | 0.510840 | 7.3:+87881931 | MS.gene79604:CDS |
| TATAGGTCTAATGAAGTCAA+AGG | 0.515309 | 7.3:+87880427 | MS.gene79604:intron |
| TTGATCTCGATGAGTCGAAC+CGG | 0.518613 | 7.3:+87878705 | MS.gene79604:CDS |
| GAAGGAAAAGAGATTGAGAG+AGG | 0.519928 | 7.3:+87882590 | MS.gene79604:intron |
| CTCAGAAAAGTTACATGGAG+TGG | 0.520389 | 7.3:+87878238 | MS.gene79604:CDS |
| TTTGATAGAACAGCTGAAGA+TGG | 0.521278 | 7.3:+87878754 | MS.gene79604:CDS |
| TTATGGAAGATTTGAAGCCA+TGG | 0.526012 | 7.3:+87878840 | MS.gene79604:CDS |
| TGATACTGTTTCACATGAAG+AGG | 0.536152 | 7.3:+87877737 | MS.gene79604:CDS |
| ATTAGAAGAAGAAATCAGAC+AGG | 0.540963 | 7.3:+87878640 | MS.gene79604:CDS |
| GAGAATAGTGAAGAGGTTGT+TGG | 0.542023 | 7.3:+87878107 | MS.gene79604:CDS |
| TCCGAATGATAATGTTCCGT+TGG | 0.543662 | 7.3:+87878043 | MS.gene79604:CDS |
| GCTGAAGATGGAATTGAAGA+AGG | 0.548234 | 7.3:+87878766 | MS.gene79604:CDS |
| CGGAACAAGAGGTTGTTGAT+GGG | 0.550736 | 7.3:+87878285 | MS.gene79604:CDS |
| GCTCAAGAATTCGGAACAAG+AGG | 0.553712 | 7.3:+87878187 | MS.gene79604:CDS |
| GTTATCTGAGAATAGTGAAG+AGG | 0.554208 | 7.3:+87878100 | MS.gene79604:CDS |
| TAACAAACCAGCTGAATCAT+CGG | 0.557117 | 7.3:-87878081 | None:intergenic |
| TACTGTTTCACATGAAGAGG+TGG | 0.559153 | 7.3:+87877740 | MS.gene79604:CDS |
| CAAGGGTTGAAAATTATGCT+AGG | 0.564322 | 7.3:+87880783 | MS.gene79604:CDS |
| TGCTGATTCACAACTTCTAG+TGG | 0.570157 | 7.3:+87881907 | MS.gene79604:CDS |
| GCTCAAGAATTCGGAACAAG+AGG | 0.573553 | 7.3:+87878274 | MS.gene79604:CDS |
| AATGTCTCAGAAAAGTTACA+TGG | 0.576721 | 7.3:+87878233 | MS.gene79604:CDS |
| CTCAGAAAAGTTACACGAAG+AGG | 0.579058 | 7.3:+87878325 | MS.gene79604:CDS |
| TCTATAAGTTCTTTGGACGA+TGG | 0.582023 | 7.3:+87878437 | MS.gene79604:CDS |
| GTAGAGTGTTGAATATGTCA+AGG | 0.586380 | 7.3:+87882718 | MS.gene79604:CDS |
| ATGGTTCTACATGTATCCTA+CGG | 0.587088 | 7.3:-87882800 | None:intergenic |
| TGACTTGGAAATGGTCTATG+TGG | 0.588630 | 7.3:+87880592 | MS.gene79604:CDS |
| AAGAGAATTATATAGTGACT+TGG | 0.594503 | 7.3:+87880577 | MS.gene79604:CDS |
| ACTTCTAGTGGAGCTTCTAA+CGG | 0.594743 | 7.3:+87881919 | MS.gene79604:CDS |
| CTGATCAATATGGATTGAGA+AGG | 0.598782 | 7.3:+87880681 | MS.gene79604:CDS |
| CATGTGGCCGATGATTCAGC+TGG | 0.611802 | 7.3:+87878074 | MS.gene79604:CDS |
| AGAAAAGTTACATGGAGTGG+AGG | 0.616618 | 7.3:+87878241 | MS.gene79604:CDS |
| TTATTTGTTGCAGAAGACAA+AGG | 0.623970 | 7.3:+87881704 | MS.gene79604:intron |
| AGAAAAGTTACACGAAGAGG+AGG | 0.626156 | 7.3:+87878328 | MS.gene79604:CDS |
| ATGTCTTAAAGAACAACATG+TGG | 0.633494 | 7.3:+87881871 | MS.gene79604:CDS |
| TGTTGCAGAAGACAAAGGCA+AGG | 0.634467 | 7.3:+87881709 | MS.gene79604:intron |
| TTGAGGATTCTGAATCACCA+AGG | 0.644133 | 7.3:+87878816 | MS.gene79604:CDS |
| ACTGTTTCACATGAAGAGGT+GGG | 0.656938 | 7.3:+87877741 | MS.gene79604:CDS |
| CTAGAAGTTGTGAATCAGCA+GGG | 0.660177 | 7.3:-87881904 | None:intergenic |
| TAACGACTGATCAACTAGCA+TGG | 0.666424 | 7.3:+87882742 | MS.gene79604:CDS |
| GACTTGGAAATGGTCTATGT+GGG | 0.668369 | 7.3:+87880593 | MS.gene79604:CDS |
| AATAGTGAAGAGGTTGTTGG+TGG | 0.673028 | 7.3:+87878110 | MS.gene79604:CDS |
| ATCACATGCATTCTTCCACG+TGG | 0.740785 | 7.3:+87880494 | MS.gene79604:CDS |
| AAGAAACTATTAATGCCACG+TGG | 0.745035 | 7.3:-87880509 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTATATGAAATAATTA+GGG | - | chr7.3:87879998-87880017 | None:intergenic | 10.0% |
| !! | TATTGTTATATGAAATAATT+AGG | - | chr7.3:87879999-87880018 | None:intergenic | 10.0% |
| !! | TTATATACATAAAAACAAAA+GGG | - | chr7.3:87880240-87880259 | None:intergenic | 10.0% |
| !! | TTGAAAAAATAAAATTTCTT+TGG | - | chr7.3:87880100-87880119 | None:intergenic | 10.0% |
| !! | TTTATATACATAAAAACAAA+AGG | - | chr7.3:87880241-87880260 | None:intergenic | 10.0% |
| !!! | TTAATTTTTTAACCATATAA+TGG | - | chr7.3:87877535-87877554 | None:intergenic | 10.0% |
| !!! | TTATTGATCAATTTAATTTT+TGG | + | chr7.3:87877563-87877582 | MS.gene79604:intron | 10.0% |
| !!! | TTTCTTGTATATATTTTTAT+AGG | + | chr7.3:87880410-87880429 | MS.gene79604:intron | 10.0% |
| !! | AAAATTAAGCATAATGTAAA+AGG | - | chr7.3:87880348-87880367 | None:intergenic | 15.0% |
| !! | ATAGATAAATGATCAAAATA+AGG | + | chr7.3:87882092-87882111 | MS.gene79604:intron | 15.0% |
| !! | ATCGAAATATTAATAATTGA+AGG | + | chr7.3:87881237-87881256 | MS.gene79604:intron | 15.0% |
| !! | TCAAATTTCAATATCAAAAT+TGG | + | chr7.3:87877844-87877863 | MS.gene79604:CDS | 15.0% |
| !! | TCAATTAAATGAATATTTGA+AGG | - | chr7.3:87879482-87879501 | None:intergenic | 15.0% |
| !!! | AAATTGATTCTTGAAATTAT+AGG | + | chr7.3:87881291-87881310 | MS.gene79604:intron | 15.0% |
| !!! | CAAGTATATATTTTGTTAAT+TGG | - | chr7.3:87880147-87880166 | None:intergenic | 15.0% |
| !!! | TCAATGTATTTAAAATGTTA+GGG | - | chr7.3:87879159-87879178 | None:intergenic | 15.0% |
| !!! | TTCAATGTATTTAAAATGTT+AGG | - | chr7.3:87879160-87879179 | None:intergenic | 15.0% |
| !!! | TTTTTACTCTTTTCTATTAT+TGG | + | chr7.3:87879431-87879450 | MS.gene79604:intron | 15.0% |
| !! | AATGAAAATTCATCGTATTT+CGG | + | chr7.3:87882124-87882143 | MS.gene79604:intron | 20.0% |
| !! | GTAATAATTGACAAGTATTA+GGG | + | chr7.3:87880050-87880069 | MS.gene79604:intron | 20.0% |
| !! | GTAATTGAATTTCCATTATA+TGG | + | chr7.3:87877520-87877539 | MS.gene79604:intron | 20.0% |
| !! | TGTAATAATTGACAAGTATT+AGG | + | chr7.3:87880049-87880068 | MS.gene79604:intron | 20.0% |
| !! | TTCTATTAATCCTATTAAGT+CGG | - | chr7.3:87881184-87881203 | None:intergenic | 20.0% |
| !!! | AAAGAGTTTTAGTAAATTCT+TGG | + | chr7.3:87877974-87877993 | MS.gene79604:CDS | 20.0% |
| !!! | AATAATCCAAGTTTGATTTT+TGG | + | chr7.3:87882217-87882236 | MS.gene79604:intron | 20.0% |
| !!! | AATTTTTCATCAATTTTCCA+TGG | - | chr7.3:87878860-87878879 | None:intergenic | 20.0% |
| !!! | ACTTTTTAATGGTTTAGATA+AGG | - | chr7.3:87879302-87879321 | None:intergenic | 20.0% |
| !!! | AGAATTTTATGAATGTTTTG+AGG | + | chr7.3:87877707-87877726 | MS.gene79604:CDS | 20.0% |
| !!! | ATTCAAACTTTTTGTTAAGT+TGG | + | chr7.3:87881383-87881402 | MS.gene79604:intron | 20.0% |
| !!! | ATTTTGTTAATTGGTGTTTA+AGG | - | chr7.3:87880138-87880157 | None:intergenic | 20.0% |
| !!! | CTTTAAAAGTAATGTGAATA+TGG | + | chr7.3:87880859-87880878 | MS.gene79604:intron | 20.0% |
| !!! | GAATTGAAAATGATTTTAGT+GGG | - | chr7.3:87880454-87880473 | None:intergenic | 20.0% |
| !!! | GGTAAATAAATTTAAAGCAA+TGG | - | chr7.3:87879010-87879029 | None:intergenic | 20.0% |
| !!! | GTTTGTTAACTATAATAAGT+AGG | + | chr7.3:87879679-87879698 | MS.gene79604:intron | 20.0% |
| !!! | TACTATACCATTACTTTTAA+AGG | - | chr7.3:87880902-87880921 | None:intergenic | 20.0% |
| !!! | TCTATTATTGGTTTTGTTTA+TGG | + | chr7.3:87879443-87879462 | MS.gene79604:intron | 20.0% |
| !!! | TGAATTGAAAATGATTTTAG+TGG | - | chr7.3:87880455-87880474 | None:intergenic | 20.0% |
| !!! | TTGGAGTTTTAAAATATCAA+CGG | - | chr7.3:87879766-87879785 | None:intergenic | 20.0% |
| ! | AAAATTCAGCACTACAAATT+GGG | - | chr7.3:87877626-87877645 | None:intergenic | 25.0% |
| ! | AAGAATCCATTAGAACAATT+TGG | + | chr7.3:87881804-87881823 | MS.gene79604:CDS | 25.0% |
| ! | AAGAGAATTATATAGTGACT+TGG | + | chr7.3:87880577-87880596 | MS.gene79604:CDS | 25.0% |
| ! | AATGAAAATTGTCATGAACA+AGG | - | chr7.3:87879254-87879273 | None:intergenic | 25.0% |
| ! | ACACAACTTCTTATAAGAAA+AGG | - | chr7.3:87882529-87882548 | None:intergenic | 25.0% |
| ! | AGAAGAAAATGTAGAAGATT+TGG | + | chr7.3:87878520-87878539 | MS.gene79604:CDS | 25.0% |
| ! | AGACTTATATGGCTATATTT+AGG | - | chr7.3:87879653-87879672 | None:intergenic | 25.0% |
| ! | ATAGTTTCTTTAGACGTAAT+AGG | + | chr7.3:87880522-87880541 | MS.gene79604:CDS | 25.0% |
| ! | ATTGATGAAAAATTTCAGCA+AGG | + | chr7.3:87878866-87878885 | MS.gene79604:CDS | 25.0% |
| ! | CAAACAAGAAAAGACTTATA+TGG | - | chr7.3:87879664-87879683 | None:intergenic | 25.0% |
| ! | GTGTAGTAGTAATTAGATAT+TGG | - | chr7.3:87879785-87879804 | None:intergenic | 25.0% |
| ! | TAAATCTTTGTAGAAGAACT+TGG | - | chr7.3:87880739-87880758 | None:intergenic | 25.0% |
| ! | TAATTAGTGTAAATATGCGT+CGG | - | chr7.3:87881032-87881051 | None:intergenic | 25.0% |
| ! | TACAGATTCTATAAGTTCTT+TGG | + | chr7.3:87878430-87878449 | MS.gene79604:CDS | 25.0% |
| ! | TATCTATGCAATTGAAACTT+TGG | - | chr7.3:87882079-87882098 | None:intergenic | 25.0% |
| ! | TGAACTTTGAATAATCTATG+TGG | + | chr7.3:87880322-87880341 | MS.gene79604:intron | 25.0% |
| ! | TTAAGTGTAACTATATGTGT+CGG | + | chr7.3:87879892-87879911 | MS.gene79604:intron | 25.0% |
| ! | TTAGGAAAAAGTAAGAATGA+TGG | - | chr7.3:87882822-87882841 | None:intergenic | 25.0% |
| ! | TTAGTAAGACATTACACAAT+AGG | - | chr7.3:87882363-87882382 | None:intergenic | 25.0% |
| ! | TTTAATGGTTTAGATAAGGT+AGG | - | chr7.3:87879298-87879317 | None:intergenic | 25.0% |
| !! | ACTTTTGTGTCACATATAAT+AGG | - | chr7.3:87879383-87879402 | None:intergenic | 25.0% |
| !! | ATCAAACTTGGATTATTTTC+CGG | - | chr7.3:87882214-87882233 | None:intergenic | 25.0% |
| !! | ATTATATAGTGACTTGGAAA+TGG | + | chr7.3:87880583-87880602 | MS.gene79604:CDS | 25.0% |
| !! | ATTTTTCCTCTTCTTTTTCT+AGG | - | chr7.3:87877812-87877831 | None:intergenic | 25.0% |
| !! | CTCAATTTCATGATTTTCAT+TGG | - | chr7.3:87877649-87877668 | None:intergenic | 25.0% |
| !! | CTTTTGTGTCACATATAATA+GGG | - | chr7.3:87879382-87879401 | None:intergenic | 25.0% |
| !! | GTGCTTAAAAAGCATATTTA+GGG | + | chr7.3:87882146-87882165 | MS.gene79604:intron | 25.0% |
| !! | TAAACCATTAAAAAGTGTAG+AGG | + | chr7.3:87879306-87879325 | MS.gene79604:intron | 25.0% |
| !! | TGATTTTCGCAAATTATTAG+CGG | + | chr7.3:87881054-87881073 | MS.gene79604:intron | 25.0% |
| !! | TTTTTCTGAGTCAAAAATTG+AGG | + | chr7.3:87877674-87877693 | MS.gene79604:CDS | 25.0% |
| !!! | AAAGTAGTGATTTTGACAAA+AGG | + | chr7.3:87877907-87877926 | MS.gene79604:CDS | 25.0% |
| !!! | AAGTAGTGATTTTGACAAAA+GGG | + | chr7.3:87877908-87877927 | MS.gene79604:CDS | 25.0% |
| !!! | ATTTTATAGTTCTGAAGCAA+TGG | + | chr7.3:87877599-87877618 | MS.gene79604:CDS | 25.0% |
| !!! | GTGAATCACTATTTGATTTT+TGG | - | chr7.3:87881362-87881381 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTGAATTTGCAGA+AGG | + | chr7.3:87882572-87882591 | MS.gene79604:intron | 25.0% |
| !!! | TTTGTTATTGCAACAAAAAG+TGG | + | chr7.3:87879514-87879533 | MS.gene79604:intron | 25.0% |
| !!! | TTTTCAACAAAGTGTTCATA+AGG | + | chr7.3:87877493-87877512 | MS.gene79604:CDS | 25.0% |
| AAAGGGTCATAGAAAAATTG+TGG | - | chr7.3:87880223-87880242 | None:intergenic | 30.0% | |
| AACAAGTATGAGTTTATCTC+AGG | + | chr7.3:87877951-87877970 | MS.gene79604:CDS | 30.0% | |
| AACATAACTTTCCAAGAGAA+AGG | - | chr7.3:87880303-87880322 | None:intergenic | 30.0% | |
| AACTACAGATTTCGATACAT+TGG | + | chr7.3:87878487-87878506 | MS.gene79604:CDS | 30.0% | |
| AACTTGAAGAAGTTTCTTCA+TGG | - | chr7.3:87880819-87880838 | None:intergenic | 30.0% | |
| AATGTCTCAGAAAAGTTACA+TGG | + | chr7.3:87878233-87878252 | MS.gene79604:CDS | 30.0% | |
| ACTACAGATTTCGATACATT+GGG | + | chr7.3:87878488-87878507 | MS.gene79604:CDS | 30.0% | |
| AGAAGAGGAAAAATCAAAGT+TGG | + | chr7.3:87877818-87877837 | MS.gene79604:CDS | 30.0% | |
| AGATCCTAATTGTACTTGTT+AGG | + | chr7.3:87882314-87882333 | MS.gene79604:intron | 30.0% | |
| AGTGCATGATCTATTATCAA+CGG | + | chr7.3:87881556-87881575 | MS.gene79604:intron | 30.0% | |
| ATATGGGAATCTGATCAATA+TGG | + | chr7.3:87880671-87880690 | MS.gene79604:CDS | 30.0% | |
| ATGTCTTAAAGAACAACATG+TGG | + | chr7.3:87881871-87881890 | MS.gene79604:CDS | 30.0% | |
| ATTAGAAGAAGAAATCAGAC+AGG | + | chr7.3:87878640-87878659 | MS.gene79604:CDS | 30.0% | |
| CAAAATATTGTTGGAAGAGT+TGG | + | chr7.3:87882172-87882191 | MS.gene79604:intron | 30.0% | |
| CTCACATATAGAACTGTATA+TGG | - | chr7.3:87881648-87881667 | None:intergenic | 30.0% | |
| CTCTTATGAACTTCTTCATT+GGG | - | chr7.3:87880562-87880581 | None:intergenic | 30.0% | |
| CTGAGTTTCTCTCAAATTAA+GGG | - | chr7.3:87880024-87880043 | None:intergenic | 30.0% | |
| CTGTAACTATATTTACAGCA+GGG | - | chr7.3:87881450-87881469 | None:intergenic | 30.0% | |
| GAAAATTCAGCACTACAAAT+TGG | - | chr7.3:87877627-87877646 | None:intergenic | 30.0% | |
| GAAGATATAATGAATGAGCT+TGG | + | chr7.3:87878614-87878633 | MS.gene79604:CDS | 30.0% | |
| TAAATTCTTGGATGAACCAA+AGG | + | chr7.3:87877986-87878005 | MS.gene79604:CDS | 30.0% | |
| TACCAAAAGATGTATGCTTT+AGG | + | chr7.3:87878965-87878984 | MS.gene79604:CDS | 30.0% | |
| TATAGGTCTAATGAAGTCAA+AGG | + | chr7.3:87880427-87880446 | MS.gene79604:intron | 30.0% | |
| TATGAAACATGGATACTTCT+CGG | - | chr7.3:87879959-87879978 | None:intergenic | 30.0% | |
| TCAACTAACCAGATTTAGTA+GGG | - | chr7.3:87879338-87879357 | None:intergenic | 30.0% | |
| TCTCTTATGAACTTCTTCAT+TGG | - | chr7.3:87880563-87880582 | None:intergenic | 30.0% | |
| TCTGAGTTTCTCTCAAATTA+AGG | - | chr7.3:87880025-87880044 | None:intergenic | 30.0% | |
| TCTTCATTGGGAATATGAAA+AGG | + | chr7.3:87880640-87880659 | MS.gene79604:CDS | 30.0% | |
| TGAGACAAAATAGTTCATCA+TGG | + | chr7.3:87881664-87881683 | MS.gene79604:intron | 30.0% | |
| TGAGAGAAAAAGTAAAGAAC+TGG | - | chr7.3:87882678-87882697 | None:intergenic | 30.0% | |
| TGTAGAAGATTTGGACTTTA+AGG | + | chr7.3:87878529-87878548 | MS.gene79604:CDS | 30.0% | |
| TGTCTGTATATATGCTTCAT+AGG | + | chr7.3:87881126-87881145 | MS.gene79604:intron | 30.0% | |
| TTATTGCAACAAAAAGTGGT+AGG | + | chr7.3:87879518-87879537 | MS.gene79604:intron | 30.0% | |
| TTCAAATCTTCCATAATCCT+TGG | - | chr7.3:87878836-87878855 | None:intergenic | 30.0% | |
| TTCGAATAAGCTCAAGAATT+CGG | + | chr7.3:87878265-87878284 | MS.gene79604:CDS | 30.0% | |
| TTCTTGGGAATTTCTTCATT+GGG | + | chr7.3:87880628-87880647 | MS.gene79604:CDS | 30.0% | |
| TTTCCCTAACAAGTACAATT+AGG | - | chr7.3:87882321-87882340 | None:intergenic | 30.0% | |
| TTTCTTGGGAATTTCTTCAT+TGG | + | chr7.3:87880627-87880646 | MS.gene79604:CDS | 30.0% | |
| ! | AACTTTTTATGTCACATGCT+TGG | + | chr7.3:87879570-87879589 | MS.gene79604:intron | 30.0% |
| ! | AAGTAGGAACACTATTCTTT+TGG | + | chr7.3:87879695-87879714 | MS.gene79604:intron | 30.0% |
| ! | AAGTTCTCACCTTTTATAAC+AGG | - | chr7.3:87880842-87880861 | None:intergenic | 30.0% |
| ! | ACTAAATTGACCGACTTAAT+AGG | + | chr7.3:87881171-87881190 | MS.gene79604:intron | 30.0% |
| ! | AGATCAATTTTGTAAACCGT+AGG | + | chr7.3:87882784-87882803 | MS.gene79604:CDS | 30.0% |
| ! | AGCATAGAAAGTTTGGATTT+TGG | + | chr7.3:87878560-87878579 | MS.gene79604:CDS | 30.0% |
| ! | ATAGAGAATGAACCTTTTCA+AGG | + | chr7.3:87880758-87880777 | MS.gene79604:CDS | 30.0% |
| ! | CAACTCTTCCAACAATATTT+TGG | - | chr7.3:87882174-87882193 | None:intergenic | 30.0% |
| ! | CTGTAACTTCTGTAGAATTT+TGG | - | chr7.3:87878914-87878933 | None:intergenic | 30.0% |
| ! | CTTCAAGTTCCTGTTATAAA+AGG | + | chr7.3:87880830-87880849 | MS.gene79604:CDS | 30.0% |
| ! | GATCCTAATTGTACTTGTTA+GGG | + | chr7.3:87882315-87882334 | MS.gene79604:intron | 30.0% |
| ! | GGTGCTTAAAAAGCATATTT+AGG | + | chr7.3:87882145-87882164 | MS.gene79604:intron | 30.0% |
| ! | GGTTAGACCTTTAAAAGTAA+TGG | + | chr7.3:87880892-87880911 | MS.gene79604:intron | 30.0% |
| ! | TACCTAAAGCATACATCTTT+TGG | - | chr7.3:87878970-87878989 | None:intergenic | 30.0% |
| ! | TTATTTGTTGCAGAAGACAA+AGG | + | chr7.3:87881704-87881723 | MS.gene79604:intron | 30.0% |
| ! | TTTTGACCTAGAAAAAGAAG+AGG | + | chr7.3:87877803-87877822 | MS.gene79604:CDS | 30.0% |
| !! | ACTTTTAAAGGTCTAACCAA+TGG | - | chr7.3:87880890-87880909 | None:intergenic | 30.0% |
| !! | ATGAAAAGGCTTTGAAGATA+TGG | + | chr7.3:87880654-87880673 | MS.gene79604:CDS | 30.0% |
| !! | GATTTTAGTGAGGAATTGAA+GGG | + | chr7.3:87877873-87877892 | MS.gene79604:CDS | 30.0% |
| !! | TGAAAAGGCTTTGAAGATAT+GGG | + | chr7.3:87880655-87880674 | MS.gene79604:CDS | 30.0% |
| !!! | TCTTTACTTTTTCTCTCAAG+TGG | + | chr7.3:87882680-87882699 | MS.gene79604:CDS | 30.0% |
| AACTAAACCAAACATTGACC+AGG | - | chr7.3:87879202-87879221 | None:intergenic | 35.0% | |
| AAGAAACTATTAATGCCACG+TGG | - | chr7.3:87880512-87880531 | None:intergenic | 35.0% | |
| AATCGAACCATAGACAATGT+CGG | - | chr7.3:87879110-87879129 | None:intergenic | 35.0% | |
| AATCGAATAGACAGTTCAAC+CGG | + | chr7.3:87879072-87879091 | MS.gene79604:intron | 35.0% | |
| AATGCAAAGCTACCAAGTAA+TGG | - | chr7.3:87879627-87879646 | None:intergenic | 35.0% | |
| ACAATTTGGCGTTTCATAAG+AGG | + | chr7.3:87881818-87881837 | MS.gene79604:CDS | 35.0% | |
| ACTTTCTTTGAACTATGTGG+GGG | + | chr7.3:87881410-87881429 | MS.gene79604:intron | 35.0% | |
| ATGCAAAGCTACCAAGTAAT+GGG | - | chr7.3:87879626-87879645 | None:intergenic | 35.0% | |
| ATGGGAGCAATTCCAAAAAT+AGG | - | chr7.3:87882248-87882267 | None:intergenic | 35.0% | |
| ATTAGGATCTTTGACCTCTA+CGG | - | chr7.3:87882304-87882323 | None:intergenic | 35.0% | |
| CAAGGGTTGAAAATTATGCT+AGG | + | chr7.3:87880783-87880802 | MS.gene79604:CDS | 35.0% | |
| CACTTTCTTTGAACTATGTG+GGG | + | chr7.3:87881409-87881428 | MS.gene79604:intron | 35.0% | |
| CCACTTTCTTTGAACTATGT+GGG | + | chr7.3:87881408-87881427 | MS.gene79604:intron | 35.0% | |
| CTCAACTAACCAGATTTAGT+AGG | - | chr7.3:87879339-87879358 | None:intergenic | 35.0% | |
| CTTTCCAAGAGAAAGGAAAA+TGG | - | chr7.3:87880296-87880315 | None:intergenic | 35.0% | |
| GAAACGCCAAATTGTTCTAA+TGG | - | chr7.3:87881813-87881832 | None:intergenic | 35.0% | |
| GAAAGAAAATTACGCGCATA+TGG | - | chr7.3:87878380-87878399 | None:intergenic | 35.0% | |
| GCTGTAACTATATTTACAGC+AGG | - | chr7.3:87881451-87881470 | None:intergenic | 35.0% | |
| GTTATCTGAGAATAGTGAAG+AGG | + | chr7.3:87878100-87878119 | MS.gene79604:CDS | 35.0% | |
| TAACAAACCAGCTGAATCAT+CGG | - | chr7.3:87878084-87878103 | None:intergenic | 35.0% | |
| TACTACTACACTATGAAGCA+CGG | + | chr7.3:87879794-87879813 | MS.gene79604:intron | 35.0% | |
| TCAGAATCCTCAAAGATAGT+AGG | - | chr7.3:87878809-87878828 | None:intergenic | 35.0% | |
| TCCACTTTCTTTGAACTATG+TGG | + | chr7.3:87881407-87881426 | MS.gene79604:intron | 35.0% | |
| TCTATAAGTTCTTTGGACGA+TGG | + | chr7.3:87878437-87878456 | MS.gene79604:CDS | 35.0% | |
| TGATACTGTTTCACATGAAG+AGG | + | chr7.3:87877737-87877756 | MS.gene79604:CDS | 35.0% | |
| TGGTTTACCTACTATCTTTG+AGG | + | chr7.3:87878799-87878818 | MS.gene79604:CDS | 35.0% | |
| TTCGGATAAGCTCAAGAATT+CGG | + | chr7.3:87878178-87878197 | MS.gene79604:CDS | 35.0% | |
| TTCTGAATCACCAAGGATTA+TGG | + | chr7.3:87878823-87878842 | MS.gene79604:CDS | 35.0% | |
| TTGAAGAAGGTTAAAGCTAC+TGG | + | chr7.3:87878779-87878798 | MS.gene79604:CDS | 35.0% | |
| TTTGATAGAACAGCTGAAGA+TGG | + | chr7.3:87878754-87878773 | MS.gene79604:CDS | 35.0% | |
| ! | ACAGCAAAATTTGAAGCCTT+TGG | - | chr7.3:87878005-87878024 | None:intergenic | 35.0% |
| ! | AGAGATTGAGAGAGGTTTTA+AGG | + | chr7.3:87882598-87882617 | MS.gene79604:CDS | 35.0% |
| ! | AGATTTGGACTTTAAGGATG+AGG | + | chr7.3:87878535-87878554 | MS.gene79604:CDS | 35.0% |
| ! | ATGGTTCTACATGTATCCTA+CGG | - | chr7.3:87882803-87882822 | None:intergenic | 35.0% |
| ! | CGGAACAAGAGGTTTTTAAT+GGG | + | chr7.3:87878198-87878217 | MS.gene79604:CDS | 35.0% |
| ! | CTAGCATAATTTTCAACCCT+TGG | - | chr7.3:87880785-87880804 | None:intergenic | 35.0% |
| ! | CTGATCAATATGGATTGAGA+AGG | + | chr7.3:87880681-87880700 | MS.gene79604:CDS | 35.0% |
| ! | TCGGAACAAGAGGTTTTTAA+TGG | + | chr7.3:87878197-87878216 | MS.gene79604:CDS | 35.0% |
| ! | TGAGGAAAGCATAGAAAGTT+TGG | + | chr7.3:87878553-87878572 | MS.gene79604:CDS | 35.0% |
| ! | TGTGAATATGGTTAGTCCAT+TGG | + | chr7.3:87880871-87880890 | MS.gene79604:intron | 35.0% |
| ! | TTATGGAAGATTTGAAGCCA+TGG | + | chr7.3:87878840-87878859 | MS.gene79604:CDS | 35.0% |
| ! | TTTTTGTCGGACACAGATTT+TGG | + | chr7.3:87878461-87878480 | MS.gene79604:CDS | 35.0% |
| !! | AAAGCCATTTTCCTTTCTCT+TGG | + | chr7.3:87880289-87880308 | MS.gene79604:intron | 35.0% |
| !! | AAGGTAGGTTTTGATGATCA+AGG | - | chr7.3:87879283-87879302 | None:intergenic | 35.0% |
| !! | AGCATGCTTTATTTACAGCA+GGG | + | chr7.3:87881603-87881622 | MS.gene79604:intron | 35.0% |
| !! | AGTGATTTTGACAAAAGGGT+TGG | + | chr7.3:87877912-87877931 | MS.gene79604:CDS | 35.0% |
| !! | ATATGCAACTTGCTGAAGAA+AGG | - | chr7.3:87879031-87879050 | None:intergenic | 35.0% |
| !! | CGATTTTAGTGAGGAATTGA+AGG | + | chr7.3:87877872-87877891 | MS.gene79604:CDS | 35.0% |
| !! | GAGAAGTATCCATGTTTCAT+AGG | + | chr7.3:87879958-87879977 | MS.gene79604:intron | 35.0% |
| !! | GTAGAGTGTTGAATATGTCA+AGG | + | chr7.3:87882718-87882737 | MS.gene79604:CDS | 35.0% |
| !! | GTCACCTCTACACTTTTTAA+TGG | - | chr7.3:87879313-87879332 | None:intergenic | 35.0% |
| !! | TTGGAATTGCGATTTTAGTG+AGG | + | chr7.3:87877863-87877882 | MS.gene79604:CDS | 35.0% |
| !!! | TTTGGACGATGGTTTTTTGT+CGG | + | chr7.3:87878448-87878467 | MS.gene79604:CDS | 35.0% |
| !!! | TTTGGATTTTGGTTATGAGC+CGG | + | chr7.3:87878571-87878590 | MS.gene79604:CDS | 35.0% |
| !!! | TTTTTGGAGTCGCCTATTTT+TGG | + | chr7.3:87882233-87882252 | MS.gene79604:intron | 35.0% |
| AATAGTGAAGAGGTTGTTGG+TGG | + | chr7.3:87878110-87878129 | MS.gene79604:CDS | 40.0% | |
| ACAAAAAGTGGTAGGAATGG+AGG | + | chr7.3:87879526-87879545 | MS.gene79604:intron | 40.0% | |
| ACTAGAAGTTGTGAATCAGC+AGG | - | chr7.3:87881908-87881927 | None:intergenic | 40.0% | |
| ACTGTTTCACATGAAGAGGT+GGG | + | chr7.3:87877741-87877760 | MS.gene79604:CDS | 40.0% | |
| ACTTCTAGTGGAGCTTCTAA+CGG | + | chr7.3:87881919-87881938 | MS.gene79604:CDS | 40.0% | |
| AGAAAAATTGCGCATACAGG+AGG | + | chr7.3:87878154-87878173 | MS.gene79604:CDS | 40.0% | |
| AGAAAAGTTACACGAAGAGG+AGG | + | chr7.3:87878328-87878347 | MS.gene79604:CDS | 40.0% | |
| AGAAAAGTTACATGGAGTGG+AGG | + | chr7.3:87878241-87878260 | MS.gene79604:CDS | 40.0% | |
| AGAAGGTTCAATGAAGTAGC+TGG | + | chr7.3:87880698-87880717 | MS.gene79604:CDS | 40.0% | |
| ATCGTGTGGTTAAGATGATG+TGG | + | chr7.3:87881506-87881525 | MS.gene79604:intron | 40.0% | |
| CCCACATAGTTCAAAGAAAG+TGG | - | chr7.3:87881411-87881430 | None:intergenic | 40.0% | |
| CTAGAAGTTGTGAATCAGCA+GGG | - | chr7.3:87881907-87881926 | None:intergenic | 40.0% | |
| CTAGGTGGTGAAATACCTTA+AGG | + | chr7.3:87882275-87882294 | MS.gene79604:intron | 40.0% | |
| CTCAGAAAAATTGCGCATAC+AGG | + | chr7.3:87878151-87878170 | MS.gene79604:CDS | 40.0% | |
| CTCAGAAAAGTTACACGAAG+AGG | + | chr7.3:87878325-87878344 | MS.gene79604:CDS | 40.0% | |
| CTCAGAAAAGTTACATGGAG+TGG | + | chr7.3:87878238-87878257 | MS.gene79604:CDS | 40.0% | |
| CTTTCCAAACTTGTCTTGCA+TGG | - | chr7.3:87880273-87880292 | None:intergenic | 40.0% | |
| GAAGGAAAAGAGATTGAGAG+AGG | + | chr7.3:87882590-87882609 | MS.gene79604:intron | 40.0% | |
| GACTTGGAAATGGTCTATGT+GGG | + | chr7.3:87880593-87880612 | MS.gene79604:CDS | 40.0% | |
| GAGAATAGTGAAGAGGTTGT+TGG | + | chr7.3:87878107-87878126 | MS.gene79604:CDS | 40.0% | |
| GCAACAAAAAGTGGTAGGAA+TGG | + | chr7.3:87879523-87879542 | MS.gene79604:intron | 40.0% | |
| GCCAACGGAACATTATCATT+CGG | - | chr7.3:87878047-87878066 | None:intergenic | 40.0% | |
| GCGACTCCAAAAATCAAACT+TGG | - | chr7.3:87882226-87882245 | None:intergenic | 40.0% | |
| GCTGAAGATGGAATTGAAGA+AGG | + | chr7.3:87878766-87878785 | MS.gene79604:CDS | 40.0% | |
| GGGTCATAGAAAAATTGTGG+TGG | - | chr7.3:87880220-87880239 | None:intergenic | 40.0% | |
| GTTTCATAGGACTACTGCAT+CGG | + | chr7.3:87879971-87879990 | MS.gene79604:intron | 40.0% | |
| TAACGACTGATCAACTAGCA+TGG | + | chr7.3:87882742-87882761 | MS.gene79604:CDS | 40.0% | |
| TAATGCCAATCCCCATTACT+TGG | + | chr7.3:87879612-87879631 | MS.gene79604:intron | 40.0% | |
| TACACTATGAAGCACGGATA+CGG | + | chr7.3:87879800-87879819 | MS.gene79604:intron | 40.0% | |
| TACATTGAACCATGACCTAG+AGG | + | chr7.3:87879171-87879190 | MS.gene79604:intron | 40.0% | |
| TACTGTTTCACATGAAGAGG+TGG | + | chr7.3:87877740-87877759 | MS.gene79604:CDS | 40.0% | |
| TATGAAGCACAGACACTCTT+CGG | + | chr7.3:87880958-87880977 | MS.gene79604:intron | 40.0% | |
| TATTGTGTTTGTGTCGTGTC+TGG | + | chr7.3:87881097-87881116 | MS.gene79604:intron | 40.0% | |
| TCATGAACCGACATTGTCTA+TGG | + | chr7.3:87879100-87879119 | MS.gene79604:intron | 40.0% | |
| TCGCAAATTATTAGCGGTGT+TGG | + | chr7.3:87881060-87881079 | MS.gene79604:intron | 40.0% | |
| TGAGTCAAAAATTGAGGCTG+AGG | + | chr7.3:87877680-87877699 | MS.gene79604:CDS | 40.0% | |
| TGCAAAGCTACCAAGTAATG+GGG | - | chr7.3:87879625-87879644 | None:intergenic | 40.0% | |
| TGCAGTAGTCCTATGAAACA+TGG | - | chr7.3:87879970-87879989 | None:intergenic | 40.0% | |
| TTAGGATCTTTGACCTCTAC+GGG | - | chr7.3:87882303-87882322 | None:intergenic | 40.0% | |
| TTGAGGATTCTGAATCACCA+AGG | + | chr7.3:87878816-87878835 | MS.gene79604:CDS | 40.0% | |
| ! | CTTAAGGTATTTCACCACCT+AGG | - | chr7.3:87882277-87882296 | None:intergenic | 40.0% |
| ! | GCTTCTAACGGATCTTCAAA+AGG | + | chr7.3:87881931-87881950 | MS.gene79604:CDS | 40.0% |
| ! | GTAACTATATGTGTCGGTGT+CGG | + | chr7.3:87879898-87879917 | MS.gene79604:intron | 40.0% |
| ! | TACTAGCATGTCACTTGTGA+TGG | - | chr7.3:87881774-87881793 | None:intergenic | 40.0% |
| ! | TCCGAATGATAATGTTCCGT+TGG | + | chr7.3:87878043-87878062 | MS.gene79604:CDS | 40.0% |
| ! | TGACTTGGAAATGGTCTATG+TGG | + | chr7.3:87880592-87880611 | MS.gene79604:CDS | 40.0% |
| ! | TTAGGGCGCCAAAATATTGT+TGG | + | chr7.3:87882163-87882182 | MS.gene79604:intron | 40.0% |
| !! | ATGAACCTTTTCAAGGTCCA+AGG | + | chr7.3:87880765-87880784 | MS.gene79604:CDS | 40.0% |
| !! | ATGTCGGTTCATGATTCAAC+CGG | - | chr7.3:87879094-87879113 | None:intergenic | 40.0% |
| !! | CAGCATGCTTTATTTACAGC+AGG | + | chr7.3:87881602-87881621 | MS.gene79604:intron | 40.0% |
| !! | TGAACCTTTTCAAGGTCCAA+GGG | + | chr7.3:87880766-87880785 | MS.gene79604:CDS | 40.0% |
| !! | TGCTGATTCACAACTTCTAG+TGG | + | chr7.3:87881907-87881926 | MS.gene79604:CDS | 40.0% |
| !!! | TTGAGAGAGGTTTTAAGGAG+TGG | + | chr7.3:87882603-87882622 | MS.gene79604:CDS | 40.0% |
| !!! | TTTTGGAATTGCTCCCATAG+CGG | + | chr7.3:87882250-87882269 | MS.gene79604:intron | 40.0% |
| AAAGTGGTAGGAATGGAGGT+TGG | + | chr7.3:87879530-87879549 | MS.gene79604:intron | 45.0% | |
| ATCACATGCATTCTTCCACG+TGG | + | chr7.3:87880494-87880513 | MS.gene79604:CDS | 45.0% | |
| ATTGCGCATACAGGAGGTTT+CGG | + | chr7.3:87878160-87878179 | MS.gene79604:CDS | 45.0% | |
| CAAACTTGTCTTGCATGGCA+AGG | - | chr7.3:87880268-87880287 | None:intergenic | 45.0% | |
| CGGAACAAGAGGTTGTTGAT+GGG | + | chr7.3:87878285-87878304 | MS.gene79604:CDS | 45.0% | |
| CTTGCCATGCAAGACAAGTT+TGG | + | chr7.3:87880266-87880285 | MS.gene79604:intron | 45.0% | |
| GCTCAAGAATTCGGAACAAG+AGG | + | chr7.3:87878187-87878206 | MS.gene79604:CDS | 45.0% | |
| GGAATGGAGGTTGGACATTA+AGG | + | chr7.3:87879539-87879558 | MS.gene79604:intron | 45.0% | |
| GGGACACTTGTGTCTTTCTT+GGG | + | chr7.3:87880613-87880632 | MS.gene79604:CDS | 45.0% | |
| TCAACCCTTGGACCTTGAAA+AGG | - | chr7.3:87880773-87880792 | None:intergenic | 45.0% | |
| TCCGTTGGCGAAAAATCATG+TGG | + | chr7.3:87878058-87878077 | MS.gene79604:CDS | 45.0% | |
| TCGGAACAAGAGGTTGTTGA+TGG | + | chr7.3:87878284-87878303 | MS.gene79604:CDS | 45.0% | |
| TCTTCTTCTCCGAAATCGTC+CGG | - | chr7.3:87878593-87878612 | None:intergenic | 45.0% | |
| TGGGACACTTGTGTCTTTCT+TGG | + | chr7.3:87880612-87880631 | MS.gene79604:CDS | 45.0% | |
| TGGTGACATGACTCTCTTTC+CGG | + | chr7.3:87882192-87882211 | MS.gene79604:intron | 45.0% | |
| TGTTGCAGAAGACAAAGGCA+AGG | + | chr7.3:87881709-87881728 | MS.gene79604:intron | 45.0% | |
| TTGATCTCGATGAGTCGAAC+CGG | + | chr7.3:87878705-87878724 | MS.gene79604:CDS | 45.0% | |
| ! | AGCTACCAAGTAATGGGGAT+TGG | - | chr7.3:87879620-87879639 | None:intergenic | 45.0% |
| ! | GCCACATGATTTTTCGCCAA+CGG | - | chr7.3:87878062-87878081 | None:intergenic | 45.0% |
| ! | TTTGGAATTGCTCCCATAGC+GGG | + | chr7.3:87882251-87882270 | MS.gene79604:intron | 45.0% |
| !! | TTCTCGGATTAGCTGTGTTC+CGG | - | chr7.3:87879943-87879962 | None:intergenic | 45.0% |
| AACTGTATATGGTCCCCCAC+GGG | - | chr7.3:87881637-87881656 | None:intergenic | 50.0% | |
| ACATGAGTCGTGTCCTACAC+CGG | + | chr7.3:87879921-87879940 | MS.gene79604:intron | 50.0% | |
| ACCACACGATTCAGATCCGA+CGG | - | chr7.3:87881496-87881515 | None:intergenic | 50.0% | |
| ACGGCTGAGATGCAAAACAG+CGG | + | chr7.3:87881575-87881594 | MS.gene79604:intron | 50.0% | |
| CTTTGAACTATGTGGGGGAC+CGG | + | chr7.3:87881415-87881434 | MS.gene79604:intron | 50.0% | |
| GAACTGTATATGGTCCCCCA+CGG | - | chr7.3:87881638-87881657 | None:intergenic | 50.0% | |
| GGTGACGACCCTACTAAATC+TGG | + | chr7.3:87879327-87879346 | MS.gene79604:intron | 50.0% | |
| GGTTATGAGCCGGACGATTT+CGG | + | chr7.3:87878581-87878600 | MS.gene79604:CDS | 50.0% | |
| TACAGCAGGGAATCCAATCC+CGG | - | chr7.3:87881635-87881616 | None:intergenic | 50.0% | |
| TTTGAACTATGTGGGGGACC+GGG | + | chr7.3:87881416-87881435 | MS.gene79604:intron | 50.0% | |
| ! | GATTAGCTGTGTTCCGGTGT+AGG | - | chr7.3:87879937-87879956 | None:intergenic | 50.0% |
| !! | CATGAAGAGGTGGGAGTGTT+TGG | + | chr7.3:87877750-87877769 | MS.gene79604:CDS | 50.0% |
| !! | GAACCGGTTCGACACACTTT+GGG | + | chr7.3:87878721-87878740 | MS.gene79604:CDS | 50.0% |
| ACGGATACGGACACAGACTC+TGG | + | chr7.3:87879813-87879832 | MS.gene79604:intron | 55.0% | |
| AGCAGGGAATCCAATCCCGT+GGG | + | chr7.3:87881619-87881638 | MS.gene79604:intron | 55.0% | |
| ATTGACCAGGCGAGACCTCT+AGG | - | chr7.3:87879189-87879208 | None:intergenic | 55.0% | |
| CATGTGGCCGATGATTCAGC+TGG | + | chr7.3:87878074-87878093 | MS.gene79604:CDS | 55.0% | |
| CTGTAACAGCACAGAGCCGT+CGG | + | chr7.3:87881477-87881496 | MS.gene79604:intron | 55.0% | |
| GCTCCCAAAGTGTGTCGAAC+CGG | - | chr7.3:87878727-87878746 | None:intergenic | 55.0% | |
| GGTCTCGCCTGGTCAATGTT+TGG | + | chr7.3:87879192-87879211 | MS.gene79604:intron | 55.0% | |
| TATATGGTCCCCCACGGGAT+TGG | - | chr7.3:87881632-87881651 | None:intergenic | 55.0% | |
| ! | ATACCTTAAGGCGCCCGTAG+AGG | + | chr7.3:87882287-87882306 | MS.gene79604:intron | 55.0% |
| ! | TATGCGTCGGTGTGTCGTGT+CGG | - | chr7.3:87881019-87881038 | None:intergenic | 55.0% |
| !! | CGAACCGGTTCGACACACTT+TGG | + | chr7.3:87878720-87878739 | MS.gene79604:CDS | 55.0% |
| !! | CGACACACTTTGGGAGCATC+AGG | + | chr7.3:87878730-87878749 | MS.gene79604:CDS | 55.0% |
| ACTATGTGGGGGACCGGGAT+TGG | + | chr7.3:87881421-87881440 | MS.gene79604:intron | 60.0% | |
| CAGCAGGGAATCCAATCCCG+TGG | + | chr7.3:87881618-87881637 | MS.gene79604:intron | 60.0% | |
| CAGGCGAGACCTCTAGGTCA+TGG | - | chr7.3:87879183-87879202 | None:intergenic | 60.0% | |
| CAGGGAATCCAATCCCGTGG+GGG | + | chr7.3:87881621-87881640 | MS.gene79604:intron | 60.0% | |
| CATGACCTAGAGGTCTCGCC+TGG | + | chr7.3:87879181-87879200 | MS.gene79604:intron | 60.0% | |
| GCAGGGAATCCAATCCCGTG+GGG | + | chr7.3:87881620-87881639 | MS.gene79604:intron | 60.0% | |
| GCCGTCGGATCTGAATCGTG+TGG | + | chr7.3:87881492-87881511 | MS.gene79604:intron | 60.0% | |
| TCACCACCTAGGCCCGCTAT+GGG | - | chr7.3:87882266-87882285 | None:intergenic | 60.0% | |
| TGACCTCTACGGGCGCCTTA+AGG | - | chr7.3:87882293-87882312 | None:intergenic | 60.0% | |
| TTCACCACCTAGGCCCGCTA+TGG | - | chr7.3:87882267-87882286 | None:intergenic | 60.0% | |
| !! | ATTGCTCCCATAGCGGGCCT+AGG | + | chr7.3:87882257-87882276 | MS.gene79604:intron | 60.0% |
| !! | GCTCCCATAGCGGGCCTAGG+TGG | + | chr7.3:87882260-87882279 | MS.gene79604:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 87877474 | 87882845 | 87877474 | ID=MS.gene79604 |
| chr7.3 | mRNA | 87877474 | 87882845 | 87877474 | ID=MS.gene79604.t1;Parent=MS.gene79604 |
| chr7.3 | exon | 87877474 | 87877514 | 87877474 | ID=MS.gene79604.t1.exon1;Parent=MS.gene79604.t1 |
| chr7.3 | CDS | 87877474 | 87877514 | 87877474 | ID=cds.MS.gene79604.t1;Parent=MS.gene79604.t1 |
| chr7.3 | exon | 87877599 | 87878986 | 87877599 | ID=MS.gene79604.t1.exon2;Parent=MS.gene79604.t1 |
| chr7.3 | CDS | 87877599 | 87878986 | 87877599 | ID=cds.MS.gene79604.t1;Parent=MS.gene79604.t1 |
| chr7.3 | exon | 87880432 | 87880851 | 87880432 | ID=MS.gene79604.t1.exon3;Parent=MS.gene79604.t1 |
| chr7.3 | CDS | 87880432 | 87880851 | 87880432 | ID=cds.MS.gene79604.t1;Parent=MS.gene79604.t1 |
| chr7.3 | exon | 87881717 | 87881952 | 87881717 | ID=MS.gene79604.t1.exon4;Parent=MS.gene79604.t1 |
| chr7.3 | CDS | 87881717 | 87881952 | 87881717 | ID=cds.MS.gene79604.t1;Parent=MS.gene79604.t1 |
| chr7.3 | exon | 87882591 | 87882845 | 87882591 | ID=MS.gene79604.t1.exon5;Parent=MS.gene79604.t1 |
| chr7.3 | CDS | 87882591 | 87882845 | 87882591 | ID=cds.MS.gene79604.t1;Parent=MS.gene79604.t1 |
| Gene Sequence |
| Protein sequence |
