AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015930.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015930.01.T01 MTR_3g080040 97.753 267 6 0 1 267 1 267 0.0 538
MsG0380015930.01.T01 MTR_8g062340 40.078 257 146 4 1 250 1 256 1.23e-58 189
MsG0380015930.01.T01 MTR_8g062340 40.078 257 146 4 1 250 1 256 1.01e-57 188
MsG0380015930.01.T01 MTR_5g089950 38.132 257 151 4 1 250 1 256 2.41e-56 182
MsG0380015930.01.T01 MTR_1g100240 28.723 188 129 3 6 191 61 245 7.84e-19 85.5
MsG0380015930.01.T02 MTR_3g080040 97.753 267 6 0 1 267 1 267 0.0 538
MsG0380015930.01.T02 MTR_8g062340 40.078 257 146 4 1 250 1 256 1.23e-58 189
MsG0380015930.01.T02 MTR_8g062340 40.078 257 146 4 1 250 1 256 1.01e-57 188
MsG0380015930.01.T02 MTR_5g089950 38.132 257 151 4 1 250 1 256 2.41e-56 182
MsG0380015930.01.T02 MTR_1g100240 28.723 188 129 3 6 191 61 245 7.84e-19 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015930.01.T01 AT4G12790 76.448 259 61 0 1 259 1 259 1.27e-155 434
MsG0380015930.01.T01 AT4G12790 76.448 259 61 0 1 259 1 259 1.27e-155 434
MsG0380015930.01.T01 AT4G12790 76.448 259 61 0 1 259 1 259 1.27e-155 434
MsG0380015930.01.T01 AT4G12790 76.448 259 61 0 1 259 1 259 1.27e-155 434
MsG0380015930.01.T01 AT4G12790 76.448 259 61 0 1 259 1 259 1.27e-155 434
MsG0380015930.01.T01 AT4G12790 76.448 259 61 0 1 259 1 259 1.27e-155 434
MsG0380015930.01.T01 AT5G22370 39.850 266 149 5 1 256 1 265 1.56e-53 176
MsG0380015930.01.T01 AT5G22370 39.850 266 149 5 1 256 1 265 1.56e-53 176
MsG0380015930.01.T01 AT5G22370 39.850 266 149 5 1 256 1 265 1.56e-53 176
MsG0380015930.01.T01 AT4G21800 28.723 188 129 3 6 191 45 229 7.02e-18 82.8
MsG0380015930.01.T01 AT4G21800 28.723 188 129 3 6 191 45 229 7.02e-18 82.8
MsG0380015930.01.T02 AT4G12790 76.448 259 61 0 1 259 1 259 1.27e-155 434
MsG0380015930.01.T02 AT4G12790 76.448 259 61 0 1 259 1 259 1.27e-155 434
MsG0380015930.01.T02 AT4G12790 76.448 259 61 0 1 259 1 259 1.27e-155 434
MsG0380015930.01.T02 AT4G12790 76.448 259 61 0 1 259 1 259 1.27e-155 434
MsG0380015930.01.T02 AT4G12790 76.448 259 61 0 1 259 1 259 1.27e-155 434
MsG0380015930.01.T02 AT4G12790 76.448 259 61 0 1 259 1 259 1.27e-155 434
MsG0380015930.01.T02 AT5G22370 39.850 266 149 5 1 256 1 265 1.56e-53 176
MsG0380015930.01.T02 AT5G22370 39.850 266 149 5 1 256 1 265 1.56e-53 176
MsG0380015930.01.T02 AT5G22370 39.850 266 149 5 1 256 1 265 1.56e-53 176
MsG0380015930.01.T02 AT4G21800 28.723 188 129 3 6 191 45 229 7.02e-18 82.8
MsG0380015930.01.T02 AT4G21800 28.723 188 129 3 6 191 45 229 7.02e-18 82.8

Find 36 sgRNAs with CRISPR-Local

Find 544 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTAATGGGGAGATGATTT+TGG 0.161149 3:-76784561 MsG0380015930.01.T01:three_prime_UTR
CAGCCTTCACAATGACTTAA+TGG 0.204894 3:-76784678 MsG0380015930.01.T01:three_prime_UTR
CTATGGTTCTTAAATTTAAC+AGG 0.261641 3:-76784256 MsG0380015930.01.T01:intron
AATTTAACAGGCTATATCTT+TGG 0.287860 3:-76784244 MsG0380015930.01.T01:intron
TAGAAAATTTAGCCTCCTAA+TGG 0.304775 3:-76784575 MsG0380015930.01.T01:three_prime_UTR
CTTACTCCGCTCCAACTCTT+TGG 0.308563 3:+76784365 None:intergenic
AGGAGATTCACTTATGTCTA+TGG 0.332663 3:-76784316 MsG0380015930.01.T01:intron
TAGAATGTTCAGTGTGGATT+GGG 0.347556 3:-76784611 MsG0380015930.01.T01:three_prime_UTR
AGAAAATTTAGCCTCCTAAT+GGG 0.347926 3:-76784574 MsG0380015930.01.T01:three_prime_UTR
ATGGCAAATTCTAAAACCTT+TGG 0.354523 3:-76784448 MsG0380015930.01.T01:three_prime_UTR
TTCCCTTCCGCAGCAATGTT+TGG 0.360779 3:-76784715 MsG0380015930.01.T01:three_prime_UTR
AAGTTGTGATGTTAAGTTCC+AGG 0.380886 3:+76784281 None:intergenic
AAGATGCAGATGTGAAGGTT+AGG 0.392889 3:-76784769 MsG0380015930.01.T01:CDS
CCCAAAATCATCTCCCCATT+AGG 0.399925 3:+76784560 None:intergenic
AGATGCAGATGTGAAGGTTA+GGG 0.402610 3:-76784768 MsG0380015930.01.T01:CDS
ATTGACAACTGCATTCAGTA+TGG 0.419425 3:-76784794 MsG0380015930.01.T01:CDS
AAAGTAACGATGTCTAAATA+TGG 0.420494 3:+76784485 None:intergenic
TTAACATCACAACTTCACTA+TGG 0.425709 3:-76784273 MsG0380015930.01.T01:intron
CTTCGCAGTCACTGCTTGCT+TGG 0.433136 3:-76784519 MsG0380015930.01.T01:three_prime_UTR
TTACAGTATACAATATGTAT+TGG 0.434380 3:-76784822 MsG0380015930.01.T01:intron
CAAAGAGTTGGAGCGGAGTA+AGG 0.446333 3:-76784364 MsG0380015930.01.T01:intron
ATATTTAGACATCGTTACTT+TGG 0.446787 3:-76784483 MsG0380015930.01.T01:three_prime_UTR
CTATGGCTTTGCTGAAAGCC+TGG 0.472256 3:-76784299 MsG0380015930.01.T01:intron
TTAGAATGTTCAGTGTGGAT+TGG 0.496878 3:-76784612 MsG0380015930.01.T01:three_prime_UTR
AAAATCAATCTTGGATCCAA+AGG 0.513423 3:+76784432 None:intergenic
TGGAGAAGATGCAGATGTGA+AGG 0.524542 3:-76784774 MsG0380015930.01.T01:CDS
ATGCCAAACATTGCTGCGGA+AGG 0.535599 3:+76784712 None:intergenic
ACTTTGGTTACTAATTCTGA+TGG 0.560271 3:-76784467 MsG0380015930.01.T01:three_prime_UTR
GAAAATTTAGCCTCCTAATG+GGG 0.572736 3:-76784573 MsG0380015930.01.T01:three_prime_UTR
TGCCAAACATTGCTGCGGAA+GGG 0.586064 3:+76784713 None:intergenic
AAAATCATCTCCCCATTAGG+AGG 0.586441 3:+76784563 None:intergenic
TTAAATACATAAATCTGTTG+AGG 0.595703 3:-76784336 MsG0380015930.01.T01:intron
TAACCATTAAGTCATTGTGA+AGG 0.623206 3:+76784675 None:intergenic
AGAATGTTCAGTGTGGATTG+GGG 0.625210 3:-76784610 MsG0380015930.01.T01:three_prime_UTR
TATCATGCCAAACATTGCTG+CGG 0.650472 3:+76784708 None:intergenic
TTTCGTTAGAATGTTCAGTG+TGG 0.694311 3:-76784617 MsG0380015930.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATACATTAATTGA+AGG + Chr3:76782765-76782784 None:intergenic 10.0%
!! TGTTCAAAAAAAAAAAAAAA+TGG - Chr3:76790230-76790249 MsG0380015930.01.T01:five_prime_UTR 10.0%
!! TTAAAAATATATTGATCATA+AGG + Chr3:76786392-76786411 None:intergenic 10.0%
!!! AATTGATTATTAAGTTTTTT+TGG - Chr3:76783786-76783805 MsG0380015930.01.T01:intron 10.0%
!!! ACTCTATTTTTTAAAAAAAA+TGG + Chr3:76784711-76784730 None:intergenic 10.0%
!!! TTTTAATTAAACAAATGAAA+AGG + Chr3:76783342-76783361 None:intergenic 10.0%
!! ACATCATTAAAAATATGAAA+AGG + Chr3:76785298-76785317 None:intergenic 15.0%
!! ACTGAAATATTAAAATTGAA+TGG - Chr3:76785397-76785416 MsG0380015930.01.T01:intron 15.0%
!! ATAATACATATATTAGAATC+CGG + Chr3:76784280-76784299 None:intergenic 15.0%
!! CAAAATATCATAACAAAAAA+AGG + Chr3:76784637-76784656 None:intergenic 15.0%
!! TAAAAAAGGGAAAAATATAT+CGG + Chr3:76784746-76784765 None:intergenic 15.0%
!! TCAAAAAAAAAAATCAATCT+TGG + Chr3:76787564-76787583 None:intergenic 15.0%
!! TTACAATTGAAAGAAAAAAA+TGG + Chr3:76786004-76786023 None:intergenic 15.0%
!! TTTGTTTATAAATCTATTGT+TGG - Chr3:76784938-76784957 MsG0380015930.01.T01:intron 15.0%
!!! ACATACTATTTTGATAAATT+AGG - Chr3:76788209-76788228 MsG0380015930.01.T01:intron 15.0%
!!! ATTTATTTATTTCTTTCACT+CGG - Chr3:76788952-76788971 MsG0380015930.01.T01:intron 15.0%
!!! ATTTTAATAGAATTAACCTT+AGG + Chr3:76783769-76783788 None:intergenic 15.0%
!!! CTTTTTTTGTTATGATATTT+TGG - Chr3:76784635-76784654 MsG0380015930.01.T01:three_prime_UTR 15.0%
!!! GTATTTTTTTTTTCTTCTAA+TGG - Chr3:76782774-76782793 MsG0380015930.01.T01:intron 15.0%
!!! TGTTGTATTGTTATTATATA+AGG - Chr3:76785315-76785334 MsG0380015930.01.T01:intron 15.0%
!!! TTAATTTTGTTTTTGTTGAT+TGG - Chr3:76781896-76781915 MsG0380015930.01.T01:intron 15.0%
!!! TTCATTCTTTCTATATATTT+TGG - Chr3:76785584-76785603 MsG0380015930.01.T01:intron 15.0%
!!! TTTATTACAAAACTGAATTT+TGG - Chr3:76789569-76789588 MsG0380015930.01.T01:intron 15.0%
!! AAAATAAACAACACCAAAAT+TGG + Chr3:76789239-76789258 None:intergenic 20.0%
!! AATTTATGAAAATGCCATTA+TGG + Chr3:76786966-76786985 None:intergenic 20.0%
!! AGAGTTATGAAAATATTGAA+AGG - Chr3:76786417-76786436 MsG0380015930.01.T01:intron 20.0%
!! ATCACTAAATTATCATACTT+TGG - Chr3:76788090-76788109 MsG0380015930.01.T01:CDS 20.0%
!! ATCTAATAAAAACTAGCAAA+TGG + Chr3:76786690-76786709 None:intergenic 20.0%
!! ATGAAAATATTGAAAGGATT+TGG - Chr3:76786423-76786442 MsG0380015930.01.T01:intron 20.0%
!! GAAAACATTTAACATGTTAT+AGG + Chr3:76782522-76782541 None:intergenic 20.0%
!! TACTATCTGAATTGAATAAA+CGG - Chr3:76784341-76784360 MsG0380015930.01.T01:intron 20.0%
!! TATTATCATAAGCTCAAAAT+AGG + Chr3:76788826-76788845 None:intergenic 20.0%
!! TCTATTCTTAAAATAGTCAT+AGG + Chr3:76784420-76784439 None:intergenic 20.0%
!! TTAAATACATAAATCTGTTG+AGG - Chr3:76787648-76787667 MsG0380015930.01.T01:CDS 20.0%
!! TTACAGTATACAATATGTAT+TGG - Chr3:76787162-76787181 MsG0380015930.01.T01:intron 20.0%
!!! ACAATTTTCAAAAGCTTTTA+TGG - Chr3:76782318-76782337 MsG0380015930.01.T01:intron 20.0%
!!! ACTATCTAAACGTTTAATTT+AGG + Chr3:76783005-76783024 None:intergenic 20.0%
!!! ATAAAAGCTTTTGAAAATTG+TGG + Chr3:76782319-76782338 None:intergenic 20.0%
!!! ATTAAGTTGAACTCAAATTA+TGG - Chr3:76785464-76785483 MsG0380015930.01.T01:intron 20.0%
!!! ATTTGTTAAATATATCCCAA+TGG + Chr3:76788456-76788475 None:intergenic 20.0%
!!! CATTTCTATTTTACTAATGT+TGG - Chr3:76790121-76790140 MsG0380015930.01.T01:intron 20.0%
!!! CTAAATTTTCTAAATCATCA+AGG + Chr3:76787401-76787420 None:intergenic 20.0%
!!! CTATCTAAACGTTTAATTTA+GGG + Chr3:76783004-76783023 None:intergenic 20.0%
!!! TATATCTTTCAAACTTTTGT+GGG - Chr3:76786226-76786245 MsG0380015930.01.T01:intron 20.0%
!!! TCAAATCAGTCATATTTTAT+TGG + Chr3:76785553-76785572 None:intergenic 20.0%
!!! TCACTTTGTTACTATAATTT+TGG - Chr3:76789285-76789304 MsG0380015930.01.T01:intron 20.0%
!!! TCTGTTTTTAGTGAAATTAA+CGG - Chr3:76783372-76783391 MsG0380015930.01.T01:intron 20.0%
!!! TTATATCTTTCAAACTTTTG+TGG - Chr3:76786225-76786244 MsG0380015930.01.T01:intron 20.0%
!!! TTATTAGATAAACACGTTTT+GGG - Chr3:76786701-76786720 MsG0380015930.01.T01:intron 20.0%
!!! TTATTCCATAATATCCTTTT+TGG + Chr3:76789483-76789502 None:intergenic 20.0%
!!! TTATTTTTGAGAAAAGAGAA+TGG - Chr3:76786814-76786833 MsG0380015930.01.T01:intron 20.0%
!!! TTCATTTTGTTGGTTTTTAT+AGG - Chr3:76784471-76784490 MsG0380015930.01.T01:three_prime_UTR 20.0%
!!! TTGTTTTTAATGAAAAAGCA+TGG - Chr3:76785436-76785455 MsG0380015930.01.T01:intron 20.0%
!!! TTTATTAGATAAACACGTTT+TGG - Chr3:76786700-76786719 MsG0380015930.01.T01:intron 20.0%
!!! TTTTAAAATATTGCAGTTCA+TGG - Chr3:76784076-76784095 MsG0380015930.01.T01:intron 20.0%
!!! TTTTGAAAATTTGTTGAAGT+GGG - Chr3:76787578-76787597 MsG0380015930.01.T01:intron 20.0%
!!! TTTTTGAAAATTTGTTGAAG+TGG - Chr3:76787577-76787596 MsG0380015930.01.T01:intron 20.0%
! AAAAAATCTATTGCACTCTT+AGG + Chr3:76786665-76786684 None:intergenic 25.0%
! AAAGTAACGATGTCTAAATA+TGG + Chr3:76787502-76787521 None:intergenic 25.0%
! AAATAAGTCAATTCAAACGA+AGG + Chr3:76782141-76782160 None:intergenic 25.0%
! AAATCTTTATGTCCTTAAGA+AGG - Chr3:76788585-76788604 MsG0380015930.01.T01:intron 25.0%
! AAATTGAAGTCATATGCAAA+TGG + Chr3:76785067-76785086 None:intergenic 25.0%
! AACAAAATTTCAACAGCATA+TGG + Chr3:76783413-76783432 None:intergenic 25.0%
! AATTGAAGTCATATGCAAAT+GGG + Chr3:76785066-76785085 None:intergenic 25.0%
! AATTTAACAGGCTATATCTT+TGG - Chr3:76787740-76787759 MsG0380015930.01.T01:intron 25.0%
! ACAAAAATATGCATGTTGAT+CGG + Chr3:76784923-76784942 None:intergenic 25.0%
! ACAATCCAAAAAGGATATTA+TGG - Chr3:76789475-76789494 MsG0380015930.01.T01:intron 25.0%
! ACTTTACAATATTACTGACA+AGG + Chr3:76784446-76784465 None:intergenic 25.0%
! AGATAACAAGACAACAATAA+TGG + Chr3:76784042-76784061 None:intergenic 25.0%
! AGTTGTACTTATAAGGTATA+TGG - Chr3:76786193-76786212 MsG0380015930.01.T01:intron 25.0%
! ATAAACACGATTAATATGAC+TGG - Chr3:76789044-76789063 MsG0380015930.01.T01:intron 25.0%
! ATATTTAACAAATCGATGTC+AGG - Chr3:76788463-76788482 MsG0380015930.01.T01:intron 25.0%
! ATATTTAGACATCGTTACTT+TGG - Chr3:76787501-76787520 MsG0380015930.01.T01:intron 25.0%
! ATTCAATTCAGATAGTAGAA+AGG + Chr3:76784338-76784357 None:intergenic 25.0%
! ATTTGCATATGACTTCAATT+TGG - Chr3:76785066-76785085 MsG0380015930.01.T01:intron 25.0%
! CATTAATTGAAGGATAGTTT+AGG + Chr3:76782755-76782774 None:intergenic 25.0%
! CCTCAAAGATCTTTATTATT+GGG - Chr3:76786095-76786114 MsG0380015930.01.T01:intron 25.0%
! CTATGGTTCTTAAATTTAAC+AGG - Chr3:76787728-76787747 MsG0380015930.01.T01:intron 25.0%
! CTGGAATACAAAAAAATTGA+TGG - Chr3:76782677-76782696 MsG0380015930.01.T01:intron 25.0%
! CTTTACAATATTACTGACAA+GGG + Chr3:76784445-76784464 None:intergenic 25.0%
! GAAAATAAATCAAGAACAAG+TGG + Chr3:76786852-76786871 None:intergenic 25.0%
! GAATAAATCTTTGATTGATG+TGG - Chr3:76784387-76784406 MsG0380015930.01.T01:three_prime_UTR 25.0%
! GACAATATAAAAGTTTCAGT+TGG + Chr3:76787776-76787795 None:intergenic 25.0%
! GGAATAAATAAATAAGCTGA+TGG + Chr3:76785171-76785190 None:intergenic 25.0%
! GGAGAGTTCATAAAAAAAAA+AGG + Chr3:76782547-76782566 None:intergenic 25.0%
! GTGTCTAAACATGATTATTA+AGG + Chr3:76783437-76783456 None:intergenic 25.0%
! TAAATTAATGCCGAGTATTA+TGG - Chr3:76787818-76787837 MsG0380015930.01.T01:CDS 25.0%
! TAAGGACATAAAGATTTCTA+TGG + Chr3:76788582-76788601 None:intergenic 25.0%
! TATTATTCATAAGCTAGTCA+AGG + Chr3:76788925-76788944 None:intergenic 25.0%
! TCAAATGTTCAACAAAATTC+CGG + Chr3:76783884-76783903 None:intergenic 25.0%
! TCCTCAAAGATCTTTATTAT+TGG - Chr3:76786094-76786113 MsG0380015930.01.T01:intron 25.0%
! TCTACAAAAACACTCAAATA+AGG + Chr3:76786354-76786373 None:intergenic 25.0%
! TGTATTCTTCATAACTTTGA+GGG - Chr3:76782825-76782844 MsG0380015930.01.T01:intron 25.0%
! TGTCAATATTCTCTCAAAAA+TGG - Chr3:76784169-76784188 MsG0380015930.01.T01:intron 25.0%
! TTGTATTCTTCATAACTTTG+AGG - Chr3:76782824-76782843 MsG0380015930.01.T01:intron 25.0%
! TTTACAATATTACTGACAAG+GGG + Chr3:76784444-76784463 None:intergenic 25.0%
!! AAAACAAAAGCCAATTTGTT+TGG + Chr3:76787117-76787136 None:intergenic 25.0%
!! AAAATGTTGTAATGTTTTGC+AGG - Chr3:76783825-76783844 MsG0380015930.01.T01:intron 25.0%
!! AAACAAAAGCCAATTTGTTT+GGG + Chr3:76787116-76787135 None:intergenic 25.0%
!! AAAGTATGCATTCATTTTGT+TGG - Chr3:76784461-76784480 MsG0380015930.01.T01:three_prime_UTR 25.0%
!! AAATGTTGTAATGTTTTGCA+GGG - Chr3:76783826-76783845 MsG0380015930.01.T01:intron 25.0%
!! AACAATAATGGAAAGTCTAA+AGG + Chr3:76784030-76784049 None:intergenic 25.0%
!! ACTATTTTCAAAGAGCTAAA+AGG - Chr3:76788135-76788154 MsG0380015930.01.T01:CDS 25.0%
!! ACTGAAACTTTTATATTGTC+AGG - Chr3:76787776-76787795 MsG0380015930.01.T01:intron 25.0%
!! AGGAACTAAAAAAAAAGCAT+TGG + Chr3:76786466-76786485 None:intergenic 25.0%
!! TAAACGTTTAATTTAGGGAA+GGG + Chr3:76782999-76783018 None:intergenic 25.0%
!! TGTAACAATCTTGTTCTAAA+AGG + Chr3:76783730-76783749 None:intergenic 25.0%
!! TTATTTATTCCTTTTGCAAC+AGG - Chr3:76785180-76785199 MsG0380015930.01.T01:intron 25.0%
!! TTGTTTTCTCTTAAAATACG+TGG - Chr3:76785016-76785035 MsG0380015930.01.T01:intron 25.0%
!! TTTAGAACAAGATTGTTACA+GGG - Chr3:76783730-76783749 MsG0380015930.01.T01:intron 25.0%
!! TTTCGACTACTTTATTTATC+CGG - Chr3:76784258-76784277 MsG0380015930.01.T01:intron 25.0%
!!! AAGTTGGTTTTTATAGAGAA+TGG - Chr3:76784534-76784553 MsG0380015930.01.T01:three_prime_UTR 25.0%
!!! AATTTTTTTGTATTCCAGAC+TGG + Chr3:76782675-76782694 None:intergenic 25.0%
!!! AGCAGTTCTTTTTACTTTTT+AGG - Chr3:76785925-76785944 MsG0380015930.01.T01:intron 25.0%
!!! ATCTTTGAGGATTTCTTTTT+AGG + Chr3:76786085-76786104 None:intergenic 25.0%
!!! CCTAACCTAAATTTGTTAAT+GGG - Chr3:76785778-76785797 MsG0380015930.01.T01:intron 25.0%
!!! CTAAATGACATTTTTCAAGA+GGG - Chr3:76788495-76788514 MsG0380015930.01.T01:CDS 25.0%
!!! GCTATTTTCATAAGCTATAT+AGG + Chr3:76782362-76782381 None:intergenic 25.0%
!!! TAATGGAGCTTAACTTTTTT+CGG - Chr3:76783215-76783234 MsG0380015930.01.T01:intron 25.0%
!!! TCTAAATGACATTTTTCAAG+AGG - Chr3:76788494-76788513 MsG0380015930.01.T01:CDS 25.0%
!!! TTGTTTTTTATCCAAAGAGT+TGG - Chr3:76787608-76787627 MsG0380015930.01.T01:CDS 25.0%
!!! TTTGATTCTGAAATATGGTT+AGG - Chr3:76789926-76789945 MsG0380015930.01.T01:intron 25.0%
!!! TTTTAGAACAAGATTGTTAC+AGG - Chr3:76783729-76783748 MsG0380015930.01.T01:intron 25.0%
!!! TTTTTTAGTTCCTCATACTA+AGG - Chr3:76786473-76786492 MsG0380015930.01.T01:intron 25.0%
!!! TTTTTTTTTATGAACTCTCC+AGG - Chr3:76782547-76782566 MsG0380015930.01.T01:intron 25.0%
AAAAAAAGGAAAATCACCCT+TGG + Chr3:76784623-76784642 None:intergenic 30.0%
AAAATCAATCTTGGATCCAA+AGG + Chr3:76787555-76787574 None:intergenic 30.0%
AAACAAAAGTTGCAAAACTG+CGG + Chr3:76783968-76783987 None:intergenic 30.0%
AAACAAACAACTCATCACAA+TGG - Chr3:76782060-76782079 MsG0380015930.01.T01:intron 30.0%
AAATCTTTGATTGATGTGGT+GGG - Chr3:76784391-76784410 MsG0380015930.01.T01:three_prime_UTR 30.0%
AACAAACAACTCATCACAAT+GGG - Chr3:76782061-76782080 MsG0380015930.01.T01:intron 30.0%
AACATGTTATAGGTCATGTT+TGG + Chr3:76782512-76782531 None:intergenic 30.0%
AAGAAACAAACATGAATACC+AGG + Chr3:76783538-76783557 None:intergenic 30.0%
AATTCAGATAGTAGAAAGGT+GGG + Chr3:76784334-76784353 None:intergenic 30.0%
ACAGGTAAGTAGTTATAACA+TGG - Chr3:76785198-76785217 MsG0380015930.01.T01:intron 30.0%
ACTCTCAAAATTGCAATCTT+TGG + Chr3:76783597-76783616 None:intergenic 30.0%
ACTTATAAGGTATATGGCTT+GGG - Chr3:76786199-76786218 MsG0380015930.01.T01:intron 30.0%
ACTTGTGTCAGTCATAAAAA+AGG + Chr3:76784760-76784779 None:intergenic 30.0%
ACTTTGGTTACTAATTCTGA+TGG - Chr3:76787517-76787536 MsG0380015930.01.T01:intron 30.0%
AGAAAATTTAGCCTCCTAAT+GGG - Chr3:76787410-76787429 MsG0380015930.01.T01:intron 30.0%
AGAAACAAACATGAATACCA+GGG + Chr3:76783537-76783556 None:intergenic 30.0%
AGAAAGAGAAGCAAATAAGT+TGG + Chr3:76781800-76781819 None:intergenic 30.0%
AGATGATATGATTAGGAGTT+AGG - Chr3:76789385-76789404 MsG0380015930.01.T01:intron 30.0%
AGGACAAATATTAGACTAAG+CGG + Chr3:76783710-76783729 None:intergenic 30.0%
AGTAAACATGGTTAATGCTT+GGG - Chr3:76788752-76788771 MsG0380015930.01.T01:intron 30.0%
AGTCAAAAGAGATATTGAAG+GGG - Chr3:76786059-76786078 MsG0380015930.01.T01:intron 30.0%
ATAGTATTGCAAACACATCA+AGG + Chr3:76782975-76782994 None:intergenic 30.0%
ATAGTCCTACAAACTTGAAT+AGG + Chr3:76786526-76786545 None:intergenic 30.0%
ATCTGAATTGAATAAACGGA+TGG - Chr3:76784345-76784364 MsG0380015930.01.T01:intron 30.0%
ATGATATGAAATAGCCAGAT+TGG - Chr3:76788297-76788316 MsG0380015930.01.T01:intron 30.0%
ATGGCTAAGTTGTACTTATA+AGG - Chr3:76786186-76786205 MsG0380015930.01.T01:intron 30.0%
CAAAAACACTCAAATAAGGA+AGG + Chr3:76786350-76786369 None:intergenic 30.0%
CAAATTTATAAGTGGATGCA+TGG - Chr3:76784109-76784128 MsG0380015930.01.T01:intron 30.0%
CAGTCAAAAGAGATATTGAA+GGG - Chr3:76786058-76786077 MsG0380015930.01.T01:intron 30.0%
CATGCATCCACTTATAAATT+TGG + Chr3:76784111-76784130 None:intergenic 30.0%
CATTTCTTTGGATGATGTTA+TGG - Chr3:76783266-76783285 MsG0380015930.01.T01:intron 30.0%
CCCAATAATAAAGATCTTTG+AGG + Chr3:76786098-76786117 None:intergenic 30.0%
CTAGTAGTACTATACCATAT+AGG - Chr3:76789954-76789973 MsG0380015930.01.T01:five_prime_UTR 30.0%
CTTGTGTCAGTCATAAAAAA+GGG + Chr3:76784759-76784778 None:intergenic 30.0%
CTTTAAGTCCCCTAAAAATT+CGG - Chr3:76785961-76785980 MsG0380015930.01.T01:intron 30.0%
GATGTGACCAAATTTATAAG+TGG - Chr3:76784101-76784120 MsG0380015930.01.T01:intron 30.0%
GTTAAATATATCCCAATGGA+AGG + Chr3:76788452-76788471 None:intergenic 30.0%
TAAATCTTTGATTGATGTGG+TGG - Chr3:76784390-76784409 MsG0380015930.01.T01:three_prime_UTR 30.0%
TAACCATTAAGTCATTGTGA+AGG + Chr3:76787312-76787331 None:intergenic 30.0%
TACAAAATCTCCTTAGTATG+AGG + Chr3:76786486-76786505 None:intergenic 30.0%
TACTTATAAGGTATATGGCT+TGG - Chr3:76786198-76786217 MsG0380015930.01.T01:intron 30.0%
TAGAAAATTTAGCCTCCTAA+TGG - Chr3:76787409-76787428 MsG0380015930.01.T01:intron 30.0%
TATACTGCTATAAGTTCAAG+TGG + Chr3:76789027-76789046 None:intergenic 30.0%
TATGAGTTTACATGTAGTGT+TGG + Chr3:76789863-76789882 None:intergenic 30.0%
TCAAAGGATTGAATTTGCAA+AGG - Chr3:76785527-76785546 MsG0380015930.01.T01:intron 30.0%
TCAAGGATATCCATAATACT+CGG + Chr3:76787831-76787850 None:intergenic 30.0%
TCAGCAACAAAAAAGTAACA+TGG - Chr3:76787956-76787975 MsG0380015930.01.T01:intron 30.0%
TCAGTCAAAAGAGATATTGA+AGG - Chr3:76786057-76786076 MsG0380015930.01.T01:intron 30.0%
TCGTAGACATTAGTTAAGTT+AGG - Chr3:76785126-76785145 MsG0380015930.01.T01:intron 30.0%
TGAATTGAGTACGATAATCA+TGG + Chr3:76788707-76788726 None:intergenic 30.0%
TGCTTATATACAAGACTAGA+GGG - Chr3:76782898-76782917 MsG0380015930.01.T01:intron 30.0%
TGGGTTTATGTTCGTTAATT+TGG - Chr3:76786886-76786905 MsG0380015930.01.T01:intron 30.0%
TGTTCTTTCCTTCACTAAAA+TGG - Chr3:76790002-76790021 MsG0380015930.01.T01:five_prime_UTR 30.0%
TTAACATCACAACTTCACTA+TGG - Chr3:76787711-76787730 MsG0380015930.01.T01:intron 30.0%
TTACAATATTACTGACAAGG+GGG + Chr3:76784443-76784462 None:intergenic 30.0%
TTATTCAACTTTGCATACTG+AGG + Chr3:76784373-76784392 None:intergenic 30.0%
TTCATAATGTGAGCACAATT+AGG - Chr3:76789679-76789698 MsG0380015930.01.T01:intron 30.0%
TTCCTTGTAGTTTAGTACTT+TGG - Chr3:76785663-76785682 MsG0380015930.01.T01:intron 30.0%
TTGAGAGAATATTGACATGA+GGG + Chr3:76784166-76784185 None:intergenic 30.0%
TTGCTACAGATGATATGATT+AGG - Chr3:76789378-76789397 MsG0380015930.01.T01:intron 30.0%
TTGCTTATATACAAGACTAG+AGG - Chr3:76782897-76782916 MsG0380015930.01.T01:intron 30.0%
TTTAAGTCCCCTAAAAATTC+GGG - Chr3:76785962-76785981 MsG0380015930.01.T01:intron 30.0%
TTTCTCTTAAAATACGTGGA+AGG - Chr3:76785020-76785039 MsG0380015930.01.T01:intron 30.0%
TTTCTTCTAATGGAACAAGT+GGG - Chr3:76782784-76782803 MsG0380015930.01.T01:intron 30.0%
TTTGAGAGAATATTGACATG+AGG + Chr3:76784167-76784186 None:intergenic 30.0%
! AACTGTTCATTGATTGTCAA+TGG + Chr3:76784501-76784520 None:intergenic 30.0%
! AAGCCTTAGTATTTGAAACT+TGG + Chr3:76786263-76786282 None:intergenic 30.0%
! ACACCAACTAATTTTCTCAA+AGG - Chr3:76782857-76782876 MsG0380015930.01.T01:intron 30.0%
! AGCCTTAGTATTTGAAACTT+GGG + Chr3:76786262-76786281 None:intergenic 30.0%
! AGGAACTTATGGATTGAAAA+TGG - Chr3:76782201-76782220 MsG0380015930.01.T01:intron 30.0%
! AGTTATCTCCCGAATTTTTA+GGG + Chr3:76785973-76785992 None:intergenic 30.0%
! ATGGATTGAAAATGGCTTAT+GGG - Chr3:76782209-76782228 MsG0380015930.01.T01:intron 30.0%
! ATTTTCCTGCCATAATTATG+TGG - Chr3:76784895-76784914 MsG0380015930.01.T01:intron 30.0%
! CACCAACTAATTTTCTCAAA+GGG - Chr3:76782858-76782877 MsG0380015930.01.T01:intron 30.0%
! CCCATTAACAAATTTAGGTT+AGG + Chr3:76785781-76785800 None:intergenic 30.0%
! CTAAACGTTTAATTTAGGGA+AGG + Chr3:76783000-76783019 None:intergenic 30.0%
! GCGGTAATTTTATTATGCTA+CGG + Chr3:76783691-76783710 None:intergenic 30.0%
! TATGGATTGAAAATGGCTTA+TGG - Chr3:76782208-76782227 MsG0380015930.01.T01:intron 30.0%
! TCACTAGTTGAATCCAATTT+TGG - Chr3:76789223-76789242 MsG0380015930.01.T01:intron 30.0%
! TCATTTGGGACTTTGTTTAA+TGG - Chr3:76783198-76783217 MsG0380015930.01.T01:intron 30.0%
! TGACAATCAATGAACAGTTT+TGG - Chr3:76784502-76784521 MsG0380015930.01.T01:three_prime_UTR 30.0%
! TGTTTAAAGTTCTGTGTTGT+CGG - Chr3:76785836-76785855 MsG0380015930.01.T01:intron 30.0%
! TTGAGAGTTGTGTTACTATA+AGG - Chr3:76783609-76783628 MsG0380015930.01.T01:intron 30.0%
! TTTGAACTTGATAACCAATC+TGG + Chr3:76788314-76788333 None:intergenic 30.0%
! TTTTAGTGAAGGAAAGAACA+GGG + Chr3:76790002-76790021 None:intergenic 30.0%
! TTTTCTTCTAATGGAACAAG+TGG - Chr3:76782783-76782802 MsG0380015930.01.T01:intron 30.0%
!! AAAGCATTGGAGAAAGATAT+CGG + Chr3:76786453-76786472 None:intergenic 30.0%
!! ATGGCAAATTCTAAAACCTT+TGG - Chr3:76787536-76787555 MsG0380015930.01.T01:intron 30.0%
!! ATTTTAGTGAAGGAAAGAAC+AGG + Chr3:76790003-76790022 None:intergenic 30.0%
!! CAAATACTAAGGCTTTGTTT+GGG - Chr3:76786268-76786287 MsG0380015930.01.T01:intron 30.0%
!! GCCTAACCTAAATTTGTTAA+TGG - Chr3:76785777-76785796 MsG0380015930.01.T01:intron 30.0%
!! TCAAATACTAAGGCTTTGTT+TGG - Chr3:76786267-76786286 MsG0380015930.01.T01:intron 30.0%
!! TTAGGGATTTTGATGAAGAT+GGG - Chr3:76787233-76787252 MsG0380015930.01.T01:intron 30.0%
!! TTGGGTTTGATTCTGAAATA+TGG - Chr3:76789921-76789940 MsG0380015930.01.T01:intron 30.0%
!!! TAAGTTTTTTTGGTTGCAAC+TGG - Chr3:76783796-76783815 MsG0380015930.01.T01:intron 30.0%
!!! TTTTTTTGCTCCTAGATTCT+TGG - Chr3:76784300-76784319 MsG0380015930.01.T01:intron 30.0%
AACTACTTACCTGTTGCAAA+AGG + Chr3:76785192-76785211 None:intergenic 35.0%
AAGTGTTTCATATCAAGCCT+TGG + Chr3:76788615-76788634 None:intergenic 35.0%
AAGTTGAACCATTGCAGAAA+GGG + Chr3:76784138-76784157 None:intergenic 35.0%
AAGTTGTGATGTTAAGTTCC+AGG + Chr3:76787706-76787725 None:intergenic 35.0%
AATTTGACCCATCCTCAAAA+TGG - Chr3:76790064-76790083 MsG0380015930.01.T01:five_prime_UTR 35.0%
ACTAAAGATGAGAAGCTTCA+CGG + Chr3:76784821-76784840 None:intergenic 35.0%
AGAACTTTATTCACATGTGC+CGG - Chr3:76783854-76783873 MsG0380015930.01.T01:intron 35.0%
AGGAGATTCACTTATGTCTA+TGG - Chr3:76787668-76787687 MsG0380015930.01.T01:CDS 35.0%
AGGATCAGTTATCTATTGGT+AGG - Chr3:76789349-76789368 MsG0380015930.01.T01:intron 35.0%
AGTTAGAATGACTCGAATTG+TGG + Chr3:76788419-76788438 None:intergenic 35.0%
ATAGTCCCACAAACTTGAAT+AGG + Chr3:76786583-76786602 None:intergenic 35.0%
ATCAAACTCATCTGCTTTGA+TGG + Chr3:76788360-76788379 None:intergenic 35.0%
ATCAGCAGTAAGGGAATAAT+CGG + Chr3:76785103-76785122 None:intergenic 35.0%
ATTGACAACTGCATTCAGTA+TGG - Chr3:76787190-76787209 MsG0380015930.01.T01:intron 35.0%
ATTTGACCCATCCTCAAAAT+GGG - Chr3:76790065-76790084 MsG0380015930.01.T01:five_prime_UTR 35.0%
CAATTCAGATAGTAGAAAGG+TGG + Chr3:76784335-76784354 None:intergenic 35.0%
CACAAAACTAAAGATGATCG+AGG + Chr3:76781875-76781894 None:intergenic 35.0%
CACACAAAGTGACTTATATG+TGG + Chr3:76788553-76788572 None:intergenic 35.0%
CTAGAGCTATGTGAAAATCA+TGG + Chr3:76784684-76784703 None:intergenic 35.0%
CTTAAAATACGTGGAAGGAT+TGG - Chr3:76785025-76785044 MsG0380015930.01.T01:intron 35.0%
CTTCACTAAAATGGAAGCAA+AGG - Chr3:76790011-76790030 MsG0380015930.01.T01:five_prime_UTR 35.0%
GAAAATTTAGCCTCCTAATG+GGG - Chr3:76787411-76787430 MsG0380015930.01.T01:intron 35.0%
GAATTGATGTCTAGTAAGCA+TGG - Chr3:76784571-76784590 MsG0380015930.01.T01:three_prime_UTR 35.0%
GAGCTCTTAAAAAGCCATAA+TGG - Chr3:76786949-76786968 MsG0380015930.01.T01:intron 35.0%
GAGTAAACATGGTTAATGCT+TGG - Chr3:76788751-76788770 MsG0380015930.01.T01:intron 35.0%
GAGTGAGTCAATAGCTTAAA+GGG + Chr3:76784002-76784021 None:intergenic 35.0%
GCAGCTTAAAATACATGTGT+GGG - Chr3:76784960-76784979 MsG0380015930.01.T01:intron 35.0%
GCTATGTGAAAATCATGGTT+AGG + Chr3:76784679-76784698 None:intergenic 35.0%
GTAAACATGGTTAATGCTTG+GGG - Chr3:76788753-76788772 MsG0380015930.01.T01:intron 35.0%
TACATGAAAATCGATTGCGT+AGG - Chr3:76789125-76789144 MsG0380015930.01.T01:intron 35.0%
TACTATACCATATAGGTGCA+GGG - Chr3:76789961-76789980 MsG0380015930.01.T01:five_prime_UTR 35.0%
TAGAATGTTCAGTGTGGATT+GGG - Chr3:76787373-76787392 MsG0380015930.01.T01:intron 35.0%
TAGGAGGATATCTGAATTCA+TGG + Chr3:76786767-76786786 None:intergenic 35.0%
TAGTCCCACAAACTTGAATA+GGG + Chr3:76786582-76786601 None:intergenic 35.0%
TATCAAGTTCAAAGCCAGAT+TGG - Chr3:76788321-76788340 MsG0380015930.01.T01:intron 35.0%
TATGATTAGGAGTTAGGACT+AGG - Chr3:76789391-76789410 MsG0380015930.01.T01:intron 35.0%
TCAACAAAATTCCGGAATAC+CGG + Chr3:76783876-76783895 None:intergenic 35.0%
TCTTTCAATTGTAACACCTC+CGG - Chr3:76786010-76786029 MsG0380015930.01.T01:intron 35.0%
TGAAAGAAAAAAATGGCCTC+CGG + Chr3:76785997-76786016 None:intergenic 35.0%
TGAAGTTTATGACTCGCAAT+TGG + Chr3:76789663-76789682 None:intergenic 35.0%
TGAGTGAGTCAATAGCTTAA+AGG + Chr3:76784003-76784022 None:intergenic 35.0%
TGATCGGTACCACATAATTA+TGG + Chr3:76784907-76784926 None:intergenic 35.0%
TGGAATGTTTGCAGATGTAA+GGG - Chr3:76783239-76783258 MsG0380015930.01.T01:intron 35.0%
TGGACTTGAGGAAAGAAAAA+AGG - Chr3:76785236-76785255 MsG0380015930.01.T01:intron 35.0%
TGGATAGAGACAATCCAAAA+AGG - Chr3:76789466-76789485 MsG0380015930.01.T01:intron 35.0%
TGTAAGGGAACTCATTTCTT+TGG - Chr3:76783254-76783273 MsG0380015930.01.T01:intron 35.0%
TGTGATGAGTTGTTTGTTTC+AGG + Chr3:76782059-76782078 None:intergenic 35.0%
TTAAGTATCATGATGTGCTC+TGG - Chr3:76785616-76785635 MsG0380015930.01.T01:intron 35.0%
TTAGAATGTTCAGTGTGGAT+TGG - Chr3:76787372-76787391 MsG0380015930.01.T01:intron 35.0%
TTATTTGGATGACGAGTACT+TGG - Chr3:76783501-76783520 MsG0380015930.01.T01:intron 35.0%
TTCTTCTAATGGAACAAGTG+GGG - Chr3:76782785-76782804 MsG0380015930.01.T01:intron 35.0%
TTCTTTGGATGATGTTATGG+AGG - Chr3:76783269-76783288 MsG0380015930.01.T01:intron 35.0%
TTGAGATGTTTAGCCAAACA+AGG - Chr3:76782949-76782968 MsG0380015930.01.T01:intron 35.0%
TTGGAATGTTTGCAGATGTA+AGG - Chr3:76783238-76783257 MsG0380015930.01.T01:intron 35.0%
TTTCGTTAGAATGTTCAGTG+TGG - Chr3:76787367-76787386 MsG0380015930.01.T01:intron 35.0%
TTTGACTGAAAAATGCCATC+CGG + Chr3:76786046-76786065 None:intergenic 35.0%
TTTGTCACAAGTGAAGACTA+AGG + Chr3:76787907-76787926 None:intergenic 35.0%
! AACCTCCTATTCAAGTTTGT+AGG - Chr3:76786518-76786537 MsG0380015930.01.T01:intron 35.0%
! AGCCAAAGTACTAAACTACA+AGG + Chr3:76785668-76785687 None:intergenic 35.0%
! ATTTTCAATACGCTTCAGAG+TGG - Chr3:76786866-76786885 MsG0380015930.01.T01:intron 35.0%
! CACCCTTTGAGAAAATTAGT+TGG + Chr3:76782863-76782882 None:intergenic 35.0%
! GAGTTATCTCCCGAATTTTT+AGG + Chr3:76785974-76785993 None:intergenic 35.0%
! GATCCTTTTTGTTAGTCACA+AGG + Chr3:76784196-76784215 None:intergenic 35.0%
! GCATTTGTCCATGCTTTAAA+TGG - Chr3:76785866-76785885 MsG0380015930.01.T01:intron 35.0%
! GTTTAAAGTTCTGTGTTGTC+GGG - Chr3:76785837-76785856 MsG0380015930.01.T01:intron 35.0%
! TAGTCAAAATTTTCAGCAGC+AGG + Chr3:76783127-76783146 None:intergenic 35.0%
! TATTTTTCGCCATCATCGTT+TGG - Chr3:76781969-76781988 MsG0380015930.01.T01:intron 35.0%
! TCCACATGACTATTTGGTTT+GGG - Chr3:76789903-76789922 MsG0380015930.01.T01:CDS 35.0%
! TCGTTAATTTGGAAACTCAC+TGG - Chr3:76786897-76786916 MsG0380015930.01.T01:intron 35.0%
! TCTTTTGCATCGAGTAAACA+TGG - Chr3:76788740-76788759 MsG0380015930.01.T01:intron 35.0%
! TGAATGTCTTGGATGGTTTT+TGG - Chr3:76784986-76785005 MsG0380015930.01.T01:intron 35.0%
! TTTTATCCAAAGAGTTGGAG+CGG - Chr3:76787613-76787632 MsG0380015930.01.T01:CDS 35.0%
! TTTTCAATACGCTTCAGAGT+GGG - Chr3:76786867-76786886 MsG0380015930.01.T01:intron 35.0%
! TTTTTGTATTCCAGACTGGA+GGG + Chr3:76782671-76782690 None:intergenic 35.0%
!! AAACTTTTGTGGGTTGAGTT+AGG - Chr3:76786236-76786255 MsG0380015930.01.T01:intron 35.0%
!! CTTTGCTTCCATTTTAGTGA+AGG + Chr3:76790013-76790032 None:intergenic 35.0%
!! GTTAGGGATTTTGATGAAGA+TGG - Chr3:76787232-76787251 MsG0380015930.01.T01:intron 35.0%
!! GTTATCTCCCGAATTTTTAG+GGG + Chr3:76785972-76785991 None:intergenic 35.0%
!! GTTGTTTTCATAAGCTATCC+TGG + Chr3:76782568-76782587 None:intergenic 35.0%
!! GTTTTGGACTGAAATGAAGT+TGG - Chr3:76784518-76784537 MsG0380015930.01.T01:three_prime_UTR 35.0%
!! TAATCTCCCATTTTGAGGAT+GGG + Chr3:76790074-76790093 None:intergenic 35.0%
!! TAGGGATTTTGATGAAGATG+GGG - Chr3:76787234-76787253 MsG0380015930.01.T01:intron 35.0%
!! TCTTGAGTAGTTCTGAACTT+GGG - Chr3:76788785-76788804 MsG0380015930.01.T01:intron 35.0%
!! TGTTGATTGGTCTCTGTTTA+GGG - Chr3:76781909-76781928 MsG0380015930.01.T01:intron 35.0%
!! TTGTTGATTGGTCTCTGTTT+AGG - Chr3:76781908-76781927 MsG0380015930.01.T01:intron 35.0%
!! TTTAGCTCTATCCTTCCATT+GGG - Chr3:76788438-76788457 MsG0380015930.01.T01:intron 35.0%
!! TTTTGAGAAAAGAGAATGGC+AGG - Chr3:76786818-76786837 MsG0380015930.01.T01:intron 35.0%
!!! GATTTTCACATAGCTCTAGT+GGG - Chr3:76784685-76784704 MsG0380015930.01.T01:three_prime_UTR 35.0%
!!! TGATTTTCACATAGCTCTAG+TGG - Chr3:76784684-76784703 MsG0380015930.01.T01:three_prime_UTR 35.0%
!!! TGCTACGGATTCTATTTTTG+TGG + Chr3:76783676-76783695 None:intergenic 35.0%
!!! TTTTTTGTATTCCAGACTGG+AGG + Chr3:76782672-76782691 None:intergenic 35.0%
AAAATCATCTCCCCATTAGG+AGG + Chr3:76787424-76787443 None:intergenic 40.0%
AAAATTCGGGAGATAACTCC+CGG - Chr3:76785975-76785994 MsG0380015930.01.T01:intron 40.0%
AAAGTCAGAAACCAAGGTCA+TGG + Chr3:76787075-76787094 None:intergenic 40.0%
AACAAGATTGTGGTGTGGTA+TGG - Chr3:76789429-76789448 MsG0380015930.01.T01:intron 40.0%
AACCAAGGTCATGGAAAGAA+TGG + Chr3:76787066-76787085 None:intergenic 40.0%
AACCATTTAGGCTGTCTTCA+AGG + Chr3:76783459-76783478 None:intergenic 40.0%
AACTGTATCTCTAACCTGTG+AGG + Chr3:76785744-76785763 None:intergenic 40.0%
AAGATGCAGATGTGAAGGTT+AGG - Chr3:76787215-76787234 MsG0380015930.01.T01:intron 40.0%
ACATGAAGTTCCTACCAATC+AGG - Chr3:76789167-76789186 MsG0380015930.01.T01:intron 40.0%
ACCCAAACCAAATAGTCATG+TGG + Chr3:76789907-76789926 None:intergenic 40.0%
ACGCGCCAAGAAAACAAATA+TGG + Chr3:76785808-76785827 None:intergenic 40.0%
ACGGACATGATTATACAACG+AGG + Chr3:76784802-76784821 None:intergenic 40.0%
ACTAAAGATGATCGAGGAGT+TGG + Chr3:76781869-76781888 None:intergenic 40.0%
ACTGTATCTCTAACCTGTGA+GGG + Chr3:76785743-76785762 None:intergenic 40.0%
AGATGCAGATGTGAAGGTTA+GGG - Chr3:76787216-76787235 MsG0380015930.01.T01:intron 40.0%
AGCCATATCTACAAGCTATG+TGG + Chr3:76786172-76786191 None:intergenic 40.0%
AGGAGTTGGAAGTAGCAAAA+GGG + Chr3:76781855-76781874 None:intergenic 40.0%
AGTCCCACAAACTTGAATAG+GGG + Chr3:76786581-76786600 None:intergenic 40.0%
AGTGATGTGTGTAAGCCATA+TGG - Chr3:76789195-76789214 MsG0380015930.01.T01:intron 40.0%
ATAGTCATGTGGAGTAGTGT+TGG + Chr3:76789896-76789915 None:intergenic 40.0%
ATCCTGCAGGCAACTATATA+TGG + Chr3:76789334-76789353 None:intergenic 40.0%
ATTCAGATATCCTCCTATCG+AGG - Chr3:76786770-76786789 MsG0380015930.01.T01:CDS 40.0%
CAACTAGTGAACTGACCATA+TGG + Chr3:76789213-76789232 None:intergenic 40.0%
CAATAGATAACTGATCCTGC+AGG + Chr3:76789347-76789366 None:intergenic 40.0%
CACTAAAATGGAAGCAAAGG+AGG - Chr3:76790014-76790033 MsG0380015930.01.T01:five_prime_UTR 40.0%
CACTACTCCACATGACTATT+TGG - Chr3:76789897-76789916 MsG0380015930.01.T01:CDS 40.0%
CAGCCTTCACAATGACTTAA+TGG - Chr3:76787306-76787325 MsG0380015930.01.T01:intron 40.0%
CAGTATACAAGACCACCATT+AGG + Chr3:76783309-76783328 None:intergenic 40.0%
CATTCCAAGCAAGATTCCAA+GGG - Chr3:76784604-76784623 MsG0380015930.01.T01:three_prime_UTR 40.0%
CATTGGAGAAAGATATCGGA+GGG + Chr3:76786449-76786468 None:intergenic 40.0%
CGCGCCAAGAAAACAAATAT+GGG + Chr3:76785807-76785826 None:intergenic 40.0%
CTACAGAAAGTCAGAAACCA+AGG + Chr3:76787081-76787100 None:intergenic 40.0%
CTACTGGAAACTCTTGTCAA+AGG - Chr3:76785511-76785530 MsG0380015930.01.T01:intron 40.0%
CTCCACATGACTATTTGGTT+TGG - Chr3:76789902-76789921 MsG0380015930.01.T01:CDS 40.0%
CTGCAGGATCAGTTATCTAT+TGG - Chr3:76789345-76789364 MsG0380015930.01.T01:intron 40.0%
GAAAGAAAAAAATGGCCTCC+GGG + Chr3:76785996-76786015 None:intergenic 40.0%
GCCAAGAAAACAAATATGGG+TGG + Chr3:76785804-76785823 None:intergenic 40.0%
GCCATATCTACAAGCTATGT+GGG + Chr3:76786171-76786190 None:intergenic 40.0%
GGACCTTGTGACTAACAAAA+AGG - Chr3:76784190-76784209 MsG0380015930.01.T01:intron 40.0%
GGCAACTATATATGGTATGC+AGG + Chr3:76789326-76789345 None:intergenic 40.0%
GGCAGCTTAAAATACATGTG+TGG - Chr3:76784959-76784978 MsG0380015930.01.T01:intron 40.0%
GGCCCAAGTTTCAAATACTA+AGG - Chr3:76786257-76786276 MsG0380015930.01.T01:intron 40.0%
GGTGGCCCATTAACAAATTT+AGG + Chr3:76785786-76785805 None:intergenic 40.0%
GTACTATACCATATAGGTGC+AGG - Chr3:76789960-76789979 MsG0380015930.01.T01:five_prime_UTR 40.0%
GTATATATAATGCAGCCACC+AGG - Chr3:76788519-76788538 MsG0380015930.01.T01:CDS 40.0%
GTCCTACAAACTTGAATAGG+AGG + Chr3:76786523-76786542 None:intergenic 40.0%
GTGGCTTCTTCTGTTCATTT+GGG - Chr3:76783184-76783203 MsG0380015930.01.T01:intron 40.0%
TAACCACTCTTGTCACTGTT+TGG - Chr3:76782178-76782197 MsG0380015930.01.T01:intron 40.0%
TACCATATATAGTTGCCTGC+AGG - Chr3:76789329-76789348 MsG0380015930.01.T01:intron 40.0%
TACTTGCTTGATTCACAGGT+TGG - Chr3:76783933-76783952 MsG0380015930.01.T01:intron 40.0%
TAGGAAAAAGGACGGAGAAA+GGG + Chr3:76786554-76786573 None:intergenic 40.0%
TAGGCTATGTTTGGGAGTTT+GGG + Chr3:76786646-76786665 None:intergenic 40.0%
TAGGGGACTTAAAGAGACAT+CGG + Chr3:76785955-76785974 None:intergenic 40.0%
TATCATGCCAAACATTGCTG+CGG + Chr3:76787279-76787298 None:intergenic 40.0%
TCACTGTTTGGAGGAACTTA+TGG - Chr3:76782190-76782209 MsG0380015930.01.T01:intron 40.0%
TGAGCACAATTAGGACATAG+AGG - Chr3:76789688-76789707 MsG0380015930.01.T01:intron 40.0%
TGAGGAGCTGGACAATTATT+TGG - Chr3:76783486-76783505 MsG0380015930.01.T01:intron 40.0%
TGCACTCTTAGGCTATGTTT+GGG + Chr3:76786654-76786673 None:intergenic 40.0%
TGGGTTATGAATGTCTTGGA+TGG - Chr3:76784979-76784998 MsG0380015930.01.T01:intron 40.0%
TGTACTCAACACAACTCTCA+AGG + Chr3:76787848-76787867 None:intergenic 40.0%
TGTGGCTTCTTCTGTTCATT+TGG - Chr3:76783183-76783202 MsG0380015930.01.T01:intron 40.0%
TGTGTACTTGCTTGATTCAC+AGG - Chr3:76783929-76783948 MsG0380015930.01.T01:intron 40.0%
TTAGGAAAAAGGACGGAGAA+AGG + Chr3:76786555-76786574 None:intergenic 40.0%
TTAGGCTATGTTTGGGAGTT+TGG + Chr3:76786647-76786666 None:intergenic 40.0%
TTATATGTGGATCCAAAGCC+TGG + Chr3:76788540-76788559 None:intergenic 40.0%
TTGAAGACAGCCTAAATGGT+TGG - Chr3:76783458-76783477 MsG0380015930.01.T01:intron 40.0%
TTGACTGAAAAATGCCATCC+GGG + Chr3:76786045-76786064 None:intergenic 40.0%
TTGCACTCTTAGGCTATGTT+TGG + Chr3:76786655-76786674 None:intergenic 40.0%
TTTGACTATCCTGTTGCGAT+GGG - Chr3:76783139-76783158 MsG0380015930.01.T01:intron 40.0%
! AAAGCCAGATTGGTTGCAAA+GGG - Chr3:76788331-76788350 MsG0380015930.01.T01:intron 40.0%
! AGAATGTTCAGTGTGGATTG+GGG - Chr3:76787374-76787393 MsG0380015930.01.T01:intron 40.0%
! CAAGTTGAACCATTGCAGAA+AGG + Chr3:76784139-76784158 None:intergenic 40.0%
! CAGAGTAATCTCCCATTTTG+AGG + Chr3:76790079-76790098 None:intergenic 40.0%
! CCTAATGGGGAGATGATTTT+GGG - Chr3:76787424-76787443 MsG0380015930.01.T01:intron 40.0%
! CTAATGGGGAGATGATTTTG+GGG - Chr3:76787425-76787444 MsG0380015930.01.T01:intron 40.0%
! GTGATTGGCCATTTAAAGCA+TGG + Chr3:76785877-76785896 None:intergenic 40.0%
! GTTTTATACCACTGGACTTG+AGG - Chr3:76785224-76785243 MsG0380015930.01.T01:intron 40.0%
! TATCTTTTGCTTCTCAGCTG+CGG - Chr3:76781762-76781781 MsG0380015930.01.T01:intron 40.0%
! TCCCACATAGCTTGTAGATA+TGG - Chr3:76786167-76786186 MsG0380015930.01.T01:intron 40.0%
! TCCTAATGGGGAGATGATTT+TGG - Chr3:76787423-76787442 MsG0380015930.01.T01:intron 40.0%
! TGTGTGGGTTATGAATGTCT+TGG - Chr3:76784975-76784994 MsG0380015930.01.T01:intron 40.0%
! TTTTCTTTCCTCAAGTCCAG+TGG + Chr3:76785235-76785254 None:intergenic 40.0%
!! AAACACATCAAGGCCTTGTT+TGG + Chr3:76782965-76782984 None:intergenic 40.0%
!! AAACTTGAATAGGGGGTGTT+AGG + Chr3:76786573-76786592 None:intergenic 40.0%
!! AATAGGGGGTGTTAGGAAAA+AGG + Chr3:76786566-76786585 None:intergenic 40.0%
!! CATGGTGAGTTTTATACCAC+TGG - Chr3:76785216-76785235 MsG0380015930.01.T01:intron 40.0%
!! CTCTTGAGTAGTTCTGAACT+TGG - Chr3:76788784-76788803 MsG0380015930.01.T01:intron 40.0%
!! CTTGAGTAGTTCTGAACTTG+GGG - Chr3:76788786-76788805 MsG0380015930.01.T01:intron 40.0%
!! CTTTAGCTCTATCCTTCCAT+TGG - Chr3:76788437-76788456 MsG0380015930.01.T01:intron 40.0%
!! GATCGTGTTTTTGATGCTAC+TGG - Chr3:76785495-76785514 MsG0380015930.01.T01:intron 40.0%
!! GCCACCCATATTTGTTTTCT+TGG - Chr3:76785800-76785819 MsG0380015930.01.T01:intron 40.0%
!! GGTTATGCTCAGCTTGTTAT+TGG - Chr3:76782082-76782101 MsG0380015930.01.T01:intron 40.0%
!! GTAATCTCCCATTTTGAGGA+TGG + Chr3:76790075-76790094 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG - Chr3:76786275-76786294 MsG0380015930.01.T01:intron 40.0%
!! TACTTGGTTTTTGATTGCCC+TGG - Chr3:76783517-76783536 MsG0380015930.01.T01:intron 40.0%
!! TTAGGGTTGGTGTGGTTTAT+GGG - Chr3:76781926-76781945 MsG0380015930.01.T01:intron 40.0%
!! TTTAGGGTTGGTGTGGTTTA+TGG - Chr3:76781925-76781944 MsG0380015930.01.T01:intron 40.0%
!! TTTTGACTATCCTGTTGCGA+TGG - Chr3:76783138-76783157 MsG0380015930.01.T01:intron 40.0%
!!! GGAGCTTAACTTTTTTCGGT+TGG - Chr3:76783219-76783238 MsG0380015930.01.T01:intron 40.0%
AAAAGGACGGAGAAAGGGAA+AGG + Chr3:76786549-76786568 None:intergenic 45.0%
AGATATCCTCCTATCGAGGA+TGG - Chr3:76786774-76786793 MsG0380015930.01.T01:CDS 45.0%
AGCAGTACACCAAACGATGA+TGG + Chr3:76781981-76782000 None:intergenic 45.0%
AGCCTTGGCAATCCTTCTTA+AGG + Chr3:76788600-76788619 None:intergenic 45.0%
AGGCTATGTTTGGGAGTTTG+GGG + Chr3:76786645-76786664 None:intergenic 45.0%
AGGGGACTTAAAGAGACATC+GGG + Chr3:76785954-76785973 None:intergenic 45.0%
AGGGTTAAGCGTGGATGATT+AGG + Chr3:76781836-76781855 None:intergenic 45.0%
AGTAGCAAAAGGGTTAAGCG+TGG + Chr3:76781845-76781864 None:intergenic 45.0%
ATACAACGAGGTCAGTGTAC+TGG + Chr3:76784790-76784809 None:intergenic 45.0%
ATAGCACAATCACGTACGCA+GGG + Chr3:76788053-76788072 None:intergenic 45.0%
ATATGATACTCCCTCCAGTC+TGG - Chr3:76782658-76782677 MsG0380015930.01.T01:intron 45.0%
ATCACCCTTGGAATCTTGCT+TGG + Chr3:76784611-76784630 None:intergenic 45.0%
ATGTTACTCCATCGTTGCCT+CGG - Chr3:76785701-76785720 MsG0380015930.01.T01:intron 45.0%
CACATCACTATCCTCCTGAT+TGG + Chr3:76789184-76789203 None:intergenic 45.0%
CACCTTGAAGACAGCCTAAA+TGG - Chr3:76783454-76783473 MsG0380015930.01.T01:intron 45.0%
CAGGATCAAGATTCACGACA+TGG + Chr3:76783108-76783127 None:intergenic 45.0%
CCCAAAATCATCTCCCCATT+AGG + Chr3:76787427-76787446 None:intergenic 45.0%
CGGTACCACATAATTATGGC+AGG + Chr3:76784903-76784922 None:intergenic 45.0%
GAGGAGTTGGAAGTAGCAAA+AGG + Chr3:76781856-76781875 None:intergenic 45.0%
GATACCCTTTGCAACCAATC+TGG + Chr3:76788338-76788357 None:intergenic 45.0%
GATCTCAACAGATACTACCG+AGG + Chr3:76785721-76785740 None:intergenic 45.0%
GATGATGTTATGGAGGAGCT+TGG - Chr3:76783276-76783295 MsG0380015930.01.T01:intron 45.0%
GATTAGGAGTTAGGACTAGG+AGG - Chr3:76789394-76789413 MsG0380015930.01.T01:intron 45.0%
GCAGAATGTGTATTGTCGTG+TGG - Chr3:76783165-76783184 MsG0380015930.01.T01:intron 45.0%
GCATTCCAAGCAAGATTCCA+AGG - Chr3:76784603-76784622 MsG0380015930.01.T01:three_prime_UTR 45.0%
GCATTGGAGAAAGATATCGG+AGG + Chr3:76786450-76786469 None:intergenic 45.0%
GGGTTAAGCGTGGATGATTA+GGG + Chr3:76781835-76781854 None:intergenic 45.0%
GTATGGTGACTCACTAAAGC+TGG - Chr3:76789446-76789465 MsG0380015930.01.T01:intron 45.0%
GTCCCACAAACTTGAATAGG+GGG + Chr3:76786580-76786599 None:intergenic 45.0%
GTCCTTAAGAAGGATTGCCA+AGG - Chr3:76788595-76788614 MsG0380015930.01.T01:intron 45.0%
GTTATGGAGGAGCTTGGATT+AGG - Chr3:76783282-76783301 MsG0380015930.01.T01:intron 45.0%
TATAGCACAATCACGTACGC+AGG + Chr3:76788054-76788073 None:intergenic 45.0%
TATCTGTTGAGATCCCTCAC+AGG - Chr3:76785727-76785746 MsG0380015930.01.T01:intron 45.0%
TCAATTGTAACACCTCCGGT+AGG - Chr3:76786014-76786033 MsG0380015930.01.T01:intron 45.0%
TCACTATCCTCCTGATTGGT+AGG + Chr3:76789180-76789199 None:intergenic 45.0%
TCCCTAGCTCCCAAACAAAT+TGG - Chr3:76787104-76787123 MsG0380015930.01.T01:intron 45.0%
TCTGCAACAAGATTGTGGTG+TGG - Chr3:76789424-76789443 MsG0380015930.01.T01:intron 45.0%
TGAAGCGTGGAAAACACTAG+TGG + Chr3:76786121-76786140 None:intergenic 45.0%
TGAAGTTCCTACCAATCAGG+AGG - Chr3:76789170-76789189 MsG0380015930.01.T01:intron 45.0%
TGCCATTCTTTCCATGACCT+TGG - Chr3:76787061-76787080 MsG0380015930.01.T01:intron 45.0%
TGGAGAAGATGCAGATGTGA+AGG - Chr3:76787210-76787229 MsG0380015930.01.T01:intron 45.0%
TTCTGAACTTGGGGTCTGAT+TGG - Chr3:76788795-76788814 MsG0380015930.01.T01:intron 45.0%
TTGAACCATTGCAGAAAGGG+AGG + Chr3:76784135-76784154 None:intergenic 45.0%
! ACACCCCCTATTCAAGTTTG+TGG - Chr3:76786574-76786593 MsG0380015930.01.T01:intron 45.0%
! AGCCAATTTGTTTGGGAGCT+AGG + Chr3:76787109-76787128 None:intergenic 45.0%
! ATTCACATGTGCCGGTATTC+CGG - Chr3:76783862-76783881 MsG0380015930.01.T01:intron 45.0%
! CAAAGCCAGATTGGTTGCAA+AGG - Chr3:76788330-76788349 MsG0380015930.01.T01:intron 45.0%
! CACCCCCTATTCAAGTTTGT+GGG - Chr3:76786575-76786594 MsG0380015930.01.T01:intron 45.0%
! CTACGAAGCATCAGCAGTAA+GGG + Chr3:76785112-76785131 None:intergenic 45.0%
! CTTGGATTAGGTCCTAATGG+TGG - Chr3:76783294-76783313 MsG0380015930.01.T01:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - Chr3:76786280-76786299 MsG0380015930.01.T01:intron 45.0%
! GAGCTTGGATTAGGTCCTAA+TGG - Chr3:76783291-76783310 MsG0380015930.01.T01:intron 45.0%
! GATAGTAGAAAGGTGGGTTC+TGG + Chr3:76784328-76784347 None:intergenic 45.0%
! GCCAATTTGTTTGGGAGCTA+GGG + Chr3:76787108-76787127 None:intergenic 45.0%
! GGAAGTGCAGAGATGATTGA+CGG + Chr3:76782038-76782057 None:intergenic 45.0%
! TCTACGAAGCATCAGCAGTA+AGG + Chr3:76785113-76785132 None:intergenic 45.0%
! TTGTTTTCTTGGCGCGTGAA+GGG - Chr3:76785811-76785830 MsG0380015930.01.T01:intron 45.0%
!! GATTGGTCTCTGTTTAGGGT+TGG - Chr3:76781913-76781932 MsG0380015930.01.T01:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - Chr3:76786279-76786298 MsG0380015930.01.T01:intron 45.0%
!! GGTTCTGGATCCAAGAATCT+AGG + Chr3:76784313-76784332 None:intergenic 45.0%
!! TGGTGGTCTTGTATACTGCA+TGG - Chr3:76783311-76783330 MsG0380015930.01.T01:intron 45.0%
!! TTTGTTTTCTTGGCGCGTGA+AGG - Chr3:76785810-76785829 MsG0380015930.01.T01:intron 45.0%
!! ATAATATTAAAAAAAATTGA+AGG - Chr3:76789072-76789091 MsG0380015930.01.T01:intron 5.0%
!!! ATATCTTTATTTTTAAAAAA+TGG - Chr3:76790197-76790216 MsG0380015930.01.T01:intron 5.0%
!!! ATTTTTTAAAAATAAAGATA+TGG + Chr3:76790198-76790217 None:intergenic 5.0%
AAGCAAAGGAGGCTGTAGAG+TGG - Chr3:76790025-76790044 MsG0380015930.01.T01:five_prime_UTR 50.0%
AGATACTACCGAGGCAACGA+TGG + Chr3:76785712-76785731 None:intergenic 50.0%
ATAATGCAGCCACCAGGCTT+TGG - Chr3:76788525-76788544 MsG0380015930.01.T01:CDS 50.0%
ATGCCAAACATTGCTGCGGA+AGG + Chr3:76787275-76787294 None:intergenic 50.0%
ATTACCTTGCCACTACCAGC+AGG + Chr3:76782109-76782128 None:intergenic 50.0%
ATTGACCTGCCATCCTCGAT+AGG + Chr3:76786786-76786805 None:intergenic 50.0%
CAAAGAGTTGGAGCGGAGTA+AGG - Chr3:76787620-76787639 MsG0380015930.01.T01:CDS 50.0%
CCACTCTTGTCACTGTTTGG+AGG - Chr3:76782181-76782200 MsG0380015930.01.T01:intron 50.0%
CCTCATCGAGCCAACCATTT+AGG + Chr3:76783471-76783490 None:intergenic 50.0%
CCTCCAAACAGTGACAAGAG+TGG + Chr3:76782184-76782203 None:intergenic 50.0%
CTTACTCCGCTCCAACTCTT+TGG + Chr3:76787622-76787641 None:intergenic 50.0%
GCAGATTCCCTGCACCTATA+TGG + Chr3:76789971-76789990 None:intergenic 50.0%
GCTATGTTTGGGAGTTTGGG+GGG + Chr3:76786643-76786662 None:intergenic 50.0%
GGACTTAAAGAGACATCGGG+GGG + Chr3:76785951-76785970 None:intergenic 50.0%
GGCTATGTTTGGGAGTTTGG+GGG + Chr3:76786644-76786663 None:intergenic 50.0%
GGGACTTAAAGAGACATCGG+GGG + Chr3:76785952-76785971 None:intergenic 50.0%
GGGGACTTAAAGAGACATCG+GGG + Chr3:76785953-76785972 None:intergenic 50.0%
GTCGCACAGTTTCACAGTGT+TGG + Chr3:76783078-76783097 None:intergenic 50.0%
GTTATTGGTCCTGCTGGTAG+TGG - Chr3:76782097-76782116 MsG0380015930.01.T01:intron 50.0%
TATGTGGATCCAAAGCCTGG+TGG + Chr3:76788537-76788556 None:intergenic 50.0%
TGCCAAACATTGCTGCGGAA+GGG + Chr3:76787274-76787293 None:intergenic 50.0%
TGGCGTCTGCAACAAGATTG+TGG - Chr3:76789419-76789438 MsG0380015930.01.T01:intron 50.0%
TTCCCTTCCGCAGCAATGTT+TGG - Chr3:76787269-76787288 MsG0380015930.01.T01:intron 50.0%
TTCTGCTTACCCATCGCAAC+AGG + Chr3:76783151-76783170 None:intergenic 50.0%
! AGTCACACTCATCTGAAGCG+TGG + Chr3:76786134-76786153 None:intergenic 50.0%
! CTATGGCTTTGCTGAAAGCC+TGG - Chr3:76787685-76787704 MsG0380015930.01.T01:intron 50.0%
! TTTTGCTTCTCAGCTGCGGA+AGG - Chr3:76781766-76781785 MsG0380015930.01.T01:intron 50.0%
!! ATGGGGAGATGATTTTGGGG+AGG - Chr3:76787428-76787447 MsG0380015930.01.T01:intron 50.0%
!! CAGCTTGTTATTGGTCCTGC+TGG - Chr3:76782091-76782110 MsG0380015930.01.T01:intron 50.0%
!! CCTAAATGGTTGGCTCGATG+AGG - Chr3:76783468-76783487 MsG0380015930.01.T01:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - Chr3:76786278-76786297 MsG0380015930.01.T01:intron 50.0%
!! GGGCTAGTTTGTGTAGCCTA+AGG - Chr3:76783750-76783769 MsG0380015930.01.T01:intron 50.0%
!! GGGGGTGTTAGGAAAAAGGA+CGG + Chr3:76786562-76786581 None:intergenic 50.0%
!! GTCTCTGTTTAGGGTTGGTG+TGG - Chr3:76781918-76781937 MsG0380015930.01.T01:intron 50.0%
!! TGGGGAGATGATTTTGGGGA+GGG - Chr3:76787429-76787448 MsG0380015930.01.T01:intron 50.0%
AGTTTGGAGGGGAGGGCTTT+GGG - Chr3:76786291-76786310 MsG0380015930.01.T01:intron 55.0%
ATCCTCCTATCGAGGATGGC+AGG - Chr3:76786778-76786797 MsG0380015930.01.T01:CDS 55.0%
ATGTTTGGGAGTTTGGGGGG+CGG + Chr3:76786640-76786659 None:intergenic 55.0%
ATTCGGGAGATAACTCCCGG+AGG - Chr3:76785978-76785997 MsG0380015930.01.T01:intron 55.0%
CATGGCCTCCCTTTCTGCAA+TGG - Chr3:76784127-76784146 MsG0380015930.01.T01:intron 55.0%
CTTCGCAGTCACTGCTTGCT+TGG - Chr3:76787465-76787484 MsG0380015930.01.T01:intron 55.0%
GGAGTTAGGACTAGGAGGAG+TGG - Chr3:76789399-76789418 MsG0380015930.01.T01:intron 55.0%
GGCCAATCACGAGCATGAGA+GGG - Chr3:76785887-76785906 MsG0380015930.01.T01:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - Chr3:76786284-76786303 MsG0380015930.01.T01:intron 55.0%
TGCAGTCACGTGAGTGTGCA+AGG - Chr3:76783650-76783669 MsG0380015930.01.T01:intron 55.0%
TGCCCTCTCATGCTCGTGAT+TGG + Chr3:76785892-76785911 None:intergenic 55.0%
TGGCCAATCACGAGCATGAG+AGG - Chr3:76785886-76785905 MsG0380015930.01.T01:intron 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - Chr3:76786283-76786302 MsG0380015930.01.T01:intron 55.0%
ATCCGGGAGTTACCTACCGG+AGG + Chr3:76786029-76786048 None:intergenic 60.0%
CACCTCCGGTAGGTAACTCC+CGG - Chr3:76786024-76786043 MsG0380015930.01.T01:intron 60.0%
GACCTGCCATCCTCGATAGG+AGG + Chr3:76786783-76786802 None:intergenic 60.0%
GAGTTTGGAGGGGAGGGCTT+TGG - Chr3:76786290-76786309 MsG0380015930.01.T01:intron 60.0%
GCCATCCGGGAGTTACCTAC+CGG + Chr3:76786032-76786051 None:intergenic 60.0%
GTTTGGAGGGGAGGGCTTTG+GGG - Chr3:76786292-76786311 MsG0380015930.01.T01:intron 60.0%
TCCGGTAGGTAACTCCCGGA+TGG - Chr3:76786028-76786047 MsG0380015930.01.T01:intron 60.0%
TGTTTGGGAGTTTGGGGGGC+GGG + Chr3:76786639-76786658 None:intergenic 60.0%
! TTTGGAGGGGAGGGCTTTGG+GGG - Chr3:76786293-76786312 MsG0380015930.01.T01:intron 60.0%
!! GGGCGGGGGTGTTAGGAAAA+AGG + Chr3:76786623-76786642 None:intergenic 60.0%
!! TGGTCCTGCTGGTAGTGGCA+AGG - Chr3:76782102-76782121 MsG0380015930.01.T01:intron 60.0%
!! TGGTTGGCTCGATGAGGAGC+TGG - Chr3:76783474-76783493 MsG0380015930.01.T01:intron 60.0%
GTTTGGGAGTTTGGGGGGCG+GGG + Chr3:76786638-76786657 None:intergenic 65.0%
TTTGGGAGTTTGGGGGGCGG+GGG + Chr3:76786637-76786656 None:intergenic 65.0%
! CTTTGGGGGCAGGGGAGGAG+AGG - Chr3:76786307-76786326 MsG0380015930.01.T01:intron 70.0%
!! AGGGGAGGGCTTTGGGGGCA+GGG - Chr3:76786298-76786317 MsG0380015930.01.T01:intron 70.0%
!! GTTTGGGGGGCGGGGGTGTT+AGG + Chr3:76786630-76786649 None:intergenic 70.0%
!! GAGGGCTTTGGGGGCAGGGG+AGG - Chr3:76786302-76786321 MsG0380015930.01.T01:intron 75.0%
!! GAGGGGAGGGCTTTGGGGGC+AGG - Chr3:76786297-76786316 MsG0380015930.01.T01:intron 75.0%
!! GGGGAGGGCTTTGGGGGCAG+GGG - Chr3:76786299-76786318 MsG0380015930.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 76781743 76790263 76781743 ID=MsG0380015930.01;Name=MsG0380015930.01
Chr3 mRNA 76781743 76790263 76781743 ID=MsG0380015930.01.T01;Parent=MsG0380015930.01;Name=MsG0380015930.01.T01;_AED=0.45;_eAED=0.45;_QI=209|1|1|1|0.8|0.63|11|391|267
Chr3 exon 76781743 76781771 76781743 ID=MsG0380015930.01.T01:exon:24942;Parent=MsG0380015930.01.T01
Chr3 exon 76784380 76784838 76784380 ID=MsG0380015930.01.T01:exon:24941;Parent=MsG0380015930.01.T01
Chr3 five_prime_UTR 76790223 76790263 76790223 ID=MsG0380015930.01.T01:five_prime_utr;Parent=MsG0380015930.01.T01
Chr3 five_prime_UTR 76789928 76790095 76789928 ID=MsG0380015930.01.T01:five_prime_utr;Parent=MsG0380015930.01.T01
Chr3 CDS 76789883 76789927 76789883 ID=MsG0380015930.01.T01:cds;Parent=MsG0380015930.01.T01
Chr3 CDS 76788846 76788954 76788846 ID=MsG0380015930.01.T01:cds;Parent=MsG0380015930.01.T01
Chr3 CDS 76788672 76788753 76788672 ID=MsG0380015930.01.T01:cds;Parent=MsG0380015930.01.T01
Chr3 CDS 76788468 76788553 76788468 ID=MsG0380015930.01.T01:cds;Parent=MsG0380015930.01.T01
Chr3 CDS 76788056 76788159 76788056 ID=MsG0380015930.01.T01:cds;Parent=MsG0380015930.01.T01
Chr3 CDS 76787784 76787914 76787784 ID=MsG0380015930.01.T01:cds;Parent=MsG0380015930.01.T01
Chr3 CDS 76787598 76787691 76787598 ID=MsG0380015930.01.T01:cds;Parent=MsG0380015930.01.T01
Chr3 CDS 76786749 76786804 76786749 ID=MsG0380015930.01.T01:cds;Parent=MsG0380015930.01.T01
Chr3 CDS 76784742 76784838 76784742 ID=MsG0380015930.01.T01:cds;Parent=MsG0380015930.01.T01
Chr3 three_prime_UTR 76784380 76784741 76784380 ID=MsG0380015930.01.T01:three_prime_utr;Parent=MsG0380015930.01.T01
Chr3 three_prime_UTR 76781743 76781771 76781743 ID=MsG0380015930.01.T01:three_prime_utr;Parent=MsG0380015930.01.T01
Chr3 mRNA 76784244 76790263 76784244 ID=MsG0380015930.01.T02;Parent=MsG0380015930.01;Name=MsG0380015930.01.T02;_AED=0.44;_eAED=0.44;_QI=209|1|1|1|0.88|0.8|10|498|267
Chr3 exon 76784244 76784838 76784244 ID=MsG0380015930.01.T02:exon:24943;Parent=MsG0380015930.01.T02
Chr3 five_prime_UTR 76790223 76790263 76790223 ID=MsG0380015930.01.T02:five_prime_utr;Parent=MsG0380015930.01.T02
Chr3 five_prime_UTR 76789928 76790095 76789928 ID=MsG0380015930.01.T02:five_prime_utr;Parent=MsG0380015930.01.T02
Chr3 CDS 76789883 76789927 76789883 ID=MsG0380015930.01.T02:cds;Parent=MsG0380015930.01.T02
Chr3 CDS 76788846 76788954 76788846 ID=MsG0380015930.01.T02:cds;Parent=MsG0380015930.01.T02
Chr3 CDS 76788672 76788753 76788672 ID=MsG0380015930.01.T02:cds;Parent=MsG0380015930.01.T02
Chr3 CDS 76788468 76788553 76788468 ID=MsG0380015930.01.T02:cds;Parent=MsG0380015930.01.T02
Chr3 CDS 76788056 76788159 76788056 ID=MsG0380015930.01.T02:cds;Parent=MsG0380015930.01.T02
Chr3 CDS 76787784 76787914 76787784 ID=MsG0380015930.01.T02:cds;Parent=MsG0380015930.01.T02
Chr3 CDS 76787598 76787691 76787598 ID=MsG0380015930.01.T02:cds;Parent=MsG0380015930.01.T02
Chr3 CDS 76786749 76786804 76786749 ID=MsG0380015930.01.T02:cds;Parent=MsG0380015930.01.T02
Chr3 CDS 76784742 76784838 76784742 ID=MsG0380015930.01.T02:cds;Parent=MsG0380015930.01.T02
Chr3 three_prime_UTR 76784244 76784741 76784244 ID=MsG0380015930.01.T02:three_prime_utr;Parent=MsG0380015930.01.T02
Gene Sequence

>MsG0380015930.01.T01

ATGGGTTATGCTCAGCTTGTTATTGGTCCTGCTGGTAGTGGCAAGTCTACATATTGCTCGAGTTTGTACCAACACTGTGAAACTGTGCGACGATCAATCCATGTCGTGAATCTTGATCCTGCTGCTGAAAATTTTGACTATCCTGTTGCGATGGATGTAAGGGAACTCATTTCTTTGGATGATGTTATGGAGGAGCTTGGATTAGGTCCTAATGGTGGTCTTGTATACTGCATGGAACACCTTGAAGACAGCCTAAATGGTTGGCTCGATGAGGAGCTGGACAATTATTTGGATGACGAGTACTTGGTTTTTGATTGCCCTGGGCAGATAGAACTTTATTCACATGTGCCGGTATTCCGGAATTTTGTTGAACATTTGAAACGAAGAAATTTTAATGTCTGTGTTGTGTACTTGCTTGATTCACAGTTCATGGTAGATGTGACCAAATTTATAAGTGGATGCATGGCCTCCCTTTCTGCAATGGTTCAACTTGAACTCCCTCATGTCAATATTCTCTCAAAAATGGACCTTGTGACTAACAAAAAGGATCTTGAAGAATTCTTGGATCCAGAACCCACCTTTCTACTATCTGAATTGAATAAACGGATGGCTCCTCAGTATGCAAAGTTGAATAAATCTTTGATTGATGTGGTAAGTAGTTATAACATGGTGAGTTTTATACCACTGGACTTGAGGAAAGAAAAAAGTATACAATATGTATTGGCTCAAATTGACAACTGCATTCAGTATGGAGAAGATGCAGATGTGAAGGTTAGGGATTTTGATGAAGATGGGGATGAGTAG

>MsG0380015930.01.T02

ATGGGTTATGCTCAGCTTGTTATTGGTCCTGCTGGTAGTGGCAAGTCTACATATTGCTCGAGTTTGTACCAACACTGTGAAACTGTGCGACGATCAATCCATGTCGTGAATCTTGATCCTGCTGCTGAAAATTTTGACTATCCTGTTGCGATGGATGTAAGGGAACTCATTTCTTTGGATGATGTTATGGAGGAGCTTGGATTAGGTCCTAATGGTGGTCTTGTATACTGCATGGAACACCTTGAAGACAGCCTAAATGGTTGGCTCGATGAGGAGCTGGACAATTATTTGGATGACGAGTACTTGGTTTTTGATTGCCCTGGGCAGATAGAACTTTATTCACATGTGCCGGTATTCCGGAATTTTGTTGAACATTTGAAACGAAGAAATTTTAATGTCTGTGTTGTGTACTTGCTTGATTCACAGTTCATGGTAGATGTGACCAAATTTATAAGTGGATGCATGGCCTCCCTTTCTGCAATGGTTCAACTTGAACTCCCTCATGTCAATATTCTCTCAAAAATGGACCTTGTGACTAACAAAAAGGATCTTGAAGAATTCTTGGATCCAGAACCCACCTTTCTACTATCTGAATTGAATAAACGGATGGCTCCTCAGTATGCAAAGTTGAATAAATCTTTGATTGATGTGGTAAGTAGTTATAACATGGTGAGTTTTATACCACTGGACTTGAGGAAAGAAAAAAGTATACAATATGTATTGGCTCAAATTGACAACTGCATTCAGTATGGAGAAGATGCAGATGTGAAGGTTAGGGATTTTGATGAAGATGGGGATGAGTAG

Protein sequence

>MsG0380015930.01.T01

MGYAQLVIGPAGSGKSTYCSSLYQHCETVRRSIHVVNLDPAAENFDYPVAMDVRELISLDDVMEELGLGPNGGLVYCMEHLEDSLNGWLDEELDNYLDDEYLVFDCPGQIELYSHVPVFRNFVEHLKRRNFNVCVVYLLDSQFMVDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTNKKDLEEFLDPEPTFLLSELNKRMAPQYAKLNKSLIDVVSSYNMVSFIPLDLRKEKSIQYVLAQIDNCIQYGEDADVKVRDFDEDGDE*

>MsG0380015930.01.T02

MGYAQLVIGPAGSGKSTYCSSLYQHCETVRRSIHVVNLDPAAENFDYPVAMDVRELISLDDVMEELGLGPNGGLVYCMEHLEDSLNGWLDEELDNYLDDEYLVFDCPGQIELYSHVPVFRNFVEHLKRRNFNVCVVYLLDSQFMVDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTNKKDLEEFLDPEPTFLLSELNKRMAPQYAKLNKSLIDVVSSYNMVSFIPLDLRKEKSIQYVLAQIDNCIQYGEDADVKVRDFDEDGDE*