Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91215.t1 | XP_003596715.1 | 57.2 | 264 | 10 | 1 | 1 | 161 | 56 | 319 | 1.60E-65 | 258.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91215.t1 | Q9FLC0 | 70.9 | 117 | 34 | 0 | 1 | 117 | 60 | 176 | 4.8e-42 | 172.2 |
MS.gene91215.t1 | Q9FLC0 | 57.5 | 40 | 17 | 0 | 122 | 161 | 285 | 324 | 3.6e-05 | 49.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91215.t1 | G7IM80 | 57.2 | 264 | 10 | 1 | 1 | 161 | 56 | 319 | 1.2e-65 | 258.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene91215 | -0.815288 | 9.98E-52 | -1.69E-46 |
MS.gene049222 | MS.gene91215 | -0.800433 | 1.44E-48 | -1.69E-46 |
MS.gene04932 | MS.gene91215 | 0.839731 | 1.33E-57 | -1.69E-46 |
MS.gene049549 | MS.gene91215 | 0.809999 | 1.43E-50 | -1.69E-46 |
MS.gene049633 | MS.gene91215 | -0.806097 | 9.71E-50 | -1.69E-46 |
MS.gene050170 | MS.gene91215 | -0.818978 | 1.48E-52 | -1.69E-46 |
MS.gene050577 | MS.gene91215 | -0.8209 | 5.37E-53 | -1.69E-46 |
MS.gene050747 | MS.gene91215 | -0.807175 | 5.75E-50 | -1.69E-46 |
MS.gene050809 | MS.gene91215 | 0.822109 | 2.82E-53 | -1.69E-46 |
MS.gene05080 | MS.gene91215 | -0.80633 | 8.67E-50 | -1.69E-46 |
MS.gene050868 | MS.gene91215 | -0.821321 | 4.30E-53 | -1.69E-46 |
MS.gene050871 | MS.gene91215 | -0.820189 | 7.82E-53 | -1.69E-46 |
MS.gene050950 | MS.gene91215 | -0.800392 | 1.47E-48 | -1.69E-46 |
MS.gene05104 | MS.gene91215 | 0.828697 | 7.79E-55 | -1.69E-46 |
MS.gene051138 | MS.gene91215 | 0.804134 | 2.50E-49 | -1.69E-46 |
MS.gene051552 | MS.gene91215 | 0.829434 | 5.16E-55 | -1.69E-46 |
MS.gene051651 | MS.gene91215 | 0.804918 | 1.72E-49 | -1.69E-46 |
MS.gene051838 | MS.gene91215 | -0.828166 | 1.05E-54 | -1.69E-46 |
MS.gene051874 | MS.gene91215 | -0.802793 | 4.74E-49 | -1.69E-46 |
MS.gene052129 | MS.gene91215 | 0.805758 | 1.14E-49 | -1.69E-46 |
MS.gene052164 | MS.gene91215 | -0.812782 | 3.57E-51 | -1.69E-46 |
MS.gene05240 | MS.gene91215 | 0.834283 | 3.28E-56 | -1.69E-46 |
MS.gene052501 | MS.gene91215 | -0.805059 | 1.60E-49 | -1.69E-46 |
MS.gene052503 | MS.gene91215 | -0.8303 | 3.17E-55 | -1.69E-46 |
MS.gene052606 | MS.gene91215 | 0.845119 | 4.95E-59 | -1.69E-46 |
MS.gene052702 | MS.gene91215 | 0.861097 | 1.30E-63 | -1.69E-46 |
MS.gene052823 | MS.gene91215 | -0.832033 | 1.19E-55 | -1.69E-46 |
MS.gene052825 | MS.gene91215 | -0.831653 | 1.48E-55 | -1.69E-46 |
MS.gene053033 | MS.gene91215 | 0.802896 | 4.51E-49 | -1.69E-46 |
MS.gene053203 | MS.gene91215 | -0.812153 | 4.89E-51 | -1.69E-46 |
MS.gene053479 | MS.gene91215 | -0.82298 | 1.77E-53 | -1.69E-46 |
MS.gene053824 | MS.gene91215 | -0.812897 | 3.36E-51 | -1.69E-46 |
MS.gene053887 | MS.gene91215 | 0.800651 | 1.30E-48 | -1.69E-46 |
MS.gene054277 | MS.gene91215 | 0.806646 | 7.44E-50 | -1.69E-46 |
MS.gene054290 | MS.gene91215 | 0.833245 | 5.96E-56 | -1.69E-46 |
MS.gene054706 | MS.gene91215 | 0.832725 | 8.03E-56 | -1.69E-46 |
MS.gene05470 | MS.gene91215 | -0.814399 | 1.57E-51 | -1.69E-46 |
MS.gene054742 | MS.gene91215 | 0.825436 | 4.69E-54 | -1.69E-46 |
MS.gene054884 | MS.gene91215 | 0.844444 | 7.53E-59 | -1.69E-46 |
MS.gene055158 | MS.gene91215 | 0.820138 | 8.04E-53 | -1.69E-46 |
MS.gene055159 | MS.gene91215 | 0.802747 | 4.85E-49 | -1.69E-46 |
MS.gene055502 | MS.gene91215 | -0.815865 | 7.43E-52 | -1.69E-46 |
MS.gene055577 | MS.gene91215 | -0.827498 | 1.51E-54 | -1.69E-46 |
MS.gene055616 | MS.gene91215 | 0.801005 | 1.10E-48 | -1.69E-46 |
MS.gene055617 | MS.gene91215 | 0.810046 | 1.40E-50 | -1.69E-46 |
MS.gene055618 | MS.gene91215 | 0.8135 | 2.48E-51 | -1.69E-46 |
MS.gene055748 | MS.gene91215 | -0.814989 | 1.16E-51 | -1.69E-46 |
MS.gene055751 | MS.gene91215 | -0.808086 | 3.68E-50 | -1.69E-46 |
MS.gene05589 | MS.gene91215 | -0.837046 | 6.55E-57 | -1.69E-46 |
MS.gene056387 | MS.gene91215 | -0.802954 | 4.39E-49 | -1.69E-46 |
MS.gene056504 | MS.gene91215 | -0.812866 | 3.42E-51 | -1.69E-46 |
MS.gene056590 | MS.gene91215 | 0.840704 | 7.41E-58 | -1.69E-46 |
MS.gene056591 | MS.gene91215 | 0.840974 | 6.29E-58 | -1.69E-46 |
MS.gene056678 | MS.gene91215 | 0.802752 | 4.83E-49 | -1.69E-46 |
MS.gene056688 | MS.gene91215 | 0.827128 | 1.86E-54 | -1.69E-46 |
MS.gene056694 | MS.gene91215 | 0.839834 | 1.25E-57 | -1.69E-46 |
MS.gene056697 | MS.gene91215 | 0.865983 | 3.97E-65 | -1.69E-46 |
MS.gene056748 | MS.gene91215 | 0.810446 | 1.15E-50 | -1.69E-46 |
MS.gene056856 | MS.gene91215 | 0.836683 | 8.10E-57 | -1.69E-46 |
MS.gene056920 | MS.gene91215 | 0.825706 | 4.05E-54 | -1.69E-46 |
MS.gene057261 | MS.gene91215 | 0.828948 | 6.77E-55 | -1.69E-46 |
MS.gene057332 | MS.gene91215 | -0.801959 | 7.04E-49 | -1.69E-46 |
MS.gene057544 | MS.gene91215 | 0.832334 | 1.00E-55 | -1.69E-46 |
MS.gene057547 | MS.gene91215 | 0.800493 | 1.40E-48 | -1.69E-46 |
MS.gene057548 | MS.gene91215 | 0.802423 | 5.65E-49 | -1.69E-46 |
MS.gene057658 | MS.gene91215 | -0.807124 | 5.89E-50 | -1.69E-46 |
MS.gene057768 | MS.gene91215 | 0.816109 | 6.55E-52 | -1.69E-46 |
MS.gene058158 | MS.gene91215 | 0.815694 | 8.11E-52 | -1.69E-46 |
MS.gene058334 | MS.gene91215 | 0.829309 | 5.53E-55 | -1.69E-46 |
MS.gene058382 | MS.gene91215 | 0.822196 | 2.70E-53 | -1.69E-46 |
MS.gene058418 | MS.gene91215 | 0.840711 | 7.38E-58 | -1.69E-46 |
MS.gene058544 | MS.gene91215 | -0.820179 | 7.86E-53 | -1.69E-46 |
MS.gene058603 | MS.gene91215 | 0.824757 | 6.79E-54 | -1.69E-46 |
MS.gene058838 | MS.gene91215 | -0.840536 | 8.20E-58 | -1.69E-46 |
MS.gene059023 | MS.gene91215 | -0.819335 | 1.23E-52 | -1.69E-46 |
MS.gene05914 | MS.gene91215 | -0.813606 | 2.35E-51 | -1.69E-46 |
MS.gene05926 | MS.gene91215 | 0.832224 | 1.07E-55 | -1.69E-46 |
MS.gene059315 | MS.gene91215 | 0.811129 | 8.17E-51 | -1.69E-46 |
MS.gene059402 | MS.gene91215 | 0.807948 | 3.94E-50 | -1.69E-46 |
MS.gene05960 | MS.gene91215 | 0.819162 | 1.34E-52 | -1.69E-46 |
MS.gene059667 | MS.gene91215 | -0.800894 | 1.16E-48 | -1.69E-46 |
MS.gene059703 | MS.gene91215 | 0.804003 | 2.66E-49 | -1.69E-46 |
MS.gene059955 | MS.gene91215 | 0.813561 | 2.40E-51 | -1.69E-46 |
MS.gene06000 | MS.gene91215 | -0.815144 | 1.07E-51 | -1.69E-46 |
MS.gene060087 | MS.gene91215 | 0.836975 | 6.83E-57 | -1.69E-46 |
MS.gene06027 | MS.gene91215 | -0.814164 | 1.77E-51 | -1.69E-46 |
MS.gene060405 | MS.gene91215 | 0.840014 | 1.12E-57 | -1.69E-46 |
MS.gene060593 | MS.gene91215 | 0.830664 | 2.59E-55 | -1.69E-46 |
MS.gene060762 | MS.gene91215 | -0.811432 | 7.02E-51 | -1.69E-46 |
MS.gene060982 | MS.gene91215 | -0.815598 | 8.52E-52 | -1.69E-46 |
MS.gene061044 | MS.gene91215 | 0.821434 | 4.05E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91215.t1 | MTR_2g084000 | 93.333 | 120 | 8 | 0 | 1 | 120 | 56 | 175 | 6.01e-78 | 234 |
MS.gene91215.t1 | MTR_2g084000 | 95.122 | 41 | 2 | 0 | 121 | 161 | 279 | 319 | 6.63e-20 | 84.3 |
MS.gene91215.t1 | MTR_2g084020 | 89.167 | 120 | 13 | 0 | 1 | 120 | 55 | 174 | 8.44e-74 | 224 |
MS.gene91215.t1 | MTR_2g084020 | 82.500 | 40 | 7 | 0 | 122 | 161 | 279 | 318 | 5.96e-16 | 73.6 |
MS.gene91215.t1 | MTR_2g084010 | 86.667 | 120 | 16 | 0 | 1 | 120 | 55 | 174 | 5.88e-72 | 219 |
MS.gene91215.t1 | MTR_2g084010 | 80.000 | 40 | 8 | 0 | 122 | 161 | 279 | 318 | 1.84e-14 | 69.7 |
MS.gene91215.t1 | MTR_2g084110 | 85.833 | 120 | 17 | 0 | 1 | 120 | 55 | 174 | 6.96e-71 | 216 |
MS.gene91215.t1 | MTR_2g084110 | 77.500 | 40 | 9 | 0 | 122 | 161 | 278 | 317 | 1.03e-14 | 70.1 |
MS.gene91215.t1 | MTR_2g084080 | 85.833 | 120 | 17 | 0 | 1 | 120 | 55 | 174 | 1.79e-70 | 215 |
MS.gene91215.t1 | MTR_2g084080 | 82.500 | 40 | 7 | 0 | 122 | 161 | 278 | 317 | 6.88e-16 | 73.6 |
MS.gene91215.t1 | MTR_2g084090 | 63.522 | 159 | 46 | 1 | 1 | 159 | 55 | 201 | 6.53e-65 | 201 |
MS.gene91215.t1 | MTR_2g084090 | 82.500 | 40 | 7 | 0 | 122 | 161 | 279 | 318 | 5.34e-15 | 71.2 |
MS.gene91215.t1 | MTR_3g094650 | 70.000 | 120 | 36 | 0 | 1 | 120 | 58 | 177 | 3.48e-55 | 176 |
MS.gene91215.t1 | MTR_5g083860 | 69.231 | 117 | 36 | 0 | 1 | 117 | 61 | 177 | 2.07e-54 | 174 |
MS.gene91215.t1 | MTR_3g094630 | 72.500 | 120 | 33 | 0 | 1 | 120 | 58 | 177 | 2.53e-53 | 171 |
MS.gene91215.t1 | MTR_3g094670 | 72.500 | 120 | 33 | 0 | 1 | 120 | 58 | 177 | 3.78e-53 | 171 |
MS.gene91215.t1 | MTR_7g072510 | 69.231 | 117 | 36 | 0 | 1 | 117 | 50 | 166 | 2.06e-52 | 169 |
MS.gene91215.t1 | MTR_7g072480 | 67.521 | 117 | 38 | 0 | 1 | 117 | 54 | 170 | 4.82e-50 | 163 |
MS.gene91215.t1 | MTR_3g072190 | 65.812 | 117 | 40 | 0 | 1 | 117 | 56 | 172 | 8.70e-50 | 162 |
MS.gene91215.t1 | MTR_3g466200 | 61.864 | 118 | 44 | 1 | 1 | 117 | 55 | 172 | 2.69e-48 | 159 |
MS.gene91215.t1 | MTR_5g021060 | 60.656 | 122 | 47 | 1 | 1 | 121 | 60 | 181 | 3.67e-47 | 156 |
MS.gene91215.t1 | MTR_4g122640 | 61.538 | 117 | 45 | 0 | 1 | 117 | 68 | 184 | 3.79e-47 | 156 |
MS.gene91215.t1 | MTR_4g029200 | 52.761 | 163 | 66 | 4 | 1 | 161 | 76 | 229 | 1.00e-46 | 155 |
MS.gene91215.t1 | MTR_8g076820 | 59.836 | 122 | 48 | 1 | 1 | 121 | 60 | 181 | 1.80e-46 | 154 |
MS.gene91215.t1 | MTR_1g022970 | 57.937 | 126 | 52 | 1 | 1 | 126 | 76 | 200 | 3.00e-46 | 154 |
MS.gene91215.t1 | MTR_7g093370 | 50.625 | 160 | 66 | 2 | 3 | 161 | 101 | 248 | 1.37e-45 | 153 |
MS.gene91215.t1 | MTR_1g054205 | 49.057 | 159 | 68 | 2 | 1 | 158 | 54 | 200 | 3.25e-45 | 151 |
MS.gene91215.t1 | MTR_4g074980 | 60.684 | 117 | 46 | 0 | 1 | 117 | 55 | 171 | 4.58e-45 | 148 |
MS.gene91215.t1 | MTR_5g074970 | 63.559 | 118 | 42 | 1 | 1 | 117 | 60 | 177 | 5.35e-45 | 150 |
MS.gene91215.t1 | MTR_4g029180 | 61.983 | 121 | 44 | 2 | 1 | 119 | 57 | 177 | 5.41e-45 | 150 |
MS.gene91215.t1 | MTR_4g074990 | 61.538 | 117 | 45 | 0 | 1 | 117 | 54 | 170 | 9.09e-45 | 149 |
MS.gene91215.t1 | MTR_4g074980 | 60.684 | 117 | 46 | 0 | 1 | 117 | 55 | 171 | 1.01e-44 | 149 |
MS.gene91215.t1 | MTR_7g026990 | 54.545 | 143 | 55 | 3 | 1 | 141 | 61 | 195 | 1.18e-44 | 149 |
MS.gene91215.t1 | MTR_5g017850 | 61.017 | 118 | 45 | 1 | 1 | 118 | 57 | 173 | 1.62e-44 | 149 |
MS.gene91215.t1 | MTR_4g083710 | 61.538 | 117 | 45 | 0 | 1 | 117 | 57 | 173 | 1.74e-44 | 149 |
MS.gene91215.t1 | MTR_1g115900 | 63.248 | 117 | 42 | 1 | 1 | 117 | 57 | 172 | 1.87e-44 | 149 |
MS.gene91215.t1 | MTR_4g029170 | 61.157 | 121 | 45 | 2 | 1 | 119 | 57 | 177 | 3.29e-44 | 148 |
MS.gene91215.t1 | MTR_5g074860 | 60.833 | 120 | 44 | 2 | 1 | 117 | 59 | 178 | 5.51e-44 | 146 |
MS.gene91215.t1 | MTR_5g017860 | 59.322 | 118 | 47 | 1 | 1 | 118 | 57 | 173 | 1.32e-43 | 147 |
MS.gene91215.t1 | MTR_5g074860 | 60.833 | 120 | 44 | 2 | 1 | 117 | 59 | 178 | 1.75e-43 | 146 |
MS.gene91215.t1 | MTR_4g029190 | 58.974 | 117 | 48 | 0 | 1 | 117 | 76 | 192 | 3.93e-43 | 146 |
MS.gene91215.t1 | MTR_5g074760 | 60.833 | 120 | 44 | 2 | 1 | 117 | 55 | 174 | 4.98e-43 | 145 |
MS.gene91215.t1 | MTR_5g074740 | 60.833 | 120 | 44 | 2 | 1 | 117 | 55 | 174 | 6.30e-43 | 145 |
MS.gene91215.t1 | MTR_4g125940 | 59.829 | 117 | 45 | 1 | 1 | 117 | 3 | 117 | 3.66e-42 | 142 |
MS.gene91215.t1 | MTR_4g125940 | 59.829 | 117 | 45 | 1 | 1 | 117 | 58 | 172 | 9.53e-42 | 142 |
MS.gene91215.t1 | MTR_5g014100 | 58.974 | 117 | 48 | 0 | 1 | 117 | 56 | 172 | 1.21e-41 | 142 |
MS.gene91215.t1 | MTR_2g040000 | 60.684 | 117 | 44 | 1 | 1 | 117 | 59 | 173 | 1.40e-41 | 142 |
MS.gene91215.t1 | MTR_5g074710 | 60.000 | 120 | 45 | 2 | 1 | 117 | 55 | 174 | 1.90e-41 | 141 |
MS.gene91215.t1 | MTR_3g466180 | 63.248 | 117 | 43 | 0 | 1 | 117 | 61 | 177 | 4.97e-41 | 140 |
MS.gene91215.t1 | MTR_2g029740 | 58.120 | 117 | 49 | 0 | 1 | 117 | 59 | 175 | 5.85e-41 | 140 |
MS.gene91215.t1 | MTR_5g049280 | 54.310 | 116 | 53 | 0 | 2 | 117 | 64 | 179 | 6.61e-41 | 140 |
MS.gene91215.t1 | MTR_2g029750 | 58.974 | 117 | 48 | 0 | 1 | 117 | 59 | 175 | 1.22e-40 | 140 |
MS.gene91215.t1 | MTR_2g029815 | 56.410 | 117 | 51 | 0 | 1 | 117 | 59 | 175 | 2.04e-40 | 139 |
MS.gene91215.t1 | MTR_2g029830 | 45.223 | 157 | 74 | 2 | 1 | 157 | 58 | 202 | 3.61e-40 | 138 |
MS.gene91215.t1 | MTR_2g029560 | 53.846 | 117 | 54 | 0 | 1 | 117 | 54 | 170 | 8.09e-40 | 137 |
MS.gene91215.t1 | MTR_2g028980 | 56.410 | 117 | 51 | 0 | 1 | 117 | 59 | 175 | 2.09e-39 | 136 |
MS.gene91215.t1 | MTR_2g029860 | 54.400 | 125 | 54 | 1 | 1 | 125 | 59 | 180 | 4.84e-39 | 135 |
MS.gene91215.t1 | MTR_3g072190 | 61.538 | 104 | 40 | 0 | 14 | 117 | 2 | 105 | 8.23e-39 | 132 |
MS.gene91215.t1 | MTR_4g030890 | 54.783 | 115 | 52 | 0 | 3 | 117 | 132 | 246 | 1.37e-38 | 135 |
MS.gene91215.t1 | MTR_3g467600 | 54.545 | 121 | 52 | 2 | 1 | 118 | 57 | 177 | 3.82e-38 | 132 |
MS.gene91215.t1 | MTR_2g029800 | 55.556 | 117 | 52 | 0 | 1 | 117 | 59 | 175 | 6.80e-38 | 132 |
MS.gene91215.t1 | MTR_2g029730 | 51.220 | 123 | 57 | 1 | 1 | 123 | 55 | 174 | 9.89e-38 | 132 |
MS.gene91215.t1 | MTR_2g029910 | 55.556 | 108 | 48 | 0 | 3 | 110 | 62 | 169 | 1.96e-37 | 131 |
MS.gene91215.t1 | MTR_4g031140 | 50.407 | 123 | 59 | 1 | 3 | 123 | 60 | 182 | 2.20e-37 | 131 |
MS.gene91215.t1 | MTR_2g029820 | 44.025 | 159 | 77 | 2 | 1 | 159 | 59 | 205 | 3.32e-37 | 130 |
MS.gene91215.t1 | MTR_4g074995 | 60.606 | 99 | 39 | 0 | 1 | 99 | 54 | 152 | 1.61e-36 | 128 |
MS.gene91215.t1 | MTR_2g029850 | 53.913 | 115 | 53 | 0 | 3 | 117 | 61 | 175 | 3.36e-36 | 128 |
MS.gene91215.t1 | MTR_2g088770 | 51.667 | 120 | 56 | 2 | 1 | 120 | 56 | 173 | 4.08e-36 | 127 |
MS.gene91215.t1 | MTR_7g072490 | 60.417 | 96 | 38 | 0 | 17 | 112 | 2 | 97 | 4.37e-36 | 124 |
MS.gene91215.t1 | MTR_5g022870 | 52.137 | 117 | 54 | 2 | 3 | 119 | 55 | 169 | 1.91e-35 | 125 |
MS.gene91215.t1 | MTR_7g086820 | 49.153 | 118 | 57 | 2 | 3 | 120 | 52 | 166 | 2.21e-35 | 125 |
MS.gene91215.t1 | MTR_3g092990 | 45.833 | 120 | 65 | 0 | 1 | 120 | 56 | 175 | 4.26e-34 | 122 |
MS.gene91215.t1 | MTR_4g046713 | 48.333 | 120 | 61 | 1 | 1 | 120 | 57 | 175 | 5.16e-34 | 122 |
MS.gene91215.t1 | MTR_3g072260 | 69.231 | 78 | 24 | 0 | 1 | 78 | 56 | 133 | 6.30e-34 | 116 |
MS.gene91215.t1 | MTR_8g075100 | 48.718 | 117 | 58 | 2 | 3 | 119 | 58 | 172 | 1.46e-33 | 120 |
MS.gene91215.t1 | MTR_6g027440 | 52.174 | 115 | 52 | 2 | 1 | 115 | 51 | 162 | 2.46e-33 | 120 |
MS.gene91215.t1 | MTR_0155s0040 | 45.378 | 119 | 63 | 2 | 1 | 119 | 57 | 173 | 3.39e-32 | 117 |
MS.gene91215.t1 | MTR_2g078280 | 51.724 | 116 | 53 | 2 | 1 | 114 | 106 | 220 | 5.38e-32 | 117 |
MS.gene91215.t1 | MTR_1g025980 | 45.865 | 133 | 68 | 4 | 3 | 135 | 56 | 184 | 6.16e-32 | 116 |
MS.gene91215.t1 | MTR_2g077990 | 51.724 | 116 | 53 | 2 | 1 | 114 | 106 | 220 | 6.23e-32 | 118 |
MS.gene91215.t1 | MTR_7g086870 | 50.435 | 115 | 54 | 2 | 1 | 115 | 52 | 163 | 6.24e-32 | 116 |
MS.gene91215.t1 | MTR_2g029830 | 42.553 | 141 | 69 | 2 | 17 | 157 | 6 | 134 | 1.63e-31 | 114 |
MS.gene91215.t1 | MTR_2g078610 | 52.679 | 112 | 50 | 2 | 1 | 110 | 106 | 216 | 1.67e-31 | 117 |
MS.gene91215.t1 | MTR_1g101830 | 48.718 | 117 | 58 | 2 | 3 | 119 | 59 | 173 | 3.41e-31 | 114 |
MS.gene91215.t1 | MTR_2g067440 | 49.565 | 115 | 56 | 2 | 1 | 115 | 90 | 202 | 3.72e-31 | 115 |
MS.gene91215.t1 | MTR_2g008710 | 54.717 | 106 | 43 | 3 | 5 | 110 | 61 | 161 | 5.66e-31 | 114 |
MS.gene91215.t1 | MTR_4g114210 | 50.000 | 122 | 55 | 4 | 5 | 126 | 55 | 170 | 8.37e-30 | 110 |
MS.gene91215.t1 | MTR_2g437770 | 44.355 | 124 | 64 | 3 | 1 | 124 | 80 | 198 | 2.96e-29 | 109 |
MS.gene91215.t1 | MTR_7g029030 | 41.912 | 136 | 56 | 3 | 2 | 126 | 56 | 179 | 4.84e-28 | 106 |
MS.gene91215.t1 | MTR_7g086785 | 39.310 | 145 | 75 | 2 | 17 | 161 | 4 | 135 | 7.29e-28 | 101 |
MS.gene91215.t1 | MTR_1g077000 | 44.444 | 117 | 63 | 2 | 1 | 117 | 69 | 183 | 9.94e-28 | 105 |
MS.gene91215.t1 | MTR_2g008160 | 51.961 | 102 | 46 | 2 | 2 | 103 | 55 | 153 | 1.51e-27 | 102 |
MS.gene91215.t1 | MTR_1g009750 | 45.299 | 117 | 62 | 1 | 6 | 120 | 62 | 178 | 1.99e-27 | 104 |
MS.gene91215.t1 | MTR_4g133800 | 50.962 | 104 | 47 | 2 | 1 | 104 | 71 | 170 | 3.59e-27 | 104 |
MS.gene91215.t1 | MTR_1g038680 | 48.673 | 113 | 55 | 2 | 1 | 110 | 59 | 171 | 4.40e-27 | 103 |
MS.gene91215.t1 | MTR_4g095450 | 48.305 | 118 | 58 | 2 | 6 | 120 | 62 | 179 | 5.76e-27 | 103 |
MS.gene91215.t1 | MTR_7g107520 | 45.833 | 120 | 62 | 2 | 1 | 120 | 55 | 171 | 8.89e-27 | 102 |
MS.gene91215.t1 | MTR_2g008160 | 52.475 | 101 | 45 | 2 | 3 | 103 | 56 | 153 | 1.40e-26 | 101 |
MS.gene91215.t1 | MTR_2g008160 | 52.475 | 101 | 45 | 2 | 3 | 103 | 56 | 153 | 3.13e-26 | 101 |
MS.gene91215.t1 | MTR_2g067450 | 48.148 | 108 | 53 | 2 | 10 | 115 | 49 | 155 | 3.57e-26 | 101 |
MS.gene91215.t1 | MTR_4g087965 | 45.238 | 126 | 66 | 2 | 2 | 124 | 73 | 198 | 3.69e-26 | 101 |
MS.gene91215.t1 | MTR_1g086320 | 44.248 | 113 | 61 | 1 | 1 | 111 | 60 | 172 | 4.24e-26 | 101 |
MS.gene91215.t1 | MTR_3g092990 | 46.154 | 104 | 56 | 0 | 17 | 120 | 61 | 164 | 4.79e-26 | 100 |
MS.gene91215.t1 | MTR_1g086490 | 45.045 | 111 | 59 | 1 | 3 | 111 | 62 | 172 | 1.26e-25 | 100 |
MS.gene91215.t1 | MTR_1g066710 | 42.149 | 121 | 68 | 2 | 2 | 121 | 58 | 177 | 1.60e-25 | 99.8 |
MS.gene91215.t1 | MTR_4g132490 | 44.037 | 109 | 61 | 0 | 3 | 111 | 61 | 169 | 2.43e-25 | 99.4 |
MS.gene91215.t1 | MTR_4g127670 | 47.458 | 118 | 56 | 3 | 6 | 120 | 59 | 173 | 3.55e-25 | 98.6 |
MS.gene91215.t1 | MTR_6g043280 | 51.376 | 109 | 46 | 4 | 5 | 110 | 75 | 179 | 1.68e-24 | 97.1 |
MS.gene91215.t1 | MTR_0286s0010 | 43.200 | 125 | 69 | 2 | 2 | 124 | 65 | 189 | 1.82e-24 | 97.1 |
MS.gene91215.t1 | MTR_6g008075 | 43.200 | 125 | 69 | 2 | 2 | 124 | 65 | 189 | 1.82e-24 | 97.1 |
MS.gene91215.t1 | MTR_5g016010 | 45.763 | 118 | 61 | 2 | 6 | 120 | 62 | 179 | 4.10e-24 | 95.9 |
MS.gene91215.t1 | MTR_3g105790 | 40.833 | 120 | 67 | 1 | 5 | 124 | 59 | 174 | 6.93e-24 | 95.1 |
MS.gene91215.t1 | MTR_1g066680 | 43.697 | 119 | 65 | 2 | 4 | 121 | 59 | 176 | 2.50e-23 | 94.0 |
MS.gene91215.t1 | MTR_1g066640 | 42.857 | 119 | 66 | 2 | 4 | 121 | 60 | 177 | 4.34e-23 | 93.2 |
MS.gene91215.t1 | MTR_1g066380 | 41.228 | 114 | 66 | 1 | 4 | 117 | 60 | 172 | 2.17e-22 | 91.3 |
MS.gene91215.t1 | MTR_1g090760 | 42.453 | 106 | 59 | 2 | 5 | 108 | 62 | 167 | 3.06e-22 | 90.9 |
MS.gene91215.t1 | MTR_2g099175 | 47.706 | 109 | 52 | 3 | 3 | 111 | 68 | 171 | 4.35e-22 | 90.5 |
MS.gene91215.t1 | MTR_6g043240 | 35.714 | 154 | 82 | 4 | 5 | 157 | 76 | 213 | 1.76e-21 | 89.4 |
MS.gene91215.t1 | MTR_8g062780 | 42.991 | 107 | 60 | 1 | 6 | 111 | 58 | 164 | 3.03e-21 | 88.2 |
MS.gene91215.t1 | MTR_0147s0010 | 39.024 | 123 | 61 | 3 | 4 | 126 | 110 | 218 | 1.24e-20 | 87.0 |
MS.gene91215.t1 | MTR_6g043460 | 43.243 | 111 | 61 | 2 | 5 | 113 | 70 | 180 | 9.25e-20 | 84.3 |
MS.gene91215.t1 | MTR_7g086790 | 39.252 | 107 | 61 | 2 | 18 | 124 | 17 | 119 | 1.36e-19 | 81.3 |
MS.gene91215.t1 | MTR_4g132110 | 40.351 | 114 | 67 | 1 | 4 | 117 | 65 | 177 | 1.69e-19 | 83.6 |
MS.gene91215.t1 | MTR_6g048160 | 54.167 | 72 | 29 | 2 | 10 | 81 | 22 | 89 | 6.73e-19 | 77.0 |
MS.gene91215.t1 | MTR_2g008730 | 47.872 | 94 | 46 | 3 | 33 | 126 | 62 | 152 | 2.91e-18 | 79.7 |
MS.gene91215.t1 | MTR_5g033470 | 39.535 | 129 | 69 | 6 | 3 | 126 | 105 | 229 | 3.69e-18 | 80.1 |
MS.gene91215.t1 | MTR_5g074700 | 49.383 | 81 | 38 | 2 | 42 | 119 | 3 | 83 | 1.34e-17 | 76.6 |
MS.gene91215.t1 | MTR_4g132110 | 38.655 | 119 | 67 | 2 | 4 | 117 | 65 | 182 | 1.93e-17 | 78.2 |
MS.gene91215.t1 | MTR_4g114220 | 51.316 | 76 | 27 | 2 | 5 | 80 | 37 | 102 | 3.46e-17 | 73.9 |
MS.gene91215.t1 | MTR_1g066380 | 38.835 | 103 | 62 | 1 | 15 | 117 | 3 | 104 | 5.49e-17 | 75.9 |
MS.gene91215.t1 | MTR_1g009750 | 32.773 | 119 | 57 | 2 | 6 | 120 | 62 | 161 | 3.83e-13 | 65.9 |
MS.gene91215.t1 | MTR_3g105790 | 37.363 | 91 | 57 | 0 | 34 | 124 | 8 | 98 | 7.67e-13 | 64.3 |
MS.gene91215.t1 | MTR_1g089005 | 46.988 | 83 | 37 | 2 | 1 | 77 | 45 | 126 | 1.20e-12 | 62.4 |
MS.gene91215.t1 | MTR_7g086810 | 35.632 | 87 | 30 | 1 | 3 | 89 | 38 | 98 | 3.92e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene91215.t1 | AT5G05340 | 70.940 | 117 | 34 | 0 | 1 | 117 | 60 | 176 | 8.35e-57 | 181 |
MS.gene91215.t1 | AT1G44970 | 62.698 | 126 | 46 | 1 | 1 | 126 | 75 | 199 | 5.38e-50 | 164 |
MS.gene91215.t1 | AT1G49570 | 61.864 | 118 | 45 | 0 | 1 | 118 | 78 | 195 | 1.02e-48 | 160 |
MS.gene91215.t1 | AT5G06720 | 50.311 | 161 | 68 | 1 | 1 | 161 | 62 | 210 | 1.98e-48 | 159 |
MS.gene91215.t1 | AT5G66390 | 59.524 | 126 | 50 | 1 | 1 | 126 | 63 | 187 | 2.83e-48 | 159 |
MS.gene91215.t1 | AT4G16270 | 62.393 | 117 | 44 | 0 | 1 | 117 | 80 | 196 | 9.16e-48 | 158 |
MS.gene91215.t1 | AT5G58390 | 58.824 | 136 | 53 | 3 | 1 | 135 | 51 | 184 | 1.31e-47 | 157 |
MS.gene91215.t1 | AT3G50990 | 61.667 | 120 | 46 | 0 | 1 | 120 | 71 | 190 | 1.00e-46 | 155 |
MS.gene91215.t1 | AT5G58400 | 61.983 | 121 | 45 | 1 | 1 | 120 | 60 | 180 | 1.17e-46 | 154 |
MS.gene91215.t1 | AT4G36430 | 56.349 | 126 | 54 | 1 | 1 | 126 | 60 | 184 | 2.60e-46 | 154 |
MS.gene91215.t1 | AT2G18150 | 58.120 | 117 | 49 | 0 | 1 | 117 | 66 | 182 | 3.08e-44 | 149 |
MS.gene91215.t1 | AT2G18140 | 55.556 | 126 | 55 | 1 | 1 | 126 | 65 | 189 | 3.46e-44 | 149 |
MS.gene91215.t1 | AT2G35380 | 60.684 | 117 | 46 | 0 | 1 | 117 | 60 | 176 | 6.92e-43 | 145 |
MS.gene91215.t1 | AT5G06730 | 45.963 | 161 | 75 | 1 | 1 | 161 | 63 | 211 | 9.30e-43 | 145 |
MS.gene91215.t1 | AT3G32980 | 54.198 | 131 | 57 | 1 | 1 | 131 | 61 | 188 | 5.95e-42 | 143 |
MS.gene91215.t1 | AT4G08780 | 58.120 | 117 | 49 | 0 | 1 | 117 | 54 | 170 | 2.77e-41 | 141 |
MS.gene91215.t1 | AT2G38390 | 55.372 | 121 | 51 | 1 | 1 | 121 | 61 | 178 | 3.53e-40 | 138 |
MS.gene91215.t1 | AT2G22420 | 54.783 | 115 | 52 | 0 | 3 | 117 | 55 | 169 | 4.69e-39 | 135 |
MS.gene91215.t1 | AT3G49120 | 52.672 | 131 | 59 | 1 | 1 | 131 | 62 | 189 | 6.47e-39 | 135 |
MS.gene91215.t1 | AT4G08770 | 55.556 | 117 | 52 | 0 | 1 | 117 | 54 | 170 | 7.99e-39 | 135 |
MS.gene91215.t1 | AT1G68850 | 47.154 | 123 | 65 | 0 | 2 | 124 | 61 | 183 | 9.45e-39 | 134 |
MS.gene91215.t1 | AT5G19890 | 58.120 | 117 | 45 | 2 | 1 | 117 | 60 | 172 | 2.11e-38 | 133 |
MS.gene91215.t1 | AT3G49110 | 45.000 | 160 | 77 | 2 | 1 | 160 | 63 | 211 | 3.05e-38 | 133 |
MS.gene91215.t1 | AT2G38380 | 54.701 | 117 | 53 | 0 | 1 | 117 | 61 | 177 | 3.60e-38 | 133 |
MS.gene91215.t1 | AT1G14550 | 49.265 | 136 | 66 | 3 | 1 | 135 | 56 | 189 | 7.11e-37 | 129 |
MS.gene91215.t1 | AT3G03670 | 55.556 | 108 | 47 | 1 | 3 | 110 | 55 | 161 | 1.18e-35 | 126 |
MS.gene91215.t1 | AT5G17820 | 52.212 | 113 | 48 | 3 | 3 | 115 | 56 | 162 | 7.67e-34 | 121 |
MS.gene91215.t1 | AT5G42180 | 49.194 | 124 | 60 | 3 | 3 | 126 | 55 | 175 | 8.22e-34 | 121 |
MS.gene91215.t1 | AT5G17820 | 52.212 | 113 | 48 | 3 | 3 | 115 | 109 | 215 | 2.68e-33 | 120 |
MS.gene91215.t1 | AT1G14540 | 45.926 | 135 | 71 | 2 | 1 | 135 | 51 | 183 | 5.74e-33 | 119 |
MS.gene91215.t1 | AT1G05260 | 45.833 | 120 | 63 | 2 | 1 | 120 | 56 | 173 | 6.58e-33 | 119 |
MS.gene91215.t1 | AT4G26010 | 52.212 | 113 | 51 | 2 | 3 | 115 | 54 | 163 | 7.23e-33 | 118 |
MS.gene91215.t1 | AT4G26010 | 52.212 | 113 | 51 | 2 | 3 | 115 | 82 | 191 | 9.30e-33 | 119 |
MS.gene91215.t1 | AT3G21770 | 45.000 | 120 | 64 | 2 | 1 | 120 | 59 | 176 | 2.11e-32 | 117 |
MS.gene91215.t1 | AT1G05240 | 46.218 | 119 | 62 | 2 | 1 | 119 | 56 | 172 | 3.62e-32 | 117 |
MS.gene91215.t1 | AT1G05250 | 46.218 | 119 | 62 | 2 | 1 | 119 | 56 | 172 | 3.62e-32 | 117 |
MS.gene91215.t1 | AT5G64120 | 52.459 | 122 | 52 | 4 | 5 | 126 | 69 | 184 | 5.59e-32 | 116 |
MS.gene91215.t1 | AT4G11290 | 43.333 | 120 | 68 | 0 | 1 | 120 | 55 | 174 | 6.94e-32 | 116 |
MS.gene91215.t1 | AT5G19880 | 43.902 | 164 | 76 | 4 | 1 | 161 | 55 | 205 | 1.00e-30 | 113 |
MS.gene91215.t1 | AT5G64100 | 45.139 | 144 | 61 | 4 | 5 | 148 | 71 | 196 | 1.10e-30 | 113 |
MS.gene91215.t1 | AT5G64110 | 50.833 | 120 | 52 | 4 | 5 | 124 | 68 | 180 | 1.72e-30 | 112 |
MS.gene91215.t1 | AT4G33870 | 44.348 | 115 | 63 | 1 | 5 | 119 | 102 | 215 | 3.77e-30 | 113 |
MS.gene91215.t1 | AT3G01190 | 49.573 | 117 | 55 | 3 | 1 | 117 | 56 | 168 | 4.45e-30 | 111 |
MS.gene91215.t1 | AT5G15180 | 45.299 | 117 | 62 | 2 | 1 | 117 | 62 | 176 | 4.85e-30 | 111 |
MS.gene91215.t1 | AT4G25980 | 44.444 | 126 | 65 | 4 | 1 | 126 | 101 | 221 | 8.88e-30 | 110 |
MS.gene91215.t1 | AT5G39580 | 41.026 | 156 | 75 | 4 | 5 | 160 | 59 | 197 | 1.02e-29 | 108 |
MS.gene91215.t1 | AT5G51890 | 47.009 | 117 | 60 | 2 | 3 | 119 | 58 | 172 | 1.78e-29 | 110 |
MS.gene91215.t1 | AT4G25980 | 44.444 | 126 | 65 | 4 | 1 | 126 | 56 | 176 | 5.92e-29 | 108 |
MS.gene91215.t1 | AT5G39580 | 48.739 | 119 | 55 | 4 | 5 | 123 | 59 | 171 | 4.26e-28 | 106 |
MS.gene91215.t1 | AT3G28200 | 42.742 | 124 | 70 | 1 | 2 | 124 | 52 | 175 | 7.52e-28 | 105 |
MS.gene91215.t1 | AT4G37530 | 45.763 | 118 | 61 | 2 | 6 | 120 | 62 | 179 | 8.33e-28 | 104 |
MS.gene91215.t1 | AT5G40150 | 43.548 | 124 | 69 | 1 | 2 | 124 | 63 | 186 | 8.76e-28 | 105 |
MS.gene91215.t1 | AT5G14130 | 46.552 | 116 | 60 | 2 | 6 | 120 | 67 | 181 | 1.78e-27 | 105 |
MS.gene91215.t1 | AT1G71695 | 45.378 | 119 | 63 | 2 | 1 | 117 | 74 | 192 | 2.20e-27 | 105 |
MS.gene91215.t1 | AT4G37530 | 45.763 | 118 | 61 | 2 | 6 | 120 | 62 | 179 | 2.51e-27 | 104 |
MS.gene91215.t1 | AT5G14130 | 46.552 | 116 | 60 | 2 | 6 | 120 | 108 | 222 | 2.77e-27 | 105 |
MS.gene91215.t1 | AT5G67400 | 45.763 | 118 | 61 | 2 | 6 | 120 | 62 | 179 | 4.74e-27 | 103 |
MS.gene91215.t1 | AT2G41480 | 51.887 | 106 | 46 | 3 | 5 | 110 | 63 | 163 | 4.82e-27 | 103 |
MS.gene91215.t1 | AT2G35380 | 57.471 | 87 | 37 | 0 | 31 | 117 | 2 | 88 | 5.70e-27 | 102 |
MS.gene91215.t1 | AT4G30170 | 45.161 | 124 | 60 | 4 | 6 | 126 | 62 | 180 | 1.94e-26 | 102 |
MS.gene91215.t1 | AT5G22410 | 49.107 | 112 | 49 | 4 | 1 | 110 | 58 | 163 | 2.17e-26 | 102 |
MS.gene91215.t1 | AT2G39040 | 45.082 | 122 | 64 | 3 | 1 | 120 | 76 | 196 | 2.72e-26 | 102 |
MS.gene91215.t1 | AT1G34510 | 47.368 | 114 | 57 | 2 | 3 | 116 | 54 | 164 | 2.82e-26 | 101 |
MS.gene91215.t1 | AT4G33420 | 42.017 | 119 | 67 | 2 | 1 | 119 | 67 | 183 | 3.79e-26 | 101 |
MS.gene91215.t1 | AT1G30870 | 45.299 | 117 | 59 | 2 | 1 | 117 | 81 | 192 | 4.02e-26 | 101 |
MS.gene91215.t1 | AT4G31760 | 53.261 | 92 | 39 | 1 | 5 | 96 | 63 | 150 | 4.50e-26 | 101 |
MS.gene91215.t1 | AT2G18980 | 46.774 | 124 | 58 | 4 | 6 | 126 | 60 | 178 | 4.87e-26 | 100 |
MS.gene91215.t1 | AT4G33420 | 42.017 | 119 | 67 | 2 | 1 | 119 | 114 | 230 | 7.01e-26 | 101 |
MS.gene91215.t1 | AT2G24800 | 50.000 | 94 | 43 | 1 | 5 | 98 | 65 | 154 | 1.45e-25 | 98.2 |
MS.gene91215.t1 | AT4G37520 | 39.062 | 128 | 74 | 3 | 6 | 130 | 62 | 188 | 3.61e-25 | 99.0 |
MS.gene91215.t1 | AT3G49960 | 44.068 | 118 | 63 | 2 | 6 | 120 | 62 | 179 | 5.82e-25 | 98.2 |
MS.gene91215.t1 | AT2G24800 | 50.000 | 94 | 43 | 1 | 5 | 98 | 65 | 154 | 1.50e-24 | 97.1 |
MS.gene91215.t1 | AT3G17070 | 43.333 | 120 | 57 | 3 | 3 | 116 | 70 | 184 | 2.30e-24 | 97.1 |
MS.gene91215.t1 | AT1G77100 | 45.968 | 124 | 63 | 4 | 3 | 126 | 56 | 175 | 3.35e-23 | 93.6 |
MS.gene91215.t1 | AT5G47000 | 44.954 | 109 | 57 | 2 | 2 | 108 | 64 | 171 | 3.93e-23 | 93.6 |
MS.gene91215.t1 | AT4G17690 | 42.991 | 107 | 60 | 1 | 3 | 108 | 58 | 164 | 5.72e-23 | 92.8 |
MS.gene91215.t1 | AT2G34060 | 41.803 | 122 | 68 | 2 | 6 | 124 | 77 | 198 | 6.17e-23 | 93.2 |
MS.gene91215.t1 | AT4G37520 | 38.281 | 128 | 72 | 4 | 6 | 130 | 62 | 185 | 7.96e-23 | 92.4 |
MS.gene91215.t1 | AT2G43480 | 45.045 | 111 | 55 | 3 | 1 | 111 | 67 | 171 | 1.58e-22 | 92.0 |
MS.gene91215.t1 | AT5G24070 | 44.144 | 111 | 56 | 3 | 1 | 111 | 67 | 171 | 2.50e-21 | 88.6 |
MS.gene91215.t1 | AT1G24110 | 42.991 | 107 | 60 | 1 | 6 | 111 | 57 | 163 | 6.97e-21 | 87.4 |
MS.gene91215.t1 | AT2G37130 | 41.176 | 119 | 64 | 3 | 2 | 117 | 30 | 145 | 8.96e-20 | 84.0 |
MS.gene91215.t1 | AT2G37130 | 41.176 | 119 | 64 | 3 | 2 | 117 | 61 | 176 | 1.38e-19 | 84.0 |
MS.gene91215.t1 | AT4G21960 | 39.474 | 114 | 68 | 1 | 4 | 117 | 64 | 176 | 2.24e-19 | 83.2 |
MS.gene91215.t1 | AT3G17070 | 40.909 | 110 | 53 | 4 | 13 | 116 | 18 | 121 | 1.33e-17 | 77.8 |
MS.gene91215.t1 | AT3G42570 | 35.955 | 89 | 55 | 2 | 47 | 134 | 57 | 144 | 2.85e-12 | 61.2 |
Find 34 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGAAGATGGTCCAGGAATT+TGG | 0.260659 | 2.2:-13596437 | None:intergenic |
ATCAATCTTATTGGATGATA+AGG | 0.345152 | 2.2:+13595968 | MS.gene91215:CDS |
ATGTGATGCATCAATCTTAT+TGG | 0.358275 | 2.2:+13595959 | MS.gene91215:CDS |
AGTAAAATTAGTCCTCTTAC+TGG | 0.361292 | 2.2:+13596851 | MS.gene91215:CDS |
CTTCCTAGTGGTACTGTCCA+TGG | 0.366236 | 2.2:-13596375 | None:intergenic |
TAGTCCTCTTACTGGGACTA+AGG | 0.384532 | 2.2:+13596859 | MS.gene91215:CDS |
GCAGCAAACAGCCAAATTCC+TGG | 0.386973 | 2.2:+13596426 | MS.gene91215:CDS |
GTGAGATCAGAAAGAATTGC+AGG | 0.399204 | 2.2:+13596882 | MS.gene91215:CDS |
TTCCTAGTGGTACTGTCCAT+GGG | 0.402046 | 2.2:-13596374 | None:intergenic |
CCCCTAGCTGAATCTTTGTT+AGG | 0.406359 | 2.2:-13596020 | None:intergenic |
GATGATAAGGGAACATTTGT+CGG | 0.429735 | 2.2:+13595981 | MS.gene91215:CDS |
TCAATCTTATTGGATGATAA+GGG | 0.439805 | 2.2:+13595969 | MS.gene91215:CDS |
TTACATTTACAAAGCAATCA+TGG | 0.442899 | 2.2:-13594606 | None:intergenic |
TAGAGACTTTGCTGCTGCTA+TGG | 0.447233 | 2.2:+13596820 | MS.gene91215:CDS |
TCACCCTTAGTCCCAGTAAG+AGG | 0.474368 | 2.2:-13596863 | None:intergenic |
GTTAGGAAGTATAGTAGAGA+TGG | 0.495131 | 2.2:+13596785 | MS.gene91215:intron |
CTTGCATCTCTTCTTCCTAG+TGG | 0.506526 | 2.2:-13596387 | None:intergenic |
CTAGCACTTGCAACTAGAGA+TGG | 0.521717 | 2.2:+13596116 | MS.gene91215:CDS |
AATTAATTTATATAGCTTGG+AGG | 0.537880 | 2.2:+13596348 | MS.gene91215:intron |
GATAGGTCAGAAGATGGTCC+AGG | 0.542401 | 2.2:-13596444 | None:intergenic |
AACTAGAGATGGAATAGCAC+TGG | 0.557344 | 2.2:+13596127 | MS.gene91215:CDS |
GACCTAACAAAGATTCAGCT+AGG | 0.557775 | 2.2:+13596018 | MS.gene91215:CDS |
ACCTAACAAAGATTCAGCTA+GGG | 0.564107 | 2.2:+13596019 | MS.gene91215:CDS |
AGTCCTCTTACTGGGACTAA+GGG | 0.567071 | 2.2:+13596860 | MS.gene91215:CDS |
TTTGCAAGAAGCTTCAACGT+TGG | 0.574605 | 2.2:-13596069 | None:intergenic |
ACATTCTAGTGAGTGTGGAT+AGG | 0.580024 | 2.2:-13596461 | None:intergenic |
TCCTAGTGGTACTGTCCATG+GGG | 0.581571 | 2.2:-13596373 | None:intergenic |
GTAAAATTAGTCCTCTTACT+GGG | 0.603083 | 2.2:+13596852 | MS.gene91215:CDS |
TTGAAACATTCTAGTGAGTG+TGG | 0.606627 | 2.2:-13596466 | None:intergenic |
AGTGTGGATAGGTCAGAAGA+TGG | 0.621043 | 2.2:-13596450 | None:intergenic |
CCTAACAAAGATTCAGCTAG+GGG | 0.634590 | 2.2:+13596020 | MS.gene91215:CDS |
AATATCTGCACAAGAGACAG+TGG | 0.650907 | 2.2:-13596093 | None:intergenic |
TGAGATCAGAAAGAATTGCA+GGG | 0.655189 | 2.2:+13596883 | MS.gene91215:CDS |
CCTAGTGGTACTGTCCATGG+GGG | 0.718862 | 2.2:-13596372 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATATATAAATATATAAACT+AGG | + | chr2.2:13596190-13596209 | MS.gene91215:intron | 10.0% |
!! | TATATAAATTAATTGAAACA+TGG | - | chr2.2:13596342-13596361 | None:intergenic | 10.0% |
!! | TATTGAAAAATTAAAATGAT+CGG | - | chr2.2:13595656-13595675 | None:intergenic | 10.0% |
!! | ATTGAAAAATTAAAATGATC+GGG | - | chr2.2:13595655-13595674 | None:intergenic | 15.0% |
!! | ATTTGACAACAATTATTATA+AGG | + | chr2.2:13596689-13596708 | MS.gene91215:intron | 15.0% |
!! | CTCATTAATTTATATAACTT+AGG | + | chr2.2:13594710-13594729 | MS.gene91215:intron | 15.0% |
!! | TTCAATTAATTTATATAGCT+TGG | + | chr2.2:13596345-13596364 | MS.gene91215:intron | 15.0% |
!!! | AAACAACATCATTTTTTATT+GGG | - | chr2.2:13595300-13595319 | None:intergenic | 15.0% |
!!! | CTTAATTAAGCTTTTTTTAT+AGG | - | chr2.2:13595037-13595056 | None:intergenic | 15.0% |
!!! | GGTTAATATTTTTTTACAAA+GGG | - | chr2.2:13596262-13596281 | None:intergenic | 15.0% |
!!! | GTTAATATTTTTTTACAAAG+GGG | - | chr2.2:13596261-13596280 | None:intergenic | 15.0% |
!!! | GTTTTATTTCTTTGTTTATT+TGG | + | chr2.2:13595931-13595950 | MS.gene91215:intron | 15.0% |
!! | AATTAATTTATATAGCTTGG+AGG | + | chr2.2:13596348-13596367 | MS.gene91215:intron | 20.0% |
!! | ACAAAACTGTGAATATTTAT+AGG | - | chr2.2:13595069-13595088 | None:intergenic | 20.0% |
!! | ATGTTTACCAATGTAATATT+AGG | - | chr2.2:13596284-13596303 | None:intergenic | 20.0% |
!! | ATTAATTGAAACATGGTTAT+AGG | - | chr2.2:13596335-13596354 | None:intergenic | 20.0% |
!! | CAAAACTGTGAATATTTATA+GGG | - | chr2.2:13595068-13595087 | None:intergenic | 20.0% |
!! | GAAGAGTTATATATGTTTAA+AGG | + | chr2.2:13594818-13594837 | MS.gene91215:intron | 20.0% |
!! | TAAGGATTAATTATTCAGAT+TGG | + | chr2.2:13594923-13594942 | MS.gene91215:intron | 20.0% |
!! | TAATTGTTGTCAAATTTAGT+TGG | - | chr2.2:13596684-13596703 | None:intergenic | 20.0% |
!! | TATTAACCCTAATATTACAT+TGG | + | chr2.2:13596274-13596293 | MS.gene91215:intron | 20.0% |
!! | TCAACAACAAAAAATAATCA+CGG | + | chr2.2:13595838-13595857 | MS.gene91215:intron | 20.0% |
!! | TGTTTACCAATGTAATATTA+GGG | - | chr2.2:13596283-13596302 | None:intergenic | 20.0% |
!! | TTTAACTCCAGTAATATTAA+CGG | + | chr2.2:13596224-13596243 | MS.gene91215:intron | 20.0% |
!!! | AAAGTGTGATTTTATTTTGT+AGG | - | chr2.2:13595100-13595119 | None:intergenic | 20.0% |
!!! | AAGTGTGATTTTATTTTGTA+GGG | - | chr2.2:13595099-13595118 | None:intergenic | 20.0% |
!!! | ACATTTTCCTTAAACATTTT+AGG | + | chr2.2:13595132-13595151 | MS.gene91215:intron | 20.0% |
!!! | ATTTCTTTGTTTATTTGGTA+GGG | + | chr2.2:13595936-13595955 | MS.gene91215:intron | 20.0% |
!!! | CAAACAACATCATTTTTTAT+TGG | - | chr2.2:13595301-13595320 | None:intergenic | 20.0% |
!!! | CATTTTCCTTAAACATTTTA+GGG | + | chr2.2:13595133-13595152 | MS.gene91215:intron | 20.0% |
!!! | GGGTTAATATTTTTTTACAA+AGG | - | chr2.2:13596263-13596282 | None:intergenic | 20.0% |
!!! | TATTTCTTTGTTTATTTGGT+AGG | + | chr2.2:13595935-13595954 | MS.gene91215:intron | 20.0% |
! | AAAATTTCCATCAACATTCT+TGG | - | chr2.2:13595160-13595179 | None:intergenic | 25.0% |
! | AATCACAAAAAAAAATGCAC+AGG | - | chr2.2:13595456-13595475 | None:intergenic | 25.0% |
! | ATCAATCTTATTGGATGATA+AGG | + | chr2.2:13595968-13595987 | MS.gene91215:CDS | 25.0% |
! | ATCACAAAAAAAAATGCACA+GGG | - | chr2.2:13595455-13595474 | None:intergenic | 25.0% |
! | ATCGTGTTAAAATATTGTCT+TGG | + | chr2.2:13594870-13594889 | MS.gene91215:intron | 25.0% |
! | ATTTATTACTGTACTCACTA+TGG | - | chr2.2:13595804-13595823 | None:intergenic | 25.0% |
! | CAACAACAAAAAATAATCAC+GGG | + | chr2.2:13595839-13595858 | MS.gene91215:intron | 25.0% |
! | GTTATATATGTTTAAAGGTG+TGG | + | chr2.2:13594823-13594842 | MS.gene91215:intron | 25.0% |
! | TCAATCTTATTGGATGATAA+GGG | + | chr2.2:13595969-13595988 | MS.gene91215:CDS | 25.0% |
! | TCGTGTTAAAATATTGTCTT+GGG | + | chr2.2:13594871-13594890 | MS.gene91215:intron | 25.0% |
! | TTACATTTACAAAGCAATCA+TGG | - | chr2.2:13594609-13594628 | None:intergenic | 25.0% |
!! | GCTGATGGAAAAATTTTATA+AGG | + | chr2.2:13595197-13595216 | MS.gene91215:intron | 25.0% |
!! | TTCTTTTTCTTAAGTTAGCA+AGG | - | chr2.2:13596608-13596627 | None:intergenic | 25.0% |
!!! | AAAGTGTGACTTTATTTTGT+AGG | + | chr2.2:13595225-13595244 | MS.gene91215:intron | 25.0% |
!!! | AAGTGTGACTTTATTTTGTA+GGG | + | chr2.2:13595226-13595245 | MS.gene91215:intron | 25.0% |
!!! | TGTTGTTTTATATGTTGTCT+TGG | + | chr2.2:13595492-13595511 | MS.gene91215:intron | 25.0% |
!!! | TTCAGTTACTATTTTAGTCA+CGG | + | chr2.2:13595868-13595887 | MS.gene91215:intron | 25.0% |
AAAGACCTTTATTAGCAATG+AGG | - | chr2.2:13596716-13596735 | None:intergenic | 30.0% | |
AGGATACACATATTGTTTAC+AGG | - | chr2.2:13596315-13596334 | None:intergenic | 30.0% | |
AGTAAAATTAGTCCTCTTAC+TGG | + | chr2.2:13596851-13596870 | MS.gene91215:CDS | 30.0% | |
ATGTGATGCATCAATCTTAT+TGG | + | chr2.2:13595959-13595978 | MS.gene91215:CDS | 30.0% | |
CGTGTTAAAATATTGTCTTG+GGG | + | chr2.2:13594872-13594891 | MS.gene91215:intron | 30.0% | |
GGATACACATATTGTTTACA+GGG | - | chr2.2:13596314-13596333 | None:intergenic | 30.0% | |
GTAAAATTAGTCCTCTTACT+GGG | + | chr2.2:13596852-13596871 | MS.gene91215:CDS | 30.0% | |
GTTCATTGTTCATGTCTTAT+AGG | - | chr2.2:13596171-13596190 | None:intergenic | 30.0% | |
TCACAAAAAAAAATGCACAG+GGG | - | chr2.2:13595454-13595473 | None:intergenic | 30.0% | |
TGTTTAAGGAAAATGTCACA+TGG | - | chr2.2:13595128-13595147 | None:intergenic | 30.0% | |
TTGATTTCTCATCTTCATTG+TGG | + | chr2.2:13595526-13595545 | MS.gene91215:intron | 30.0% | |
! | AATTCGCTTTGTTGTATGAT+GGG | + | chr2.2:13594974-13594993 | MS.gene91215:intron | 30.0% |
! | ATATATGTTTAAAGGTGTGG+TGG | + | chr2.2:13594826-13594845 | MS.gene91215:intron | 30.0% |
! | TAATTCGCTTTGTTGTATGA+TGG | + | chr2.2:13594973-13594992 | MS.gene91215:intron | 30.0% |
! | TCTGATCAAGTTCTTTTCAA+TGG | + | chr2.2:13596741-13596760 | MS.gene91215:intron | 30.0% |
!! | GTTGATGGAAATTTTTGACA+GGG | + | chr2.2:13595165-13595184 | MS.gene91215:intron | 30.0% |
!! | TGTTGATGGAAATTTTTGAC+AGG | + | chr2.2:13595164-13595183 | MS.gene91215:intron | 30.0% |
!!! | TCAGTTACTATTTTAGTCAC+GGG | + | chr2.2:13595869-13595888 | MS.gene91215:intron | 30.0% |
AAAAGAAATTGTCCTACCTC+TGG | + | chr2.2:13596621-13596640 | MS.gene91215:intron | 35.0% | |
AAGGACCTCATTGCTAATAA+AGG | + | chr2.2:13596708-13596727 | MS.gene91215:intron | 35.0% | |
ACCTAACAAAGATTCAGCTA+GGG | + | chr2.2:13596019-13596038 | MS.gene91215:CDS | 35.0% | |
AGCAAGGTTTCTGTTAATGT+TGG | - | chr2.2:13596592-13596611 | None:intergenic | 35.0% | |
CTTGGTCCCTAAAATGTTTA+AGG | - | chr2.2:13595142-13595161 | None:intergenic | 35.0% | |
GATGATAAGGGAACATTTGT+CGG | + | chr2.2:13595981-13596000 | MS.gene91215:CDS | 35.0% | |
GGTTCTCAATTTCTTTGGTT+AGG | + | chr2.2:13596768-13596787 | MS.gene91215:intron | 35.0% | |
GTAGCTTAGAGAGAATTGTA+AGG | + | chr2.2:13594905-13594924 | MS.gene91215:intron | 35.0% | |
GTTAAAATATTGTCTTGGGG+TGG | + | chr2.2:13594875-13594894 | MS.gene91215:intron | 35.0% | |
TGAGATCAGAAAGAATTGCA+GGG | + | chr2.2:13596883-13596902 | MS.gene91215:CDS | 35.0% | |
TTGAAACATTCTAGTGAGTG+TGG | - | chr2.2:13596469-13596488 | None:intergenic | 35.0% | |
! | CAAGTTCTTTTCAATGGTGT+TGG | + | chr2.2:13596747-13596766 | MS.gene91215:intron | 35.0% |
! | GTTAGGAAGTATAGTAGAGA+TGG | + | chr2.2:13596785-13596804 | MS.gene91215:intron | 35.0% |
! | TCAGATTGGTGTTCATGTTT+GGG | + | chr2.2:13594937-13594956 | MS.gene91215:intron | 35.0% |
! | TTCAGATTGGTGTTCATGTT+TGG | + | chr2.2:13594936-13594955 | MS.gene91215:intron | 35.0% |
!! | AAAGGTGTGGTGGATAAAAT+TGG | + | chr2.2:13594836-13594855 | MS.gene91215:intron | 35.0% |
!! | AGAATCAAAGGGTGCTAAAT+TGG | - | chr2.2:13596655-13596674 | None:intergenic | 35.0% |
!! | GTGTTGGTTCTCAATTTCTT+TGG | + | chr2.2:13596763-13596782 | MS.gene91215:intron | 35.0% |
!!! | AGCTTCAACGTTGGTTTTAA+TGG | - | chr2.2:13596063-13596082 | None:intergenic | 35.0% |
AACTAGAGATGGAATAGCAC+TGG | + | chr2.2:13596127-13596146 | MS.gene91215:CDS | 40.0% | |
AATATCTGCACAAGAGACAG+TGG | - | chr2.2:13596096-13596115 | None:intergenic | 40.0% | |
AATGACCTTACAGTCCTTTC+TGG | + | chr2.2:13596507-13596526 | MS.gene91215:intron | 40.0% | |
ACAGGGACTAAAAATGCTGA+TGG | + | chr2.2:13595182-13595201 | MS.gene91215:intron | 40.0% | |
ACATTCTAGTGAGTGTGGAT+AGG | - | chr2.2:13596464-13596483 | None:intergenic | 40.0% | |
AGTTGGAGTGACAGAATCAA+AGG | - | chr2.2:13596667-13596686 | None:intergenic | 40.0% | |
CCAGAAGCCGTTAATATTAC+TGG | - | chr2.2:13596234-13596253 | None:intergenic | 40.0% | |
CCAGTAATATTAACGGCTTC+TGG | + | chr2.2:13596231-13596250 | MS.gene91215:intron | 40.0% | |
CCTAACAAAGATTCAGCTAG+GGG | + | chr2.2:13596020-13596039 | MS.gene91215:CDS | 40.0% | |
GACCTAACAAAGATTCAGCT+AGG | + | chr2.2:13596018-13596037 | MS.gene91215:CDS | 40.0% | |
GGTGGATAAAATTGGTGTAG+TGG | + | chr2.2:13594844-13594863 | MS.gene91215:intron | 40.0% | |
GTGAGATCAGAAAGAATTGC+AGG | + | chr2.2:13596882-13596901 | MS.gene91215:CDS | 40.0% | |
GTTGGAGTGACAGAATCAAA+GGG | - | chr2.2:13596666-13596685 | None:intergenic | 40.0% | |
TAGCGTCAATGTTACTGATC+AGG | + | chr2.2:13595617-13595636 | MS.gene91215:intron | 40.0% | |
TTAGGGACCAAGAATGTTGA+TGG | + | chr2.2:13595150-13595169 | MS.gene91215:intron | 40.0% | |
TTTGCAAGAAGCTTCAACGT+TGG | - | chr2.2:13596072-13596091 | None:intergenic | 40.0% | |
TTTGTCGGTGAGAAAAATGC+TGG | + | chr2.2:13595996-13596015 | MS.gene91215:CDS | 40.0% | |
! | TGTGATTTGTCGTCTGCTTT+CGG | + | chr2.2:13595469-13595488 | MS.gene91215:intron | 40.0% |
AGAAATTGTCCTACCTCTGG+TGG | + | chr2.2:13596624-13596643 | MS.gene91215:intron | 45.0% | |
AGTCCTCTTACTGGGACTAA+GGG | + | chr2.2:13596860-13596879 | MS.gene91215:CDS | 45.0% | |
AGTGTGGATAGGTCAGAAGA+TGG | - | chr2.2:13596453-13596472 | None:intergenic | 45.0% | |
CAGAAGATGGTCCAGGAATT+TGG | - | chr2.2:13596440-13596459 | None:intergenic | 45.0% | |
CCCCTAGCTGAATCTTTGTT+AGG | - | chr2.2:13596023-13596042 | None:intergenic | 45.0% | |
CGTCAATGTTACTGATCAGG+AGG | + | chr2.2:13595620-13595639 | MS.gene91215:intron | 45.0% | |
CTAGCACTTGCAACTAGAGA+TGG | + | chr2.2:13596116-13596135 | MS.gene91215:CDS | 45.0% | |
CTTGCATCTCTTCTTCCTAG+TGG | - | chr2.2:13596390-13596409 | None:intergenic | 45.0% | |
TACTGTACTCACTATGGAGC+AGG | - | chr2.2:13595798-13595817 | None:intergenic | 45.0% | |
TAGAGACTTTGCTGCTGCTA+TGG | + | chr2.2:13596820-13596839 | MS.gene91215:CDS | 45.0% | |
TAGTCCTCTTACTGGGACTA+AGG | + | chr2.2:13596859-13596878 | MS.gene91215:CDS | 45.0% | |
TTCCTAGTGGTACTGTCCAT+GGG | - | chr2.2:13596377-13596396 | None:intergenic | 45.0% | |
TTGACACTCAGTTTGCCCTA+TGG | - | chr2.2:13596541-13596560 | None:intergenic | 45.0% | |
! | TTTCTGGTGCACACACCATA+GGG | + | chr2.2:13596523-13596542 | MS.gene91215:intron | 45.0% |
!! | TAAATTGGTGTCACCACCAG+AGG | - | chr2.2:13596640-13596659 | None:intergenic | 45.0% |
!! | ATATATAAATATATAAACTA+GGG | + | chr2.2:13596191-13596210 | MS.gene91215:intron | 5.0% |
!!! | ACAAAATTTTAAATATTTAT+AGG | + | chr2.2:13595256-13595275 | MS.gene91215:intron | 5.0% |
!!! | CAAAATTTTAAATATTTATA+GGG | + | chr2.2:13595257-13595276 | MS.gene91215:intron | 5.0% |
CTATGGTGTGTGCACCAGAA+AGG | - | chr2.2:13596524-13596543 | None:intergenic | 50.0% | |
CTTCCTAGTGGTACTGTCCA+TGG | - | chr2.2:13596378-13596397 | None:intergenic | 50.0% | |
GATAGGTCAGAAGATGGTCC+AGG | - | chr2.2:13596447-13596466 | None:intergenic | 50.0% | |
GCAGCAAACAGCCAAATTCC+TGG | + | chr2.2:13596426-13596445 | MS.gene91215:CDS | 50.0% | |
GTGCACCAGAAAGGACTGTA+AGG | - | chr2.2:13596515-13596534 | None:intergenic | 50.0% | |
TCACCCTTAGTCCCAGTAAG+AGG | - | chr2.2:13596866-13596885 | None:intergenic | 50.0% | |
TCCTAGTGGTACTGTCCATG+GGG | - | chr2.2:13596376-13596395 | None:intergenic | 50.0% | |
! | CTTTCTGGTGCACACACCAT+AGG | + | chr2.2:13596522-13596541 | MS.gene91215:intron | 50.0% |
CCTAGTGGTACTGTCCATGG+GGG | - | chr2.2:13596375-13596394 | None:intergenic | 55.0% | |
TATAGCTTGGAGGACCCCCA+TGG | + | chr2.2:13596358-13596377 | MS.gene91215:intron | 55.0% | |
!! | TTGGTGTCACCACCAGAGGT+AGG | - | chr2.2:13596636-13596655 | None:intergenic | 55.0% |
CCCCCATGGACAGTACCACT+AGG | + | chr2.2:13596372-13596391 | MS.gene91215:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 13594577 | 13596916 | 13594577 | ID=MS.gene91215 |
chr2.2 | mRNA | 13594577 | 13596916 | 13594577 | ID=MS.gene91215.t1;Parent=MS.gene91215 |
chr2.2 | exon | 13594577 | 13594624 | 13594577 | ID=MS.gene91215.t1.exon1;Parent=MS.gene91215.t1 |
chr2.2 | CDS | 13594577 | 13594624 | 13594577 | ID=cds.MS.gene91215.t1;Parent=MS.gene91215.t1 |
chr2.2 | exon | 13595957 | 13596148 | 13595957 | ID=MS.gene91215.t1.exon2;Parent=MS.gene91215.t1 |
chr2.2 | CDS | 13595957 | 13596148 | 13595957 | ID=cds.MS.gene91215.t1;Parent=MS.gene91215.t1 |
chr2.2 | exon | 13596363 | 13596481 | 13596363 | ID=MS.gene91215.t1.exon3;Parent=MS.gene91215.t1 |
chr2.2 | CDS | 13596363 | 13596481 | 13596363 | ID=cds.MS.gene91215.t1;Parent=MS.gene91215.t1 |
chr2.2 | exon | 13596790 | 13596916 | 13596790 | ID=MS.gene91215.t1.exon4;Parent=MS.gene91215.t1 |
chr2.2 | CDS | 13596790 | 13596916 | 13596790 | ID=cds.MS.gene91215.t1;Parent=MS.gene91215.t1 |
Gene Sequence |
Protein sequence |