Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98990.t1 | XP_013442577.1 | 97.7 | 344 | 8 | 0 | 1 | 344 | 1 | 344 | 1.40E-191 | 678.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98990.t1 | Q55DB6 | 29.5 | 387 | 219 | 6 | 1 | 342 | 1 | 378 | 1.0e-41 | 172.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98990.t1 | A0A072TGU9 | 97.7 | 344 | 8 | 0 | 1 | 344 | 1 | 344 | 1.0e-191 | 678.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene98990 | 0.862276 | 5.68E-64 | -1.69E-46 |
| MS.gene049159 | MS.gene98990 | 0.839555 | 1.48E-57 | -1.69E-46 |
| MS.gene04918 | MS.gene98990 | 0.800622 | 1.32E-48 | -1.69E-46 |
| MS.gene049350 | MS.gene98990 | 0.802751 | 4.84E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene98990 | 0.816038 | 6.79E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene98990 | 0.803238 | 3.84E-49 | -1.69E-46 |
| MS.gene049711 | MS.gene98990 | 0.813103 | 3.03E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene98990 | 0.814019 | 1.91E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene98990 | 0.824923 | 6.20E-54 | -1.69E-46 |
| MS.gene049887 | MS.gene98990 | 0.805303 | 1.42E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene98990 | 0.81969 | 1.02E-52 | -1.69E-46 |
| MS.gene050384 | MS.gene98990 | 0.825516 | 4.49E-54 | -1.69E-46 |
| MS.gene050386 | MS.gene98990 | 0.818058 | 2.39E-52 | -1.69E-46 |
| MS.gene050551 | MS.gene98990 | 0.821668 | 3.57E-53 | -1.69E-46 |
| MS.gene050646 | MS.gene98990 | 0.801132 | 1.04E-48 | -1.69E-46 |
| MS.gene050654 | MS.gene98990 | 0.82797 | 1.17E-54 | -1.69E-46 |
| MS.gene050689 | MS.gene98990 | 0.83536 | 1.76E-56 | -1.69E-46 |
| MS.gene050759 | MS.gene98990 | 0.823759 | 1.17E-53 | -1.69E-46 |
| MS.gene050826 | MS.gene98990 | 0.804019 | 2.64E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene98990 | 0.813725 | 2.21E-51 | -1.69E-46 |
| MS.gene050901 | MS.gene98990 | 0.828817 | 7.28E-55 | -1.69E-46 |
| MS.gene050941 | MS.gene98990 | 0.8187 | 1.71E-52 | -1.69E-46 |
| MS.gene050962 | MS.gene98990 | 0.818946 | 1.50E-52 | -1.69E-46 |
| MS.gene051003 | MS.gene98990 | 0.812838 | 3.47E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene98990 | 0.819896 | 9.13E-53 | -1.69E-46 |
| MS.gene051198 | MS.gene98990 | 0.808439 | 3.10E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene98990 | 0.809507 | 1.83E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene98990 | 0.804625 | 1.97E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene98990 | 0.821759 | 3.40E-53 | -1.69E-46 |
| MS.gene051490 | MS.gene98990 | 0.801925 | 7.15E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene98990 | 0.801414 | 9.11E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene98990 | 0.828568 | 8.36E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene98990 | 0.830797 | 2.40E-55 | -1.69E-46 |
| MS.gene051744 | MS.gene98990 | 0.834327 | 3.20E-56 | -1.69E-46 |
| MS.gene051800 | MS.gene98990 | 0.805229 | 1.48E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene98990 | 0.810281 | 1.25E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene98990 | 0.853807 | 1.87E-61 | -1.69E-46 |
| MS.gene052335 | MS.gene98990 | 0.804157 | 2.47E-49 | -1.69E-46 |
| MS.gene052342 | MS.gene98990 | 0.801894 | 7.26E-49 | -1.69E-46 |
| MS.gene052459 | MS.gene98990 | 0.840188 | 1.01E-57 | -1.69E-46 |
| MS.gene052463 | MS.gene98990 | 0.869216 | 3.66E-66 | -1.69E-46 |
| MS.gene052516 | MS.gene98990 | 0.859781 | 3.26E-63 | -1.69E-46 |
| MS.gene052609 | MS.gene98990 | 0.845486 | 3.94E-59 | -1.69E-46 |
| MS.gene052776 | MS.gene98990 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene98990 | 0.812335 | 4.47E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene98990 | 0.801248 | 9.85E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene98990 | 0.818726 | 1.69E-52 | -1.69E-46 |
| MS.gene053058 | MS.gene98990 | 0.800438 | 1.44E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene98990 | 0.856086 | 4.08E-62 | -1.69E-46 |
| MS.gene053143 | MS.gene98990 | 0.827536 | 1.48E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene98990 | 0.846014 | 2.83E-59 | -1.69E-46 |
| MS.gene053164 | MS.gene98990 | 0.802966 | 4.37E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene98990 | 0.82858 | 8.31E-55 | -1.69E-46 |
| MS.gene053581 | MS.gene98990 | 0.82394 | 1.06E-53 | -1.69E-46 |
| MS.gene05423 | MS.gene98990 | 0.82572 | 4.02E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene98990 | 0.836844 | 7.38E-57 | -1.69E-46 |
| MS.gene05458 | MS.gene98990 | 0.856547 | 2.99E-62 | -1.69E-46 |
| MS.gene054651 | MS.gene98990 | 0.832185 | 1.09E-55 | -1.69E-46 |
| MS.gene054824 | MS.gene98990 | 0.809736 | 1.63E-50 | -1.69E-46 |
| MS.gene055144 | MS.gene98990 | 0.815077 | 1.11E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene98990 | 0.831657 | 1.47E-55 | -1.69E-46 |
| MS.gene055311 | MS.gene98990 | 0.814051 | 1.88E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene98990 | 0.835069 | 2.08E-56 | -1.69E-46 |
| MS.gene055465 | MS.gene98990 | 0.818439 | 1.96E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene98990 | 0.811755 | 5.97E-51 | -1.69E-46 |
| MS.gene055468 | MS.gene98990 | 0.808531 | 2.96E-50 | -1.69E-46 |
| MS.gene055469 | MS.gene98990 | 0.831313 | 1.79E-55 | -1.69E-46 |
| MS.gene055513 | MS.gene98990 | 0.888849 | 4.10E-73 | -1.69E-46 |
| MS.gene055537 | MS.gene98990 | 0.801704 | 7.94E-49 | -1.69E-46 |
| MS.gene055580 | MS.gene98990 | -0.800184 | 1.62E-48 | -1.69E-46 |
| MS.gene055864 | MS.gene98990 | 0.825536 | 4.44E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene98990 | 0.833333 | 5.66E-56 | -1.69E-46 |
| MS.gene055979 | MS.gene98990 | 0.840181 | 1.01E-57 | -1.69E-46 |
| MS.gene056045 | MS.gene98990 | 0.822473 | 2.32E-53 | -1.69E-46 |
| MS.gene056181 | MS.gene98990 | 0.847269 | 1.29E-59 | -1.69E-46 |
| MS.gene056308 | MS.gene98990 | 0.864131 | 1.52E-64 | -1.69E-46 |
| MS.gene056390 | MS.gene98990 | 0.805714 | 1.17E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene98990 | 0.8479 | 8.63E-60 | -1.69E-46 |
| MS.gene056699 | MS.gene98990 | 0.842921 | 1.92E-58 | -1.69E-46 |
| MS.gene056831 | MS.gene98990 | 0.808302 | 3.31E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene98990 | 0.808319 | 3.28E-50 | -1.69E-46 |
| MS.gene057034 | MS.gene98990 | 0.850486 | 1.65E-60 | -1.69E-46 |
| MS.gene057102 | MS.gene98990 | 0.800023 | 1.75E-48 | -1.69E-46 |
| MS.gene057294 | MS.gene98990 | 0.808381 | 3.18E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene98990 | 0.809876 | 1.52E-50 | -1.69E-46 |
| MS.gene057446 | MS.gene98990 | 0.81541 | 9.38E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene98990 | 0.844523 | 7.17E-59 | -1.69E-46 |
| MS.gene058010 | MS.gene98990 | 0.837479 | 5.07E-57 | -1.69E-46 |
| MS.gene058289 | MS.gene98990 | 0.805086 | 1.58E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene98990 | 0.800275 | 1.56E-48 | -1.69E-46 |
| MS.gene058339 | MS.gene98990 | 0.816543 | 5.24E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene98990 | 0.802273 | 6.07E-49 | -1.69E-46 |
| MS.gene058647 | MS.gene98990 | 0.816834 | 4.51E-52 | -1.69E-46 |
| MS.gene058649 | MS.gene98990 | 0.803983 | 2.69E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene98990 | 0.828759 | 7.52E-55 | -1.69E-46 |
| MS.gene059283 | MS.gene98990 | 0.815087 | 1.11E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene98990 | 0.818886 | 1.55E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene98990 | 0.814746 | 1.32E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene98990 | 0.803889 | 2.81E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene98990 | 0.802507 | 5.43E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene98990 | 0.813642 | 2.31E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene98990 | 0.830335 | 3.11E-55 | -1.69E-46 |
| MS.gene06052 | MS.gene98990 | 0.807316 | 5.37E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene98990 | 0.800215 | 1.60E-48 | -1.69E-46 |
| MS.gene060637 | MS.gene98990 | 0.805948 | 1.04E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene98990 | 0.815677 | 8.18E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene98990 | 0.846725 | 1.81E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene98990 | 0.803338 | 3.66E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene98990 | 0.807464 | 4.99E-50 | -1.69E-46 |
| MS.gene061006 | MS.gene98990 | 0.839801 | 1.28E-57 | -1.69E-46 |
| MS.gene061100 | MS.gene98990 | 0.870142 | 1.82E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98990.t1 | MTR_0136s0060 | 97.674 | 344 | 8 | 0 | 1 | 344 | 1 | 344 | 0.0 | 676 |
| MS.gene98990.t1 | MTR_7g093500 | 69.859 | 355 | 95 | 3 | 1 | 344 | 1 | 354 | 4.89e-176 | 492 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98990.t1 | AT3G12050 | 68.144 | 361 | 97 | 3 | 1 | 344 | 1 | 360 | 2.05e-175 | 491 |
| MS.gene98990.t1 | AT3G12050 | 61.219 | 361 | 83 | 4 | 1 | 344 | 1 | 321 | 3.95e-148 | 420 |
Find 94 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGGGAAGGGGTTGATTT+TGG | 0.202681 | 1.2:-41532421 | MS.gene98990:CDS |
| CTGATGAAGATCCTGAAATT+AGG | 0.214851 | 1.2:-41532500 | MS.gene98990:CDS |
| ATTCGATCTGTGTTTGGTTT+TGG | 0.228632 | 1.2:-41530574 | MS.gene98990:CDS |
| TTTGGAGAAGGTTAGGGTTT+GGG | 0.255145 | 1.2:-41532403 | MS.gene98990:CDS |
| GTCTGTTACAGGGATGAATT+TGG | 0.278967 | 1.2:-41532094 | MS.gene98990:CDS |
| TTAACACTAACCCTAATTTC+AGG | 0.309839 | 1.2:+41532489 | None:intergenic |
| TTCCCCTTCTCCTTCGCAAC+CGG | 0.351213 | 1.2:+41532273 | None:intergenic |
| CAGAGGATTCGATCTGTGTT+TGG | 0.353659 | 1.2:-41530580 | MS.gene98990:CDS |
| ATTGTTCAGAGATGGAGATT+TGG | 0.368974 | 1.2:-41532051 | MS.gene98990:CDS |
| TTGTGGACGTTTGTTCCGTC+TGG | 0.386272 | 1.2:+41532813 | None:intergenic |
| TTTAGACCATTCTAAACAAT+TGG | 0.390977 | 1.2:+41532773 | None:intergenic |
| GTGTTTGAGGAGCCTGAATC+TGG | 0.392808 | 1.2:-41530791 | MS.gene98990:CDS |
| CCATTCTAAACAATTGGTTT+CGG | 0.396900 | 1.2:+41532779 | None:intergenic |
| CCCAATTTCATGGCAAAATA+CGG | 0.402373 | 1.2:-41532870 | None:intergenic |
| ATGAATTTGGAGTTGGAAGA+AGG | 0.403778 | 1.2:-41532081 | MS.gene98990:CDS |
| TGAATGAGAAGTTTAATTGT+AGG | 0.410407 | 1.2:-41532227 | MS.gene98990:CDS |
| GCGAAGGAGAAGGGGAAGAA+AGG | 0.412874 | 1.2:-41532267 | MS.gene98990:CDS |
| TAATGATGGATGAGAATAGA+TGG | 0.417162 | 1.2:-41532185 | MS.gene98990:CDS |
| GCATTCTCATCAGAGATATA+CGG | 0.417274 | 1.2:+41532522 | None:intergenic |
| GGAAGTTGATTGTTCAGAGA+TGG | 0.424875 | 1.2:-41532059 | MS.gene98990:CDS |
| AAAGGAGGAGGAAGTTGTTC+CGG | 0.425406 | 1.2:-41532292 | MS.gene98990:CDS |
| CTCTCAAGATCATCCTTAAC+CGG | 0.431014 | 1.2:+41532357 | None:intergenic |
| CTAGGATTAGTAAAGAGGTT+GGG | 0.438628 | 1.2:-41532140 | MS.gene98990:CDS |
| AGAGATGGAGATTTGGAAGT+TGG | 0.439510 | 1.2:-41532044 | MS.gene98990:CDS |
| TGATGAAGATCCTGAAATTA+GGG | 0.441615 | 1.2:-41532499 | MS.gene98990:CDS |
| ACGGAACAAACGTCCACAAC+TGG | 0.451199 | 1.2:-41532809 | MS.gene98990:CDS |
| CCGAAACCAATTGTTTAGAA+TGG | 0.453161 | 1.2:-41532779 | MS.gene98990:CDS |
| GGTTGCGGTGGAGAAGAAAA+AGG | 0.455227 | 1.2:-41532310 | MS.gene98990:CDS |
| AAATCAGCGTTAACCTTACC+TGG | 0.457043 | 1.2:-41532608 | MS.gene98990:CDS |
| GCTAGGATTAGTAAAGAGGT+TGG | 0.463455 | 1.2:-41532141 | MS.gene98990:CDS |
| ACCATTGATTGCATTCCATC+AGG | 0.464756 | 1.2:+41532021 | None:intergenic |
| GGGTTGAGAGTATGTCGAAA+GGG | 0.464757 | 1.2:-41532383 | MS.gene98990:CDS |
| AACACTTACCGGTCTTCCTC+AGG | 0.466918 | 1.2:+41530734 | None:intergenic |
| CGAAGGAGAAGGGGAAGAAA+GGG | 0.479191 | 1.2:-41532266 | MS.gene98990:CDS |
| GGTGAAGAGATTGTTGAAGA+AGG | 0.480183 | 1.2:+41532749 | None:intergenic |
| TAATGCTAGGATTAGTAAAG+AGG | 0.482426 | 1.2:-41532145 | MS.gene98990:CDS |
| GGATGATCTTGAGAGTAAGA+AGG | 0.484093 | 1.2:-41532349 | MS.gene98990:CDS |
| GACATTAACGTAGGCTTCGC+CGG | 0.490050 | 1.2:+41532659 | None:intergenic |
| GGATTTGTTTGAGATAATGA+TGG | 0.499387 | 1.2:-41532199 | MS.gene98990:CDS |
| TGAATTTGGAGTTGGAAGAA+GGG | 0.506716 | 1.2:-41532080 | MS.gene98990:CDS |
| GAATGAGAAGTTTAATTGTA+GGG | 0.508190 | 1.2:-41532226 | MS.gene98990:CDS |
| GTTCCGGTTGCGAAGGAGAA+GGG | 0.512376 | 1.2:-41532276 | MS.gene98990:CDS |
| GTGATGAATTTGAAAGGGAA+GGG | 0.512385 | 1.2:-41532432 | MS.gene98990:CDS |
| TAGGATTAGTAAAGAGGTTG+GGG | 0.512998 | 1.2:-41532139 | MS.gene98990:CDS |
| GTAGGTGAGAATTGTGTTTG+AGG | 0.517328 | 1.2:-41530804 | MS.gene98990:intron |
| TACAGGGATGAATTTGGAGT+TGG | 0.519066 | 1.2:-41532088 | MS.gene98990:CDS |
| GCGATTCACCTTCCCAGGTA+AGG | 0.520529 | 1.2:+41532595 | None:intergenic |
| CTGATGTGCCTGAGGAAGAC+CGG | 0.533037 | 1.2:-41530742 | MS.gene98990:intron |
| TCCACCGCAACCGAATTCTT+CGG | 0.534007 | 1.2:+41532321 | None:intergenic |
| CAAACGTCCACAACTGGCAC+TGG | 0.540509 | 1.2:-41532803 | MS.gene98990:CDS |
| ACAACCGTAACTCCAGATTC+AGG | 0.541200 | 1.2:+41530779 | None:intergenic |
| AGGGATGTGATGAATTTGAA+AGG | 0.544348 | 1.2:-41532438 | MS.gene98990:CDS |
| TTTGCCGAAGAATTCGGTTG+CGG | 0.548653 | 1.2:-41532325 | MS.gene98990:CDS |
| GAAGTTTAATTGTAGGGCGA+AGG | 0.551225 | 1.2:-41532220 | MS.gene98990:CDS |
| GTCACGCGATTCACCTTCCC+AGG | 0.556675 | 1.2:+41532590 | None:intergenic |
| CAAACACAGATCGAATCCTC+TGG | 0.557147 | 1.2:+41530581 | None:intergenic |
| TTTCGGACCAGTGCCAGTTG+TGG | 0.558239 | 1.2:+41532796 | None:intergenic |
| GCGAAGCCTACGTTAATGTC+CGG | 0.558433 | 1.2:-41532656 | MS.gene98990:CDS |
| GGAAGTTGTTCCGGTTGCGA+AGG | 0.564068 | 1.2:-41532283 | MS.gene98990:CDS |
| CGGAAGGGTAAAATCATCCC+TGG | 0.564473 | 1.2:-41532636 | MS.gene98990:CDS |
| GGAGCCTGAATCTGGAGTTA+CGG | 0.567314 | 1.2:-41530783 | MS.gene98990:CDS |
| TGTTCCGGTTGCGAAGGAGA+AGG | 0.567767 | 1.2:-41532277 | MS.gene98990:CDS |
| AGCGTTAACCTTACCTGGGA+AGG | 0.576402 | 1.2:-41532603 | MS.gene98990:CDS |
| TGATGAATTTGAAAGGGAAG+GGG | 0.579912 | 1.2:-41532431 | MS.gene98990:CDS |
| ATGGATGAGAATAGATGGAA+GGG | 0.581087 | 1.2:-41532180 | MS.gene98990:CDS |
| GCCGAAGAATTCGGTTGCGG+TGG | 0.581339 | 1.2:-41532322 | MS.gene98990:CDS |
| TTCCGGTTGCGAAGGAGAAG+GGG | 0.581500 | 1.2:-41532275 | MS.gene98990:CDS |
| GGTGAATCGCGTGACTCAGA+AGG | 0.582878 | 1.2:-41532582 | MS.gene98990:CDS |
| TGTGATGAATTTGAAAGGGA+AGG | 0.584035 | 1.2:-41532433 | MS.gene98990:CDS |
| GATGGATGAGAATAGATGGA+AGG | 0.585625 | 1.2:-41532181 | MS.gene98990:CDS |
| GGGATGTGATGAATTTGAAA+GGG | 0.587219 | 1.2:-41532437 | MS.gene98990:CDS |
| TTAACGCTGATTTCGTAACC+AGG | 0.597149 | 1.2:+41532618 | None:intergenic |
| AGATTTGGAAGTTGGCCTGA+TGG | 0.599447 | 1.2:-41532036 | MS.gene98990:CDS |
| GCCTGATGGAATGCAATCAA+TGG | 0.604990 | 1.2:-41532022 | MS.gene98990:intron |
| GGTTGAGAGTATGTCGAAAG+GGG | 0.605732 | 1.2:-41532382 | MS.gene98990:CDS |
| ATTCGGGAATGCGACTGTGG+TGG | 0.607444 | 1.2:-41530638 | MS.gene98990:CDS |
| TGGGTTGAGAGTATGTCGAA+AGG | 0.608155 | 1.2:-41532384 | MS.gene98990:CDS |
| TTCATGGCAAAATACGGCGA+AGG | 0.619333 | 1.2:-41532864 | MS.gene98990:CDS |
| AGCCTACGTTAATGTCCGGA+AGG | 0.620834 | 1.2:-41532652 | MS.gene98990:CDS |
| GCCTACGTTAATGTCCGGAA+GGG | 0.648817 | 1.2:-41532651 | MS.gene98990:CDS |
| AACACACACTGATGTGCCTG+AGG | 0.650288 | 1.2:-41530750 | MS.gene98990:CDS |
| ATCGTAGAAGACAGACCAGA+CGG | 0.651665 | 1.2:-41532828 | MS.gene98990:CDS |
| TGTGGTGGAGAATACAGAGA+GGG | 0.658921 | 1.2:-41530623 | MS.gene98990:CDS |
| CAGATTCGGGAATGCGACTG+TGG | 0.673043 | 1.2:-41530641 | MS.gene98990:CDS |
| TAACGCTGATTTCGTAACCA+GGG | 0.673358 | 1.2:+41532619 | None:intergenic |
| AATCAGCGTTAACCTTACCT+GGG | 0.690159 | 1.2:-41532607 | MS.gene98990:CDS |
| GGAGGGATCTCATATTCCAG+AGG | 0.690910 | 1.2:-41530597 | MS.gene98990:CDS |
| ACGGCGAAGGAGACAAACGT+TGG | 0.691467 | 1.2:-41532851 | MS.gene98990:CDS |
| ACCCTTCCGGACATTAACGT+AGG | 0.692824 | 1.2:+41532650 | None:intergenic |
| GTTGAGAGTATGTCGAAAGG+GGG | 0.711562 | 1.2:-41532381 | MS.gene98990:CDS |
| TGGTGGAGAATACAGAGAGG+GGG | 0.719678 | 1.2:-41530621 | MS.gene98990:CDS |
| CTGTGGTGGAGAATACAGAG+AGG | 0.727134 | 1.2:-41530624 | MS.gene98990:CDS |
| GTGGTGGAGAATACAGAGAG+GGG | 0.732260 | 1.2:-41530622 | MS.gene98990:CDS |
| AGGATTAGTAAAGAGGTTGG+GGG | 0.750169 | 1.2:-41532138 | MS.gene98990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTGTTAAATTTTAAAATA+AGG | - | chr1.2:41532170-41532189 | MS.gene98990:CDS | 10.0% |
| !!! | AACTTTTAGATTTTAAAATA+CGG | + | chr1.2:41531880-41531899 | None:intergenic | 10.0% |
| !!! | ACTGTTAAATTTTAAAATAA+GGG | - | chr1.2:41532171-41532190 | MS.gene98990:CDS | 10.0% |
| !!! | ATATAATTTTTACAATAGTT+TGG | - | chr1.2:41532252-41532271 | MS.gene98990:CDS | 10.0% |
| !!! | ATTGTTAAATTTTAAAATAG+AGG | - | chr1.2:41532142-41532161 | MS.gene98990:CDS | 10.0% |
| !!! | ATTTTAAAATCTAAAAGTTT+TGG | - | chr1.2:41531881-41531900 | MS.gene98990:intron | 10.0% |
| !!! | AAACTGTCAAATTTTAAAAT+TGG | - | chr1.2:41532069-41532088 | MS.gene98990:CDS | 15.0% |
| !!! | AACTGTCAAATTTTAAAATT+GGG | - | chr1.2:41532070-41532089 | MS.gene98990:CDS | 15.0% |
| !!! | AATTTTAAAATTTGACAGTT+TGG | + | chr1.2:41532070-41532089 | None:intergenic | 15.0% |
| !!! | ATTTTAAAATTTGACAGTTT+GGG | + | chr1.2:41532069-41532088 | None:intergenic | 15.0% |
| !!! | CAAATTAAGGTTTTTATAAT+TGG | - | chr1.2:41531458-41531477 | MS.gene98990:intron | 15.0% |
| !!! | CTGTTAAATTTTAAAATAAG+GGG | - | chr1.2:41532172-41532191 | MS.gene98990:CDS | 15.0% |
| !!! | TTTAATTATTTTGGTTTTGA+TGG | - | chr1.2:41532715-41532734 | MS.gene98990:CDS | 15.0% |
| !! | AATGATATAAGCTCTTAATT+AGG | - | chr1.2:41532292-41532311 | MS.gene98990:CDS | 20.0% |
| !! | ATAGCTTATCAAAGTAATTT+AGG | - | chr1.2:41531802-41531821 | MS.gene98990:intron | 20.0% |
| !! | ATCTGCAAAATAATGAAAAT+AGG | + | chr1.2:41531850-41531869 | None:intergenic | 20.0% |
| !! | CAAAATAATTAAACACTTAC+CGG | + | chr1.2:41532708-41532727 | None:intergenic | 20.0% |
| !! | TAATTAAGAGCTTATATCAT+TGG | + | chr1.2:41532293-41532312 | None:intergenic | 20.0% |
| !! | TATGCAAAATGATGAAAATA+GGG | - | chr1.2:41532201-41532220 | MS.gene98990:CDS | 20.0% |
| !! | TCTGCAAAATAATGAAAATA+GGG | + | chr1.2:41531849-41531868 | None:intergenic | 20.0% |
| !! | TTAGATCAAATATTTGATAG+AGG | - | chr1.2:41532109-41532128 | MS.gene98990:CDS | 20.0% |
| !! | TTATGCAAAATGATGAAAAT+AGG | - | chr1.2:41532200-41532219 | MS.gene98990:CDS | 20.0% |
| !!! | AAATCAGTGTTTAACTTTTT+CGG | - | chr1.2:41532399-41532418 | MS.gene98990:CDS | 20.0% |
| !!! | AATTGGAAGGTTTTAAATTA+CGG | - | chr1.2:41531475-41531494 | MS.gene98990:intron | 20.0% |
| !!! | ACTGTCAAATTTTAAAATTG+GGG | - | chr1.2:41532071-41532090 | MS.gene98990:CDS | 20.0% |
| !!! | CTTATTTCTATAAACTCTTT+AGG | - | chr1.2:41531775-41531794 | MS.gene98990:intron | 20.0% |
| !!! | GTTTTAAACGATGTTTTTAA+GGG | + | chr1.2:41532018-41532037 | None:intergenic | 20.0% |
| !!! | TGTTTTAAACGATGTTTTTA+AGG | + | chr1.2:41532019-41532038 | None:intergenic | 20.0% |
| !!! | TTAAGGTTTTAAATCATAGT+TGG | - | chr1.2:41531591-41531610 | MS.gene98990:intron | 20.0% |
| !!! | TTAAGGTTTTTATAATTGGA+AGG | - | chr1.2:41531462-41531481 | MS.gene98990:intron | 20.0% |
| !!! | TTTGAATATTTGTTTCTGAA+TGG | - | chr1.2:41532590-41532609 | MS.gene98990:CDS | 20.0% |
| !!! | TTTGATCTAAAATGCATAAT+TGG | + | chr1.2:41532099-41532118 | None:intergenic | 20.0% |
| !!! | TTTGTTTCTGTTTCAAATTA+AGG | - | chr1.2:41531445-41531464 | MS.gene98990:intron | 20.0% |
| !!! | TTTTCATCATTTTGCATAAT+TGG | + | chr1.2:41532199-41532218 | None:intergenic | 20.0% |
| !!! | TTTTCATTATTTTGCAGATT+TGG | - | chr1.2:41531851-41531870 | MS.gene98990:intron | 20.0% |
| ! | AAAAATTGCGAATAGTTTGA+GGG | - | chr1.2:41530971-41530990 | MS.gene98990:intron | 25.0% |
| ! | AGCTTCAATTGCAATTATAT+TGG | + | chr1.2:41532430-41532449 | None:intergenic | 25.0% |
| ! | AGTTGTGACATGTTAATAAT+TGG | - | chr1.2:41531745-41531764 | MS.gene98990:intron | 25.0% |
| ! | ATCAAATATTTGATAGAGGA+GGG | - | chr1.2:41532113-41532132 | MS.gene98990:CDS | 25.0% |
| ! | ATGCAAAATGATGAAAATAG+GGG | - | chr1.2:41532202-41532221 | MS.gene98990:CDS | 25.0% |
| ! | CTGCAAAATAATGAAAATAG+GGG | + | chr1.2:41531848-41531867 | None:intergenic | 25.0% |
| ! | GAATGAGAAGTTTAATTGTA+GGG | - | chr1.2:41531202-41531221 | MS.gene98990:intron | 25.0% |
| ! | TGAATGAGAAGTTTAATTGT+AGG | - | chr1.2:41531201-41531220 | MS.gene98990:intron | 25.0% |
| ! | TGCAAAATAATGAAAATAGG+GGG | + | chr1.2:41531847-41531866 | None:intergenic | 25.0% |
| ! | TTTAGACCATTCTAAACAAT+TGG | + | chr1.2:41530658-41530677 | None:intergenic | 25.0% |
| !! | CATTAGGTAATTTAGAATTC+TGG | - | chr1.2:41532474-41532493 | MS.gene98990:CDS | 25.0% |
| !! | CGGTAAGTGTTTAATTATTT+TGG | - | chr1.2:41532706-41532725 | MS.gene98990:CDS | 25.0% |
| !! | CTTTTGTTCAAAACCTTTTT+CGG | - | chr1.2:41532560-41532579 | MS.gene98990:CDS | 25.0% |
| !! | TTAATTAGGTTGTATCCAAA+CGG | - | chr1.2:41532328-41532347 | MS.gene98990:CDS | 25.0% |
| !! | TTTCTATAAACTCTTTAGGA+TGG | - | chr1.2:41531779-41531798 | MS.gene98990:intron | 25.0% |
| !! | TTTGGGTTTGATCTAAAATA+TGG | + | chr1.2:41532052-41532071 | None:intergenic | 25.0% |
| !!! | ATTGGAAGGTTTTAAATTAC+GGG | - | chr1.2:41531476-41531495 | MS.gene98990:intron | 25.0% |
| !!! | CCACTTTTTAGTTCAAAAAT+AGG | + | chr1.2:41531915-41531934 | None:intergenic | 25.0% |
| !!! | CCTATTTTTGAACTAAAAAG+TGG | - | chr1.2:41531912-41531931 | MS.gene98990:intron | 25.0% |
| !!! | GTGAGTTTAGTATTTTTGAT+GGG | - | chr1.2:41531312-41531331 | MS.gene98990:intron | 25.0% |
| !!! | TATTGGCTTAATTGCAATTT+TGG | + | chr1.2:41532230-41532249 | None:intergenic | 25.0% |
| !!! | TTTGATGGATAATTTTGTGT+CGG | - | chr1.2:41532730-41532749 | MS.gene98990:CDS | 25.0% |
| AAAAAAGTCGAAAAGCTTTC+CGG | - | chr1.2:41530750-41530769 | MS.gene98990:CDS | 30.0% | |
| CGGATATTTGTGGTTAAATA+CGG | - | chr1.2:41532364-41532383 | MS.gene98990:CDS | 30.0% | |
| GAAAAATTGCGAATAGTTTG+AGG | - | chr1.2:41530970-41530989 | MS.gene98990:intron | 30.0% | |
| GATCAAATATTTGATAGAGG+AGG | - | chr1.2:41532112-41532131 | MS.gene98990:CDS | 30.0% | |
| TGATGAAGATCCTGAAATTA+GGG | - | chr1.2:41530929-41530948 | MS.gene98990:intron | 30.0% | |
| TGCATTTGATTGTAAGCATT+AGG | - | chr1.2:41532458-41532477 | MS.gene98990:CDS | 30.0% | |
| TGTAATATTGCGGATATTTG+TGG | - | chr1.2:41532354-41532373 | MS.gene98990:CDS | 30.0% | |
| TGTGATTTATGATATGACGA+TGG | - | chr1.2:41531957-41531976 | MS.gene98990:intron | 30.0% | |
| TTAACACTAACCCTAATTTC+AGG | + | chr1.2:41530942-41530961 | None:intergenic | 30.0% | |
| ! | AAAGATTTTGCAGAAGGTTA+AGG | - | chr1.2:41530869-41530888 | MS.gene98990:intron | 30.0% |
| ! | AAGATTTTGCAGAAGGTTAA+GGG | - | chr1.2:41530870-41530889 | MS.gene98990:intron | 30.0% |
| ! | CCATTCTAAACAATTGGTTT+CGG | + | chr1.2:41530652-41530671 | None:intergenic | 30.0% |
| ! | GATTGACTTATTCGAGTTTA+TGG | - | chr1.2:41531526-41531545 | MS.gene98990:intron | 30.0% |
| ! | GGATTTGTTTGAGATAATGA+TGG | - | chr1.2:41531229-41531248 | MS.gene98990:intron | 30.0% |
| ! | GTTTGTTTGTGTTTTCTGTT+TGG | - | chr1.2:41531566-41531585 | MS.gene98990:intron | 30.0% |
| ! | TAATGCTAGGATTAGTAAAG+AGG | - | chr1.2:41531283-41531302 | MS.gene98990:intron | 30.0% |
| !! | AACTATTTTACTAGTTCTCC+CGG | + | chr1.2:41531729-41531748 | None:intergenic | 30.0% |
| !! | GGTGAGTTTAGTATTTTTGA+TGG | - | chr1.2:41531311-41531330 | MS.gene98990:intron | 30.0% |
| !! | GTGTTTTCTGTTTGGAATTA+AGG | - | chr1.2:41531574-41531593 | MS.gene98990:intron | 30.0% |
| !! | TAATGATGGATGAGAATAGA+TGG | - | chr1.2:41531243-41531262 | MS.gene98990:intron | 30.0% |
| !! | TGATTTGAAGGTTATTTTCG+TGG | + | chr1.2:41530725-41530744 | None:intergenic | 30.0% |
| !!! | AGTTTGTGTTTTAGCCTTTT+AGG | - | chr1.2:41531653-41531672 | MS.gene98990:intron | 30.0% |
| !!! | CTTTTTTGACAGTGATTTGA+AGG | + | chr1.2:41530737-41530756 | None:intergenic | 30.0% |
| !!! | GTCATCGATGATTTTGAAAT+TGG | + | chr1.2:41530703-41530722 | None:intergenic | 30.0% |
| AGGGATGTGATGAATTTGAA+AGG | - | chr1.2:41530990-41531009 | MS.gene98990:intron | 35.0% | |
| ATGGATGAGAATAGATGGAA+GGG | - | chr1.2:41531248-41531267 | MS.gene98990:intron | 35.0% | |
| ATTGTTCAGAGATGGAGATT+TGG | - | chr1.2:41531377-41531396 | MS.gene98990:intron | 35.0% | |
| CACAAGTGTTTATGCCTAAA+AGG | + | chr1.2:41531670-41531689 | None:intergenic | 35.0% | |
| CCGAAACCAATTGTTTAGAA+TGG | - | chr1.2:41530649-41530668 | MS.gene98990:intron | 35.0% | |
| CTCGAATAAGTCAATCCAAA+CGG | + | chr1.2:41531522-41531541 | None:intergenic | 35.0% | |
| CTGATGAAGATCCTGAAATT+AGG | - | chr1.2:41530928-41530947 | MS.gene98990:intron | 35.0% | |
| GCATTCTCATCAGAGATATA+CGG | + | chr1.2:41530909-41530928 | None:intergenic | 35.0% | |
| GGGATGTGATGAATTTGAAA+GGG | - | chr1.2:41530991-41531010 | MS.gene98990:intron | 35.0% | |
| GTGATGAATTTGAAAGGGAA+GGG | - | chr1.2:41530996-41531015 | MS.gene98990:intron | 35.0% | |
| GTTGTGTTCAAATGCAGATT+CGG | - | chr1.2:41532773-41532792 | MS.gene98990:CDS | 35.0% | |
| TGATGAATTTGAAAGGGAAG+GGG | - | chr1.2:41530997-41531016 | MS.gene98990:intron | 35.0% | |
| TGTGATGAATTTGAAAGGGA+AGG | - | chr1.2:41530995-41531014 | MS.gene98990:intron | 35.0% | |
| TTCAAATCACGTTCCGAAAA+AGG | + | chr1.2:41532576-41532595 | None:intergenic | 35.0% | |
| TTGTGTTCAAATGCAGATTC+GGG | - | chr1.2:41532774-41532793 | MS.gene98990:CDS | 35.0% | |
| TTTAAATTACGGGTGCATTG+TGG | - | chr1.2:41531486-41531505 | MS.gene98990:intron | 35.0% | |
| ! | AGAAGGAAAGATTTTGCAGA+AGG | - | chr1.2:41530863-41530882 | MS.gene98990:intron | 35.0% |
| ! | ATGAATTTGGAGTTGGAAGA+AGG | - | chr1.2:41531347-41531366 | MS.gene98990:intron | 35.0% |
| ! | CTAGGATTAGTAAAGAGGTT+GGG | - | chr1.2:41531288-41531307 | MS.gene98990:intron | 35.0% |
| ! | CTTATTCGAGTTTATGGACT+AGG | - | chr1.2:41531532-41531551 | MS.gene98990:intron | 35.0% |
| ! | TAGGATTAGTAAAGAGGTTG+GGG | - | chr1.2:41531289-41531308 | MS.gene98990:intron | 35.0% |
| ! | TGAATGGCTGTGAATTTTGT+AGG | - | chr1.2:41532606-41532625 | MS.gene98990:CDS | 35.0% |
| ! | TGAATTTGGAGTTGGAAGAA+GGG | - | chr1.2:41531348-41531367 | MS.gene98990:intron | 35.0% |
| !! | ATTCGATCTGTGTTTGGTTT+TGG | - | chr1.2:41532854-41532873 | MS.gene98990:CDS | 35.0% |
| !! | ATTTTTGATGGGTCTGTTAC+AGG | - | chr1.2:41531323-41531342 | MS.gene98990:intron | 35.0% |
| !! | GTTGATTTTGGAGAAGGTTA+GGG | - | chr1.2:41531019-41531038 | MS.gene98990:intron | 35.0% |
| !! | TTTTTGATGGGTCTGTTACA+GGG | - | chr1.2:41531324-41531343 | MS.gene98990:intron | 35.0% |
| AAATCAGCGTTAACCTTACC+TGG | - | chr1.2:41530820-41530839 | MS.gene98990:intron | 40.0% | |
| AATCAGCGTTAACCTTACCT+GGG | - | chr1.2:41530821-41530840 | MS.gene98990:intron | 40.0% | |
| AGAGATGGAGATTTGGAAGT+TGG | - | chr1.2:41531384-41531403 | MS.gene98990:intron | 40.0% | |
| CAAACGGCGTTGTAATATTG+CGG | - | chr1.2:41532344-41532363 | MS.gene98990:CDS | 40.0% | |
| CTCTCAAGATCATCCTTAAC+CGG | + | chr1.2:41531074-41531093 | None:intergenic | 40.0% | |
| GAAGTTTAATTGTAGGGCGA+AGG | - | chr1.2:41531208-41531227 | MS.gene98990:intron | 40.0% | |
| GATGGATGAGAATAGATGGA+AGG | - | chr1.2:41531247-41531266 | MS.gene98990:intron | 40.0% | |
| GGATGATCTTGAGAGTAAGA+AGG | - | chr1.2:41531079-41531098 | MS.gene98990:intron | 40.0% | |
| GGTGAAGAGATTGTTGAAGA+AGG | + | chr1.2:41530682-41530701 | None:intergenic | 40.0% | |
| GTAGGTGAGAATTGTGTTTG+AGG | - | chr1.2:41532624-41532643 | MS.gene98990:CDS | 40.0% | |
| GTCTGTTACAGGGATGAATT+TGG | - | chr1.2:41531334-41531353 | MS.gene98990:intron | 40.0% | |
| TTTGGAGAAGGTTAGGGTTT+GGG | - | chr1.2:41531025-41531044 | MS.gene98990:intron | 40.0% | |
| ! | ACCATTGATTGCATTCCATC+AGG | + | chr1.2:41531410-41531429 | None:intergenic | 40.0% |
| ! | AGGATTAGTAAAGAGGTTGG+GGG | - | chr1.2:41531290-41531309 | MS.gene98990:intron | 40.0% |
| ! | GAAGGTTTTGCCGAAGAATT+CGG | - | chr1.2:41531097-41531116 | MS.gene98990:intron | 40.0% |
| ! | GCTAGGATTAGTAAAGAGGT+TGG | - | chr1.2:41531287-41531306 | MS.gene98990:intron | 40.0% |
| ! | GGAAGTTGATTGTTCAGAGA+TGG | - | chr1.2:41531369-41531388 | MS.gene98990:intron | 40.0% |
| ! | GTTTTACGCAGAGTAATGCT+AGG | - | chr1.2:41531270-41531289 | MS.gene98990:intron | 40.0% |
| ! | TACAGGGATGAATTTGGAGT+TGG | - | chr1.2:41531340-41531359 | MS.gene98990:intron | 40.0% |
| !! | GGTTGATTTTGGAGAAGGTT+AGG | - | chr1.2:41531018-41531037 | MS.gene98990:intron | 40.0% |
| !! | TAACGCTGATTTCGTAACCA+GGG | + | chr1.2:41530812-41530831 | None:intergenic | 40.0% |
| !! | TTAACGCTGATTTCGTAACC+AGG | + | chr1.2:41530813-41530832 | None:intergenic | 40.0% |
| !! | TTTTGGAGAAGGTTAGGGTT+TGG | - | chr1.2:41531024-41531043 | MS.gene98990:intron | 40.0% |
| AAAGGAGGAGGAAGTTGTTC+CGG | - | chr1.2:41531136-41531155 | MS.gene98990:intron | 45.0% | |
| ACAACCGTAACTCCAGATTC+AGG | + | chr1.2:41532652-41532671 | None:intergenic | 45.0% | |
| ACGGGTGCATTGTGGTATTT+AGG | - | chr1.2:41531494-41531513 | MS.gene98990:intron | 45.0% | |
| ATCGTAGAAGACAGACCAGA+CGG | - | chr1.2:41530600-41530619 | MS.gene98990:CDS | 45.0% | |
| CAAACACAGATCGAATCCTC+TGG | + | chr1.2:41532850-41532869 | None:intergenic | 45.0% | |
| CAGAGGATTCGATCTGTGTT+TGG | - | chr1.2:41532848-41532867 | MS.gene98990:CDS | 45.0% | |
| CGCAATATTACAACGCCGTT+TGG | + | chr1.2:41532346-41532365 | None:intergenic | 45.0% | |
| CGGGTGCATTGTGGTATTTA+GGG | - | chr1.2:41531495-41531514 | MS.gene98990:intron | 45.0% | |
| GCCTGATGGAATGCAATCAA+TGG | - | chr1.2:41531406-41531425 | MS.gene98990:intron | 45.0% | |
| TCATAAACACTGCGACTGAC+CGG | - | chr1.2:41531707-41531726 | MS.gene98990:intron | 45.0% | |
| TGATGTTGCAAGCTTAGCTG+TGG | - | chr1.2:41532530-41532549 | MS.gene98990:CDS | 45.0% | |
| TTTGCCGAAGAATTCGGTTG+CGG | - | chr1.2:41531103-41531122 | MS.gene98990:intron | 45.0% | |
| ! | AGATTTGGAAGTTGGCCTGA+TGG | - | chr1.2:41531392-41531411 | MS.gene98990:intron | 45.0% |
| ! | CAGGGATGATTTTACCCTTC+CGG | + | chr1.2:41530794-41530813 | None:intergenic | 45.0% |
| ! | GGGTTGAGAGTATGTCGAAA+GGG | - | chr1.2:41531045-41531064 | MS.gene98990:intron | 45.0% |
| ! | GGTTGAGAGTATGTCGAAAG+GGG | - | chr1.2:41531046-41531065 | MS.gene98990:intron | 45.0% |
| ! | GTTGAGAGTATGTCGAAAGG+GGG | - | chr1.2:41531047-41531066 | MS.gene98990:intron | 45.0% |
| ! | TGGGTTGAGAGTATGTCGAA+AGG | - | chr1.2:41531044-41531063 | MS.gene98990:intron | 45.0% |
| ! | TGTGGTATTTAGGGTCCGTT+TGG | - | chr1.2:41531504-41531523 | MS.gene98990:intron | 45.0% |
| ! | TGTGGTGGAGAATACAGAGA+GGG | - | chr1.2:41532805-41532824 | MS.gene98990:CDS | 45.0% |
| !! | GAAAGGGAAGGGGTTGATTT+TGG | - | chr1.2:41531007-41531026 | MS.gene98990:intron | 45.0% |
| !! | GAAGGGGTTGATTTTGGAGA+AGG | - | chr1.2:41531013-41531032 | MS.gene98990:intron | 45.0% |
| !! | TTGTAAAAATTATATATTAT+TGG | + | chr1.2:41532247-41532266 | None:intergenic | 5.0% |
| !!! | TATTTTAAAATTTAACAATT+TGG | + | chr1.2:41532141-41532160 | None:intergenic | 5.0% |
| AACACACACTGATGTGCCTG+AGG | - | chr1.2:41532678-41532697 | MS.gene98990:CDS | 50.0% | |
| AACACTTACCGGTCTTCCTC+AGG | + | chr1.2:41532697-41532716 | None:intergenic | 50.0% | |
| ACCCTTCCGGACATTAACGT+AGG | + | chr1.2:41530781-41530800 | None:intergenic | 50.0% | |
| ACGGAACAAACGTCCACAAC+TGG | - | chr1.2:41530619-41530638 | MS.gene98990:CDS | 50.0% | |
| AGCCTACGTTAATGTCCGGA+AGG | - | chr1.2:41530776-41530795 | MS.gene98990:CDS | 50.0% | |
| AGCGTTAACCTTACCTGGGA+AGG | - | chr1.2:41530825-41530844 | MS.gene98990:intron | 50.0% | |
| CATAAACACTGCGACTGACC+GGG | - | chr1.2:41531708-41531727 | MS.gene98990:intron | 50.0% | |
| CGAAGGAGAAGGGGAAGAAA+GGG | - | chr1.2:41531162-41531181 | MS.gene98990:intron | 50.0% | |
| CGGAAGGGTAAAATCATCCC+TGG | - | chr1.2:41530792-41530811 | MS.gene98990:CDS | 50.0% | |
| GACATTAACGTAGGCTTCGC+CGG | + | chr1.2:41530772-41530791 | None:intergenic | 50.0% | |
| GCCTACGTTAATGTCCGGAA+GGG | - | chr1.2:41530777-41530796 | MS.gene98990:CDS | 50.0% | |
| GCGAAGCCTACGTTAATGTC+CGG | - | chr1.2:41530772-41530791 | MS.gene98990:CDS | 50.0% | |
| GGAGGGATCTCATATTCCAG+AGG | - | chr1.2:41532831-41532850 | MS.gene98990:CDS | 50.0% | |
| GGTGGAGAAGAAAAAGGAGG+AGG | - | chr1.2:41531124-41531143 | MS.gene98990:intron | 50.0% | |
| GGTTGCGGTGGAGAAGAAAA+AGG | - | chr1.2:41531118-41531137 | MS.gene98990:intron | 50.0% | |
| GTGTTTGAGGAGCCTGAATC+TGG | - | chr1.2:41532637-41532656 | MS.gene98990:CDS | 50.0% | |
| TCCACCGCAACCGAATTCTT+CGG | + | chr1.2:41531110-41531129 | None:intergenic | 50.0% | |
| TGCGGTGGAGAAGAAAAAGG+AGG | - | chr1.2:41531121-41531140 | MS.gene98990:intron | 50.0% | |
| TGGTGGAGAATACAGAGAGG+GGG | - | chr1.2:41532807-41532826 | MS.gene98990:CDS | 50.0% | |
| TTGTGGACGTTTGTTCCGTC+TGG | + | chr1.2:41530618-41530637 | None:intergenic | 50.0% | |
| ! | CTGTGGTGGAGAATACAGAG+AGG | - | chr1.2:41532804-41532823 | MS.gene98990:CDS | 50.0% |
| ! | GGAGCCTGAATCTGGAGTTA+CGG | - | chr1.2:41532645-41532664 | MS.gene98990:CDS | 50.0% |
| ! | GTGGTGGAGAATACAGAGAG+GGG | - | chr1.2:41532806-41532825 | MS.gene98990:CDS | 50.0% |
| ACGGCGAAGGAGACAAACGT+TGG | - | chr1.2:41530577-41530596 | MS.gene98990:CDS | 55.0% | |
| AGAATACAGAGAGGGGGTGG+AGG | - | chr1.2:41532813-41532832 | MS.gene98990:CDS | 55.0% | |
| ATTCGGGAATGCGACTGTGG+TGG | - | chr1.2:41532790-41532809 | MS.gene98990:CDS | 55.0% | |
| CAAACGTCCACAACTGGCAC+TGG | - | chr1.2:41530625-41530644 | MS.gene98990:CDS | 55.0% | |
| CAGATTCGGGAATGCGACTG+TGG | - | chr1.2:41532787-41532806 | MS.gene98990:CDS | 55.0% | |
| CTGATGTGCCTGAGGAAGAC+CGG | - | chr1.2:41532686-41532705 | MS.gene98990:CDS | 55.0% | |
| GAATACAGAGAGGGGGTGGA+GGG | - | chr1.2:41532814-41532833 | MS.gene98990:CDS | 55.0% | |
| GAGTATGTCGAAAGGGGGAC+CGG | - | chr1.2:41531052-41531071 | MS.gene98990:intron | 55.0% | |
| GCGAAGGAGAAGGGGAAGAA+AGG | - | chr1.2:41531161-41531180 | MS.gene98990:intron | 55.0% | |
| GCGATTCACCTTCCCAGGTA+AGG | + | chr1.2:41530836-41530855 | None:intergenic | 55.0% | |
| GGAAGTTGTTCCGGTTGCGA+AGG | - | chr1.2:41531145-41531164 | MS.gene98990:intron | 55.0% | |
| GGTGAATCGCGTGACTCAGA+AGG | - | chr1.2:41530846-41530865 | MS.gene98990:intron | 55.0% | |
| GTTCCGGTTGCGAAGGAGAA+GGG | - | chr1.2:41531152-41531171 | MS.gene98990:intron | 55.0% | |
| TGGAGAATACAGAGAGGGGG+TGG | - | chr1.2:41532810-41532829 | MS.gene98990:CDS | 55.0% | |
| TGTTCCGGTTGCGAAGGAGA+AGG | - | chr1.2:41531151-41531170 | MS.gene98990:intron | 55.0% | |
| TTCCCCTTCTCCTTCGCAAC+CGG | + | chr1.2:41531158-41531177 | None:intergenic | 55.0% | |
| TTCCGGTTGCGAAGGAGAAG+GGG | - | chr1.2:41531153-41531172 | MS.gene98990:intron | 55.0% | |
| TTTCGGACCAGTGCCAGTTG+TGG | + | chr1.2:41530635-41530654 | None:intergenic | 55.0% | |
| GCCGAAGAATTCGGTTGCGG+TGG | - | chr1.2:41531106-41531125 | MS.gene98990:intron | 60.0% | |
| GTCACGCGATTCACCTTCCC+AGG | + | chr1.2:41530841-41530860 | None:intergenic | 60.0% | |
| GTCGAAAGGGGGACCGGTTA+AGG | - | chr1.2:41531058-41531077 | MS.gene98990:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 41530567 | 41532883 | 41530567 | ID=MS.gene98990 |
| chr1.2 | mRNA | 41530567 | 41532883 | 41530567 | ID=MS.gene98990.t1;Parent=MS.gene98990 |
| chr1.2 | exon | 41532023 | 41532883 | 41532023 | ID=MS.gene98990.t1.exon1;Parent=MS.gene98990.t1 |
| chr1.2 | CDS | 41532023 | 41532883 | 41532023 | ID=cds.MS.gene98990.t1;Parent=MS.gene98990.t1 |
| chr1.2 | exon | 41530743 | 41530822 | 41530743 | ID=MS.gene98990.t1.exon2;Parent=MS.gene98990.t1 |
| chr1.2 | CDS | 41530743 | 41530822 | 41530743 | ID=cds.MS.gene98990.t1;Parent=MS.gene98990.t1 |
| chr1.2 | exon | 41530567 | 41530660 | 41530567 | ID=MS.gene98990.t1.exon3;Parent=MS.gene98990.t1 |
| chr1.2 | CDS | 41530567 | 41530660 | 41530567 | ID=cds.MS.gene98990.t1;Parent=MS.gene98990.t1 |
| Gene Sequence |
| Protein sequence |
