Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007310.01.T01 | KAF8039285.1 | 62.069 | 87 | 11 | 1 | 4 | 90 | 24 | 88 | 9.93E-26 | 105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007310.01.T01 | A0A072U4H1 | 62.069 | 87 | 11 | 1 | 4 | 90 | 103 | 167 | 2.16e-25 | 104 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048065.01 | MsG0280007310.01 | 0.807021 | 6.196115e-50 | 3.413884e-47 |
| MsG0080048826.01 | MsG0280007310.01 | 0.811202 | 7.877023e-51 | 4.845612e-48 |
| MsG0080048849.01 | MsG0280007310.01 | 0.809877 | 1.522987e-50 | 9.046424e-48 |
| MsG0080049002.01 | MsG0280007310.01 | 0.820053 | 8.403184e-53 | 6.578976e-50 |
| MsG0180000355.01 | MsG0280007310.01 | 0.810709 | 1.007317e-50 | 6.116298e-48 |
| MsG0180001610.01 | MsG0280007310.01 | 0.827437 | 1.564898e-54 | 1.510799e-51 |
| MsG0180002399.01 | MsG0280007310.01 | 0.813696 | 2.245452e-51 | 1.476707e-48 |
| MsG0180003353.01 | MsG0280007310.01 | 0.818821 | 1.604577e-52 | 1.213829e-49 |
| MsG0180003885.01 | MsG0280007310.01 | 0.848489 | 5.934561e-60 | 1.090986e-56 |
| MsG0180004390.01 | MsG0280007310.01 | 0.828476 | 8.800030e-55 | 8.756847e-52 |
| MsG0180004428.01 | MsG0280007310.01 | 0.811835 | 5.737961e-51 | 3.589235e-48 |
| MsG0180004466.01 | MsG0280007310.01 | 0.862957 | 3.505763e-64 | 1.045341e-60 |
| MsG0180004493.01 | MsG0280007310.01 | 0.806230 | 9.100510e-50 | 4.913619e-47 |
| MsG0180004605.01 | MsG0280007310.01 | -0.809042 | 2.300664e-50 | 1.336570e-47 |
| MsG0180005169.01 | MsG0280007310.01 | 0.808554 | 2.925066e-50 | 1.677564e-47 |
| MsG0180006031.01 | MsG0280007310.01 | 0.821637 | 3.631423e-53 | 2.970876e-50 |
| MsG0180006096.01 | MsG0280007310.01 | 0.824475 | 7.911141e-54 | 7.014506e-51 |
| MsG0280006309.01 | MsG0280007310.01 | 0.809311 | 2.015170e-50 | 1.179140e-47 |
| MsG0280007307.01 | MsG0280007310.01 | 0.857809 | 1.266881e-62 | 3.165632e-59 |
| MsG0280007309.01 | MsG0280007310.01 | 0.878367 | 2.975000e-69 | 1.549272e-65 |
| MsG0280007310.01 | MsG0280007763.01 | 0.815871 | 7.404548e-52 | 5.165780e-49 |
| MsG0280007310.01 | MsG0280007903.01 | 0.819654 | 1.036897e-52 | 8.027477e-50 |
| MsG0280007310.01 | MsG0280009256.01 | 0.819910 | 9.059615e-53 | 7.064487e-50 |
| MsG0280007310.01 | MsG0280010082.01 | 0.805025 | 1.629233e-49 | 8.528290e-47 |
| MsG0280007310.01 | MsG0280010916.01 | 0.812986 | 3.215725e-51 | 2.074373e-48 |
| MsG0280007310.01 | MsG0280011255.01 | 0.817370 | 3.416338e-52 | 2.483331e-49 |
| MsG0280007310.01 | MsG0380011844.01 | 0.802429 | 5.635430e-49 | 2.759962e-46 |
| MsG0280007310.01 | MsG0380012005.01 | 0.816023 | 6.847628e-52 | 4.797470e-49 |
| MsG0280007310.01 | MsG0380012011.01 | 0.809906 | 1.500909e-50 | 8.922164e-48 |
| MsG0280007310.01 | MsG0380012012.01 | 0.822385 | 2.437422e-53 | 2.037176e-50 |
| MsG0280007310.01 | MsG0380012122.01 | 0.814438 | 1.540967e-51 | 1.033995e-48 |
| MsG0280007310.01 | MsG0380015372.01 | 0.832251 | 1.051846e-55 | 1.169044e-52 |
| MsG0280007310.01 | MsG0380015703.01 | 0.816864 | 4.438468e-52 | 3.181980e-49 |
| MsG0280007310.01 | MsG0380015784.01 | 0.806781 | 6.963983e-50 | 3.813146e-47 |
| MsG0280007310.01 | MsG0380015870.01 | 0.802400 | 5.711128e-49 | 2.795024e-46 |
| MsG0280007310.01 | MsG0380015930.01 | 0.801634 | 8.208351e-49 | 3.939400e-46 |
| MsG0280007310.01 | MsG0380016126.01 | 0.805518 | 1.284587e-49 | 6.809850e-47 |
| MsG0280007310.01 | MsG0380016347.01 | -0.807617 | 4.630433e-50 | 2.591057e-47 |
| MsG0280007310.01 | MsG0380016529.01 | 0.829134 | 6.101506e-55 | 6.189238e-52 |
| MsG0280007310.01 | MsG0380016540.01 | 0.814263 | 1.683988e-51 | 1.124601e-48 |
| MsG0280007310.01 | MsG0380016671.01 | 0.816697 | 4.839175e-52 | 3.453210e-49 |
| MsG0280007310.01 | MsG0380016820.01 | 0.830071 | 3.609280e-55 | 3.762286e-52 |
| MsG0280007310.01 | MsG0380017202.01 | 0.831284 | 1.821447e-55 | 1.967453e-52 |
| MsG0280007310.01 | MsG0380017244.01 | 0.808929 | 2.432540e-50 | 1.408818e-47 |
| MsG0280007310.01 | MsG0380017931.01 | 0.826733 | 2.307561e-54 | 2.182314e-51 |
| MsG0280007310.01 | MsG0480018584.01 | 0.849927 | 2.361392e-60 | 4.549017e-57 |
| MsG0280007310.01 | MsG0480018653.01 | 0.807213 | 5.640850e-50 | 3.123566e-47 |
| MsG0280007310.01 | MsG0480018911.01 | 0.841689 | 4.081488e-58 | 6.043615e-55 |
| MsG0280007310.01 | MsG0480020024.01 | 0.835443 | 1.672953e-56 | 2.046095e-53 |
| MsG0280007310.01 | MsG0480020887.01 | 0.829679 | 4.498014e-55 | 4.636458e-52 |
| MsG0280007310.01 | MsG0480020935.01 | -0.817038 | 4.055924e-52 | 2.921657e-49 |
| MsG0280007310.01 | MsG0480022491.01 | -0.801343 | 9.416376e-49 | 4.486178e-46 |
| MsG0280007310.01 | MsG0480022586.01 | 0.801936 | 7.117291e-49 | 3.442008e-46 |
| MsG0280007310.01 | MsG0480022624.01 | 0.808245 | 3.405043e-50 | 1.937162e-47 |
| MsG0280007310.01 | MsG0480022994.01 | 0.803115 | 4.065511e-49 | 2.026099e-46 |
| MsG0280007310.01 | MsG0480023073.01 | 0.825840 | 3.763459e-54 | 3.470091e-51 |
| MsG0280007310.01 | MsG0480024030.01 | 0.822615 | 2.155031e-53 | 1.813072e-50 |
| MsG0280007310.01 | MsG0580024790.01 | -0.836829 | 7.437926e-57 | 9.484157e-54 |
| MsG0280007310.01 | MsG0580025059.01 | 0.808441 | 3.091852e-50 | 1.768091e-47 |
| MsG0280007310.01 | MsG0580025816.01 | 0.802922 | 4.457116e-49 | 2.210409e-46 |
| MsG0280007310.01 | MsG0580027103.01 | 0.803088 | 4.118137e-49 | 2.050849e-46 |
| MsG0280007310.01 | MsG0580027394.01 | 0.812072 | 5.094732e-51 | 3.207408e-48 |
| MsG0280007310.01 | MsG0580028630.01 | 0.805087 | 1.581206e-49 | 8.290363e-47 |
| MsG0280007310.01 | MsG0680030313.01 | 0.835274 | 1.845572e-56 | 2.246026e-53 |
| MsG0280007310.01 | MsG0680030373.01 | 0.824465 | 7.953794e-54 | 7.050266e-51 |
| MsG0280007310.01 | MsG0680030515.01 | 0.811614 | 6.410009e-51 | 3.986202e-48 |
| MsG0280007310.01 | MsG0680031939.01 | 0.800066 | 1.715369e-48 | 7.912293e-46 |
| MsG0280007310.01 | MsG0680032827.01 | 0.806825 | 6.815231e-50 | 3.736045e-47 |
| MsG0280007310.01 | MsG0680033377.01 | 0.805898 | 1.068487e-49 | 5.720203e-47 |
| MsG0280007310.01 | MsG0680035859.01 | 0.807454 | 5.014906e-50 | 2.794478e-47 |
| MsG0280007310.01 | MsG0780036486.01 | 0.806787 | 6.943059e-50 | 3.802302e-47 |
| MsG0280007310.01 | MsG0780036659.01 | 0.808337 | 3.254646e-50 | 1.856057e-47 |
| MsG0280007310.01 | MsG0780036757.01 | 0.815646 | 8.309281e-52 | 5.761991e-49 |
| MsG0280007310.01 | MsG0780037395.01 | 0.804357 | 2.246155e-49 | 1.155716e-46 |
| MsG0280007310.01 | MsG0780038377.01 | 0.803778 | 2.962993e-49 | 1.502045e-46 |
| MsG0280007310.01 | MsG0780038378.01 | 0.811660 | 6.264019e-51 | 3.900046e-48 |
| MsG0280007310.01 | MsG0780039429.01 | 0.821647 | 3.613091e-53 | 2.956682e-50 |
| MsG0280007310.01 | MsG0780041391.01 | 0.807965 | 3.905271e-50 | 2.205244e-47 |
| MsG0280007310.01 | MsG0780041634.01 | 0.835224 | 1.900786e-56 | 2.309657e-53 |
| MsG0280007310.01 | MsG0780041673.01 | 0.800907 | 1.156498e-48 | 5.449664e-46 |
| MsG0280007310.01 | MsG0780041747.01 | 0.808473 | 3.044332e-50 | 1.742319e-47 |
| MsG0280007310.01 | MsG0880041947.01 | 0.827828 | 1.261021e-54 | 1.231229e-51 |
| MsG0280007310.01 | MsG0880042022.01 | 0.810381 | 1.185851e-50 | 7.137112e-48 |
| MsG0280007310.01 | MsG0880043157.01 | 0.807257 | 5.520689e-50 | 3.060550e-47 |
| MsG0280007310.01 | MsG0880043955.01 | 0.805733 | 1.157318e-49 | 6.169983e-47 |
| MsG0280007310.01 | MsG0880044005.01 | 0.820256 | 7.551716e-53 | 5.945234e-50 |
| MsG0280007310.01 | MsG0880044036.01 | 0.816981 | 4.178626e-52 | 3.005424e-49 |
| MsG0280007310.01 | MsG0880044142.01 | 0.831728 | 1.416314e-55 | 1.550437e-52 |
| MsG0280007310.01 | MsG0880045722.01 | 0.811338 | 7.361654e-51 | 4.544579e-48 |
| MsG0280007310.01 | MsG0880045765.01 | 0.817640 | 2.969059e-52 | 2.174213e-49 |
| MsG0280007310.01 | MsG0880045992.01 | 0.823605 | 1.266046e-53 | 1.095268e-50 |
| MsG0280007310.01 | MsG0880047394.01 | 0.806940 | 6.443797e-50 | 3.542931e-47 |
| MsG0280007310.01 | MsG0880047481.01 | -0.809288 | 2.038006e-50 | 1.191806e-47 |
| MsG0280007310.01 | MsG0880047538.01 | 0.815067 | 1.117559e-51 | 7.627067e-49 |
| MsG0280007310.01 | MsG0880047703.01 | 0.801893 | 7.262329e-49 | 3.508571e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007310.01.T01 | MTR_7g115670 | 62.069 | 87 | 11 | 1 | 4 | 90 | 103 | 167 | 5.48e-29 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007310.01.T01 | AT1G08640 | 61.628 | 86 | 11 | 2 | 5 | 90 | 113 | 176 | 9.75e-25 | 94.4 |
Find 15 sgRNAs with CRISPR-Local
Find 64 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAAGTCCACAAACTTTA+TGG | 0.072335 | 2:+13360602 | MsG0280007310.01.T01:CDS |
| CCATAAAGTTTGTGGACTTT+TGG | 0.215699 | 2:-13360602 | None:intergenic |
| CTTGGTCCCCAAGGTATAAT+TGG | 0.268204 | 2:-13360473 | None:intergenic |
| TCAGTTGAGTAATCGGAAAA+AGG | 0.325391 | 2:+13359867 | MsG0280007310.01.T01:CDS |
| TGATGGCTCAGTTGAGTAAT+CGG | 0.411340 | 2:+13359860 | MsG0280007310.01.T01:CDS |
| CAATTCAACCATAAAGTTTG+TGG | 0.425453 | 2:-13360610 | None:intergenic |
| CAAACAGCCAATTATACCTT+GGG | 0.467405 | 2:+13360466 | MsG0280007310.01.T01:CDS |
| GGCATATGACAAAGTTATGA+TGG | 0.471615 | 2:+13359843 | MsG0280007310.01.T01:CDS |
| AAATTGAATGCAGGTTTCAA+AGG | 0.532979 | 2:+13360427 | MsG0280007310.01.T01:intron |
| AAATGATGTGCGCATCAACT+TGG | 0.546081 | 2:+13360982 | MsG0280007310.01.T01:CDS |
| AATGTTGATCCAGCTCGAAA+AGG | 0.548403 | 2:+13359822 | None:intergenic |
| CAATTATACCTTGGGGACCA+AGG | 0.553731 | 2:+13360474 | MsG0280007310.01.T01:CDS |
| ACAAACAGCCAATTATACCT+TGG | 0.553845 | 2:+13360465 | MsG0280007310.01.T01:CDS |
| ATAACAAACCTTGGTCCCCA+AGG | 0.616918 | 2:-13360482 | None:intergenic |
| AAACAGCCAATTATACCTTG+GGG | 0.721557 | 2:+13360467 | MsG0280007310.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATACAAATTACTCA+TGG | - | Chr2:13360734-13360753 | None:intergenic | 15.0% |
| !! | AAGCAAATAAACAAAATGTT+AGG | - | Chr2:13360385-13360404 | None:intergenic | 20.0% |
| !! | AGCAAATAAACAAAATGTTA+GGG | - | Chr2:13360384-13360403 | None:intergenic | 20.0% |
| !! | ATAATGATTAATCGTATTCT+TGG | - | Chr2:13360236-13360255 | None:intergenic | 20.0% |
| !!! | AATTTTGTATACGAAGAATT+GGG | + | Chr2:13360151-13360170 | MsG0280007310.01.T01:intron | 20.0% |
| !!! | ATATTTTCTAAATTGAATGC+AGG | + | Chr2:13360418-13360437 | MsG0280007310.01.T01:intron | 20.0% |
| !!! | ATTTATTTTCATCTACAGTT+TGG | + | Chr2:13360756-13360775 | MsG0280007310.01.T01:intron | 20.0% |
| ! | AAAATGTTAGGGTGAAATAT+TGG | - | Chr2:13360373-13360392 | None:intergenic | 25.0% |
| ! | AAATGTTAGGGTGAAATATT+GGG | - | Chr2:13360372-13360391 | None:intergenic | 25.0% |
| ! | AATAATGTCAAAAATCCAAG+TGG | - | Chr2:13360922-13360941 | None:intergenic | 25.0% |
| ! | AGCAGTAATAAAAGAGTAAT+TGG | - | Chr2:13360670-13360689 | None:intergenic | 25.0% |
| ! | ATGGCATGTTTAATTCATAA+GGG | - | Chr2:13360715-13360734 | None:intergenic | 25.0% |
| ! | ATGGTTGAATTGTGTTAATT+AGG | + | Chr2:13360621-13360640 | MsG0280007310.01.T01:intron | 25.0% |
| ! | TCTTCGTATACAAAATTGAT+AGG | - | Chr2:13360148-13360167 | None:intergenic | 25.0% |
| !! | CAATTTTGTATACGAAGAAT+TGG | + | Chr2:13360150-13360169 | MsG0280007310.01.T01:intron | 25.0% |
| !!! | AGATACTTCTTAGTTTGTTT+TGG | + | Chr2:13359986-13360005 | MsG0280007310.01.T01:intron | 25.0% |
| !!! | CATTGTAATGAAAAGTGTTA+AGG | - | Chr2:13360204-13360223 | None:intergenic | 25.0% |
| AAATTGAATGCAGGTTTCAA+AGG | + | Chr2:13360427-13360446 | MsG0280007310.01.T01:intron | 30.0% | |
| AACATGATGAAATTTGACAG+TGG | - | Chr2:13360838-13360857 | None:intergenic | 30.0% | |
| AATATAGCATAGATGATGTG+GGG | - | Chr2:13360327-13360346 | None:intergenic | 30.0% | |
| AATGTTAGGGTGAAATATTG+GGG | - | Chr2:13360371-13360390 | None:intergenic | 30.0% | |
| ACAATATAGCATAGATGATG+TGG | - | Chr2:13360329-13360348 | None:intergenic | 30.0% | |
| CAATATAGCATAGATGATGT+GGG | - | Chr2:13360328-13360347 | None:intergenic | 30.0% | |
| CAATTCAACCATAAAGTTTG+TGG | - | Chr2:13360613-13360632 | None:intergenic | 30.0% | |
| CATGGCATGTTTAATTCATA+AGG | - | Chr2:13360716-13360735 | None:intergenic | 30.0% | |
| GTGGGGGAATTATTTATTTA+AGG | - | Chr2:13360310-13360329 | None:intergenic | 30.0% | |
| TTGATGTGTTATGCATTCAT+TGG | + | Chr2:13360044-13360063 | MsG0280007310.01.T01:intron | 30.0% | |
| ! | AATTATTGCTGCTTCATCAA+AGG | - | Chr2:13360074-13360093 | None:intergenic | 30.0% |
| ! | ATTTTCATCTACAGTTTGGT+AGG | + | Chr2:13360760-13360779 | MsG0280007310.01.T01:intron | 30.0% |
| ! | GTTTTGTGTGCAATTTCAAA+TGG | - | Chr2:13359946-13359965 | None:intergenic | 30.0% |
| ! | TGGATCATTTAAGGTAAAGT+AGG | + | Chr2:13359900-13359919 | MsG0280007310.01.T01:intron | 30.0% |
| ! | TGTGACTTTTGGATCATTTA+AGG | + | Chr2:13359891-13359910 | MsG0280007310.01.T01:CDS | 30.0% |
| AAACAGCCAATTATACCTTG+GGG | + | Chr2:13360467-13360486 | MsG0280007310.01.T01:CDS | 35.0% | |
| ACAAACAGCCAATTATACCT+TGG | + | Chr2:13360465-13360484 | MsG0280007310.01.T01:CDS | 35.0% | |
| ATATAGCATAGATGATGTGG+GGG | - | Chr2:13360326-13360345 | None:intergenic | 35.0% | |
| ATGTTAGGGTGAAATATTGG+GGG | - | Chr2:13360370-13360389 | None:intergenic | 35.0% | |
| CAAACAGCCAATTATACCTT+GGG | + | Chr2:13360466-13360485 | MsG0280007310.01.T01:CDS | 35.0% | |
| CAGTTGAGTAATCGGAAAAA+GGG | + | Chr2:13359868-13359887 | MsG0280007310.01.T01:CDS | 35.0% | |
| CCAAAAGTCCACAAACTTTA+TGG | + | Chr2:13360602-13360621 | MsG0280007310.01.T01:CDS | 35.0% | |
| GATGAAATTTGACAGTGGAA+AGG | - | Chr2:13360833-13360852 | None:intergenic | 35.0% | |
| GGCATATGACAAAGTTATGA+TGG | + | Chr2:13359843-13359862 | MsG0280007310.01.T01:CDS | 35.0% | |
| TCAGTTGAGTAATCGGAAAA+AGG | + | Chr2:13359867-13359886 | MsG0280007310.01.T01:CDS | 35.0% | |
| TGACAAGCAATAACAAACCT+TGG | - | Chr2:13360494-13360513 | None:intergenic | 35.0% | |
| TTGTACTTCGATGCAATTTC+AGG | + | Chr2:13360941-13360960 | MsG0280007310.01.T01:intron | 35.0% | |
| TTTGTATACGAAGAATTGGG+AGG | + | Chr2:13360154-13360173 | MsG0280007310.01.T01:intron | 35.0% | |
| ! | AAAGTTTGTGGACTTTTGGA+GGG | - | Chr2:13360601-13360620 | None:intergenic | 35.0% |
| ! | CCATAAAGTTTGTGGACTTT+TGG | - | Chr2:13360605-13360624 | None:intergenic | 35.0% |
| ! | TAAAGTTTGTGGACTTTTGG+AGG | - | Chr2:13360602-13360621 | None:intergenic | 35.0% |
| !!! | GACATGTTAGTTTTTGTTGC+TGG | + | Chr2:13360522-13360541 | MsG0280007310.01.T01:intron | 35.0% |
| AAATGATGTGCGCATCAACT+TGG | + | Chr2:13360982-13361001 | MsG0280007310.01.T01:CDS | 40.0% | |
| CCAAGTGGCTGATAATAGAA+TGG | - | Chr2:13360907-13360926 | None:intergenic | 40.0% | |
| CCATTCTATTATCAGCCACT+TGG | + | Chr2:13360904-13360923 | MsG0280007310.01.T01:intron | 40.0% | |
| GTGAAATATTGGGGGGATAT+AGG | - | Chr2:13360362-13360381 | None:intergenic | 40.0% | |
| GTGTGCAATTTCAAATGGAC+AGG | - | Chr2:13359941-13359960 | None:intergenic | 40.0% | |
| TGATGGCTCAGTTGAGTAAT+CGG | + | Chr2:13359860-13359879 | MsG0280007310.01.T01:CDS | 40.0% | |
| TGTTAGGGTGAAATATTGGG+GGG | - | Chr2:13360369-13360388 | None:intergenic | 40.0% | |
| !! | AAGTTTGTGGACTTTTGGAG+GGG | - | Chr2:13360600-13360619 | None:intergenic | 40.0% |
| !! | TTTTGGAGGGGGAAATAACA+TGG | - | Chr2:13360588-13360607 | None:intergenic | 40.0% |
| ATAACAAACCTTGGTCCCCA+AGG | - | Chr2:13360485-13360504 | None:intergenic | 45.0% | |
| CAATTATACCTTGGGGACCA+AGG | + | Chr2:13360474-13360493 | MsG0280007310.01.T01:CDS | 45.0% | |
| CTTGGTCCCCAAGGTATAAT+TGG | - | Chr2:13360476-13360495 | None:intergenic | 45.0% | |
| !! | AGTTTGTGGACTTTTGGAGG+GGG | - | Chr2:13360599-13360618 | None:intergenic | 45.0% |
| !! | CGGAAAAAGGGTGTGACTTT+TGG | + | Chr2:13359880-13359899 | MsG0280007310.01.T01:CDS | 45.0% |
| !! | TGTCATATGCCTTTTCGAGC+TGG | - | Chr2:13359834-13359853 | None:intergenic | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 13359823 | 13361024 | 13359823 | ID=MsG0280007310.01;Name=MsG0280007310.01 |
| Chr2 | mRNA | 13359823 | 13361024 | 13359823 | ID=MsG0280007310.01.T01;Parent=MsG0280007310.01;Name=MsG0280007310.01.T01;_AED=0.48;_eAED=0.63;_QI=0|0.33|0.25|1|0.33|0.5|4|0|90 |
| Chr2 | exon | 13359823 | 13359912 | 13359823 | ID=MsG0280007310.01.T01:exon:2511;Parent=MsG0280007310.01.T01 |
| Chr2 | exon | 13360440 | 13360495 | 13360440 | ID=MsG0280007310.01.T01:exon:2512;Parent=MsG0280007310.01.T01 |
| Chr2 | exon | 13360567 | 13360631 | 13360567 | ID=MsG0280007310.01.T01:exon:2513;Parent=MsG0280007310.01.T01 |
| Chr2 | exon | 13360963 | 13361024 | 13360963 | ID=MsG0280007310.01.T01:exon:2514;Parent=MsG0280007310.01.T01 |
| Chr2 | CDS | 13359823 | 13359912 | 13359823 | ID=MsG0280007310.01.T01:cds;Parent=MsG0280007310.01.T01 |
| Chr2 | CDS | 13360440 | 13360495 | 13360440 | ID=MsG0280007310.01.T01:cds;Parent=MsG0280007310.01.T01 |
| Chr2 | CDS | 13360567 | 13360631 | 13360567 | ID=MsG0280007310.01.T01:cds;Parent=MsG0280007310.01.T01 |
| Chr2 | CDS | 13360963 | 13361024 | 13360963 | ID=MsG0280007310.01.T01:cds;Parent=MsG0280007310.01.T01 |
| Gene Sequence |
| Protein sequence |
