Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87709.t1 | XP_003623622.1 | 95.3 | 233 | 11 | 0 | 1 | 233 | 1 | 233 | 4.40E-120 | 440.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87709.t1 | Q54760 | 60.9 | 184 | 71 | 1 | 49 | 232 | 2 | 184 | 7.2e-63 | 241.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87709.t1 | G7KY52 | 95.3 | 233 | 11 | 0 | 1 | 233 | 1 | 233 | 3.1e-120 | 440.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049173 | MS.gene87709 | 0.809532 | 1.81E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene87709 | 0.84499 | 5.37E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene87709 | 0.803826 | 2.90E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene87709 | 0.828537 | 8.51E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene87709 | 0.816815 | 4.55E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene87709 | 0.837383 | 5.37E-57 | -1.69E-46 |
| MS.gene049614 | MS.gene87709 | 0.842312 | 2.79E-58 | -1.69E-46 |
| MS.gene049627 | MS.gene87709 | 0.805763 | 1.14E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene87709 | 0.882286 | 1.18E-70 | -1.69E-46 |
| MS.gene050165 | MS.gene87709 | 0.879577 | 1.11E-69 | -1.69E-46 |
| MS.gene050333 | MS.gene87709 | 0.870382 | 1.52E-66 | -1.69E-46 |
| MS.gene050353 | MS.gene87709 | -0.803394 | 3.56E-49 | -1.69E-46 |
| MS.gene050518 | MS.gene87709 | 0.80294 | 4.42E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene87709 | 0.878815 | 2.07E-69 | -1.69E-46 |
| MS.gene050770 | MS.gene87709 | 0.88117 | 3.00E-70 | -1.69E-46 |
| MS.gene050772 | MS.gene87709 | 0.80168 | 8.03E-49 | -1.69E-46 |
| MS.gene05100 | MS.gene87709 | 0.876844 | 1.01E-68 | -1.69E-46 |
| MS.gene05101 | MS.gene87709 | 0.803653 | 3.15E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene87709 | 0.833043 | 6.69E-56 | -1.69E-46 |
| MS.gene051434 | MS.gene87709 | 0.82904 | 6.43E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene87709 | 0.808586 | 2.88E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene87709 | 0.811493 | 6.81E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene87709 | 0.832194 | 1.09E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene87709 | 0.827592 | 1.44E-54 | -1.69E-46 |
| MS.gene051949 | MS.gene87709 | 0.849257 | 3.63E-60 | -1.69E-46 |
| MS.gene052271 | MS.gene87709 | 0.859807 | 3.20E-63 | -1.69E-46 |
| MS.gene052290 | MS.gene87709 | 0.833042 | 6.69E-56 | -1.69E-46 |
| MS.gene052326 | MS.gene87709 | 0.815322 | 9.81E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene87709 | 0.866648 | 2.44E-65 | -1.69E-46 |
| MS.gene052916 | MS.gene87709 | 0.80883 | 2.55E-50 | -1.69E-46 |
| MS.gene053009 | MS.gene87709 | 0.809678 | 1.68E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene87709 | 0.8085 | 3.00E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene87709 | 0.814433 | 1.54E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene87709 | 0.803427 | 3.50E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene87709 | 0.872757 | 2.49E-67 | -1.69E-46 |
| MS.gene053384 | MS.gene87709 | 0.803584 | 3.25E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene87709 | 0.863705 | 2.06E-64 | -1.69E-46 |
| MS.gene054642 | MS.gene87709 | 0.842254 | 2.89E-58 | -1.69E-46 |
| MS.gene054802 | MS.gene87709 | 0.874736 | 5.35E-68 | -1.69E-46 |
| MS.gene054803 | MS.gene87709 | 0.874457 | 6.65E-68 | -1.69E-46 |
| MS.gene054804 | MS.gene87709 | 0.877826 | 4.60E-69 | -1.69E-46 |
| MS.gene055212 | MS.gene87709 | 0.807218 | 5.63E-50 | -1.69E-46 |
| MS.gene055254 | MS.gene87709 | 0.847366 | 1.21E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene87709 | 0.805128 | 1.55E-49 | -1.69E-46 |
| MS.gene055397 | MS.gene87709 | 0.892915 | 1.02E-74 | -1.69E-46 |
| MS.gene055499 | MS.gene87709 | 0.895023 | 1.42E-75 | -1.69E-46 |
| MS.gene055634 | MS.gene87709 | 0.809568 | 1.77E-50 | -1.69E-46 |
| MS.gene055636 | MS.gene87709 | 0.84766 | 1.00E-59 | -1.69E-46 |
| MS.gene055638 | MS.gene87709 | 0.861316 | 1.12E-63 | -1.69E-46 |
| MS.gene055647 | MS.gene87709 | 0.825839 | 3.77E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene87709 | 0.800929 | 1.14E-48 | -1.69E-46 |
| MS.gene055896 | MS.gene87709 | 0.82521 | 5.31E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene87709 | 0.811652 | 6.29E-51 | -1.69E-46 |
| MS.gene055956 | MS.gene87709 | -0.818133 | 2.30E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene87709 | 0.809382 | 1.94E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene87709 | 0.820669 | 6.07E-53 | -1.69E-46 |
| MS.gene056549 | MS.gene87709 | 0.852309 | 5.03E-61 | -1.69E-46 |
| MS.gene056657 | MS.gene87709 | 0.833705 | 4.57E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene87709 | 0.889843 | 1.68E-73 | -1.69E-46 |
| MS.gene057146 | MS.gene87709 | 0.816606 | 5.07E-52 | -1.69E-46 |
| MS.gene057246 | MS.gene87709 | 0.837655 | 4.57E-57 | -1.69E-46 |
| MS.gene057295 | MS.gene87709 | 0.811002 | 8.70E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene87709 | 0.8019 | 7.24E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene87709 | 0.800255 | 1.57E-48 | -1.69E-46 |
| MS.gene058019 | MS.gene87709 | 0.815403 | 9.41E-52 | -1.69E-46 |
| MS.gene058293 | MS.gene87709 | 0.801462 | 8.90E-49 | -1.69E-46 |
| MS.gene058323 | MS.gene87709 | 0.800491 | 1.41E-48 | -1.69E-46 |
| MS.gene058419 | MS.gene87709 | 0.826249 | 3.01E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene87709 | 0.828924 | 6.86E-55 | -1.69E-46 |
| MS.gene058723 | MS.gene87709 | 0.812988 | 3.21E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene87709 | 0.803311 | 3.70E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene87709 | 0.861045 | 1.35E-63 | -1.69E-46 |
| MS.gene059079 | MS.gene87709 | 0.808944 | 2.41E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene87709 | 0.816562 | 5.19E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene87709 | 0.856044 | 4.20E-62 | -1.69E-46 |
| MS.gene059539 | MS.gene87709 | 0.800484 | 1.41E-48 | -1.69E-46 |
| MS.gene059677 | MS.gene87709 | 0.833438 | 5.33E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene87709 | 0.805106 | 1.57E-49 | -1.69E-46 |
| MS.gene059858 | MS.gene87709 | 0.828809 | 7.31E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene87709 | 0.828036 | 1.12E-54 | -1.69E-46 |
| MS.gene059960 | MS.gene87709 | 0.905944 | 2.51E-80 | -1.69E-46 |
| MS.gene060193 | MS.gene87709 | 0.825168 | 5.43E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene87709 | 0.816348 | 5.79E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene87709 | 0.811749 | 5.99E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene87709 | 0.803364 | 3.61E-49 | -1.69E-46 |
| MS.gene061134 | MS.gene87709 | 0.80587 | 1.08E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene87709 | 0.826595 | 2.49E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene87709 | 0.906873 | 9.31E-81 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87709.t1 | MTR_7g073250 | 95.279 | 233 | 11 | 0 | 1 | 233 | 1 | 233 | 7.54e-141 | 394 |
| MS.gene87709.t1 | MTR_3g083530 | 26.984 | 189 | 124 | 4 | 49 | 233 | 62 | 240 | 9.85e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87709.t1 | AT3G08740 | 67.364 | 239 | 68 | 6 | 2 | 233 | 1 | 236 | 1.04e-111 | 320 |
| MS.gene87709.t1 | AT4G26310 | 28.497 | 193 | 130 | 4 | 42 | 232 | 69 | 255 | 1.33e-19 | 85.1 |
| MS.gene87709.t1 | AT4G26310 | 27.624 | 181 | 120 | 5 | 34 | 209 | 58 | 232 | 1.16e-13 | 68.9 |
Find 62 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTGTTCAATTTGTCTTCA+TGG | 0.273598 | 7.1:-29129050 | MS.gene87709:CDS |
| ACCTTAAGCTTGACTGTTAT+AGG | 0.325039 | 7.1:+29128004 | None:intergenic |
| CGATGTGGATCCGGGACTTA+AGG | 0.328589 | 7.1:-29127978 | MS.gene87709:CDS |
| AAGCTTAAGAATCATCTTAC+TGG | 0.330470 | 7.1:-29131646 | MS.gene87709:CDS |
| GGTTCACCTTGGCGTGTCTT+AGG | 0.336234 | 7.1:-29131809 | MS.gene87709:intron |
| TGGACTGCAATTTGCTGTTA+TGG | 0.343872 | 7.1:-29128739 | MS.gene87709:CDS |
| AGAAAGATGAAGAAGAGAAA+TGG | 0.346737 | 7.1:+29132040 | None:intergenic |
| CTGAGAAAACGGGGATTAGA+AGG | 0.346976 | 7.1:+29131967 | None:intergenic |
| GAAAGATGAAGAAGAGAAAT+GGG | 0.348618 | 7.1:+29132041 | None:intergenic |
| CCTTAAGCTTGACTGTTATA+GGG | 0.349152 | 7.1:+29128005 | None:intergenic |
| GCACCAGTGTCGAGAGTTGC+TGG | 0.378675 | 7.1:+29127419 | None:intergenic |
| TCAATTTGTCTTCATGGACT+TGG | 0.409456 | 7.1:-29129044 | MS.gene87709:intron |
| TAAGGTAGTCGATGTGGATC+CGG | 0.417488 | 7.1:-29127987 | MS.gene87709:CDS |
| AGGGGTGCGAATAGGAAAGT+TGG | 0.419595 | 7.1:+29131987 | None:intergenic |
| CCCTATAACAGTCAAGCTTA+AGG | 0.429085 | 7.1:-29128005 | MS.gene87709:CDS |
| AAATATAGGCGAGGAAATAC+TGG | 0.432665 | 7.1:-29127372 | MS.gene87709:CDS |
| GGTACTAATATCGAAGTTGA+TGG | 0.439639 | 7.1:-29131830 | MS.gene87709:CDS |
| ATACTGGTTGATACAAGATC+TGG | 0.444124 | 7.1:-29127356 | MS.gene87709:CDS |
| CGTCTGGATGAATCAGAAGT+TGG | 0.444955 | 7.1:-29128791 | MS.gene87709:CDS |
| GGATTAGAAGGGGTGCGAAT+AGG | 0.455811 | 7.1:+29131979 | None:intergenic |
| TCTAGTAATGACATTAAAGT+TGG | 0.456626 | 7.1:-29131851 | MS.gene87709:CDS |
| GATGTGGATCCGGGACTTAA+GGG | 0.461872 | 7.1:-29127977 | MS.gene87709:CDS |
| GACCTTCAGAGCTGGAAGTT+CGG | 0.469297 | 7.1:-29131608 | MS.gene87709:intron |
| GTGGGGCTTACTGAGAAAAC+GGG | 0.474683 | 7.1:+29131957 | None:intergenic |
| AGTGGGGCTTACTGAGAAAA+CGG | 0.475773 | 7.1:+29131956 | None:intergenic |
| GTCCCGCTCTTTGTAAATAT+AGG | 0.478856 | 7.1:-29127386 | MS.gene87709:CDS |
| AAGGTAGTCGATGTGGATCC+GGG | 0.490283 | 7.1:-29127986 | MS.gene87709:CDS |
| GTCTGGATGAATCAGAAGTT+GGG | 0.495506 | 7.1:-29128790 | MS.gene87709:CDS |
| CTTCATGTGAAACCTGGAAA+AGG | 0.505634 | 7.1:-29131688 | MS.gene87709:CDS |
| CGCCTATATTTACAAAGAGC+GGG | 0.509532 | 7.1:+29127384 | None:intergenic |
| ATGGGAGAGATTGAGCTTCA+AGG | 0.520678 | 7.1:+29132059 | None:intergenic |
| TGCAATTTGCTGTTATGGAA+TGG | 0.524366 | 7.1:-29128734 | MS.gene87709:CDS |
| TACATACGAGGAGACTCGTC+TGG | 0.525138 | 7.1:-29128807 | MS.gene87709:CDS |
| GGTATGAAGAAGAAGATTTG+CGG | 0.536049 | 7.1:+29132013 | None:intergenic |
| AAAACAAAGTGGCTGAAAGA+AGG | 0.539823 | 7.1:-29128764 | MS.gene87709:CDS |
| GAGTTTCTTCATGTGAAACC+TGG | 0.542138 | 7.1:-29131694 | MS.gene87709:CDS |
| AAACAGTTCACATATAAAGA+TGG | 0.561471 | 7.1:-29129070 | MS.gene87709:CDS |
| TACCGAACTTCCAGCTCTGA+AGG | 0.565488 | 7.1:+29131606 | None:intergenic |
| GTTGAAAAGACCTTCAGAGC+TGG | 0.566337 | 7.1:-29131616 | MS.gene87709:CDS |
| CGACAACACAACATGATAGC+GGG | 0.571198 | 7.1:-29132090 | None:intergenic |
| TGAGAAAACGGGGATTAGAA+GGG | 0.572553 | 7.1:+29131968 | None:intergenic |
| AAAGTGGCTGAAAGAAGGAA+TGG | 0.581341 | 7.1:-29128759 | MS.gene87709:CDS |
| TCGCCTATATTTACAAAGAG+CGG | 0.586804 | 7.1:+29127383 | None:intergenic |
| GCTGTGTCACCCTTAAGTCC+CGG | 0.588592 | 7.1:+29127968 | None:intergenic |
| TACTGGTTGATACAAGATCT+GGG | 0.592937 | 7.1:-29127355 | MS.gene87709:CDS |
| TTGATATGAAATCTTAAGCA+CGG | 0.595292 | 7.1:+29127321 | None:intergenic |
| GGTGCGAATAGGAAAGTTGG+AGG | 0.597541 | 7.1:+29131990 | None:intergenic |
| TGCGAATAGGAAAGTTGGAG+GGG | 0.600775 | 7.1:+29131992 | None:intergenic |
| AAGCCAGCAACTCTCGACAC+TGG | 0.613570 | 7.1:-29127422 | MS.gene87709:CDS |
| GTGCGAATAGGAAAGTTGGA+GGG | 0.615958 | 7.1:+29131991 | None:intergenic |
| TGATGAAGCTGATATAGTCA+AGG | 0.622649 | 7.1:-29129098 | MS.gene87709:CDS |
| CAAGCTTAAGGTAGTCGATG+TGG | 0.633779 | 7.1:-29127993 | MS.gene87709:CDS |
| GAGAAAACGGGGATTAGAAG+GGG | 0.646810 | 7.1:+29131969 | None:intergenic |
| GTATTACCTAAGACACGCCA+AGG | 0.651100 | 7.1:+29131803 | None:intergenic |
| TCGAAGTTGATGGTTCACCT+TGG | 0.655283 | 7.1:-29131820 | MS.gene87709:CDS |
| GAAAAGGTGCTGCATTTGTG+AGG | 0.657241 | 7.1:-29131672 | MS.gene87709:CDS |
| CTTAAGGGTGACACAGCCCA+AGG | 0.664333 | 7.1:-29127962 | MS.gene87709:intron |
| ACGACAACACAACATGATAG+CGG | 0.677593 | 7.1:-29132091 | None:intergenic |
| GCTCTTTGTAAATATAGGCG+AGG | 0.683752 | 7.1:-29127381 | MS.gene87709:CDS |
| AAGTTGGGAACAAAACAAAG+TGG | 0.698694 | 7.1:-29128775 | MS.gene87709:CDS |
| ATACTATCAGAGTACATACG+AGG | 0.738653 | 7.1:-29128819 | MS.gene87709:intron |
| TGGGGCTTACTGAGAAAACG+GGG | 0.761195 | 7.1:+29131958 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAGATTATGTATAATTA+AGG | + | chr7.1:29130414-29130433 | None:intergenic | 10.0% |
| !! | ATAAATATAAAAGCTAAAAA+AGG | - | chr7.1:29131688-29131707 | MS.gene87709:CDS | 10.0% |
| !! | ATTAGTAAAATAAAAAACTA+TGG | + | chr7.1:29130964-29130983 | None:intergenic | 10.0% |
| !! | TAACAAAGTAAAAAATTAAA+GGG | + | chr7.1:29130568-29130587 | None:intergenic | 10.0% |
| !! | TTAACAAAGTAAAAAATTAA+AGG | + | chr7.1:29130569-29130588 | None:intergenic | 10.0% |
| !! | TTAGTAAAATAAAAAACTAT+GGG | + | chr7.1:29130963-29130982 | None:intergenic | 10.0% |
| !!! | AATTTTTATTAGATTCTTTT+TGG | - | chr7.1:29128080-29128099 | MS.gene87709:intron | 10.0% |
| !!! | ATTTTGAATTAAATTGATTT+AGG | - | chr7.1:29128310-29128329 | MS.gene87709:intron | 10.0% |
| !!! | ATTTTTATTAGATTCTTTTT+GGG | - | chr7.1:29128081-29128100 | MS.gene87709:intron | 10.0% |
| !!! | TTTTGAATTAAATTGATTTA+GGG | - | chr7.1:29128311-29128330 | MS.gene87709:intron | 10.0% |
| !! | AAATAAAATTACAACAAGAA+CGG | + | chr7.1:29131266-29131285 | None:intergenic | 15.0% |
| !! | CTTAGTAGAAAAAAAAAAAA+GGG | + | chr7.1:29128156-29128175 | None:intergenic | 15.0% |
| !! | TAATAAATTATGAGATGAAA+AGG | + | chr7.1:29130712-29130731 | None:intergenic | 15.0% |
| !! | TCTTAGTAGAAAAAAAAAAA+AGG | + | chr7.1:29128157-29128176 | None:intergenic | 15.0% |
| !! | TTAAACATAAAATTTAAGGA+TGG | - | chr7.1:29131285-29131304 | MS.gene87709:intron | 15.0% |
| !!! | AATTTTATTTAAGCTTCAAT+AGG | + | chr7.1:29131340-29131359 | None:intergenic | 15.0% |
| !!! | TTACAAAACAGTAATTTTTT+AGG | + | chr7.1:29129988-29130007 | None:intergenic | 15.0% |
| !! | AAAAAGATTTCAGAAAAACT+AGG | + | chr7.1:29127838-29127857 | None:intergenic | 20.0% |
| !! | AAAAGATTTCAGAAAAACTA+GGG | + | chr7.1:29127837-29127856 | None:intergenic | 20.0% |
| !! | AAATTAGCAGTATAAGAAAA+TGG | + | chr7.1:29131481-29131500 | None:intergenic | 20.0% |
| !! | AAATTGTGAAATATGCATTT+AGG | + | chr7.1:29131604-29131623 | None:intergenic | 20.0% |
| !! | AAGTAAAAAATTAAAGGGTA+TGG | + | chr7.1:29130563-29130582 | None:intergenic | 20.0% |
| !! | AATTGTGAAATATGCATTTA+GGG | + | chr7.1:29131603-29131622 | None:intergenic | 20.0% |
| !! | AATTTGGCATTAAAAAAACA+AGG | - | chr7.1:29131619-29131638 | MS.gene87709:CDS | 20.0% |
| !! | ACTAAAATGATAAAGTTATC+TGG | - | chr7.1:29131566-29131585 | MS.gene87709:intron | 20.0% |
| !! | ATAATGAGTAGTGATTAAAA+TGG | - | chr7.1:29127670-29127689 | MS.gene87709:intron | 20.0% |
| !! | ATATAGGATACAATATGTTT+AGG | - | chr7.1:29129554-29129573 | MS.gene87709:intron | 20.0% |
| !! | ATATTCATTATCATCAATAC+TGG | + | chr7.1:29130770-29130789 | None:intergenic | 20.0% |
| !! | ATTTGGCATTAAAAAAACAA+GGG | - | chr7.1:29131620-29131639 | MS.gene87709:CDS | 20.0% |
| !! | CAATTAATAAGTAGGAATAA+GGG | - | chr7.1:29129667-29129686 | MS.gene87709:intron | 20.0% |
| !! | CATCATTTCTTGAAAAATAT+AGG | - | chr7.1:29129538-29129557 | MS.gene87709:intron | 20.0% |
| !! | TAAATGCATATTTCACAATT+TGG | - | chr7.1:29131603-29131622 | MS.gene87709:intron | 20.0% |
| !! | TGTATTCTTGTAATAGTTAA+TGG | - | chr7.1:29131139-29131158 | MS.gene87709:intron | 20.0% |
| !! | TTCAATGTAATTATATGTGT+CGG | - | chr7.1:29129410-29129429 | MS.gene87709:intron | 20.0% |
| !!! | AGATTTTATCAGCTAATAAT+TGG | - | chr7.1:29131661-29131680 | MS.gene87709:CDS | 20.0% |
| !!! | AGTATTGATGATAATGAATA+TGG | - | chr7.1:29130769-29130788 | MS.gene87709:intron | 20.0% |
| !!! | ATAGAAAATAATCTTTTTGC+TGG | - | chr7.1:29128490-29128509 | MS.gene87709:intron | 20.0% |
| !!! | GTATTGATGATAATGAATAT+GGG | - | chr7.1:29130770-29130789 | MS.gene87709:intron | 20.0% |
| ! | AAACAGTTCACATATAAAGA+TGG | - | chr7.1:29130342-29130361 | MS.gene87709:intron | 25.0% |
| ! | AAGTGATGAAAGTTTGAATA+TGG | - | chr7.1:29129605-29129624 | MS.gene87709:intron | 25.0% |
| ! | AATTGTTGGAATAGAGAATT+TGG | + | chr7.1:29130526-29130545 | None:intergenic | 25.0% |
| ! | AGTGATGAAAGTTTGAATAT+GGG | - | chr7.1:29129606-29129625 | MS.gene87709:intron | 25.0% |
| ! | ATATTCCTTCTTACAAATCA+TGG | + | chr7.1:29128003-29128022 | None:intergenic | 25.0% |
| ! | ATTGTTATACGAGTAAATCA+GGG | - | chr7.1:29130850-29130869 | MS.gene87709:intron | 25.0% |
| ! | ATTTGTCACAATTAATGAGT+GGG | - | chr7.1:29129729-29129748 | MS.gene87709:intron | 25.0% |
| ! | CATCATACTTGTATAACAAA+CGG | + | chr7.1:29129209-29129228 | None:intergenic | 25.0% |
| ! | CTCAAAAAGACAAATTCTTT+CGG | + | chr7.1:29130033-29130052 | None:intergenic | 25.0% |
| ! | CTGGTATTTATATAGCAAAA+AGG | + | chr7.1:29128407-29128426 | None:intergenic | 25.0% |
| ! | GAATTTACTATGAAATTGCT+TGG | - | chr7.1:29128023-29128042 | MS.gene87709:CDS | 25.0% |
| ! | GCAATTAATAAGTAGGAATA+AGG | - | chr7.1:29129666-29129685 | MS.gene87709:intron | 25.0% |
| ! | GTTGCTTCTAATTTCTTATT+GGG | - | chr7.1:29130241-29130260 | MS.gene87709:intron | 25.0% |
| ! | TCAAAAAGACAAATTCTTTC+GGG | + | chr7.1:29130032-29130051 | None:intergenic | 25.0% |
| ! | TCAACATAAATTATGTACCT+GGG | - | chr7.1:29129763-29129782 | MS.gene87709:intron | 25.0% |
| ! | TCTAAAAAATTTAGCTGTGT+CGG | + | chr7.1:29129379-29129398 | None:intergenic | 25.0% |
| ! | TCTAGTAATGACATTAAAGT+TGG | - | chr7.1:29127561-29127580 | MS.gene87709:intron | 25.0% |
| ! | TGACATTCAATATATCTAAG+AGG | + | chr7.1:29131827-29131846 | None:intergenic | 25.0% |
| ! | TTCAACATAAATTATGTACC+TGG | - | chr7.1:29129762-29129781 | MS.gene87709:intron | 25.0% |
| !! | AAAATAATCTTTTTGCTGGT+GGG | - | chr7.1:29128494-29128513 | MS.gene87709:intron | 25.0% |
| !! | AACTATGAATCAATGCTTTT+GGG | + | chr7.1:29130903-29130922 | None:intergenic | 25.0% |
| !! | AATTCTAATTTGTGAATGTG+TGG | + | chr7.1:29128997-29129016 | None:intergenic | 25.0% |
| !! | ACTTGTCTGTTTATATTTTC+AGG | - | chr7.1:29131368-29131387 | MS.gene87709:intron | 25.0% |
| !! | TACTAATCTGAAATGTTGAA+TGG | - | chr7.1:29130977-29130996 | MS.gene87709:intron | 25.0% |
| !! | TCATCTTTTAGTGAAAATAG+AGG | + | chr7.1:29128761-29128780 | None:intergenic | 25.0% |
| !! | TGAAGTCAATTTGATGATTA+AGG | - | chr7.1:29128056-29128075 | MS.gene87709:intron | 25.0% |
| !! | TGTTGCTTCTAATTTCTTAT+TGG | - | chr7.1:29130240-29130259 | MS.gene87709:intron | 25.0% |
| !! | TTAGCAAGCTTTAGTAATAT+AGG | - | chr7.1:29128957-29128976 | MS.gene87709:intron | 25.0% |
| !! | TTAGTGAAAATAGAGGTTTT+TGG | + | chr7.1:29128754-29128773 | None:intergenic | 25.0% |
| !!! | ACAGTTTTATATACATGCTT+TGG | - | chr7.1:29131001-29131020 | MS.gene87709:intron | 25.0% |
| !!! | AGTTTTATATACATGCTTTG+GGG | - | chr7.1:29131003-29131022 | MS.gene87709:intron | 25.0% |
| !!! | ATTAGATTCTTTTTGGGAAT+AGG | - | chr7.1:29128087-29128106 | MS.gene87709:intron | 25.0% |
| !!! | CAGTTTTATATACATGCTTT+GGG | - | chr7.1:29131002-29131021 | MS.gene87709:intron | 25.0% |
| !!! | TAGTTTTTTACAAAGCAAGA+GGG | + | chr7.1:29128470-29128489 | None:intergenic | 25.0% |
| !!! | TTAGATTCTTTTTGGGAATA+GGG | - | chr7.1:29128088-29128107 | MS.gene87709:intron | 25.0% |
| !!! | TTAGTTTTTTACAAAGCAAG+AGG | + | chr7.1:29128471-29128490 | None:intergenic | 25.0% |
| AAAAAGACAAATTCTTTCGG+GGG | + | chr7.1:29130030-29130049 | None:intergenic | 30.0% | |
| AAGAGTCTTTAGTGATGTTA+TGG | - | chr7.1:29130171-29130190 | MS.gene87709:intron | 30.0% | |
| AAGCTTAAGAATCATCTTAC+TGG | - | chr7.1:29127766-29127785 | MS.gene87709:intron | 30.0% | |
| AAGTATGATGCAACATAGTT+TGG | - | chr7.1:29129219-29129238 | MS.gene87709:intron | 30.0% | |
| ACACTATAGGATAGCAAAAT+TGG | + | chr7.1:29128244-29128263 | None:intergenic | 30.0% | |
| ACTGAAAGCAAAAGAATTGT+TGG | + | chr7.1:29130540-29130559 | None:intergenic | 30.0% | |
| AGAAAGATGAAGAAGAGAAA+TGG | + | chr7.1:29127375-29127394 | None:intergenic | 30.0% | |
| AGACAAGATAACAACAGAAA+AGG | + | chr7.1:29130272-29130291 | None:intergenic | 30.0% | |
| AGAGATTAGTGGAATTAAGA+AGG | + | chr7.1:29127514-29127533 | None:intergenic | 30.0% | |
| AGGTGAAATGGTTTATGTTT+GGG | - | chr7.1:29128579-29128598 | MS.gene87709:intron | 30.0% | |
| AGTCTGACAATGTTTATAAG+TGG | - | chr7.1:29127927-29127946 | MS.gene87709:intron | 30.0% | |
| ATATTGAATGTCAAGAGAGT+AGG | - | chr7.1:29131834-29131853 | MS.gene87709:CDS | 30.0% | |
| ATCTAACTCATTTATGTGAG+TGG | - | chr7.1:29130147-29130166 | MS.gene87709:intron | 30.0% | |
| ATCTGTGGCAATTAATAAGT+AGG | - | chr7.1:29129659-29129678 | MS.gene87709:intron | 30.0% | |
| CAAAAAGACAAATTCTTTCG+GGG | + | chr7.1:29130031-29130050 | None:intergenic | 30.0% | |
| CATTTGTCACAATTAATGAG+TGG | - | chr7.1:29129728-29129747 | MS.gene87709:intron | 30.0% | |
| CCTAGAAAATAAAGGTTTGA+GGG | + | chr7.1:29130747-29130766 | None:intergenic | 30.0% | |
| GAAAAAACATGATTGAGTGT+CGG | - | chr7.1:29128179-29128198 | MS.gene87709:intron | 30.0% | |
| GAAAACAACAAAGAGATTAG+TGG | + | chr7.1:29127525-29127544 | None:intergenic | 30.0% | |
| GAAAGATGAAGAAGAGAAAT+GGG | + | chr7.1:29127374-29127393 | None:intergenic | 30.0% | |
| GAATGTTAAGAATCTCACAT+CGG | - | chr7.1:29127895-29127914 | MS.gene87709:intron | 30.0% | |
| GACAAGGAAATCTAAATGTT+TGG | + | chr7.1:29128856-29128875 | None:intergenic | 30.0% | |
| GAGATTAGTGGAATTAAGAA+GGG | + | chr7.1:29127513-29127532 | None:intergenic | 30.0% | |
| GATACAGCATTAATCACTTA+AGG | + | chr7.1:29131244-29131263 | None:intergenic | 30.0% | |
| GATGATATAAATTGCATCTG+TGG | - | chr7.1:29129644-29129663 | MS.gene87709:intron | 30.0% | |
| GATTGTTATACGAGTAAATC+AGG | - | chr7.1:29130849-29130868 | MS.gene87709:intron | 30.0% | |
| GTAACTTCTCATTATGATCA+AGG | + | chr7.1:29130485-29130504 | None:intergenic | 30.0% | |
| GTCTGACAATGTTTATAAGT+GGG | - | chr7.1:29127928-29127947 | MS.gene87709:intron | 30.0% | |
| GTGTACTTGCATTATAGTTT+AGG | + | chr7.1:29129277-29129296 | None:intergenic | 30.0% | |
| GTTAGTGAAAAGATGAAAGT+GGG | + | chr7.1:29127476-29127495 | None:intergenic | 30.0% | |
| TAAAACACCATTTGGGAAAA+AGG | + | chr7.1:29131066-29131085 | None:intergenic | 30.0% | |
| TAGAATGGAAACAGATTGTT+GGG | - | chr7.1:29129148-29129167 | MS.gene87709:intron | 30.0% | |
| TAGAGAATTTGGACCTATTT+AGG | + | chr7.1:29130515-29130534 | None:intergenic | 30.0% | |
| TGAAAAACGAAGTATAACAC+AGG | + | chr7.1:29128893-29128912 | None:intergenic | 30.0% | |
| TGTAAATGGAATATGATTGC+AGG | - | chr7.1:29131957-29131976 | MS.gene87709:intron | 30.0% | |
| TTAGTGAAAAGATGAAAGTG+GGG | + | chr7.1:29127475-29127494 | None:intergenic | 30.0% | |
| TTGTTATACGAGTAAATCAG+GGG | - | chr7.1:29130851-29130870 | MS.gene87709:intron | 30.0% | |
| ! | AATAAAACTTTGAGAGAGGT+TGG | - | chr7.1:29128359-29128378 | MS.gene87709:intron | 30.0% |
| ! | AATACTGGCCTAGAAAATAA+AGG | + | chr7.1:29130755-29130774 | None:intergenic | 30.0% |
| ! | AGTTACTAGTTAGCCTAAAT+AGG | - | chr7.1:29130499-29130518 | MS.gene87709:intron | 30.0% |
| ! | CAACTATGAATCAATGCTTT+TGG | + | chr7.1:29130904-29130923 | None:intergenic | 30.0% |
| ! | CATTGGTTACTAATAGATGA+AGG | - | chr7.1:29127873-29127892 | MS.gene87709:intron | 30.0% |
| ! | CCTAAATAAAACTTTGAGAG+AGG | - | chr7.1:29128355-29128374 | MS.gene87709:intron | 30.0% |
| ! | CGAAAGAATTTGTCTTTTTG+AGG | - | chr7.1:29130031-29130050 | MS.gene87709:intron | 30.0% |
| ! | GAAAATAATCTTTTTGCTGG+TGG | - | chr7.1:29128493-29128512 | MS.gene87709:intron | 30.0% |
| ! | GAACTTTTGTGATTCTATAC+AGG | + | chr7.1:29131538-29131557 | None:intergenic | 30.0% |
| ! | GTTAATTTTCTGACTCAATG+TGG | - | chr7.1:29128640-29128659 | MS.gene87709:intron | 30.0% |
| ! | TATTATTCAATTGCGGATTG+TGG | - | chr7.1:29128202-29128221 | MS.gene87709:intron | 30.0% |
| ! | TTCTTTTTACTGTGTTGCAT+TGG | - | chr7.1:29127856-29127875 | MS.gene87709:intron | 30.0% |
| !! | TAGATTCTTTTTGGGAATAG+GGG | - | chr7.1:29128089-29128108 | MS.gene87709:intron | 30.0% |
| !!! | CATCTGACTCTTCTTTTTTA+TGG | + | chr7.1:29129803-29129822 | None:intergenic | 30.0% |
| !!! | CCTCTCTCAAAGTTTTATTT+AGG | + | chr7.1:29128358-29128377 | None:intergenic | 30.0% |
| AAAACAAAGTGGCTGAAAGA+AGG | - | chr7.1:29130648-29130667 | MS.gene87709:intron | 35.0% | |
| AAAAGACAAATTCTTTCGGG+GGG | + | chr7.1:29130029-29130048 | None:intergenic | 35.0% | |
| AAATACCAGTGTGTGCTTTA+AGG | - | chr7.1:29128418-29128437 | MS.gene87709:intron | 35.0% | |
| AAATATAGGCGAGGAAATAC+TGG | - | chr7.1:29132040-29132059 | MS.gene87709:CDS | 35.0% | |
| AAATGGAATATGATTGCAGG+TGG | - | chr7.1:29131960-29131979 | MS.gene87709:intron | 35.0% | |
| AAGCTAAAAAAGGACAACCT+AGG | - | chr7.1:29131698-29131717 | MS.gene87709:intron | 35.0% | |
| AAGTTGGGAACAAAACAAAG+TGG | - | chr7.1:29130637-29130656 | MS.gene87709:intron | 35.0% | |
| ACCTTAAGCTTGACTGTTAT+AGG | + | chr7.1:29131411-29131430 | None:intergenic | 35.0% | |
| AGCACTAGTAAAACACCATT+TGG | + | chr7.1:29131074-29131093 | None:intergenic | 35.0% | |
| AGCTAAAAAAGGACAACCTA+GGG | - | chr7.1:29131699-29131718 | MS.gene87709:intron | 35.0% | |
| AGCTTCATCAATCTGTCAAA+AGG | + | chr7.1:29130304-29130323 | None:intergenic | 35.0% | |
| AGGTTTCATTTCATGGTTGA+AGG | + | chr7.1:29128808-29128827 | None:intergenic | 35.0% | |
| AGTGCTACCACCATAAAAAA+AGG | + | chr7.1:29128934-29128953 | None:intergenic | 35.0% | |
| ATAAGAAAATGGCATCACCT+TGG | + | chr7.1:29131470-29131489 | None:intergenic | 35.0% | |
| ATACTATCAGAGTACATACG+AGG | - | chr7.1:29130593-29130612 | MS.gene87709:intron | 35.0% | |
| ATATGGGAGGATAAATGAAC+TGG | - | chr7.1:29129950-29129969 | MS.gene87709:intron | 35.0% | |
| ATTAGTGGAATTAAGAAGGG+TGG | + | chr7.1:29127510-29127529 | None:intergenic | 35.0% | |
| CAAGGTAAAGTTACCAACAA+CGG | + | chr7.1:29131780-29131799 | None:intergenic | 35.0% | |
| CAGATACTATCTATGAAGCA+CGG | - | chr7.1:29129308-29129327 | MS.gene87709:intron | 35.0% | |
| CATTATGATCAAGGACTGAT+AGG | + | chr7.1:29130476-29130495 | None:intergenic | 35.0% | |
| CATTCTACCTCCACAAATTA+GGG | + | chr7.1:29129135-29129154 | None:intergenic | 35.0% | |
| CCTTAAGCTTGACTGTTATA+GGG | + | chr7.1:29131410-29131429 | None:intergenic | 35.0% | |
| CCTTCTTACAAATCATGGTT+GGG | + | chr7.1:29127998-29128017 | None:intergenic | 35.0% | |
| CTTGCAGAACTAACTGTAAA+TGG | - | chr7.1:29131943-29131962 | MS.gene87709:intron | 35.0% | |
| GAGGTGAAATGGTTTATGTT+TGG | - | chr7.1:29128578-29128597 | MS.gene87709:intron | 35.0% | |
| GCACTAGTAAAACACCATTT+GGG | + | chr7.1:29131073-29131092 | None:intergenic | 35.0% | |
| GCCTAGAAAATAAAGGTTTG+AGG | + | chr7.1:29130748-29130767 | None:intergenic | 35.0% | |
| GGTACTAATATCGAAGTTGA+TGG | - | chr7.1:29127582-29127601 | MS.gene87709:intron | 35.0% | |
| GGTATGAAGAAGAAGATTTG+CGG | + | chr7.1:29127402-29127421 | None:intergenic | 35.0% | |
| GGTTAGTGAAAAGATGAAAG+TGG | + | chr7.1:29127477-29127496 | None:intergenic | 35.0% | |
| GTAGAATGGAAACAGATTGT+TGG | - | chr7.1:29129147-29129166 | MS.gene87709:intron | 35.0% | |
| GTATAGTATCCTATGAAGCA+CGG | + | chr7.1:29129500-29129519 | None:intergenic | 35.0% | |
| GTGCTACCACCATAAAAAAA+GGG | + | chr7.1:29128933-29128952 | None:intergenic | 35.0% | |
| TAAGAAAATGGCATCACCTT+GGG | + | chr7.1:29131469-29131488 | None:intergenic | 35.0% | |
| TAGCAATCCACAAGAAAACA+GGG | + | chr7.1:29130122-29130141 | None:intergenic | 35.0% | |
| TATGATGCAACATAGTTTGG+AGG | - | chr7.1:29129222-29129241 | MS.gene87709:intron | 35.0% | |
| TCAATTTGTCTTCATGGACT+TGG | - | chr7.1:29130368-29130387 | MS.gene87709:intron | 35.0% | |
| TCACCAATGTTGTCAAATAG+CGG | + | chr7.1:29128274-29128293 | None:intergenic | 35.0% | |
| TCCTTCTTACAAATCATGGT+TGG | + | chr7.1:29127999-29128018 | None:intergenic | 35.0% | |
| TCGCCTATATTTACAAAGAG+CGG | + | chr7.1:29132032-29132051 | None:intergenic | 35.0% | |
| TGATGAAGCTGATATAGTCA+AGG | - | chr7.1:29130314-29130333 | MS.gene87709:intron | 35.0% | |
| TGCTACCACCATAAAAAAAG+GGG | + | chr7.1:29128932-29128951 | None:intergenic | 35.0% | |
| TGGTGTTCAATTTGTCTTCA+TGG | - | chr7.1:29130362-29130381 | MS.gene87709:intron | 35.0% | |
| TTAAGAATCTCACATCGGAT+AGG | - | chr7.1:29127900-29127919 | MS.gene87709:intron | 35.0% | |
| TTACCTGTTCATATTCACTC+TGG | - | chr7.1:29129017-29129036 | MS.gene87709:intron | 35.0% | |
| TTAGCAATCCACAAGAAAAC+AGG | + | chr7.1:29130123-29130142 | None:intergenic | 35.0% | |
| TTTAGTTGCGATTGAGTTTG+AGG | - | chr7.1:29128559-29128578 | MS.gene87709:intron | 35.0% | |
| TTTGTGATTCTATACAGGAC+TGG | + | chr7.1:29131533-29131552 | None:intergenic | 35.0% | |
| ! | ATACTGGTTGATACAAGATC+TGG | - | chr7.1:29132056-29132075 | MS.gene87709:CDS | 35.0% |
| ! | GAAATGATGTGTCGTTGTAT+TGG | + | chr7.1:29129527-29129546 | None:intergenic | 35.0% |
| ! | GAGTATTCCTTTTTCCCAAA+TGG | - | chr7.1:29131056-29131075 | MS.gene87709:intron | 35.0% |
| ! | GGGCAATAAAAAAGCACAAT+AGG | + | chr7.1:29131908-29131927 | None:intergenic | 35.0% |
| ! | GTGTCGGTATTATTCAATTG+CGG | - | chr7.1:29128195-29128214 | MS.gene87709:intron | 35.0% |
| ! | TACTGGTTGATACAAGATCT+GGG | - | chr7.1:29132057-29132076 | MS.gene87709:CDS | 35.0% |
| ! | TTAGTAATATAGGTGTCGCA+TGG | - | chr7.1:29128967-29128986 | MS.gene87709:intron | 35.0% |
| !! | TAGAGGTTTTTGGATATCGT+CGG | + | chr7.1:29128744-29128763 | None:intergenic | 35.0% |
| !! | TCAAAGCATTGACAAGTACA+AGG | - | chr7.1:29131116-29131135 | MS.gene87709:intron | 35.0% |
| !! | TGCAATTTGCTGTTATGGAA+TGG | - | chr7.1:29130678-29130697 | MS.gene87709:intron | 35.0% |
| !!! | CCCTCAAACCTTTATTTTCT+AGG | - | chr7.1:29130744-29130763 | MS.gene87709:intron | 35.0% |
| AAAGTGGCTGAAAGAAGGAA+TGG | - | chr7.1:29130653-29130672 | MS.gene87709:intron | 40.0% | |
| AAGGGAATTATGAGCTGAGT+GGG | - | chr7.1:29129685-29129704 | MS.gene87709:intron | 40.0% | |
| ACTTGGTATCATCTGGAAAC+TGG | - | chr7.1:29130385-29130404 | MS.gene87709:intron | 40.0% | |
| AGAACACATCGAGTACGATA+TGG | - | chr7.1:29129933-29129952 | MS.gene87709:intron | 40.0% | |
| ATACAGCATCAACATGCCTT+TGG | + | chr7.1:29129839-29129858 | None:intergenic | 40.0% | |
| ATGAAACCTGACACACATTG+AGG | - | chr7.1:29128819-29128838 | MS.gene87709:intron | 40.0% | |
| ATTTAGCTGTGTCGGAGTAT+CGG | + | chr7.1:29129371-29129390 | None:intergenic | 40.0% | |
| CATTGGTGAGCGTTTGATAA+AGG | - | chr7.1:29128285-29128304 | MS.gene87709:intron | 40.0% | |
| CCATAAAAAAAGGGGGTTTC+CGG | + | chr7.1:29128924-29128943 | None:intergenic | 40.0% | |
| CCATTCTACCTCCACAAATT+AGG | + | chr7.1:29129136-29129155 | None:intergenic | 40.0% | |
| CCCTATAACAGTCAAGCTTA+AGG | - | chr7.1:29131407-29131426 | MS.gene87709:intron | 40.0% | |
| CGCCTATATTTACAAAGAGC+GGG | + | chr7.1:29132031-29132050 | None:intergenic | 40.0% | |
| CTAACACAACCCCAAAAAAC+CGG | + | chr7.1:29127974-29127993 | None:intergenic | 40.0% | |
| CTATCTATGAAGCACGGATA+CGG | - | chr7.1:29129314-29129333 | MS.gene87709:intron | 40.0% | |
| CTCACCAGCAAATCTCAATT+AGG | + | chr7.1:29129174-29129193 | None:intergenic | 40.0% | |
| CTTCATGTGAAACCTGGAAA+AGG | - | chr7.1:29127724-29127743 | MS.gene87709:intron | 40.0% | |
| GAACACATCGAGTACGATAT+GGG | - | chr7.1:29129934-29129953 | MS.gene87709:intron | 40.0% | |
| GAATGTCAAGAGAGTAGGAT+CGG | - | chr7.1:29131839-29131858 | MS.gene87709:CDS | 40.0% | |
| GAGTTTCTTCATGTGAAACC+TGG | - | chr7.1:29127718-29127737 | MS.gene87709:intron | 40.0% | |
| GCAAGTGAATGCAAGACAAA+GGG | + | chr7.1:29131928-29131947 | None:intergenic | 40.0% | |
| GCAGTAAAAGCCCTTACTTT+AGG | + | chr7.1:29128520-29128539 | None:intergenic | 40.0% | |
| GCTACCACCATAAAAAAAGG+GGG | + | chr7.1:29128931-29128950 | None:intergenic | 40.0% | |
| GCTCTTTGTAAATATAGGCG+AGG | - | chr7.1:29132031-29132050 | MS.gene87709:CDS | 40.0% | |
| GTCCCGCTCTTTGTAAATAT+AGG | - | chr7.1:29132026-29132045 | MS.gene87709:CDS | 40.0% | |
| GTCTGGATGAATCAGAAGTT+GGG | - | chr7.1:29130622-29130641 | MS.gene87709:intron | 40.0% | |
| GTGTGTCAGGTTTCATTTCA+TGG | + | chr7.1:29128815-29128834 | None:intergenic | 40.0% | |
| GTTAGACTCTTACAAACGCA+AGG | + | chr7.1:29131798-29131817 | None:intergenic | 40.0% | |
| TAAGGGAATTATGAGCTGAG+TGG | - | chr7.1:29129684-29129703 | MS.gene87709:intron | 40.0% | |
| TAGCGGCACTAAAACACTAT+AGG | + | chr7.1:29128257-29128276 | None:intergenic | 40.0% | |
| TCTCCAGAGTGAATATGAAC+AGG | + | chr7.1:29129023-29129042 | None:intergenic | 40.0% | |
| TGACACACATTGAGGCTAAT+TGG | - | chr7.1:29128827-29128846 | MS.gene87709:intron | 40.0% | |
| TGAGAAAACGGGGATTAGAA+GGG | + | chr7.1:29127447-29127466 | None:intergenic | 40.0% | |
| TGCAAGTGAATGCAAGACAA+AGG | + | chr7.1:29131929-29131948 | None:intergenic | 40.0% | |
| TGCATCATACCTACCTTCAT+GGG | - | chr7.1:29129093-29129112 | MS.gene87709:CDS | 40.0% | |
| TTGCATCATACCTACCTTCA+TGG | - | chr7.1:29129092-29129111 | MS.gene87709:CDS | 40.0% | |
| ! | AAAACCACCCTGTTTTCTTG+TGG | - | chr7.1:29130112-29130131 | MS.gene87709:intron | 40.0% |
| ! | AAAGTAAGGGCTTTTACTGC+TGG | - | chr7.1:29128520-29128539 | MS.gene87709:intron | 40.0% |
| ! | AAGTAAGGGCTTTTACTGCT+GGG | - | chr7.1:29128521-29128540 | MS.gene87709:intron | 40.0% |
| ! | AATTAGCCTCAATGTGTGTC+AGG | + | chr7.1:29128828-29128847 | None:intergenic | 40.0% |
| ! | AGGTTTGAGGGTGTGAAAAA+CGG | + | chr7.1:29130735-29130754 | None:intergenic | 40.0% |
| ! | CAATTGCGGATTGTGGAAAA+TGG | - | chr7.1:29128209-29128228 | MS.gene87709:intron | 40.0% |
| ! | CAGTGGATTTGTCTCTTTCT+TGG | + | chr7.1:29131752-29131771 | None:intergenic | 40.0% |
| ! | CCCAACCATGATTTGTAAGA+AGG | - | chr7.1:29127995-29128014 | MS.gene87709:CDS | 40.0% |
| ! | CCTAATTTGTGGAGGTAGAA+TGG | - | chr7.1:29129133-29129152 | MS.gene87709:intron | 40.0% |
| ! | CGATTGAGTTTGAGGTGAAA+TGG | - | chr7.1:29128567-29128586 | MS.gene87709:intron | 40.0% |
| ! | TGGCTTCACATTTTATTCCC+AGG | + | chr7.1:29129783-29129802 | None:intergenic | 40.0% |
| ! | TTCATGGACTTGGTATCATC+TGG | - | chr7.1:29130378-29130397 | MS.gene87709:intron | 40.0% |
| !! | AATTGAGATTTGCTGGTGAG+TGG | - | chr7.1:29129174-29129193 | MS.gene87709:intron | 40.0% |
| !! | AGAGGTTTTTGGATATCGTC+GGG | + | chr7.1:29128743-29128762 | None:intergenic | 40.0% |
| !! | ATGTATTGACTGCATGCCAA+AGG | - | chr7.1:29129820-29129839 | MS.gene87709:intron | 40.0% |
| !! | TGGACTGCAATTTGCTGTTA+TGG | - | chr7.1:29130673-29130692 | MS.gene87709:intron | 40.0% |
| !! | TTCGTTTTTCATCTCGCAAC+CGG | - | chr7.1:29128902-29128921 | MS.gene87709:intron | 40.0% |
| !! | TTTTTGGGAATAGGGGTAGA+GGG | - | chr7.1:29128096-29128115 | MS.gene87709:intron | 40.0% |
| !!! | AACTCACAAGCCGGTTTTTT+GGG | - | chr7.1:29127961-29127980 | MS.gene87709:intron | 40.0% |
| !!! | GAAACCCCCTTTTTTTATGG+TGG | - | chr7.1:29128924-29128943 | MS.gene87709:intron | 40.0% |
| AAGAAGGGTGGTTAGAGAAG+AGG | + | chr7.1:29127498-29127517 | None:intergenic | 45.0% | |
| AGTGGGGCTTACTGAGAAAA+CGG | + | chr7.1:29127459-29127478 | None:intergenic | 45.0% | |
| ATAGTCAAACTGAGCGCCTA+AGG | - | chr7.1:29128703-29128722 | MS.gene87709:intron | 45.0% | |
| ATCCACTGTGAATCCGTTGT+TGG | - | chr7.1:29131764-29131783 | MS.gene87709:intron | 45.0% | |
| ATGAAGCACGGATACGGATA+CGG | - | chr7.1:29129320-29129339 | MS.gene87709:intron | 45.0% | |
| ATGGGAGAGATTGAGCTTCA+AGG | + | chr7.1:29127356-29127375 | None:intergenic | 45.0% | |
| ATGTGTTCTGATACGCTGAC+AGG | + | chr7.1:29129922-29129941 | None:intergenic | 45.0% | |
| CAAGCTTAAGGTAGTCGATG+TGG | - | chr7.1:29131419-29131438 | MS.gene87709:intron | 45.0% | |
| CAATCCACAAGAAAACAGGG+TGG | + | chr7.1:29130119-29130138 | None:intergenic | 45.0% | |
| CGTCTGGATGAATCAGAAGT+TGG | - | chr7.1:29130621-29130640 | MS.gene87709:intron | 45.0% | |
| CTACCTCCACAAATTAGGGT+GGG | + | chr7.1:29129131-29129150 | None:intergenic | 45.0% | |
| CTGAGAAAACGGGGATTAGA+AGG | + | chr7.1:29127448-29127467 | None:intergenic | 45.0% | |
| GAGAAAACGGGGATTAGAAG+GGG | + | chr7.1:29127446-29127465 | None:intergenic | 45.0% | |
| GGTCACACATGTTAGCGAAA+AGG | + | chr7.1:29128386-29128405 | None:intergenic | 45.0% | |
| GGTCACACATTCTGGCAAAA+AGG | + | chr7.1:29128449-29128468 | None:intergenic | 45.0% | |
| GGTTGAACAAGCAACTGACA+AGG | + | chr7.1:29128872-29128891 | None:intergenic | 45.0% | |
| GTATTACCTAAGACACGCCA+AGG | + | chr7.1:29127612-29127631 | None:intergenic | 45.0% | |
| GTGCGAATAGGAAAGTTGGA+GGG | + | chr7.1:29127424-29127443 | None:intergenic | 45.0% | |
| GTTGAAAAGACCTTCAGAGC+TGG | - | chr7.1:29127796-29127815 | MS.gene87709:intron | 45.0% | |
| TAAGGTAGTCGATGTGGATC+CGG | - | chr7.1:29131425-29131444 | MS.gene87709:intron | 45.0% | |
| TCTACCTCCACAAATTAGGG+TGG | + | chr7.1:29129132-29129151 | None:intergenic | 45.0% | |
| TGCGAATAGGAAAGTTGGAG+GGG | + | chr7.1:29127423-29127442 | None:intergenic | 45.0% | |
| TGGAATATGATTGCAGGTGG+TGG | - | chr7.1:29131963-29131982 | MS.gene87709:intron | 45.0% | |
| TGGGCCTAATTGAGATTTGC+TGG | - | chr7.1:29129167-29129186 | MS.gene87709:intron | 45.0% | |
| ! | ACAAATGCAGCACCTTTTCC+AGG | + | chr7.1:29127739-29127758 | None:intergenic | 45.0% |
| ! | GTGCCGCTATTTGACAACAT+TGG | - | chr7.1:29128268-29128287 | MS.gene87709:intron | 45.0% |
| ! | TACCAACAACGGATTCACAG+TGG | + | chr7.1:29131769-29131788 | None:intergenic | 45.0% |
| ! | TTGCGGATTGTGGAAAATGG+AGG | - | chr7.1:29128212-29128231 | MS.gene87709:intron | 45.0% |
| !! | AAAAACCGGCTTGTGAGTTG+AGG | + | chr7.1:29127960-29127979 | None:intergenic | 45.0% |
| !! | ACCAGTGTGTGCTTTAAGGT+TGG | - | chr7.1:29128422-29128441 | MS.gene87709:intron | 45.0% |
| !! | CCAGTGTGTGCTTTAAGGTT+GGG | - | chr7.1:29128423-29128442 | MS.gene87709:intron | 45.0% |
| !! | CTTTTTGGGAATAGGGGTAG+AGG | - | chr7.1:29128095-29128114 | MS.gene87709:intron | 45.0% |
| !! | GAAAAGGTGCTGCATTTGTG+AGG | - | chr7.1:29127740-29127759 | MS.gene87709:intron | 45.0% |
| !! | GGCAAAGTGGATTTTGCCTT+AGG | + | chr7.1:29128722-29128741 | None:intergenic | 45.0% |
| !! | TATATGTGTCGGTGTCGTAC+CGG | - | chr7.1:29129421-29129440 | MS.gene87709:intron | 45.0% |
| !! | TCGAAGTTGATGGTTCACCT+TGG | - | chr7.1:29127592-29127611 | MS.gene87709:intron | 45.0% |
| !! | TTGCGTATGCATAGCTTGCT+AGG | - | chr7.1:29131209-29131228 | MS.gene87709:intron | 45.0% |
| !!! | ACTCACAAGCCGGTTTTTTG+GGG | - | chr7.1:29127962-29127981 | MS.gene87709:intron | 45.0% |
| !!! | CAACTCACAAGCCGGTTTTT+TGG | - | chr7.1:29127960-29127979 | MS.gene87709:intron | 45.0% |
| !!! | CCGGAAACCCCCTTTTTTTA+TGG | - | chr7.1:29128921-29128940 | MS.gene87709:intron | 45.0% |
| !!! | CGGTTTTTTGGGGTTGTGTT+AGG | - | chr7.1:29127972-29127991 | MS.gene87709:CDS | 45.0% |
| !!! | TATTTTAAACATAAAATTTA+AGG | - | chr7.1:29131281-29131300 | MS.gene87709:intron | 5.0% |
| !!! | TTTTTTTCTATTTTTTAAAA+GGG | - | chr7.1:29129876-29129895 | MS.gene87709:intron | 5.0% |
| !!! | TTTTTTTTCTATTTTTTAAA+AGG | - | chr7.1:29129875-29129894 | MS.gene87709:intron | 5.0% |
| AAGGTAGTCGATGTGGATCC+GGG | - | chr7.1:29131426-29131445 | MS.gene87709:intron | 50.0% | |
| AGACAAATTCTTTCGGGGGG+TGG | + | chr7.1:29130026-29130045 | None:intergenic | 50.0% | |
| AGCAAGAGGGTCACACATTC+TGG | + | chr7.1:29128457-29128476 | None:intergenic | 50.0% | |
| CACATCGAGTACGATATGGG+AGG | - | chr7.1:29129937-29129956 | MS.gene87709:intron | 50.0% | |
| CCCAACCTTAAAGCACACAC+TGG | + | chr7.1:29128426-29128445 | None:intergenic | 50.0% | |
| CTCCACAAATTAGGGTGGGT+CGG | + | chr7.1:29129127-29129146 | None:intergenic | 50.0% | |
| CTCTTTCTTGGATCCTGCCA+AGG | + | chr7.1:29131740-29131759 | None:intergenic | 50.0% | |
| GACAAATTCTTTCGGGGGGT+GGG | + | chr7.1:29130025-29130044 | None:intergenic | 50.0% | |
| GACCTTCAGAGCTGGAAGTT+CGG | - | chr7.1:29127804-29127823 | MS.gene87709:intron | 50.0% | |
| GATGTGGATCCGGGACTTAA+GGG | - | chr7.1:29131435-29131454 | MS.gene87709:intron | 50.0% | |
| GCAATCCTCAACTCACAAGC+CGG | - | chr7.1:29127952-29127971 | MS.gene87709:intron | 50.0% | |
| GGTGCGAATAGGAAAGTTGG+AGG | + | chr7.1:29127425-29127444 | None:intergenic | 50.0% | |
| GGTTGTTTGCCCATGAAGGT+AGG | + | chr7.1:29129105-29129124 | None:intergenic | 50.0% | |
| GTGGGGCTTACTGAGAAAAC+GGG | + | chr7.1:29127458-29127477 | None:intergenic | 50.0% | |
| TACATACGAGGAGACTCGTC+TGG | - | chr7.1:29130605-29130624 | MS.gene87709:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr7.1:29129489-29129508 | None:intergenic | 50.0% | |
| TCCACAAATTAGGGTGGGTC+GGG | + | chr7.1:29129126-29129145 | None:intergenic | 50.0% | |
| TCTGATACGCTGACAGGCAT+CGG | + | chr7.1:29129916-29129935 | None:intergenic | 50.0% | |
| TGGGGCTTACTGAGAAAACG+GGG | + | chr7.1:29127457-29127476 | None:intergenic | 50.0% | |
| TTCTTGGATCCTGCCAAGGT+GGG | + | chr7.1:29131736-29131755 | None:intergenic | 50.0% | |
| TTGGATATCGTCGGGCAAAG+TGG | + | chr7.1:29128735-29128754 | None:intergenic | 50.0% | |
| TTTCTTGGATCCTGCCAAGG+TGG | + | chr7.1:29131737-29131756 | None:intergenic | 50.0% | |
| ! | AGGGGTGCGAATAGGAAAGT+TGG | + | chr7.1:29127428-29127447 | None:intergenic | 50.0% |
| ! | GGATTAGAAGGGGTGCGAAT+AGG | + | chr7.1:29127436-29127455 | None:intergenic | 50.0% |
| ! | TACCGAACTTCCAGCTCTGA+AGG | + | chr7.1:29127809-29127828 | None:intergenic | 50.0% |
| ! | TGCTGGTGGGCCTAAAGTAA+GGG | - | chr7.1:29128507-29128526 | MS.gene87709:intron | 50.0% |
| ! | TTGCTGGTGGGCCTAAAGTA+AGG | - | chr7.1:29128506-29128525 | MS.gene87709:intron | 50.0% |
| !! | ATGCATAGCTTGCTAGGCAC+AGG | - | chr7.1:29131215-29131234 | MS.gene87709:intron | 50.0% |
| !! | GACAGGCATCGGTGAAGTAT+TGG | + | chr7.1:29129905-29129924 | None:intergenic | 50.0% |
| !! | TGCATAGCTTGCTAGGCACA+GGG | - | chr7.1:29131216-29131235 | MS.gene87709:intron | 50.0% |
| AAATTCTTTCGGGGGGTGGG+TGG | + | chr7.1:29130022-29130041 | None:intergenic | 55.0% | |
| AAGCCAGCAACTCTCGACAC+TGG | - | chr7.1:29131990-29132009 | MS.gene87709:CDS | 55.0% | |
| AATTCTTTCGGGGGGTGGGT+GGG | + | chr7.1:29130021-29130040 | None:intergenic | 55.0% | |
| ACCCGACCCACCCTAATTTG+TGG | - | chr7.1:29129122-29129141 | MS.gene87709:intron | 55.0% | |
| CACGGATACGGATACGGACA+CGG | - | chr7.1:29129326-29129345 | MS.gene87709:intron | 55.0% | |
| CGATGTGGATCCGGGACTTA+AGG | - | chr7.1:29131434-29131453 | MS.gene87709:intron | 55.0% | |
| CTTAAGGGTGACACAGCCCA+AGG | - | chr7.1:29131450-29131469 | MS.gene87709:intron | 55.0% | |
| GCTGTGTCACCCTTAAGTCC+CGG | + | chr7.1:29131447-29131466 | None:intergenic | 55.0% | |
| GGTTCACCTTGGCGTGTCTT+AGG | - | chr7.1:29127603-29127622 | MS.gene87709:intron | 55.0% | |
| GTGTCATCCCGTGTCAGACA+CGG | + | chr7.1:29129451-29129470 | None:intergenic | 55.0% | |
| GTGTCTGACACGGGATGACA+CGG | - | chr7.1:29129450-29129469 | MS.gene87709:intron | 55.0% | |
| TCTTGGATCCTGCCAAGGTG+GGG | + | chr7.1:29131735-29131754 | None:intergenic | 55.0% | |
| TGTCATCCCGTGTCAGACAC+GGG | + | chr7.1:29129450-29129469 | None:intergenic | 55.0% | |
| TGTCTGACACGGGATGACAC+GGG | - | chr7.1:29129451-29129470 | MS.gene87709:intron | 55.0% | |
| ! | CGACCCACCCTAATTTGTGG+AGG | - | chr7.1:29129125-29129144 | MS.gene87709:intron | 55.0% |
| ! | GTCGGGTTGTTTGCCCATGA+AGG | + | chr7.1:29129109-29129128 | None:intergenic | 55.0% |
| !! | GAGGAGTGTCCGTGCTTCAT+AGG | - | chr7.1:29129488-29129507 | MS.gene87709:intron | 55.0% |
| ACGGGAACACGCCTTATCCG+AGG | - | chr7.1:29129469-29129488 | MS.gene87709:intron | 60.0% | |
| CTTGGATCCTGCCAAGGTGG+GGG | + | chr7.1:29131734-29131753 | None:intergenic | 60.0% | |
| GACACGGACACGACACGACA+CGG | - | chr7.1:29129342-29129361 | MS.gene87709:intron | 60.0% | |
| GCACGGACACTCCTCGGATA+AGG | + | chr7.1:29129483-29129502 | None:intergenic | 60.0% | |
| GGTATAAAGCCCCCCCACCT+TGG | - | chr7.1:29131720-29131739 | MS.gene87709:intron | 60.0% | |
| TTGGATCCTGCCAAGGTGGG+GGG | + | chr7.1:29131733-29131752 | None:intergenic | 60.0% | |
| ! | GCACCAGTGTCGAGAGTTGC+TGG | + | chr7.1:29131996-29132015 | None:intergenic | 60.0% |
| ! | GTGGGGGGGCTTTATACCCT+AGG | + | chr7.1:29131718-29131737 | None:intergenic | 60.0% |
| CCGGTGACCCGTGTCTGACA+CGG | - | chr7.1:29129440-29129459 | MS.gene87709:intron | 65.0% | |
| CCGTGTCAGACACGGGTCAC+CGG | + | chr7.1:29129443-29129462 | None:intergenic | 65.0% | |
| CGGTGACCCGTGTCTGACAC+GGG | - | chr7.1:29129441-29129460 | MS.gene87709:intron | 65.0% | |
| TAAAGCCCCCCCACCTTGGC+AGG | - | chr7.1:29131724-29131743 | MS.gene87709:intron | 65.0% | |
| TGGATCCTGCCAAGGTGGGG+GGG | + | chr7.1:29131732-29131751 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 29127334 | 29132100 | 29127334 | ID=MS.gene87709 |
| chr7.1 | mRNA | 29127334 | 29132100 | 29127334 | ID=MS.gene87709.t1;Parent=MS.gene87709 |
| chr7.1 | exon | 29131968 | 29132100 | 29131968 | ID=MS.gene87709.t1.exon1;Parent=MS.gene87709.t1 |
| chr7.1 | CDS | 29131968 | 29132100 | 29131968 | ID=cds.MS.gene87709.t1;Parent=MS.gene87709.t1 |
| chr7.1 | exon | 29131810 | 29131887 | 29131810 | ID=MS.gene87709.t1.exon2;Parent=MS.gene87709.t1 |
| chr7.1 | CDS | 29131810 | 29131887 | 29131810 | ID=cds.MS.gene87709.t1;Parent=MS.gene87709.t1 |
| chr7.1 | exon | 29131609 | 29131715 | 29131609 | ID=MS.gene87709.t1.exon3;Parent=MS.gene87709.t1 |
| chr7.1 | CDS | 29131609 | 29131715 | 29131609 | ID=cds.MS.gene87709.t1;Parent=MS.gene87709.t1 |
| chr7.1 | exon | 29129045 | 29129122 | 29129045 | ID=MS.gene87709.t1.exon4;Parent=MS.gene87709.t1 |
| chr7.1 | CDS | 29129045 | 29129122 | 29129045 | ID=cds.MS.gene87709.t1;Parent=MS.gene87709.t1 |
| chr7.1 | exon | 29128730 | 29128831 | 29128730 | ID=MS.gene87709.t1.exon5;Parent=MS.gene87709.t1 |
| chr7.1 | CDS | 29128730 | 29128831 | 29128730 | ID=cds.MS.gene87709.t1;Parent=MS.gene87709.t1 |
| chr7.1 | exon | 29127963 | 29128044 | 29127963 | ID=MS.gene87709.t1.exon6;Parent=MS.gene87709.t1 |
| chr7.1 | CDS | 29127963 | 29128044 | 29127963 | ID=cds.MS.gene87709.t1;Parent=MS.gene87709.t1 |
| chr7.1 | exon | 29127334 | 29127455 | 29127334 | ID=MS.gene87709.t1.exon7;Parent=MS.gene87709.t1 |
| chr7.1 | CDS | 29127334 | 29127455 | 29127334 | ID=cds.MS.gene87709.t1;Parent=MS.gene87709.t1 |
| Gene Sequence |
| Protein sequence |
