Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83462.t1 | XP_003612553.1 | 98.1 | 520 | 10 | 0 | 1 | 520 | 54 | 573 | 8.70E-286 | 992.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83462.t1 | F4I9E1 | 56.3 | 515 | 191 | 5 | 1 | 514 | 90 | 571 | 2.0e-153 | 543.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83462.t1 | G7K5G1 | 98.1 | 520 | 10 | 0 | 1 | 520 | 54 | 573 | 6.3e-286 | 992.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene83462 | 0.828904 | 6.94E-55 | -1.69E-46 |
| MS.gene049217 | MS.gene83462 | 0.808234 | 3.42E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene83462 | 0.815004 | 1.15E-51 | -1.69E-46 |
| MS.gene049232 | MS.gene83462 | 0.810599 | 1.06E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene83462 | 0.814626 | 1.40E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene83462 | 0.823174 | 1.60E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene83462 | 0.828978 | 6.66E-55 | -1.69E-46 |
| MS.gene049865 | MS.gene83462 | 0.819622 | 1.05E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene83462 | 0.839828 | 1.25E-57 | -1.69E-46 |
| MS.gene050170 | MS.gene83462 | 0.861404 | 1.05E-63 | -1.69E-46 |
| MS.gene050216 | MS.gene83462 | 0.800454 | 1.43E-48 | -1.69E-46 |
| MS.gene050323 | MS.gene83462 | 0.863926 | 1.76E-64 | -1.69E-46 |
| MS.gene050496 | MS.gene83462 | 0.82873 | 7.64E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene83462 | 0.808342 | 3.25E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene83462 | 0.804308 | 2.30E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene83462 | 0.806979 | 6.32E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene83462 | 0.841609 | 4.28E-58 | -1.69E-46 |
| MS.gene05081 | MS.gene83462 | 0.825137 | 5.52E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene83462 | 0.858877 | 6.09E-63 | -1.69E-46 |
| MS.gene050871 | MS.gene83462 | 0.859805 | 3.21E-63 | -1.69E-46 |
| MS.gene050904 | MS.gene83462 | 0.812014 | 5.25E-51 | -1.69E-46 |
| MS.gene051167 | MS.gene83462 | -0.818094 | 2.34E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene83462 | 0.800218 | 1.60E-48 | -1.69E-46 |
| MS.gene051838 | MS.gene83462 | 0.849571 | 2.97E-60 | -1.69E-46 |
| MS.gene051858 | MS.gene83462 | 0.828774 | 7.46E-55 | -1.69E-46 |
| MS.gene051874 | MS.gene83462 | 0.818173 | 2.25E-52 | -1.69E-46 |
| MS.gene051941 | MS.gene83462 | 0.809316 | 2.01E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene83462 | 0.814495 | 1.50E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene83462 | 0.82883 | 7.23E-55 | -1.69E-46 |
| MS.gene052504 | MS.gene83462 | 0.825242 | 5.22E-54 | -1.69E-46 |
| MS.gene052506 | MS.gene83462 | 0.846874 | 1.65E-59 | -1.69E-46 |
| MS.gene052820 | MS.gene83462 | 0.804586 | 2.01E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene83462 | 0.849282 | 3.58E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene83462 | 0.828469 | 8.84E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene83462 | 0.826121 | 3.23E-54 | -1.69E-46 |
| MS.gene052870 | MS.gene83462 | 0.807259 | 5.52E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene83462 | 0.81325 | 2.81E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene83462 | 0.853703 | 2.01E-61 | -1.69E-46 |
| MS.gene053203 | MS.gene83462 | 0.835529 | 1.59E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene83462 | 0.801558 | 8.51E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene83462 | 0.80361 | 3.21E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene83462 | 0.843192 | 1.63E-58 | -1.69E-46 |
| MS.gene053480 | MS.gene83462 | 0.849405 | 3.30E-60 | -1.69E-46 |
| MS.gene053574 | MS.gene83462 | 0.822619 | 2.15E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene83462 | 0.804669 | 1.93E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene83462 | 0.803831 | 2.89E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene83462 | 0.888345 | 6.41E-73 | -1.69E-46 |
| MS.gene053916 | MS.gene83462 | 0.809496 | 1.84E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene83462 | 0.800642 | 1.31E-48 | -1.69E-46 |
| MS.gene054595 | MS.gene83462 | 0.822682 | 2.08E-53 | -1.69E-46 |
| MS.gene054600 | MS.gene83462 | 0.807524 | 4.85E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene83462 | 0.841789 | 3.84E-58 | -1.69E-46 |
| MS.gene054954 | MS.gene83462 | 0.805931 | 1.05E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene83462 | 0.8 | 1.77E-48 | -1.69E-46 |
| MS.gene055206 | MS.gene83462 | 0.825969 | 3.51E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene83462 | 0.840901 | 6.58E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene83462 | 0.817007 | 4.12E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene83462 | 0.820992 | 5.11E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene83462 | 0.838377 | 2.98E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene83462 | 0.813838 | 2.09E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene83462 | 0.837943 | 3.86E-57 | -1.69E-46 |
| MS.gene055941 | MS.gene83462 | 0.837443 | 5.18E-57 | -1.69E-46 |
| MS.gene056387 | MS.gene83462 | 0.821374 | 4.18E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene83462 | 0.852927 | 3.35E-61 | -1.69E-46 |
| MS.gene056510 | MS.gene83462 | 0.825892 | 3.66E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene83462 | 0.800862 | 1.18E-48 | -1.69E-46 |
| MS.gene056878 | MS.gene83462 | 0.82443 | 8.11E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene83462 | 0.813091 | 3.05E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene83462 | 0.821889 | 3.18E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene83462 | 0.800006 | 1.76E-48 | -1.69E-46 |
| MS.gene057856 | MS.gene83462 | 0.847274 | 1.28E-59 | -1.69E-46 |
| MS.gene057857 | MS.gene83462 | 0.814269 | 1.68E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene83462 | 0.809527 | 1.81E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene83462 | 0.857194 | 1.93E-62 | -1.69E-46 |
| MS.gene058338 | MS.gene83462 | 0.817509 | 3.18E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene83462 | 0.86224 | 5.83E-64 | -1.69E-46 |
| MS.gene058419 | MS.gene83462 | 0.813567 | 2.40E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene83462 | 0.809679 | 1.68E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene83462 | 0.831777 | 1.38E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene83462 | 0.818637 | 1.77E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene83462 | 0.856136 | 3.95E-62 | -1.69E-46 |
| MS.gene059305 | MS.gene83462 | 0.801309 | 9.57E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene83462 | 0.800448 | 1.43E-48 | -1.69E-46 |
| MS.gene059718 | MS.gene83462 | 0.818212 | 2.21E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene83462 | 0.802365 | 5.81E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene83462 | 0.808733 | 2.68E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene83462 | 0.819171 | 1.34E-52 | -1.69E-46 |
| MS.gene06000 | MS.gene83462 | 0.80663 | 7.49E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene83462 | -0.817434 | 3.30E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene83462 | 0.826834 | 2.18E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene83462 | 0.830419 | 2.97E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene83462 | 0.840127 | 1.05E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene83462 | 0.805988 | 1.02E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene83462 | 0.813955 | 1.97E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene83462 | 0.81243 | 4.26E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene83462 | 0.833501 | 5.14E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83462.t1 | MTR_5g026350 | 98.077 | 520 | 10 | 0 | 1 | 520 | 54 | 573 | 0.0 | 1036 |
| MS.gene83462.t1 | MTR_8g071920 | 72.031 | 522 | 140 | 4 | 1 | 519 | 95 | 613 | 0.0 | 706 |
| MS.gene83462.t1 | MTR_7g083660 | 57.253 | 517 | 203 | 6 | 1 | 512 | 54 | 557 | 0.0 | 547 |
| MS.gene83462.t1 | MTR_3g466040 | 35.953 | 509 | 272 | 11 | 2 | 506 | 55 | 513 | 1.20e-84 | 271 |
| MS.gene83462.t1 | MTR_3g466110 | 35.551 | 481 | 249 | 13 | 2 | 475 | 55 | 481 | 4.29e-77 | 251 |
| MS.gene83462.t1 | MTR_4g073690 | 30.333 | 511 | 313 | 12 | 1 | 506 | 62 | 534 | 2.25e-58 | 203 |
| MS.gene83462.t1 | MTR_5g022380 | 31.549 | 523 | 303 | 16 | 1 | 516 | 60 | 534 | 6.51e-51 | 182 |
| MS.gene83462.t1 | MTR_5g022380 | 30.085 | 472 | 277 | 14 | 50 | 516 | 1 | 424 | 3.00e-40 | 150 |
| MS.gene83462.t1 | MTR_4g116210 | 26.792 | 530 | 336 | 15 | 1 | 506 | 58 | 559 | 5.10e-36 | 141 |
| MS.gene83462.t1 | MTR_4g073690 | 29.296 | 355 | 218 | 8 | 1 | 352 | 62 | 386 | 3.30e-35 | 136 |
| MS.gene83462.t1 | MTR_2g450710 | 25.962 | 520 | 346 | 14 | 1 | 506 | 59 | 553 | 1.17e-33 | 134 |
| MS.gene83462.t1 | MTR_7g029015 | 24.340 | 530 | 361 | 13 | 1 | 505 | 62 | 576 | 4.53e-26 | 112 |
| MS.gene83462.t1 | MTR_5g090570 | 30.804 | 224 | 142 | 5 | 294 | 514 | 319 | 532 | 4.69e-22 | 99.8 |
| MS.gene83462.t1 | MTR_3g099150 | 23.063 | 542 | 332 | 16 | 1 | 506 | 62 | 554 | 5.09e-21 | 97.1 |
| MS.gene83462.t1 | MTR_1g111530 | 24.903 | 514 | 339 | 15 | 17 | 516 | 85 | 565 | 6.96e-21 | 96.7 |
| MS.gene83462.t1 | MTR_1g111510 | 24.376 | 521 | 349 | 15 | 9 | 516 | 81 | 569 | 1.02e-20 | 95.9 |
| MS.gene83462.t1 | MTR_1g111550 | 25.333 | 525 | 346 | 14 | 1 | 512 | 72 | 563 | 8.32e-20 | 93.2 |
| MS.gene83462.t1 | MTR_1g111540 | 24.283 | 523 | 347 | 16 | 9 | 516 | 81 | 569 | 1.80e-19 | 92.0 |
| MS.gene83462.t1 | MTR_1g059080 | 23.308 | 532 | 357 | 17 | 1 | 516 | 71 | 567 | 1.77e-18 | 89.0 |
| MS.gene83462.t1 | MTR_7g102880 | 25.379 | 528 | 352 | 16 | 1 | 512 | 76 | 577 | 3.42e-18 | 88.2 |
| MS.gene83462.t1 | MTR_1g050550 | 24.627 | 536 | 354 | 19 | 1 | 516 | 71 | 576 | 4.72e-18 | 87.8 |
| MS.gene83462.t1 | MTR_2g100400 | 22.083 | 480 | 313 | 13 | 39 | 514 | 115 | 537 | 6.62e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83462.t1 | AT5G45275 | 64.162 | 519 | 175 | 3 | 1 | 515 | 54 | 565 | 0.0 | 640 |
| MS.gene83462.t1 | AT4G19450 | 62.715 | 523 | 180 | 4 | 1 | 516 | 54 | 568 | 0.0 | 627 |
| MS.gene83462.t1 | AT1G31470 | 55.922 | 515 | 193 | 6 | 1 | 514 | 90 | 571 | 0.0 | 533 |
| MS.gene83462.t1 | AT3G01630 | 50.672 | 521 | 210 | 11 | 1 | 513 | 70 | 551 | 1.51e-166 | 483 |
| MS.gene83462.t1 | AT3G01630 | 50.672 | 521 | 210 | 11 | 1 | 513 | 88 | 569 | 4.86e-166 | 482 |
| MS.gene83462.t1 | AT4G19450 | 61.096 | 365 | 130 | 3 | 1 | 358 | 54 | 413 | 2.10e-150 | 437 |
| MS.gene83462.t1 | AT2G30300 | 32.812 | 512 | 268 | 12 | 2 | 506 | 55 | 497 | 5.66e-62 | 211 |
| MS.gene83462.t1 | AT4G34950 | 30.528 | 511 | 326 | 15 | 1 | 505 | 63 | 550 | 2.22e-57 | 201 |
| MS.gene83462.t1 | AT2G16660 | 30.137 | 511 | 309 | 14 | 1 | 505 | 61 | 529 | 3.00e-53 | 189 |
| MS.gene83462.t1 | AT5G50520 | 25.912 | 521 | 333 | 15 | 1 | 514 | 64 | 538 | 2.40e-30 | 124 |
| MS.gene83462.t1 | AT5G50630 | 25.912 | 521 | 333 | 15 | 1 | 514 | 64 | 538 | 2.40e-30 | 124 |
| MS.gene83462.t1 | AT2G16660 | 28.571 | 364 | 221 | 11 | 1 | 359 | 61 | 390 | 3.86e-30 | 122 |
| MS.gene83462.t1 | AT1G80530 | 26.481 | 540 | 308 | 20 | 1 | 506 | 60 | 544 | 2.23e-29 | 122 |
| MS.gene83462.t1 | AT2G28120 | 24.335 | 526 | 358 | 12 | 1 | 516 | 64 | 559 | 1.11e-28 | 120 |
| MS.gene83462.t1 | AT2G39210 | 24.624 | 532 | 346 | 16 | 1 | 512 | 68 | 564 | 7.64e-26 | 112 |
| MS.gene83462.t1 | AT5G14120 | 24.953 | 529 | 352 | 14 | 1 | 505 | 63 | 570 | 8.16e-24 | 105 |
| MS.gene83462.t1 | AT3G01930 | 24.717 | 530 | 357 | 13 | 1 | 505 | 63 | 575 | 3.18e-22 | 100 |
| MS.gene83462.t1 | AT3G01930 | 25.107 | 466 | 308 | 12 | 64 | 505 | 14 | 462 | 1.56e-18 | 89.0 |
| MS.gene83462.t1 | AT1G74780 | 29.185 | 233 | 150 | 7 | 277 | 505 | 301 | 522 | 1.34e-16 | 83.2 |
| MS.gene83462.t1 | AT2G34355 | 26.271 | 236 | 162 | 5 | 279 | 512 | 145 | 370 | 1.45e-14 | 75.9 |
| MS.gene83462.t1 | AT1G18940 | 27.869 | 244 | 151 | 10 | 280 | 512 | 296 | 525 | 2.63e-14 | 75.9 |
| MS.gene83462.t1 | AT2G34355 | 26.271 | 236 | 162 | 5 | 279 | 512 | 295 | 520 | 4.40e-14 | 75.1 |
| MS.gene83462.t1 | AT2G34350 | 26.860 | 242 | 157 | 7 | 278 | 513 | 296 | 523 | 1.98e-13 | 73.2 |
| MS.gene83462.t1 | AT2G34350 | 26.860 | 242 | 157 | 7 | 278 | 513 | 296 | 523 | 1.98e-13 | 73.2 |
Find 102 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTCATCGTTCTCCTTCTT+TGG | 0.217397 | 5.4:+17310510 | MS.gene83462:CDS |
| AAAGTGTTTGGTTGGTCTTC+TGG | 0.219575 | 5.4:+17305132 | MS.gene83462:CDS |
| CCCAATTGCATTCATCTTGC+TGG | 0.229813 | 5.4:+17310747 | MS.gene83462:CDS |
| ATCCCTTCTCTATGGTTTCA+TGG | 0.233016 | 5.4:+17310930 | MS.gene83462:CDS |
| GAAGAGGGACAAGGGCATTT+AGG | 0.272558 | 5.4:-17309840 | None:intergenic |
| TGGGACGGCAATGCTATTTC+TGG | 0.278696 | 5.4:+17311031 | MS.gene83462:CDS |
| TCAATGGGTCTTGTTGGTTA+TGG | 0.299224 | 5.4:+17305204 | MS.gene83462:CDS |
| CATGTTTATTGCTGCTTCAA+TGG | 0.301959 | 5.4:+17305188 | MS.gene83462:CDS |
| CCAATTGGATCCCTTCTCTA+TGG | 0.305725 | 5.4:+17310922 | MS.gene83462:CDS |
| ATTATTATGTTTCCATTTCC+AGG | 0.322761 | 5.4:-17310988 | None:intergenic |
| AAGGAAGGTACCAGAAAATA+AGG | 0.329614 | 5.4:-17305264 | None:intergenic |
| CTTGTTTACAGCAATAATCT+TGG | 0.332047 | 5.4:+17310432 | MS.gene83462:CDS |
| AACGCTAAGGATCTGTTAAC+TGG | 0.332085 | 5.4:-17309724 | None:intergenic |
| ATCTTGCCGTTATGTATTCC+TGG | 0.337289 | 5.4:+17310072 | MS.gene83462:CDS |
| GCCGTTACATCTGAGCTCTT+TGG | 0.350791 | 5.4:+17310853 | MS.gene83462:CDS |
| AAAACAATCATAAGCATGTT+TGG | 0.355071 | 5.4:-17311121 | None:intergenic |
| GGACAGATAGCTCAATCTTT+AGG | 0.355909 | 5.4:+17310453 | MS.gene83462:CDS |
| CTCATAACAAATATTCCAAT+TGG | 0.383465 | 5.4:+17310907 | MS.gene83462:CDS |
| CTGCTTGGTGAAAACGGATA+TGG | 0.383934 | 5.4:+17310252 | MS.gene83462:CDS |
| GCCAGCAAGATGAATGCAAT+TGG | 0.384601 | 5.4:-17310748 | None:intergenic |
| ATGTTTATTGCTGCTTCAAT+GGG | 0.387895 | 5.4:+17305189 | MS.gene83462:CDS |
| GCTGCTTCAATGGGTCTTGT+TGG | 0.391680 | 5.4:+17305198 | MS.gene83462:CDS |
| GCTATCTCAGCACCTGGAAA+TGG | 0.394685 | 5.4:+17310976 | MS.gene83462:CDS |
| TACTTCTGCGGAGGTACAAT+TGG | 0.409964 | 5.4:+17310408 | MS.gene83462:CDS |
| CAGCCGCGGTTCTTGTGAAA+AGG | 0.416501 | 5.4:+17310358 | MS.gene83462:CDS |
| AAGTTCTACTTTGCAAGGAC+AGG | 0.418566 | 5.4:+17310697 | MS.gene83462:CDS |
| GCTATTTCTGGACATTTGTA+TGG | 0.429375 | 5.4:+17311043 | MS.gene83462:CDS |
| GCAGGATCAATTGGAAATGC+TGG | 0.431793 | 5.4:+17310323 | MS.gene83462:CDS |
| CCAGCAAGATGAATGCAATT+GGG | 0.438820 | 5.4:-17310747 | None:intergenic |
| TTTCTGGACATTTGTATGGT+GGG | 0.453355 | 5.4:+17311047 | MS.gene83462:CDS |
| GCGTTATATATGCTAGAGAT+TGG | 0.453912 | 5.4:+17310094 | MS.gene83462:CDS |
| ATAAACATGACAAGAGAGAT+TGG | 0.454947 | 5.4:-17305174 | None:intergenic |
| GCACTCACTGTGAGTTTCAA+TGG | 0.459327 | 5.4:+17309748 | MS.gene83462:CDS |
| AATGTAGGAACTGCACTAAT+CGG | 0.461447 | 5.4:+17310796 | MS.gene83462:CDS |
| CAAGGTCTGCTTGGTGAAAA+CGG | 0.464458 | 5.4:+17310246 | MS.gene83462:CDS |
| TGGGGATGTATATCTGTCAT+AGG | 0.465322 | 5.4:+17311066 | MS.gene83462:CDS |
| ACTTACTTTCGAATGTAGTC+AGG | 0.465887 | 5.4:-17310552 | None:intergenic |
| CAGTCGGTTGCGCTGAAATA+CGG | 0.476009 | 5.4:-17311152 | None:intergenic |
| AGATAGAGTTGATCTGATGA+AGG | 0.476307 | 5.4:-17309814 | None:intergenic |
| ACATCAAGGCTTTACTTTGG+TGG | 0.477843 | 5.4:+17310033 | MS.gene83462:CDS |
| AAAGGCGGTTGGCGAAGAAT+CGG | 0.485100 | 5.4:-17309886 | None:intergenic |
| TGAAAGCAGGCGTCCAAAGA+AGG | 0.489358 | 5.4:-17310523 | None:intergenic |
| GGAGAATGAGTGTCTGATAA+AGG | 0.489819 | 5.4:-17309904 | None:intergenic |
| CCATAGAGAAGGGATCCAAT+TGG | 0.490493 | 5.4:-17310922 | None:intergenic |
| CAAAGCAGCGCTCGGAGCAA+TGG | 0.493468 | 5.4:+17310216 | MS.gene83462:CDS |
| GCAACATCAAGGCTTTACTT+TGG | 0.496044 | 5.4:+17310030 | MS.gene83462:CDS |
| AGTGACATGGGTAAAGTGTT+TGG | 0.497761 | 5.4:+17305120 | None:intergenic |
| TTCTGGACATTTGTATGGTG+GGG | 0.499270 | 5.4:+17311048 | MS.gene83462:CDS |
| CGCGGTTCTTGTGAAAAGGT+TGG | 0.500230 | 5.4:+17310362 | MS.gene83462:CDS |
| GTCTGATTCATTAGTGTGCA+TGG | 0.507089 | 5.4:+17311011 | MS.gene83462:CDS |
| GCACTAATCGGTCTGAGCTC+AGG | 0.513327 | 5.4:+17310808 | MS.gene83462:CDS |
| TGAGTGGTTGCAGTATCTGT+TGG | 0.528360 | 5.4:+17309662 | MS.gene83462:CDS |
| GAGCGCTGCTTTGACGCGTA+AGG | 0.529395 | 5.4:-17310206 | None:intergenic |
| GCAGGAAGTTCTACTTTGCA+AGG | 0.530474 | 5.4:+17310692 | MS.gene83462:intron |
| TATTATATTGCATACTTCTG+CGG | 0.537599 | 5.4:+17310396 | MS.gene83462:CDS |
| GATAGAGTTGATCTGATGAA+GGG | 0.542870 | 5.4:-17309813 | None:intergenic |
| TCTCTAGCATATATAACGCC+AGG | 0.544660 | 5.4:-17310090 | None:intergenic |
| GGAGATGCTCAAGGTCTGCT+TGG | 0.546915 | 5.4:+17310237 | MS.gene83462:CDS |
| AAGTTGATGAGGCAAAGATA+AGG | 0.550815 | 5.4:-17309999 | None:intergenic |
| GGCTTCATCTGAAAGTGCTA+TGG | 0.552373 | 5.4:+17310768 | MS.gene83462:CDS |
| CACAGTGAGTGCCAACGCTA+AGG | 0.553873 | 5.4:-17309737 | None:intergenic |
| ATTTCTGGACATTTGTATGG+TGG | 0.553978 | 5.4:+17311046 | MS.gene83462:CDS |
| TTTCATATTTGCAGCTGCAG+TGG | 0.554888 | 5.4:+17310831 | MS.gene83462:CDS |
| TGATTGACACTCAAACTGTC+GGG | 0.557476 | 5.4:-17310877 | None:intergenic |
| CGAAGTGAGAAGAGGGACAA+GGG | 0.560371 | 5.4:-17309848 | None:intergenic |
| TTACGCGTCAAAGCAGCGCT+CGG | 0.560674 | 5.4:+17310208 | MS.gene83462:CDS |
| CAGGATCAATTGGAAATGCT+GGG | 0.562484 | 5.4:+17310324 | MS.gene83462:CDS |
| TCCAAAGAGCTCAGATGTAA+CGG | 0.563002 | 5.4:-17310854 | None:intergenic |
| AAGATGAATGCAATTGGGGT+TGG | 0.563489 | 5.4:-17310742 | None:intergenic |
| AGTGCTATGGCACTTAATGT+AGG | 0.563642 | 5.4:+17310781 | MS.gene83462:CDS |
| CTTCTGATGAAGCAACATCA+AGG | 0.571720 | 5.4:+17310019 | MS.gene83462:CDS |
| CTGCGAGCGAAGTGAGAAGA+GGG | 0.581355 | 5.4:-17309855 | None:intergenic |
| GCGAAGTGAGAAGAGGGACA+AGG | 0.583886 | 5.4:-17309849 | None:intergenic |
| CAGCCATGAAACCATAGAGA+AGG | 0.585536 | 5.4:-17310933 | None:intergenic |
| CAGCAAGATGAATGCAATTG+GGG | 0.585987 | 5.4:-17310746 | None:intergenic |
| AGTTCTACTTTGCAAGGACA+GGG | 0.588322 | 5.4:+17310698 | MS.gene83462:CDS |
| ACATGCCGCTCGTCAGAACT+CGG | 0.589916 | 5.4:+17309927 | MS.gene83462:CDS |
| AGTCAGGCATAGCTGAAAGC+AGG | 0.592721 | 5.4:-17310536 | None:intergenic |
| TGGGGTTGGTAAAAGTGCAA+TGG | 0.599533 | 5.4:-17310728 | None:intergenic |
| GCTAATGCTATCTCAGCACC+TGG | 0.600408 | 5.4:+17310970 | MS.gene83462:CDS |
| CGGAGCAATGGAGATGCTCA+AGG | 0.604999 | 5.4:+17310228 | MS.gene83462:CDS |
| ACATGGGTAAAGTGTTTGGT+TGG | 0.605679 | 5.4:+17305124 | None:intergenic |
| GAGTTCTGACGAGCGGCATG+TGG | 0.606419 | 5.4:-17309925 | None:intergenic |
| ATTCATTAGTGTGCATGGGA+CGG | 0.608695 | 5.4:+17311016 | MS.gene83462:CDS |
| TGCTTCATCAGAAGTTGATG+AGG | 0.612975 | 5.4:-17310010 | None:intergenic |
| AGTTAACAGATCCTTAGCGT+TGG | 0.614816 | 5.4:+17309726 | MS.gene83462:CDS |
| GTGATTGACACTCAAACTGT+CGG | 0.614996 | 5.4:-17310878 | None:intergenic |
| GAGTCGACGTTCTATAACTG+TGG | 0.628807 | 5.4:-17310476 | None:intergenic |
| ATAACGCCAGGAATACATAA+CGG | 0.628871 | 5.4:-17310078 | None:intergenic |
| AGCCATGAAACCATAGAGAA+GGG | 0.633768 | 5.4:-17310932 | None:intergenic |
| TATATTGCATACTTCTGCGG+AGG | 0.634986 | 5.4:+17310399 | MS.gene83462:CDS |
| GCTGCGAGCGAAGTGAGAAG+AGG | 0.636097 | 5.4:-17309856 | None:intergenic |
| ACGCTAAGGATCTGTTAACT+GGG | 0.636801 | 5.4:-17309723 | None:intergenic |
| GAGTGTCTGATAAAGGCGGT+TGG | 0.638280 | 5.4:-17309897 | None:intergenic |
| GTCAGAAGTTAAGACACAGT+CGG | 0.643515 | 5.4:-17311168 | None:intergenic |
| TCTGATTCATTAGTGTGCAT+GGG | 0.646463 | 5.4:+17311012 | MS.gene83462:CDS |
| AAGAGTAGTGATGTGAATTG+TGG | 0.658679 | 5.4:+17310288 | MS.gene83462:CDS |
| TCTACTTTGCAAGGACAGGG+TGG | 0.676179 | 5.4:+17310701 | MS.gene83462:CDS |
| GGGAGAAGAACATTCAGCCG+CGG | 0.691345 | 5.4:+17310344 | MS.gene83462:CDS |
| TATAACCGAGTTCTGACGAG+CGG | 0.712307 | 5.4:-17309932 | None:intergenic |
| GAATGAGTGTCTGATAAAGG+CGG | 0.762249 | 5.4:-17309901 | None:intergenic |
| GAAGGCTCGGATGAACAGCG+CGG | 0.798034 | 5.4:-17310122 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTTTTTAATTTAT+GGG | - | chr5.4:17305599-17305618 | None:intergenic | 0.0% |
| !!! | TAAATATTTTTTTTAATTTA+TGG | - | chr5.4:17305600-17305619 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTTTTTTTTTTTT+AGG | - | chr5.4:17308600-17308619 | None:intergenic | 0.0% |
| !! | AAAAAATTGAAAAAAAATTC+TGG | + | chr5.4:17306536-17306555 | MS.gene83462:intron | 10.0% |
| !! | TAAAAAAGATTAAAAAATTC+TGG | + | chr5.4:17306677-17306696 | MS.gene83462:intron | 10.0% |
| !!! | AAAAATAAGAGTAAAATTTT+AGG | + | chr5.4:17306227-17306246 | MS.gene83462:intron | 10.0% |
| !!! | AAAAATGAATATTTTTTGAA+AGG | + | chr5.4:17305958-17305977 | MS.gene83462:intron | 10.0% |
| !!! | AATGATAAAGAATATTTTAA+AGG | - | chr5.4:17305793-17305812 | None:intergenic | 10.0% |
| !!! | CATTATCATTATTTTTTAAT+AGG | - | chr5.4:17308860-17308879 | None:intergenic | 10.0% |
| !!! | TTAAAATATTCTTTTTTTGA+TGG | + | chr5.4:17305759-17305778 | MS.gene83462:intron | 10.0% |
| !!! | TTCTAAAAAAATTAAAATTC+TGG | + | chr5.4:17306721-17306740 | MS.gene83462:intron | 10.0% |
| !! | GAAAAAAATTGAAAAAATTC+TGG | - | chr5.4:17307373-17307392 | None:intergenic | 15.0% |
| !! | TAAAAATTAGTAATTACGTA+GGG | + | chr5.4:17305430-17305449 | MS.gene83462:intron | 15.0% |
| !! | TTAAAAATTAGTAATTACGT+AGG | + | chr5.4:17305429-17305448 | MS.gene83462:intron | 15.0% |
| !!! | AAGAACTTGTTTTTTTATTT+TGG | - | chr5.4:17309501-17309520 | None:intergenic | 15.0% |
| !!! | ATTTTCATTAGTATTTTTTC+CGG | + | chr5.4:17306973-17306992 | MS.gene83462:intron | 15.0% |
| !!! | ATTTTTGTGTATTTATAAAC+CGG | + | chr5.4:17306880-17306899 | MS.gene83462:intron | 15.0% |
| !!! | CGAATATATTTTCAAAAAAT+TGG | - | chr5.4:17306010-17306029 | None:intergenic | 15.0% |
| !!! | CTTATTTTTATTCAGAAAAT+AGG | - | chr5.4:17306216-17306235 | None:intergenic | 15.0% |
| !!! | TATTTTTTAATAGGTTAAGT+TGG | - | chr5.4:17308851-17308870 | None:intergenic | 15.0% |
| !!! | TTTTTAATTTTTCATGTTCA+GGG | - | chr5.4:17306457-17306476 | None:intergenic | 15.0% |
| !!! | TTTTTTAATTTTTCATGTTC+AGG | - | chr5.4:17306458-17306477 | None:intergenic | 15.0% |
| !! | AAACTGAAATGAGAAATATA+GGG | - | chr5.4:17305298-17305317 | None:intergenic | 20.0% |
| !! | AATTATTAAGTAACCACTAT+TGG | + | chr5.4:17305386-17305405 | MS.gene83462:intron | 20.0% |
| !! | CATCTATGTTAGTATTTATA+TGG | - | chr5.4:17309208-17309227 | None:intergenic | 20.0% |
| !! | CGAAAATAAAAATGAAATTC+TGG | + | chr5.4:17306792-17306811 | MS.gene83462:intron | 20.0% |
| !! | CTGAAAAAATTTGAAAAATC+TGG | + | chr5.4:17306591-17306610 | MS.gene83462:intron | 20.0% |
| !! | CTTTCTATTAGGATTATTTA+GGG | + | chr5.4:17308454-17308473 | MS.gene83462:intron | 20.0% |
| !! | GAAAAAGAATGAAAAAATTC+TGG | - | chr5.4:17307119-17307138 | None:intergenic | 20.0% |
| !! | GGGAAAAAATTAAAAAAATC+TGG | - | chr5.4:17307234-17307253 | None:intergenic | 20.0% |
| !! | TATAAATACACAAAAATTCC+CGG | - | chr5.4:17306877-17306896 | None:intergenic | 20.0% |
| !! | TATTTATAAACCGAGAATAA+GGG | + | chr5.4:17306889-17306908 | MS.gene83462:intron | 20.0% |
| !! | TCTTTCTATTAGGATTATTT+AGG | + | chr5.4:17308453-17308472 | MS.gene83462:intron | 20.0% |
| !!! | AATCATATAAGGTTTTGAAT+TGG | - | chr5.4:17308348-17308367 | None:intergenic | 20.0% |
| !!! | AGTATTTCTCAAAAATTTTC+CGG | + | chr5.4:17306855-17306874 | MS.gene83462:intron | 20.0% |
| !!! | ATTTTTCTGTTAACTGTTTA+CGG | + | chr5.4:17306383-17306402 | MS.gene83462:intron | 20.0% |
| !!! | ATTTTTCTGTTAACTGTTTA+CGG | - | chr5.4:17306402-17306383 | None:intergenic | 20.0% |
| !!! | CAAAAAGCTTTTAATAATAG+TGG | + | chr5.4:17305707-17305726 | MS.gene83462:intron | 20.0% |
| !!! | CAAGTTCTTAGTTTTATTAT+AGG | + | chr5.4:17309512-17309531 | MS.gene83462:intron | 20.0% |
| !!! | CTTCATATTTTTTTGTAATC+TGG | + | chr5.4:17308383-17308402 | MS.gene83462:intron | 20.0% |
| !!! | TTCAATTTTTTTCAAGTTCA+GGG | + | chr5.4:17307380-17307399 | MS.gene83462:intron | 20.0% |
| !!! | TTTCAATTTTTTTCAAGTTC+AGG | + | chr5.4:17307379-17307398 | MS.gene83462:intron | 20.0% |
| !!! | TTTCTTATGTTTTGAATGAA+TGG | + | chr5.4:17306186-17306205 | MS.gene83462:intron | 20.0% |
| !!! | TTTTAATTTTTCATGTTCAG+GGG | - | chr5.4:17306456-17306475 | None:intergenic | 20.0% |
| !!! | TTTTCATTAGTATTTTTTCC+GGG | + | chr5.4:17306974-17306993 | MS.gene83462:intron | 20.0% |
| !!! | TTTTTGTGTATTTATAAACC+GGG | + | chr5.4:17306881-17306900 | MS.gene83462:intron | 20.0% |
| ! | AAAACAATCATAAGCATGTT+TGG | - | chr5.4:17311124-17311143 | None:intergenic | 25.0% |
| ! | AAATGAGAAATATAGGGTAA+AGG | - | chr5.4:17305292-17305311 | None:intergenic | 25.0% |
| ! | ACAGTTAACAGAAAAATTGA+CGG | + | chr5.4:17307456-17307475 | MS.gene83462:intron | 25.0% |
| ! | ACAGTTAACAGAAAAATTGA+CGG | - | chr5.4:17307475-17307456 | None:intergenic | 25.0% |
| ! | ACATAAGTGTAAAATTTCAG+GGG | + | chr5.4:17307413-17307432 | MS.gene83462:intron | 25.0% |
| ! | ACATAAGTGTAAAATTTCAG+GGG | - | chr5.4:17307432-17307413 | None:intergenic | 25.0% |
| ! | ATAAATACACAAAAAGTTCC+CGG | - | chr5.4:17307020-17307039 | None:intergenic | 25.0% |
| ! | ATACATAAAAAACCTAAGCT+CGG | - | chr5.4:17306937-17306956 | None:intergenic | 25.0% |
| ! | ATCGATGAAACTTACAATTT+CGG | + | chr5.4:17307548-17307567 | MS.gene83462:intron | 25.0% |
| ! | ATTAACGTTATGCAATTTCA+GGG | + | chr5.4:17307492-17307511 | MS.gene83462:intron | 25.0% |
| ! | ATTAACGTTATGCAATTTCA+GGG | - | chr5.4:17307511-17307492 | None:intergenic | 25.0% |
| ! | ATTATTATGTTTCCATTTCC+AGG | - | chr5.4:17310991-17311010 | None:intergenic | 25.0% |
| ! | ATTGATGAAGCTTACAATTT+CGG | - | chr5.4:17306288-17306307 | None:intergenic | 25.0% |
| ! | CAAAACCTTATATGATTCTA+TGG | + | chr5.4:17308351-17308370 | MS.gene83462:intron | 25.0% |
| ! | CACATAAGTGTAAAATTTCA+GGG | + | chr5.4:17307412-17307431 | MS.gene83462:intron | 25.0% |
| ! | CACATAAGTGTAAAATTTCA+GGG | - | chr5.4:17307431-17307412 | None:intergenic | 25.0% |
| ! | CTCATAACAAATATTCCAAT+TGG | + | chr5.4:17310907-17310926 | MS.gene83462:CDS | 25.0% |
| ! | CTGATATAAACGAAAAAAAC+TGG | + | chr5.4:17310593-17310612 | MS.gene83462:intron | 25.0% |
| ! | GAAACTGAAATGAGAAATAT+AGG | - | chr5.4:17305299-17305318 | None:intergenic | 25.0% |
| ! | GTATTTATAAACCGAGAATA+AGG | + | chr5.4:17306888-17306907 | MS.gene83462:intron | 25.0% |
| ! | TATTATATTGCATACTTCTG+CGG | + | chr5.4:17310396-17310415 | MS.gene83462:CDS | 25.0% |
| ! | TCATAAGCTTCTGAATTATA+GGG | + | chr5.4:17308948-17308967 | MS.gene83462:intron | 25.0% |
| ! | TCGAAACATTACTATTTGAA+AGG | + | chr5.4:17309347-17309366 | MS.gene83462:intron | 25.0% |
| ! | TTCATAAGCTTCTGAATTAT+AGG | + | chr5.4:17308947-17308966 | MS.gene83462:intron | 25.0% |
| ! | TTTATCTCTCGATCTTAATT+TGG | - | chr5.4:17308992-17309011 | None:intergenic | 25.0% |
| !! | GAGACTAAGAGTAAATTTTT+CGG | + | chr5.4:17310664-17310683 | MS.gene83462:intron | 25.0% |
| !! | GTATTGTATTATTCCCTTTT+GGG | + | chr5.4:17308498-17308517 | MS.gene83462:intron | 25.0% |
| !! | GTATTTCTCAAAAATTTTCC+GGG | + | chr5.4:17306856-17306875 | MS.gene83462:intron | 25.0% |
| !! | TATTAGGATTATTTAGGGTA+GGG | + | chr5.4:17308459-17308478 | MS.gene83462:intron | 25.0% |
| !! | TCTAACATTGAACATTTTAG+CGG | + | chr5.4:17309957-17309976 | MS.gene83462:CDS | 25.0% |
| !! | TGTATTGTATTATTCCCTTT+TGG | + | chr5.4:17308497-17308516 | MS.gene83462:intron | 25.0% |
| !! | TTACAAAAGCACAATTGAAA+AGG | - | chr5.4:17308651-17308670 | None:intergenic | 25.0% |
| !!! | AGCTTTGAATTTTATGTTTC+AGG | + | chr5.4:17309621-17309640 | MS.gene83462:intron | 25.0% |
| !!! | CATATTTTTTCCCTTATTCT+CGG | - | chr5.4:17306902-17306921 | None:intergenic | 25.0% |
| !!! | GTGTATTTTTTCCTTATTCT+CGG | - | chr5.4:17307046-17307065 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTTCAAGTTCAG+GGG | + | chr5.4:17307381-17307400 | MS.gene83462:intron | 25.0% |
| !!! | TTTAATTTTTCATGTTCAGG+GGG | - | chr5.4:17306455-17306474 | None:intergenic | 25.0% |
| AAAATAGCATACACCAATAG+TGG | - | chr5.4:17305402-17305421 | None:intergenic | 30.0% | |
| AAGAATATACTAGTACTAGG+AGG | + | chr5.4:17306030-17306049 | MS.gene83462:intron | 30.0% | |
| AAGATGTAGATACTGTGTAT+GGG | + | chr5.4:17307624-17307643 | MS.gene83462:intron | 30.0% | |
| AAGTGGAAAAGAGAAGATTA+AGG | + | chr5.4:17305930-17305949 | MS.gene83462:intron | 30.0% | |
| AGATAAAGAGATACAGAGAT+TGG | - | chr5.4:17308552-17308571 | None:intergenic | 30.0% | |
| AGGAACAATGCACTTATAAT+GGG | + | chr5.4:17306050-17306069 | MS.gene83462:intron | 30.0% | |
| ATAAACATGACAAGAGAGAT+TGG | - | chr5.4:17305177-17305196 | None:intergenic | 30.0% | |
| ATAAAGAGATACAGAGATTG+GGG | - | chr5.4:17308550-17308569 | None:intergenic | 30.0% | |
| ATAAGTGTAAAATTTCAGGG+GGG | - | chr5.4:17307434-17307415 | None:intergenic | 30.0% | |
| ATTGATGTTTCGTTAACTAC+AGG | + | chr5.4:17307520-17307539 | MS.gene83462:intron | 30.0% | |
| ATTGATGTTTCGTTAACTAC+AGG | - | chr5.4:17307539-17307520 | None:intergenic | 30.0% | |
| CATAAGTGTAAAATTTCAGG+GGG | + | chr5.4:17307414-17307433 | MS.gene83462:intron | 30.0% | |
| CATAAGTGTAAAATTTCAGG+GGG | - | chr5.4:17307433-17307414 | None:intergenic | 30.0% | |
| CTTGTTTACAGCAATAATCT+TGG | + | chr5.4:17310432-17310451 | MS.gene83462:CDS | 30.0% | |
| GAAATATAGGGTAAAGGAAA+AGG | - | chr5.4:17305286-17305305 | None:intergenic | 30.0% | |
| GATAAAGAGATACAGAGATT+GGG | - | chr5.4:17308551-17308570 | None:intergenic | 30.0% | |
| GATTAACGTTATGCAATTTC+AGG | + | chr5.4:17307491-17307510 | MS.gene83462:intron | 30.0% | |
| GATTAACGTTATGCAATTTC+AGG | - | chr5.4:17307510-17307491 | None:intergenic | 30.0% | |
| GCACATAAGTGTAAAATTTC+AGG | + | chr5.4:17307411-17307430 | MS.gene83462:intron | 30.0% | |
| GCACATAAGTGTAAAATTTC+AGG | - | chr5.4:17307430-17307411 | None:intergenic | 30.0% | |
| TCGAAGAATATACTAGTACT+AGG | + | chr5.4:17306027-17306046 | MS.gene83462:intron | 30.0% | |
| TCGATGAAACTTACAATTTC+GGG | + | chr5.4:17307549-17307568 | MS.gene83462:intron | 30.0% | |
| TGCATCCATAGAATCATATA+AGG | - | chr5.4:17308359-17308378 | None:intergenic | 30.0% | |
| TGTATTTATAAACCGAGCTT+AGG | + | chr5.4:17306922-17306941 | MS.gene83462:intron | 30.0% | |
| TTAACAGAAAAATTGACGGA+GGG | + | chr5.4:17307460-17307479 | MS.gene83462:intron | 30.0% | |
| TTAACAGAAAAATTGACGGA+GGG | - | chr5.4:17307479-17307460 | None:intergenic | 30.0% | |
| TTAACGTTATGCAATTTCAG+GGG | + | chr5.4:17307493-17307512 | MS.gene83462:intron | 30.0% | |
| TTAACGTTATGCAATTTCAG+GGG | - | chr5.4:17307512-17307493 | None:intergenic | 30.0% | |
| TTACTATTTGAAAGGACTCT+AGG | + | chr5.4:17309355-17309374 | MS.gene83462:intron | 30.0% | |
| TTAGTATATATGTCGAGCTT+AGG | - | chr5.4:17307077-17307096 | None:intergenic | 30.0% | |
| TTGATGAAGCTTACAATTTC+GGG | - | chr5.4:17306287-17306306 | None:intergenic | 30.0% | |
| TTGATGTTTCGTTAACTACA+GGG | + | chr5.4:17307521-17307540 | MS.gene83462:intron | 30.0% | |
| TTGATGTTTCGTTAACTACA+GGG | - | chr5.4:17307540-17307521 | None:intergenic | 30.0% | |
| ! | AAGTTAGTTATCGACTGAAT+AGG | - | chr5.4:17307583-17307602 | None:intergenic | 30.0% |
| ! | ATAGATGTCTGAGTTTTCAA+GGG | + | chr5.4:17309221-17309240 | MS.gene83462:intron | 30.0% |
| ! | ATGTTTATTGCTGCTTCAAT+GGG | + | chr5.4:17305189-17305208 | MS.gene83462:CDS | 30.0% |
| ! | CTATTAGGATTATTTAGGGT+AGG | + | chr5.4:17308458-17308477 | MS.gene83462:intron | 30.0% |
| ! | TTGTGAAAAGGTTGGATTTT+TGG | + | chr5.4:17310370-17310389 | MS.gene83462:CDS | 30.0% |
| ! | TTTTGTAATGTACGTTCAAC+TGG | + | chr5.4:17308663-17308682 | MS.gene83462:intron | 30.0% |
| !! | AACATTTTAGCGGTTTTTAC+AGG | + | chr5.4:17309967-17309986 | MS.gene83462:CDS | 30.0% |
| !! | ACTTTGAGTAGTTTTTGAAG+TGG | + | chr5.4:17305913-17305932 | MS.gene83462:intron | 30.0% |
| !! | GTAAATTTTTCGGTATTTGC+AGG | + | chr5.4:17310674-17310693 | MS.gene83462:intron | 30.0% |
| !!! | CAATTTTTTTCAAGTTCAGG+GGG | + | chr5.4:17307382-17307401 | MS.gene83462:intron | 30.0% |
| !!! | TAAGGTTTTGAATTGGTGAA+TGG | - | chr5.4:17308341-17308360 | None:intergenic | 30.0% |
| !!! | TGAATTGTGGCAAGTTTTTT+GGG | + | chr5.4:17310301-17310320 | MS.gene83462:CDS | 30.0% |
| AACACCAAGTGATCAGAAAA+GGG | - | chr5.4:17307682-17307701 | None:intergenic | 35.0% | |
| AAGAGTAGTGATGTGAATTG+TGG | + | chr5.4:17310288-17310307 | MS.gene83462:CDS | 35.0% | |
| AATGTAGGAACTGCACTAAT+CGG | + | chr5.4:17310796-17310815 | MS.gene83462:CDS | 35.0% | |
| ACACAGTATCTACATCTTGA+TGG | - | chr5.4:17307622-17307641 | None:intergenic | 35.0% | |
| ACTTACTTTCGAATGTAGTC+AGG | - | chr5.4:17310555-17310574 | None:intergenic | 35.0% | |
| AGGGTTGCATATATATATGG+AGG | + | chr5.4:17305449-17305468 | MS.gene83462:intron | 35.0% | |
| ATAACGCCAGGAATACATAA+CGG | - | chr5.4:17310081-17310100 | None:intergenic | 35.0% | |
| CAAGATGTAGATACTGTGTA+TGG | + | chr5.4:17307623-17307642 | MS.gene83462:intron | 35.0% | |
| CAATGACTGAGATGGATAAT+AGG | - | chr5.4:17308217-17308236 | None:intergenic | 35.0% | |
| CAGAAAAGAAACCAGATCAA+CGG | - | chr5.4:17307944-17307963 | None:intergenic | 35.0% | |
| CGATGAAACTTACAATTTCG+GGG | + | chr5.4:17307550-17307569 | MS.gene83462:intron | 35.0% | |
| CGTAGGGTTGCATATATATA+TGG | + | chr5.4:17305446-17305465 | MS.gene83462:intron | 35.0% | |
| GAGGAACAATGCACTTATAA+TGG | + | chr5.4:17306049-17306068 | MS.gene83462:intron | 35.0% | |
| GATGAAACTTACAATTTCGG+GGG | + | chr5.4:17307551-17307570 | MS.gene83462:intron | 35.0% | |
| GATGGATAATAGGTTAGAAC+CGG | - | chr5.4:17308207-17308226 | None:intergenic | 35.0% | |
| GCGTTATATATGCTAGAGAT+TGG | + | chr5.4:17310094-17310113 | MS.gene83462:CDS | 35.0% | |
| GGGTTGCATATATATATGGA+GGG | + | chr5.4:17305450-17305469 | MS.gene83462:intron | 35.0% | |
| GGTTGCATATATATATGGAG+GGG | + | chr5.4:17305451-17305470 | MS.gene83462:intron | 35.0% | |
| GTATGAATGGTTGTTGTAGT+GGG | + | chr5.4:17305510-17305529 | MS.gene83462:intron | 35.0% | |
| GTGATAACTAACGAGTGAAT+AGG | + | chr5.4:17306252-17306271 | MS.gene83462:intron | 35.0% | |
| GTTAACAGAAAAATTGACGG+AGG | + | chr5.4:17307459-17307478 | MS.gene83462:intron | 35.0% | |
| GTTAACAGAAAAATTGACGG+AGG | - | chr5.4:17307478-17307459 | None:intergenic | 35.0% | |
| TAAAGAGATACAGAGATTGG+GGG | - | chr5.4:17308549-17308568 | None:intergenic | 35.0% | |
| TAACAGAAAAATTGACGGAG+GGG | + | chr5.4:17307461-17307480 | MS.gene83462:intron | 35.0% | |
| TAACAGAAAAATTGACGGAG+GGG | - | chr5.4:17307480-17307461 | None:intergenic | 35.0% | |
| TAACGTTATGCAATTTCAGG+GGG | + | chr5.4:17307494-17307513 | MS.gene83462:intron | 35.0% | |
| TAACGTTATGCAATTTCAGG+GGG | - | chr5.4:17307513-17307494 | None:intergenic | 35.0% | |
| TATAGGGTAAAGGAAAAGGA+AGG | - | chr5.4:17305282-17305301 | None:intergenic | 35.0% | |
| TATGAATGGTTGTTGTAGTG+GGG | + | chr5.4:17305511-17305530 | MS.gene83462:intron | 35.0% | |
| TATTCATCGTTCTCCTTCTT+TGG | + | chr5.4:17310510-17310529 | MS.gene83462:CDS | 35.0% | |
| TCAGTCATTGTGACTGTTAT+CGG | + | chr5.4:17308227-17308246 | MS.gene83462:intron | 35.0% | |
| TCTGATTCATTAGTGTGCAT+GGG | + | chr5.4:17311012-17311031 | MS.gene83462:CDS | 35.0% | |
| TGATGAAGCTTACAATTTCG+GGG | - | chr5.4:17306286-17306305 | None:intergenic | 35.0% | |
| TGATGTTTCGTTAACTACAG+GGG | + | chr5.4:17307522-17307541 | MS.gene83462:intron | 35.0% | |
| TGATGTTTCGTTAACTACAG+GGG | - | chr5.4:17307541-17307522 | None:intergenic | 35.0% | |
| TTAAAAGAACCACACCCTTT+CGG | - | chr5.4:17308065-17308084 | None:intergenic | 35.0% | |
| TTTCTGGACATTTGTATGGT+GGG | + | chr5.4:17311047-17311066 | MS.gene83462:CDS | 35.0% | |
| ! | AGATAGAGTTGATCTGATGA+AGG | - | chr5.4:17309817-17309836 | None:intergenic | 35.0% |
| ! | ATTATTTAGGGTAGGGCTAA+CGG | + | chr5.4:17308466-17308485 | MS.gene83462:intron | 35.0% |
| ! | ATTTCTGGACATTTGTATGG+TGG | + | chr5.4:17311046-17311065 | MS.gene83462:CDS | 35.0% |
| ! | CATAGATGTCTGAGTTTTCA+AGG | + | chr5.4:17309220-17309239 | MS.gene83462:intron | 35.0% |
| ! | CATCTTGATGGAAAGCTTTT+AGG | - | chr5.4:17307610-17307629 | None:intergenic | 35.0% |
| ! | CATGTTTATTGCTGCTTCAA+TGG | + | chr5.4:17305188-17305207 | MS.gene83462:CDS | 35.0% |
| ! | GATAGAGTTGATCTGATGAA+GGG | - | chr5.4:17309816-17309835 | None:intergenic | 35.0% |
| ! | TGTTTCAGATCTGAGACTTT+GGG | + | chr5.4:17308001-17308020 | MS.gene83462:intron | 35.0% |
| !! | AAGGAAGGTACCAGAAAATA+AGG | - | chr5.4:17305267-17305286 | None:intergenic | 35.0% |
| !! | AAGTTGATGAGGCAAAGATA+AGG | - | chr5.4:17310002-17310021 | None:intergenic | 35.0% |
| !! | GCTATTTCTGGACATTTGTA+TGG | + | chr5.4:17311043-17311062 | MS.gene83462:CDS | 35.0% |
| !! | TAGATGTCTGAGTTTTCAAG+GGG | + | chr5.4:17309222-17309241 | MS.gene83462:intron | 35.0% |
| !! | TATAATGGGTGTTAGATGTG+TGG | + | chr5.4:17306064-17306083 | MS.gene83462:intron | 35.0% |
| !! | TGAGTTCTAGAATCAGCATT+TGG | - | chr5.4:17308715-17308734 | None:intergenic | 35.0% |
| !! | TTGACTTCTCTGTTTCTGTT+TGG | + | chr5.4:17307898-17307917 | MS.gene83462:intron | 35.0% |
| !!! | AAGGACGTGTGAGATTTTTT+AGG | - | chr5.4:17308632-17308651 | None:intergenic | 35.0% |
| !!! | CATCACTTTGCCTTATTTTC+TGG | + | chr5.4:17305254-17305273 | MS.gene83462:CDS | 35.0% |
| !!! | GTGAATTGTGGCAAGTTTTT+TGG | + | chr5.4:17310300-17310319 | MS.gene83462:CDS | 35.0% |
| !!! | TTTTTTCTGTGTCTGTTGAG+TGG | + | chr5.4:17309646-17309665 | MS.gene83462:CDS | 35.0% |
| AAAGAGATACAGAGATTGGG+GGG | - | chr5.4:17308548-17308567 | None:intergenic | 40.0% | |
| AACAGAAAAATTGACGGAGG+GGG | + | chr5.4:17307462-17307481 | MS.gene83462:intron | 40.0% | |
| AACAGAAAAATTGACGGAGG+GGG | - | chr5.4:17307481-17307462 | None:intergenic | 40.0% | |
| AACAGTCACAATGACTGAGA+TGG | - | chr5.4:17308225-17308244 | None:intergenic | 40.0% | |
| AACATCAGAGAATCAAGGAC+AGG | - | chr5.4:17308134-17308153 | None:intergenic | 40.0% | |
| AACGCTAAGGATCTGTTAAC+TGG | - | chr5.4:17309727-17309746 | None:intergenic | 40.0% | |
| AACGTTATGCAATTTCAGGG+GGG | + | chr5.4:17307495-17307514 | MS.gene83462:intron | 40.0% | |
| AACGTTATGCAATTTCAGGG+GGG | - | chr5.4:17307514-17307495 | None:intergenic | 40.0% | |
| AAGATGAATGCAATTGGGGT+TGG | - | chr5.4:17310745-17310764 | None:intergenic | 40.0% | |
| AAGTTCTACTTTGCAAGGAC+AGG | + | chr5.4:17310697-17310716 | MS.gene83462:CDS | 40.0% | |
| ACATCAAGGCTTTACTTTGG+TGG | + | chr5.4:17310033-17310052 | MS.gene83462:CDS | 40.0% | |
| ACATCAGAGAATCAAGGACA+GGG | - | chr5.4:17308133-17308152 | None:intergenic | 40.0% | |
| ACGCTAAGGATCTGTTAACT+GGG | - | chr5.4:17309726-17309745 | None:intergenic | 40.0% | |
| AGCCATGAAACCATAGAGAA+GGG | - | chr5.4:17310935-17310954 | None:intergenic | 40.0% | |
| AGTGCTATGGCACTTAATGT+AGG | + | chr5.4:17310781-17310800 | MS.gene83462:CDS | 40.0% | |
| AGTTAACAGATCCTTAGCGT+TGG | + | chr5.4:17309726-17309745 | MS.gene83462:CDS | 40.0% | |
| AGTTCTACTTTGCAAGGACA+GGG | + | chr5.4:17310698-17310717 | MS.gene83462:CDS | 40.0% | |
| ATAATAGGTTAGAACCGGAG+AGG | - | chr5.4:17308202-17308221 | None:intergenic | 40.0% | |
| ATCCCTTCTCTATGGTTTCA+TGG | + | chr5.4:17310930-17310949 | MS.gene83462:CDS | 40.0% | |
| ATCTTGCCGTTATGTATTCC+TGG | + | chr5.4:17310072-17310091 | MS.gene83462:CDS | 40.0% | |
| ATGAAGCTTACAATTTCGGG+GGG | - | chr5.4:17306284-17306303 | None:intergenic | 40.0% | |
| ATGTAGATACTGTGTATGGG+TGG | + | chr5.4:17307627-17307646 | MS.gene83462:intron | 40.0% | |
| ATTCATTAGTGTGCATGGGA+CGG | + | chr5.4:17311016-17311035 | MS.gene83462:CDS | 40.0% | |
| CAACACCAAGTGATCAGAAA+AGG | - | chr5.4:17307683-17307702 | None:intergenic | 40.0% | |
| CAGCAAGATGAATGCAATTG+GGG | - | chr5.4:17310749-17310768 | None:intergenic | 40.0% | |
| CAGGATCAATTGGAAATGCT+GGG | + | chr5.4:17310324-17310343 | MS.gene83462:CDS | 40.0% | |
| CAGTTGTTCTCTTGACTGAT+GGG | + | chr5.4:17305478-17305497 | MS.gene83462:intron | 40.0% | |
| CCAGCAAGATGAATGCAATT+GGG | - | chr5.4:17310750-17310769 | None:intergenic | 40.0% | |
| CTATTTGAAAGGACTCTAGG+TGG | + | chr5.4:17309358-17309377 | MS.gene83462:intron | 40.0% | |
| CTTCTGATGAAGCAACATCA+AGG | + | chr5.4:17310019-17310038 | MS.gene83462:CDS | 40.0% | |
| GAAGACCGATCCATGAAAAA+CGG | - | chr5.4:17307777-17307796 | None:intergenic | 40.0% | |
| GAATGAGTGTCTGATAAAGG+CGG | - | chr5.4:17309904-17309923 | None:intergenic | 40.0% | |
| GATGAAGCTTACAATTTCGG+GGG | - | chr5.4:17306285-17306304 | None:intergenic | 40.0% | |
| GATGTTTCGTTAACTACAGG+GGG | + | chr5.4:17307523-17307542 | MS.gene83462:intron | 40.0% | |
| GATGTTTCGTTAACTACAGG+GGG | - | chr5.4:17307542-17307523 | None:intergenic | 40.0% | |
| GCAACATCAAGGCTTTACTT+TGG | + | chr5.4:17310030-17310049 | MS.gene83462:CDS | 40.0% | |
| GCAAGACAAAAAAACACTGC+CGG | - | chr5.4:17307821-17307840 | None:intergenic | 40.0% | |
| GGACAGATAGCTCAATCTTT+AGG | + | chr5.4:17310453-17310472 | MS.gene83462:CDS | 40.0% | |
| GGAGAATGAGTGTCTGATAA+AGG | - | chr5.4:17309907-17309926 | None:intergenic | 40.0% | |
| GGTATGAATGGTTGTTGTAG+TGG | + | chr5.4:17305509-17305528 | MS.gene83462:intron | 40.0% | |
| GTCTGATTCATTAGTGTGCA+TGG | + | chr5.4:17311011-17311030 | MS.gene83462:CDS | 40.0% | |
| GTGATTGACACTCAAACTGT+CGG | - | chr5.4:17310881-17310900 | None:intergenic | 40.0% | |
| GTGATTTCGTAAACCCGAAA+GGG | + | chr5.4:17308048-17308067 | MS.gene83462:intron | 40.0% | |
| GTTTACGAAATCACCGCAAA+AGG | - | chr5.4:17308042-17308061 | None:intergenic | 40.0% | |
| TAAAAGAACCACACCCTTTC+GGG | - | chr5.4:17308064-17308083 | None:intergenic | 40.0% | |
| TAAACTCGATATCCGATCCA+AGG | - | chr5.4:17309266-17309285 | None:intergenic | 40.0% | |
| TACTACGAAGTAGGTTCAAG+AGG | + | chr5.4:17309384-17309403 | MS.gene83462:intron | 40.0% | |
| TATATTGCATACTTCTGCGG+AGG | + | chr5.4:17310399-17310418 | MS.gene83462:CDS | 40.0% | |
| TCAGTTGTTCTCTTGACTGA+TGG | + | chr5.4:17305477-17305496 | MS.gene83462:intron | 40.0% | |
| TCCAAAGAGCTCAGATGTAA+CGG | - | chr5.4:17310857-17310876 | None:intergenic | 40.0% | |
| TCTCTAGCATATATAACGCC+AGG | - | chr5.4:17310093-17310112 | None:intergenic | 40.0% | |
| TGATTGACACTCAAACTGTC+GGG | - | chr5.4:17310880-17310899 | None:intergenic | 40.0% | |
| TGGGGATGTATATCTGTCAT+AGG | + | chr5.4:17311066-17311085 | MS.gene83462:CDS | 40.0% | |
| TTCTGGACATTTGTATGGTG+GGG | + | chr5.4:17311048-17311067 | MS.gene83462:CDS | 40.0% | |
| TTTAACCCGAAAGGGTTGTT+CGG | + | chr5.4:17308080-17308099 | MS.gene83462:intron | 40.0% | |
| TTTCATATTTGCAGCTGCAG+TGG | + | chr5.4:17310831-17310850 | MS.gene83462:CDS | 40.0% | |
| ! | CTTGATGGAAAGCTTTTAGG+AGG | - | chr5.4:17307607-17307626 | None:intergenic | 40.0% |
| ! | GTGGTTCTTTTAACCCGAAA+GGG | + | chr5.4:17308072-17308091 | MS.gene83462:intron | 40.0% |
| ! | GTGTTTCAGATCTGAGACTT+TGG | + | chr5.4:17308000-17308019 | MS.gene83462:intron | 40.0% |
| ! | TGATTGGATCTGTTTGCTGA+TGG | + | chr5.4:17307846-17307865 | MS.gene83462:intron | 40.0% |
| ! | TGTGGTTCTTTTAACCCGAA+AGG | + | chr5.4:17308071-17308090 | MS.gene83462:intron | 40.0% |
| ! | TTATTTAGGGTAGGGCTAAC+GGG | + | chr5.4:17308467-17308486 | MS.gene83462:intron | 40.0% |
| ! | TTGTTCGGGTTCTTTGCAAT+CGG | + | chr5.4:17308095-17308114 | MS.gene83462:intron | 40.0% |
| ! | TTTTGTCTTGCACCAGTGAT+TGG | + | chr5.4:17307830-17307849 | MS.gene83462:intron | 40.0% |
| !! | AAAGTGTTTGGTTGGTCTTC+TGG | + | chr5.4:17305132-17305151 | MS.gene83462:CDS | 40.0% |
| !! | AGATGTCTGAGTTTTCAAGG+GGG | + | chr5.4:17309223-17309242 | MS.gene83462:intron | 40.0% |
| !! | GTTAAGTTGGTTGAGTTCTG+TGG | - | chr5.4:17308838-17308857 | None:intergenic | 40.0% |
| !! | TCAATGGGTCTTGTTGGTTA+TGG | + | chr5.4:17305204-17305223 | MS.gene83462:CDS | 40.0% |
| !! | TGAGGAGTGCTCTTTCTATT+AGG | + | chr5.4:17308443-17308462 | MS.gene83462:intron | 40.0% |
| !! | TGCTTCATCAGAAGTTGATG+AGG | - | chr5.4:17310013-17310032 | None:intergenic | 40.0% |
| !!! | GACGTGTGAGATTTTTTAGG+AGG | - | chr5.4:17308629-17308648 | None:intergenic | 40.0% |
| !!! | GTTTTTTGGGCAGGATCAAT+TGG | + | chr5.4:17310314-17310333 | MS.gene83462:CDS | 40.0% |
| AAGAACCCGAACAACCCTTT+CGG | - | chr5.4:17308089-17308108 | None:intergenic | 45.0% | |
| AAGAGATACAGAGATTGGGG+GGG | - | chr5.4:17308547-17308566 | None:intergenic | 45.0% | |
| ACCAAGTGATCAGAAAAGGG+TGG | - | chr5.4:17307679-17307698 | None:intergenic | 45.0% | |
| AGGTGGAGATACTACGAAGT+AGG | + | chr5.4:17309375-17309394 | MS.gene83462:intron | 45.0% | |
| AGGTGGTACTCCTTTCAGAT+CGG | + | chr5.4:17307748-17307767 | MS.gene83462:intron | 45.0% | |
| ATCGTTGCACAGCAAATAGC+TGG | - | chr5.4:17306093-17306112 | None:intergenic | 45.0% | |
| CAGCAAACAGATCCAATCAC+TGG | - | chr5.4:17307845-17307864 | None:intergenic | 45.0% | |
| CAGCCATGAAACCATAGAGA+AGG | - | chr5.4:17310936-17310955 | None:intergenic | 45.0% | |
| CCAATTGGATCCCTTCTCTA+TGG | + | chr5.4:17310922-17310941 | MS.gene83462:CDS | 45.0% | |
| CCATAGAGAAGGGATCCAAT+TGG | - | chr5.4:17310925-17310944 | None:intergenic | 45.0% | |
| CCCAATTGCATTCATCTTGC+TGG | + | chr5.4:17310747-17310766 | MS.gene83462:CDS | 45.0% | |
| CCTGGAACATCAGAGAATCA+AGG | - | chr5.4:17308139-17308158 | None:intergenic | 45.0% | |
| CCTTGATTCTCTGATGTTCC+AGG | + | chr5.4:17308136-17308155 | MS.gene83462:intron | 45.0% | |
| GAGTCGACGTTCTATAACTG+TGG | - | chr5.4:17310479-17310498 | None:intergenic | 45.0% | |
| GCACTCACTGTGAGTTTCAA+TGG | + | chr5.4:17309748-17309767 | MS.gene83462:CDS | 45.0% | |
| GCAGGAAGTTCTACTTTGCA+AGG | + | chr5.4:17310692-17310711 | MS.gene83462:intron | 45.0% | |
| GCAGGATCAATTGGAAATGC+TGG | + | chr5.4:17310323-17310342 | MS.gene83462:CDS | 45.0% | |
| GCCAGCAAGATGAATGCAAT+TGG | - | chr5.4:17310751-17310770 | None:intergenic | 45.0% | |
| GGATCTTGATACCGTGTTGA+CGG | + | chr5.4:17308310-17308329 | MS.gene83462:intron | 45.0% | |
| GGTGATTTCGTAAACCCGAA+AGG | + | chr5.4:17308047-17308066 | MS.gene83462:intron | 45.0% | |
| TGAGTGGTTGCAGTATCTGT+TGG | + | chr5.4:17309662-17309681 | MS.gene83462:CDS | 45.0% | |
| TTAACCCGAAAGGGTTGTTC+GGG | + | chr5.4:17308081-17308100 | MS.gene83462:intron | 45.0% | |
| TTGTTCTCTTGACTGATGGG+TGG | + | chr5.4:17305481-17305500 | MS.gene83462:intron | 45.0% | |
| ! | ACCACCCTTTTCTGATCACT+TGG | + | chr5.4:17307675-17307694 | MS.gene83462:intron | 45.0% |
| ! | AGAATCAGCATTTGGAGCCT+GGG | - | chr5.4:17308707-17308726 | None:intergenic | 45.0% |
| ! | ATTTGGAGCCTGGGAGTTAT+TGG | - | chr5.4:17308698-17308717 | None:intergenic | 45.0% |
| ! | CAACCTTTTCACAAGAACCG+CGG | - | chr5.4:17310364-17310383 | None:intergenic | 45.0% |
| ! | CAAGGTCTGCTTGGTGAAAA+CGG | + | chr5.4:17310246-17310265 | MS.gene83462:CDS | 45.0% |
| ! | CTCTTACGGTTCCTTTTGAG+CGG | + | chr5.4:17307710-17307729 | MS.gene83462:intron | 45.0% |
| ! | CTGCTTGGTGAAAACGGATA+TGG | + | chr5.4:17310252-17310271 | MS.gene83462:CDS | 45.0% |
| ! | GGTGTTGCAACAGACTCTTA+CGG | + | chr5.4:17307696-17307715 | MS.gene83462:intron | 45.0% |
| ! | TACTTCTGCGGAGGTACAAT+TGG | + | chr5.4:17310408-17310427 | MS.gene83462:CDS | 45.0% |
| ! | TAGAATCAGCATTTGGAGCC+TGG | - | chr5.4:17308708-17308727 | None:intergenic | 45.0% |
| ! | TATAACCGAGTTCTGACGAG+CGG | - | chr5.4:17309935-17309954 | None:intergenic | 45.0% |
| ! | TGTTCTCTTGACTGATGGGT+GGG | + | chr5.4:17305482-17305501 | MS.gene83462:intron | 45.0% |
| ! | TTCAGATCTGAGACTTTGGG+TGG | + | chr5.4:17308004-17308023 | MS.gene83462:intron | 45.0% |
| ! | TTTGGAGCCTGGGAGTTATT+GGG | - | chr5.4:17308697-17308716 | None:intergenic | 45.0% |
| !! | ACTTTGGGTGGTGGTAGTTT+TGG | + | chr5.4:17308016-17308035 | MS.gene83462:intron | 45.0% |
| !! | AGCTAGAGTTTTCGACTCGA+AGG | - | chr5.4:17310143-17310162 | None:intergenic | 45.0% |
| !! | ATACCTGCTGCTTTGTTCAG+GGG | + | chr5.4:17308274-17308293 | MS.gene83462:intron | 45.0% |
| !! | CTTCTCTGTTTCTGTTTGGC+TGG | + | chr5.4:17307902-17307921 | MS.gene83462:intron | 45.0% |
| !! | GATACCTGCTGCTTTGTTCA+GGG | + | chr5.4:17308273-17308292 | MS.gene83462:intron | 45.0% |
| !! | GGATTAGTCAGTCCTTGGAT+CGG | + | chr5.4:17309251-17309270 | MS.gene83462:intron | 45.0% |
| !! | GGCTTCATCTGAAAGTGCTA+TGG | + | chr5.4:17310768-17310787 | MS.gene83462:CDS | 45.0% |
| !! | TGATACCTGCTGCTTTGTTC+AGG | + | chr5.4:17308272-17308291 | MS.gene83462:intron | 45.0% |
| !! | TGGGGTTGGTAAAAGTGCAA+TGG | - | chr5.4:17310731-17310750 | None:intergenic | 45.0% |
| !!! | ATTCCCTTTTGGGTTGTACC+TGG | + | chr5.4:17308508-17308527 | MS.gene83462:intron | 45.0% |
| !!! | GTGGTAGTTTTGGCCTTTTG+CGG | + | chr5.4:17308026-17308045 | MS.gene83462:intron | 45.0% |
| !!! | TTCCCTTTTGGGTTGTACCT+GGG | + | chr5.4:17308509-17308528 | MS.gene83462:intron | 45.0% |
| !!! | TTGTGGCAAGTTTTTTGGGC+AGG | + | chr5.4:17310305-17310324 | MS.gene83462:CDS | 45.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | - | chr5.4:17307289-17307308 | None:intergenic | 5.0% |
| !! | ATAATAATAATAATAATATG+TGG | - | chr5.4:17308745-17308764 | None:intergenic | 5.0% |
| !! | ATTAATAAAAATGAAAAAAA+AGG | - | chr5.4:17306589-17306570 | None:intergenic | 5.0% |
| !! | TAAAAAAAATTAAAAAATTC+TGG | + | chr5.4:17306494-17306513 | MS.gene83462:intron | 5.0% |
| !! | TCTTTATTAATTAATTAATA+TGG | + | chr5.4:17305350-17305369 | MS.gene83462:intron | 5.0% |
| !! | TGAAAAATTAAAAAAAATTA+TGG | + | chr5.4:17306463-17306482 | MS.gene83462:intron | 5.0% |
| !! | TTAATAAAAATGAAAAAAAA+GGG | - | chr5.4:17307254-17307273 | None:intergenic | 5.0% |
| !!! | TTTCATTATTTTATTTTTAT+AGG | - | chr5.4:17308891-17308910 | None:intergenic | 5.0% |
| AAAACGGACGCCGATCTGAA+AGG | - | chr5.4:17307761-17307780 | None:intergenic | 50.0% | |
| AAAGGCGGTTGGCGAAGAAT+CGG | - | chr5.4:17309889-17309908 | None:intergenic | 50.0% | |
| AACAAACGCAGCCGCTCAAA+AGG | - | chr5.4:17307724-17307743 | None:intergenic | 50.0% | |
| AGAACCCGAACAACCCTTTC+GGG | - | chr5.4:17308088-17308107 | None:intergenic | 50.0% | |
| AGTCAGGCATAGCTGAAAGC+AGG | - | chr5.4:17310539-17310558 | None:intergenic | 50.0% | |
| CAGTCGGTTGCGCTGAAATA+CGG | - | chr5.4:17311155-17311174 | None:intergenic | 50.0% | |
| CATGGATCGGTCTTCCCTAT+CGG | + | chr5.4:17307782-17307801 | MS.gene83462:intron | 50.0% | |
| CCTGGGAGTTATTGGGAGTT+GGG | - | chr5.4:17308690-17308709 | None:intergenic | 50.0% | |
| CGAAGTGAGAAGAGGGACAA+GGG | - | chr5.4:17309851-17309870 | None:intergenic | 50.0% | |
| CGCGGTTCTTGTGAAAAGGT+TGG | + | chr5.4:17310362-17310381 | MS.gene83462:CDS | 50.0% | |
| CTGCAGGTCTCAAGTCTTCA+GGG | + | chr5.4:17308170-17308189 | MS.gene83462:intron | 50.0% | |
| GAACCACCATGAGACCGATA+GGG | - | chr5.4:17307799-17307818 | None:intergenic | 50.0% | |
| GAATGGATCGACCGTCAACA+CGG | - | chr5.4:17308324-17308343 | None:intergenic | 50.0% | |
| GACCCAGGTACAACCCAAAA+GGG | - | chr5.4:17308514-17308533 | None:intergenic | 50.0% | |
| GAGTGTCTGATAAAGGCGGT+TGG | - | chr5.4:17309900-17309919 | None:intergenic | 50.0% | |
| GCCGTTACATCTGAGCTCTT+TGG | + | chr5.4:17310853-17310872 | MS.gene83462:CDS | 50.0% | |
| GCTAATGCTATCTCAGCACC+TGG | + | chr5.4:17310970-17310989 | MS.gene83462:CDS | 50.0% | |
| GCTATCTCAGCACCTGGAAA+TGG | + | chr5.4:17310976-17310995 | MS.gene83462:CDS | 50.0% | |
| GTGATCAGAAAAGGGTGGTG+TGG | - | chr5.4:17307674-17307693 | None:intergenic | 50.0% | |
| GTTGCACAGCAAATAGCTGG+AGG | - | chr5.4:17306090-17306109 | None:intergenic | 50.0% | |
| TATCGGTCTCATGGTGGTTC+CGG | + | chr5.4:17307799-17307818 | MS.gene83462:intron | 50.0% | |
| TCTACTTTGCAAGGACAGGG+TGG | + | chr5.4:17310701-17310720 | MS.gene83462:CDS | 50.0% | |
| TCTGCAGGTCTCAAGTCTTC+AGG | + | chr5.4:17308169-17308188 | MS.gene83462:intron | 50.0% | |
| TGAAAGCAGGCGTCCAAAGA+AGG | - | chr5.4:17310526-17310545 | None:intergenic | 50.0% | |
| TGACCCAGGTACAACCCAAA+AGG | - | chr5.4:17308515-17308534 | None:intergenic | 50.0% | |
| TGGGTGGGAGATGGTATGAA+TGG | + | chr5.4:17305497-17305516 | MS.gene83462:intron | 50.0% | |
| TGGTTGAGTTCTGTGGACGT+CGG | - | chr5.4:17308831-17308850 | None:intergenic | 50.0% | |
| TTCGTAAACCCGAAAGGGTG+TGG | + | chr5.4:17308053-17308072 | MS.gene83462:intron | 50.0% | |
| TTTCTGTTTGGCTGGATCGC+AGG | + | chr5.4:17307910-17307929 | MS.gene83462:intron | 50.0% | |
| ! | AGATCTGAGACTTTGGGTGG+TGG | + | chr5.4:17308007-17308026 | MS.gene83462:intron | 50.0% |
| ! | GCTGCTTCAATGGGTCTTGT+TGG | + | chr5.4:17305198-17305217 | MS.gene83462:CDS | 50.0% |
| ! | TTGAGCGGCTGCGTTTGTTT+TGG | + | chr5.4:17307725-17307744 | MS.gene83462:intron | 50.0% |
| !! | AGATCGGCGTCCGTTTTTCA+TGG | + | chr5.4:17307764-17307783 | MS.gene83462:intron | 50.0% |
| !! | GAAGAGGGACAAGGGCATTT+AGG | - | chr5.4:17309843-17309862 | None:intergenic | 50.0% |
| !! | GAGTTTTCGACTCGAAGGCT+CGG | - | chr5.4:17310138-17310157 | None:intergenic | 50.0% |
| !! | GGCGTCCGTTTTTCATGGAT+CGG | + | chr5.4:17307769-17307788 | MS.gene83462:intron | 50.0% |
| !! | TACCTGCTGCTTTGTTCAGG+GGG | + | chr5.4:17308275-17308294 | MS.gene83462:intron | 50.0% |
| !! | TGGGACGGCAATGCTATTTC+TGG | + | chr5.4:17311031-17311050 | MS.gene83462:CDS | 50.0% |
| !! | TGTCTGAGTTTTCAAGGGGG+CGG | + | chr5.4:17309226-17309245 | MS.gene83462:intron | 50.0% |
| !!! | TTTTGGGTTGTACCTGGGTC+AGG | + | chr5.4:17308514-17308533 | MS.gene83462:intron | 50.0% |
| AACCCCCTGAACAAAGCAGC+AGG | - | chr5.4:17308280-17308299 | None:intergenic | 55.0% | |
| ACATGCCGCTCGTCAGAACT+CGG | + | chr5.4:17309927-17309946 | MS.gene83462:CDS | 55.0% | |
| AGGTGGTCGTACCGTTGATC+TGG | + | chr5.4:17307930-17307949 | MS.gene83462:intron | 55.0% | |
| CACAGTGAGTGCCAACGCTA+AGG | - | chr5.4:17309740-17309759 | None:intergenic | 55.0% | |
| CAGCCGCGGTTCTTGTGAAA+AGG | + | chr5.4:17310358-17310377 | MS.gene83462:CDS | 55.0% | |
| CCAGGTCTGTTGAGATCTGC+AGG | + | chr5.4:17308154-17308173 | MS.gene83462:intron | 55.0% | |
| CCCAACTCCCAATAACTCCC+AGG | + | chr5.4:17308687-17308706 | MS.gene83462:intron | 55.0% | |
| CCTGCAGATCTCAACAGACC+TGG | - | chr5.4:17308157-17308176 | None:intergenic | 55.0% | |
| CGGAGCAATGGAGATGCTCA+AGG | + | chr5.4:17310228-17310247 | MS.gene83462:CDS | 55.0% | |
| CTGCGAGCGAAGTGAGAAGA+GGG | - | chr5.4:17309858-17309877 | None:intergenic | 55.0% | |
| CTTCCCTATCGGTCTCATGG+TGG | + | chr5.4:17307793-17307812 | MS.gene83462:intron | 55.0% | |
| GCACTAATCGGTCTGAGCTC+AGG | + | chr5.4:17310808-17310827 | MS.gene83462:CDS | 55.0% | |
| GCCTGGGAGTTATTGGGAGT+TGG | - | chr5.4:17308691-17308710 | None:intergenic | 55.0% | |
| GCGAAGTGAGAAGAGGGACA+AGG | - | chr5.4:17309852-17309871 | None:intergenic | 55.0% | |
| GCGCAACCGACTGTGTCTTA+AGG | + | chr5.4:17311162-17311181 | MS.gene83462:CDS | 55.0% | |
| GGAACCACCATGAGACCGAT+AGG | - | chr5.4:17307800-17307819 | None:intergenic | 55.0% | |
| GGAGATGCTCAAGGTCTGCT+TGG | + | chr5.4:17310237-17310256 | MS.gene83462:CDS | 55.0% | |
| GGGAGAAGAACATTCAGCCG+CGG | + | chr5.4:17310344-17310363 | MS.gene83462:CDS | 55.0% | |
| GGTCTTCCCTATCGGTCTCA+TGG | + | chr5.4:17307790-17307809 | MS.gene83462:intron | 55.0% | |
| TTACGCGTCAAAGCAGCGCT+CGG | + | chr5.4:17310208-17310227 | MS.gene83462:CDS | 55.0% | |
| TTCAGGGGGTTGCTGGTACT+TGG | + | chr5.4:17308289-17308308 | MS.gene83462:intron | 55.0% | |
| ! | CTTGACTGATGGGTGGGAGA+TGG | + | chr5.4:17305488-17305507 | MS.gene83462:intron | 55.0% |
| ! | TCTGGTTTCGTGCTCGTACG+CGG | + | chr5.4:17308401-17308420 | MS.gene83462:intron | 55.0% |
| ! | TGCTTTGTTCAGGGGGTTGC+TGG | + | chr5.4:17308282-17308301 | MS.gene83462:intron | 55.0% |
| !! | CGGTGGGATTAGTCAGTCCT+TGG | + | chr5.4:17309246-17309265 | MS.gene83462:intron | 55.0% |
| !! | TGAGTTTTCAAGGGGGCGGT+GGG | + | chr5.4:17309230-17309249 | MS.gene83462:intron | 55.0% |
| !!! | AGCGGCTGCGTTTGTTTTGG+AGG | + | chr5.4:17307728-17307747 | MS.gene83462:intron | 55.0% |
| !!! | GGCTGCGTTTGTTTTGGAGG+TGG | + | chr5.4:17307731-17307750 | MS.gene83462:intron | 55.0% |
| CAAAGCAGCGCTCGGAGCAA+TGG | + | chr5.4:17310216-17310235 | MS.gene83462:CDS | 60.0% | |
| CATGCTGGGTTGCGTTCGTG+AGG | + | chr5.4:17308425-17308444 | MS.gene83462:intron | 60.0% | |
| CTGGTTTCGTGCTCGTACGC+GGG | + | chr5.4:17308402-17308421 | MS.gene83462:intron | 60.0% | |
| CTGTTTGGCTGGATCGCAGG+TGG | + | chr5.4:17307913-17307932 | MS.gene83462:intron | 60.0% | |
| CTTCAGGGCTACGTCCTCTC+CGG | + | chr5.4:17308185-17308204 | MS.gene83462:intron | 60.0% | |
| GAAGGCTCGGATGAACAGCG+CGG | - | chr5.4:17310125-17310144 | None:intergenic | 60.0% | |
| GCCACCAAAACACACCGCAG+CGG | - | chr5.4:17307874-17307893 | None:intergenic | 60.0% | |
| GCTGCGAGCGAAGTGAGAAG+AGG | - | chr5.4:17309859-17309878 | None:intergenic | 60.0% | |
| ! | GAGCGCTGCTTTGACGCGTA+AGG | - | chr5.4:17310209-17310228 | None:intergenic | 60.0% |
| ! | GAGTTCTGACGAGCGGCATG+TGG | - | chr5.4:17309928-17309947 | None:intergenic | 60.0% |
| !! | ACAGAGATTGGGGGGGCGTT+AGG | - | chr5.4:17308540-17308559 | None:intergenic | 60.0% |
| !! | CTGAGTTTTCAAGGGGGCGG+TGG | + | chr5.4:17309229-17309248 | MS.gene83462:intron | 60.0% |
| TGCTCGTACGCGGGCATGCT+GGG | + | chr5.4:17308411-17308430 | MS.gene83462:intron | 65.0% | |
| ! | GTTTGCTGATGGCGCCGCTG+CGG | + | chr5.4:17307857-17307876 | MS.gene83462:intron | 65.0% |
| !! | GCCGCTGCGGTGTGTTTTGG+TGG | + | chr5.4:17307870-17307889 | MS.gene83462:intron | 65.0% |
| GTGCTCGTACGCGGGCATGC+TGG | + | chr5.4:17308410-17308429 | MS.gene83462:intron | 70.0% | |
| ! | GGCGCCGCTGCGGTGTGTTT+TGG | + | chr5.4:17307867-17307886 | MS.gene83462:intron | 70.0% |
| !! | GGGGGCGTTAGGCCTGACCC+AGG | - | chr5.4:17308529-17308548 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 17305126 | 17311182 | 17305126 | ID=MS.gene83462 |
| chr5.4 | mRNA | 17305126 | 17311182 | 17305126 | ID=MS.gene83462.t1;Parent=MS.gene83462 |
| chr5.4 | exon | 17305126 | 17305275 | 17305126 | ID=MS.gene83462.t1.exon1;Parent=MS.gene83462.t1 |
| chr5.4 | CDS | 17305126 | 17305275 | 17305126 | ID=cds.MS.gene83462.t1;Parent=MS.gene83462.t1 |
| chr5.4 | exon | 17309643 | 17310568 | 17309643 | ID=MS.gene83462.t1.exon2;Parent=MS.gene83462.t1 |
| chr5.4 | CDS | 17309643 | 17310568 | 17309643 | ID=cds.MS.gene83462.t1;Parent=MS.gene83462.t1 |
| chr5.4 | exon | 17310696 | 17311182 | 17310696 | ID=MS.gene83462.t1.exon3;Parent=MS.gene83462.t1 |
| chr5.4 | CDS | 17310696 | 17311182 | 17310696 | ID=cds.MS.gene83462.t1;Parent=MS.gene83462.t1 |
| Gene Sequence |
| Protein sequence |
