AlfalfaGEDB | MsG0380014034.01

M. sativa cultivar ZhongmuNo.1 / MsG0380014034.01

KEGG: K05572
GO: GO:0016020 GO:0055114
PFAM: PF00146

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014034.01.T01	AWW91833.1	85.621	153	2	1	1	133	4	156	3.24E-81	246
MsG0380014034.01.T02	QVX28522.1	76.282	156	3	1	1	122	208	363	5.46E-68	219
MsG0380014034.01.T03	RHN75751.1	81.513	119	0	1	1	97	25	143	1.27E-53	174

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014034.01.T01	A4GGF1	80.392	153	10	1	1	133	211	363	3.47E-77	235
MsG0380014034.01.T02	Q9BBN9	73.718	156	7	1	1	122	208	363	1.88E-69	215
MsG0380014034.01.T03	Q9BBN9	77.311	119	5	1	1	97	245	363	1.54E-50	165
MsG0380014034.01.T04	Q9BBN9	100	31	0	0	1	31	333	363	3.04E-12	60.8

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014034.01.T02	A0A2Z4KH01	76.923	156	2	1	1	122	1	156	2.44e-72	222
MsG0380014034.01.T03	A0A396JGB6	81.513	119	0	1	1	97	25	143	6.09e-54	174
MsG0380014034.01.T04	A0A859CNJ6	100.000	31	0	0	1	31	1	31	6.96e-11	58.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048059.01	MsG0380014034.01	0.808114	3.630827e-50	2.058393e-47
MsG0080048313.01	MsG0380014034.01	0.801116	1.047770e-48	4.963508e-46
MsG0080048560.01	MsG0380014034.01	0.829332	5.462932e-55	5.574562e-52
MsG0080048689.01	MsG0380014034.01	0.868971	4.390863e-66	1.619526e-62
MsG0080048690.01	MsG0380014034.01	0.831965	1.237622e-55	1.364225e-52
MsG0080048691.01	MsG0380014034.01	0.853883	1.780179e-61	3.903942e-58
MsG0080048692.01	MsG0380014034.01	0.803523	3.347332e-49	1.685883e-46
MsG0080048697.01	MsG0380014034.01	0.830231	3.298808e-55	3.455038e-52
MsG0080048698.01	MsG0380014034.01	0.842899	1.950147e-58	2.999696e-55
MsG0080048699.01	MsG0380014034.01	0.806820	6.831434e-50	3.744501e-47
MsG0080049076.01	MsG0380014034.01	0.819973	8.767128e-53	6.848321e-50
MsG0080049077.01	MsG0380014034.01	0.808479	3.035524e-50	1.737543e-47
MsG0180001919.01	MsG0380014034.01	0.803822	2.901514e-49	1.472565e-46
MsG0180004292.01	MsG0380014034.01	0.801706	7.935702e-49	3.815407e-46
MsG0180004301.01	MsG0380014034.01	0.812836	3.468939e-51	2.228689e-48
MsG0180004505.01	MsG0380014034.01	0.809363	1.963486e-50	1.150563e-47
MsG0180004553.01	MsG0380014034.01	0.802683	4.993127e-49	2.461190e-46
MsG0280006336.01	MsG0380014034.01	0.812084	5.064560e-51	3.189527e-48
MsG0280010625.01	MsG0380014034.01	0.800411	1.459790e-48	6.792685e-46
MsG0380013448.01	MsG0380014034.01	0.846618	1.939789e-59	3.358236e-56
MsG0380013887.01	MsG0380014034.01	0.851913	6.511179e-61	1.337818e-57
MsG0380013888.01	MsG0380014034.01	0.880688	4.467246e-70	2.542842e-66
MsG0380013889.01	MsG0380014034.01	0.865920	4.159965e-65	1.376700e-61
MsG0380013914.01	MsG0380014034.01	0.815013	1.149028e-51	7.830581e-49
MsG0380013915.01	MsG0380014034.01	0.832019	1.200215e-55	1.325070e-52
MsG0380013916.01	MsG0380014034.01	0.837724	4.391192e-57	5.754993e-54
MsG0380013917.01	MsG0380014034.01	0.906700	1.121393e-80	1.922127e-76
MsG0380013918.01	MsG0380014034.01	0.876876	9.851660e-69	4.854582e-65
MsG0380013919.01	MsG0380014034.01	0.843015	1.816738e-58	2.804437e-55
MsG0380013921.01	MsG0380014034.01	0.810080	1.376993e-50	8.222552e-48
MsG0380013925.01	MsG0380014034.01	0.805572	1.251015e-49	6.641218e-47
MsG0380013926.01	MsG0380014034.01	0.867589	1.224763e-65	4.299231e-62
MsG0380013928.01	MsG0380014034.01	0.801744	7.792911e-49	3.750374e-46
MsG0380013929.01	MsG0380014034.01	0.833223	6.033242e-56	6.903676e-53
MsG0380013930.01	MsG0380014034.01	0.835917	1.269008e-56	1.574242e-53
MsG0380013931.01	MsG0380014034.01	0.884853	1.344122e-71	9.011639e-68
MsG0380013932.01	MsG0380014034.01	0.855478	6.140092e-62	1.419541e-58
MsG0380013935.01	MsG0380014034.01	0.862340	5.431695e-64	1.585140e-60
MsG0380013938.01	MsG0380014034.01	0.846001	2.856710e-59	4.848326e-56
MsG0380013939.01	MsG0380014034.01	0.819156	1.346395e-52	1.027973e-49
MsG0380013940.01	MsG0380014034.01	0.806154	9.440483e-50	5.087156e-47
MsG0380013941.01	MsG0380014034.01	0.845296	4.436463e-59	7.359778e-56
MsG0380013942.01	MsG0380014034.01	0.841133	5.716781e-58	8.320060e-55
MsG0380013943.01	MsG0380014034.01	0.821989	3.010400e-53	2.487524e-50
MsG0380013944.01	MsG0380014034.01	0.831792	1.365421e-55	1.497606e-52
MsG0380013945.01	MsG0380014034.01	0.827171	1.812940e-54	1.736662e-51
MsG0380013947.01	MsG0380014034.01	0.819387	1.192907e-52	9.166111e-50
MsG0380013948.01	MsG0380014034.01	0.828035	1.124488e-54	1.104697e-51
MsG0380013949.01	MsG0380014034.01	0.802101	6.580980e-49	3.196099e-46
MsG0380013951.01	MsG0380014034.01	0.827459	1.546077e-54	1.493587e-51
MsG0380013952.01	MsG0380014034.01	0.905601	3.612041e-80	5.884271e-76
MsG0380013953.01	MsG0380014034.01	0.800242	1.580038e-48	7.320447e-46
MsG0380013956.01	MsG0380014034.01	0.834286	3.271818e-56	3.865321e-53
MsG0380013957.01	MsG0380014034.01	0.802698	4.959451e-49	2.445567e-46
MsG0380013958.01	MsG0380014034.01	0.817314	3.516357e-52	2.552045e-49
MsG0380013959.01	MsG0380014034.01	0.825238	5.227915e-54	4.738186e-51
MsG0380013961.01	MsG0380014034.01	0.801749	7.773442e-49	3.741511e-46
MsG0380013962.01	MsG0380014034.01	0.825423	4.725706e-54	4.305384e-51
MsG0380013963.01	MsG0380014034.01	0.820915	5.328312e-53	4.272491e-50
MsG0380013964.01	MsG0380014034.01	0.849610	2.894729e-60	5.518601e-57
MsG0380013966.01	MsG0380014034.01	0.859614	3.661057e-63	9.726964e-60
MsG0380013967.01	MsG0380014034.01	0.808432	3.105859e-50	1.775645e-47
MsG0380013968.01	MsG0380014034.01	0.820097	8.211785e-53	6.437230e-50
MsG0380013969.01	MsG0380014034.01	0.906982	8.286336e-81	1.438823e-76
MsG0380013971.01	MsG0380014034.01	0.837372	5.404809e-57	7.005891e-54
MsG0380013972.01	MsG0380014034.01	0.877851	4.511054e-69	2.303273e-65
MsG0380013975.01	MsG0380014034.01	0.834746	2.508407e-56	3.003969e-53
MsG0380013976.01	MsG0380014034.01	0.828459	8.885508e-55	8.837636e-52
MsG0380013977.01	MsG0380014034.01	0.820487	6.684009e-53	5.295864e-50
MsG0380013978.01	MsG0380014034.01	0.852876	3.461632e-61	7.338348e-58
MsG0380013979.01	MsG0380014034.01	0.842275	2.855426e-58	4.307397e-55
MsG0380013980.01	MsG0380014034.01	0.839555	1.477701e-57	2.047773e-54
MsG0380013981.01	MsG0380014034.01	0.871176	8.340371e-67	3.332029e-63
MsG0380013983.01	MsG0380014034.01	0.881428	2.421033e-70	1.417864e-66
MsG0380013985.01	MsG0380014034.01	0.800249	1.574450e-48	7.296070e-46
MsG0380013992.01	MsG0380014034.01	0.801275	9.723999e-49	4.624790e-46
MsG0380013995.01	MsG0380014034.01	0.853954	1.697680e-61	3.731956e-58
MsG0380013999.01	MsG0380014034.01	0.827831	1.259124e-54	1.229461e-51
MsG0380014004.01	MsG0380014034.01	0.819993	8.672831e-53	6.778470e-50
MsG0380014005.01	MsG0380014034.01	0.828625	8.100781e-55	8.095821e-52
MsG0380014008.01	MsG0380014034.01	0.816307	5.916899e-52	4.177862e-49
MsG0380014009.01	MsG0380014034.01	0.810887	9.218635e-51	5.624186e-48
MsG0380014017.01	MsG0380014034.01	0.816127	6.489394e-52	4.559374e-49
MsG0380014018.01	MsG0380014034.01	0.805736	1.156124e-49	6.163884e-47
MsG0380014020.01	MsG0380014034.01	0.813175	2.924177e-51	1.895824e-48
MsG0380014023.01	MsG0380014034.01	0.854120	1.521115e-61	3.362400e-58
MsG0380014024.01	MsG0380014034.01	0.837433	5.212732e-57	6.770197e-54
MsG0380014026.01	MsG0380014034.01	0.841803	3.807027e-58	5.657480e-55
MsG0380014027.01	MsG0380014034.01	0.816013	6.881876e-52	4.820165e-49
MsG0380014028.01	MsG0380014034.01	0.847840	8.964082e-60	1.613851e-56
MsG0380014030.01	MsG0380014034.01	0.817681	2.906388e-52	2.130734e-49
MsG0380014032.01	MsG0380014034.01	0.826869	2.140768e-54	2.032545e-51
MsG0380014033.01	MsG0380014034.01	0.818244	2.168284e-52	1.614303e-49
MsG0380014034.01	MsG0380014035.01	0.865138	7.340877e-65	2.363019e-61
MsG0380014034.01	MsG0380014036.01	0.840360	9.111061e-58	1.294671e-54
MsG0380014034.01	MsG0380014039.01	0.820362	7.139326e-53	5.637049e-50
MsG0380014034.01	MsG0380014040.01	0.826928	2.072540e-54	1.971348e-51
MsG0380014034.01	MsG0380014041.01	0.817319	3.507780e-52	2.546141e-49
MsG0380014034.01	MsG0380014050.01	0.855534	5.916442e-62	1.370230e-58
MsG0380014034.01	MsG0380014051.01	0.842474	2.529311e-58	3.839830e-55
MsG0380014034.01	MsG0380014054.01	0.801419	9.086945e-49	4.337436e-46
MsG0380014034.01	MsG0380014055.01	0.818074	2.370053e-52	1.756268e-49
MsG0380014034.01	MsG0380014057.01	0.818970	1.484096e-52	1.127467e-49
MsG0380014034.01	MsG0380015348.01	0.809463	1.868891e-50	1.097994e-47
MsG0380014034.01	MsG0380015439.01	0.809149	2.182108e-50	1.271369e-47
MsG0380014034.01	MsG0380016424.01	0.808808	2.581296e-50	1.490236e-47
MsG0380014034.01	MsG0380016531.01	0.801961	7.033767e-49	3.403719e-46
MsG0380014034.01	MsG0380017007.01	0.832367	9.843136e-56	1.097864e-52
MsG0380014034.01	MsG0480018296.01	0.843473	1.371087e-58	2.147534e-55
MsG0380014034.01	MsG0480019861.01	0.812794	3.543150e-51	2.273835e-48
MsG0380014034.01	MsG0480022296.01	0.824989	5.985964e-54	5.387060e-51
MsG0380014034.01	MsG0580027677.01	0.847095	1.436056e-59	2.524907e-56
MsG0380014034.01	MsG0680032339.01	0.830353	3.080663e-55	3.237851e-52
MsG0380014034.01	MsG0780037988.01	0.824115	9.614970e-54	8.438206e-51
MsG0380014034.01	MsG0780038197.01	0.817379	3.400678e-52	2.472603e-49
MsG0380014034.01	MsG0780039596.01	0.813482	2.503583e-51	1.636949e-48
MsG0380014034.01	MsG0780039859.01	0.808157	3.554398e-50	2.017456e-47
MsG0380014034.01	MsG0780039860.01	0.801473	8.857432e-49	4.233731e-46
MsG0380014034.01	MsG0780040315.01	0.804469	2.128450e-49	1.098286e-46
MsG0380014034.01	MsG0780040316.01	0.877339	6.802842e-69	3.408679e-65
MsG0380014034.01	MsG0780040317.01	0.862827	3.845189e-64	1.141673e-60
MsG0380014034.01	MsG0780041106.01	0.803656	3.141025e-49	1.587278e-46
MsG0380014034.01	MsG0780041768.01	0.810256	1.261644e-50	7.568683e-48
MsG0380014034.01	MsG0780041792.01	0.803076	4.141673e-49	2.061948e-46
MsG0380014034.01	MsG0880044440.01	0.863376	2.601786e-64	7.870259e-61
MsG0380014034.01	MsG0880045188.01	0.812261	4.633601e-51	2.932259e-48
MsG0380014034.01	MsG0880045252.01	0.802325	5.919072e-49	2.891307e-46
MsG0280007026.01	MsG0380014034.01	0.812196	4.787919e-51	3.024538e-48
MsG0280007041.01	MsG0380014034.01	0.814490	1.500415e-51	1.008237e-48
MsG0280007042.01	MsG0380014034.01	0.862810	3.892679e-64	1.155147e-60
MsG0280007136.01	MsG0380014034.01	0.800733	1.255021e-48	5.887534e-46
MsG0280010137.01	MsG0380014034.01	0.859761	3.306142e-63	8.829793e-60
MsG0280010143.01	MsG0380014034.01	0.823235	1.545177e-53	1.322818e-50
MsG0280010145.01	MsG0380014034.01	0.823984	1.031775e-53	9.021898e-51
MsG0280010281.01	MsG0380014034.01	0.810140	1.336699e-50	7.994504e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014034.01.T01	MTR_4g050810	84.892	139	1	1	1	119	46	184	2.19e-74	224
MsG0380014034.01.T01	MTR_7g021700	81.379	145	1	1	1	119	317	461	5.93e-70	221
MsG0380014034.01.T01	MTR_4g006100	84.892	139	1	1	1	119	587	725	8.67e-69	222
MsG0380014034.01.T01	MTR_6g042200	97.778	90	2	0	1	90	587	676	3.43e-51	172
MsG0380014034.01.T01	MTR_4g451555	92.958	71	5	0	15	85	13	83	3.19e-40	130
MsG0380014034.01.T02	MTR_4g050810	75.352	142	1	1	1	108	43	184	4.49e-65	200
MsG0380014034.01.T02	MTR_7g021700	72.297	148	1	1	1	108	314	461	5.75e-61	197
MsG0380014034.01.T02	MTR_4g006100	75.352	142	1	1	1	108	584	725	5.06e-60	197
MsG0380014034.01.T02	MTR_6g042200	98.765	81	1	0	1	81	584	664	2.62e-46	158
MsG0380014034.01.T02	MTR_4g451555	92.188	64	5	0	18	81	13	76	6.39e-35	116
MsG0380014034.01.T03	MTR_4g050810	79.048	105	0	1	1	83	80	184	1.22e-46	152
MsG0380014034.01.T03	MTR_4g006100	79.048	105	0	1	1	83	621	725	9.40e-44	150
MsG0380014034.01.T03	MTR_7g021700	74.775	111	0	1	1	83	351	461	1.35e-43	149
MsG0380014034.01.T03	MTR_4g451555	97.727	44	1	0	1	44	33	76	8.58e-23	84.3
MsG0380014034.01.T03	MTR_6g042200	68.919	74	1	1	1	52	621	694	7.63e-21	85.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014034.01.T01	ATCG01100	78.667	150	15	2	1	133	211	360	2.27e-72	220
MsG0380014034.01.T04	ATCG01100	96.774	31	1	0	1	31	330	360	2.72e-12	58.2
MsG0380014034.01.T02	ATCG01100	74.510	153	8	1	1	122	208	360	4.37e-69	211
MsG0380014034.01.T03	ATCG01100	76.724	116	8	1	1	97	245	360	5.36e-49	159

Find 23 sgRNAs with CRISPR-Local

Find 30 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAAATTAAAAGGTTTAAAT+AGG	0.230364	3:+48705499	None:intergenic
CAAATAATGAAGAAATTAAA+AGG	0.264621	3:+48705489	None:intergenic
ACTAATTCTTCTTCTGCTTC+TGG	0.274188	3:+48705578	None:intergenic
AGTTGATGCGCAATCAAATA+TGG	0.304070	3:-48705695	None:intergenic
AATAGATTACCGAGAGAAAT+AGG	0.305666	3:+48705243	None:intergenic
GAATATTCGGGTATTCGATT+TGG	0.315991	3:-48705539	MsG0380014034.01.T01:CDS
GGGTTATCAAACAGAATATT+CGG	0.333132	3:-48705552	MsG0380014034.01.T01:CDS
TTTGAAATCAATAAAACATA+TGG	0.341365	3:-48705404	MsG0380014034.01.T01:intron
ATGGATCAATTATTAAATCT+TGG	0.351344	3:-48705282	MsG0380014034.01.T01:CDS
ATTTGTAACAGTTCTTTACT+TGG	0.416318	3:-48705471	MsG0380014034.01.T01:CDS
TCTGCTTCTGGTAAATCAAA+AGG	0.441932	3:+48705590	None:intergenic
ATCAATTATTAAATCTTGGA+TGG	0.477077	3:-48705278	MsG0380014034.01.T01:CDS
GGTTATCAAACAGAATATTC+GGG	0.492242	3:-48705551	MsG0380014034.01.T01:CDS
GTCTTTGCCTAGGCTAAGAA+TGG	0.495418	3:-48705301	MsG0380014034.01.T01:CDS
TTTGTAACAGTTCTTTACTT+GGG	0.522545	3:-48705470	MsG0380014034.01.T01:CDS
TCGTTTCTATCATAACAAGA+TGG	0.528862	3:-48705323	MsG0380014034.01.T01:CDS
AATTGATCCATTCTTAGCCT+AGG	0.530223	3:+48705294	None:intergenic
AACTCAGAAACGAATATGTA+CGG	0.547502	3:+48705428	None:intergenic
GCAGAAGAAGAATTAGTAGC+GGG	0.560096	3:-48705572	MsG0380014034.01.T01:CDS
TAACAAGATGGTCTTTGCCT+AGG	0.562717	3:-48705311	MsG0380014034.01.T01:CDS
AATTTGTGGCGTCAACCTAT+CGG	0.570074	3:-48705659	MsG0380014034.01.T02:CDS
GTAACAGTTCTTTACTTGGG+CGG	0.607549	3:-48705467	MsG0380014034.01.T01:CDS
AGCAGAAGAAGAATTAGTAG+CGG	0.641363	3:-48705573	MsG0380014034.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGAAATTAAAAGGTTTAAAT+AGG	+	Chr3:48705403-48705422	None:intergenic	15.0%
!!	CAAATAATGAAGAAATTAAA+AGG	+	Chr3:48705413-48705432	None:intergenic	15.0%
!!!	TTTGAAATCAATAAAACATA+TGG	-	Chr3:48705495-48705514	MsG0380014034.01.T01:CDS	15.0%
!!	ATCAATTATTAAATCTTGGA+TGG	-	Chr3:48705621-48705640	MsG0380014034.01.T01:CDS	20.0%
!!	ATGGATCAATTATTAAATCT+TGG	-	Chr3:48705617-48705636	MsG0380014034.01.T01:CDS	20.0%
!	ATTTGTAACAGTTCTTTACT+TGG	-	Chr3:48705428-48705447	MsG0380014034.01.T01:CDS	25.0%
!	TTTGTAACAGTTCTTTACTT+GGG	-	Chr3:48705429-48705448	MsG0380014034.01.T01:CDS	25.0%
!!	CAATAAAACATATGGAGTTT+TGG	-	Chr3:48705503-48705522	MsG0380014034.01.T01:CDS	25.0%
!!!	TTTCTTTTACCTATTTCTCT+CGG	-	Chr3:48705647-48705666	MsG0380014034.01.T01:CDS	25.0%
	AACTCAGAAACGAATATGTA+CGG	+	Chr3:48705474-48705493	None:intergenic	30.0%
	AATAGATTACCGAGAGAAAT+AGG	+	Chr3:48705659-48705678	None:intergenic	30.0%
	AGAAAAACAATGAAACCGAT+AGG	+	Chr3:48705258-48705277	None:intergenic	30.0%
	GGGTTATCAAACAGAATATT+CGG	-	Chr3:48705347-48705366	MsG0380014034.01.T01:intron	30.0%
	GGTTATCAAACAGAATATTC+GGG	-	Chr3:48705348-48705367	MsG0380014034.01.T01:intron	30.0%
	TCGTTTCTATCATAACAAGA+TGG	-	Chr3:48705576-48705595	MsG0380014034.01.T01:CDS	30.0%
!	CGCAATCAAATATGGTTTTT+GGG	-	Chr3:48705212-48705231	MsG0380014034.01.T01:CDS	30.0%
!	GCAATCAAATATGGTTTTTG+GGG	-	Chr3:48705213-48705232	MsG0380014034.01.T01:CDS	30.0%
	AATTGATCCATTCTTAGCCT+AGG	+	Chr3:48705608-48705627	None:intergenic	35.0%
	ACTAATTCTTCTTCTGCTTC+TGG	+	Chr3:48705324-48705343	None:intergenic	35.0%
	AGCAGAAGAAGAATTAGTAG+CGG	-	Chr3:48705326-48705345	MsG0380014034.01.T01:CDS	35.0%
	GAATATTCGGGTATTCGATT+TGG	-	Chr3:48705360-48705379	MsG0380014034.01.T01:intron	35.0%
	TCTGCTTCTGGTAAATCAAA+AGG	+	Chr3:48705312-48705331	None:intergenic	35.0%
!	GCGCAATCAAATATGGTTTT+TGG	-	Chr3:48705211-48705230	MsG0380014034.01.T01:CDS	35.0%
!!	TCAAATATGGTTTTTGGGGA+TGG	-	Chr3:48705217-48705236	MsG0380014034.01.T01:CDS	35.0%
	AATTTGTGGCGTCAACCTAT+CGG	-	Chr3:48705240-48705259	MsG0380014034.01.T01:CDS	40.0%
	GCAGAAGAAGAATTAGTAGC+GGG	-	Chr3:48705327-48705346	MsG0380014034.01.T01:intron	40.0%
	GTAACAGTTCTTTACTTGGG+CGG	-	Chr3:48705432-48705451	MsG0380014034.01.T01:CDS	40.0%
	TAACAAGATGGTCTTTGCCT+AGG	-	Chr3:48705588-48705607	MsG0380014034.01.T01:CDS	40.0%
!!	GTTTTTGGGGATGGAATTTG+TGG	-	Chr3:48705226-48705245	MsG0380014034.01.T01:CDS	40.0%
	GTCTTTGCCTAGGCTAAGAA+TGG	-	Chr3:48705598-48705617	MsG0380014034.01.T01:CDS	45.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	48705209	48705712	48705209	ID=MsG0380014034.01;Name=MsG0380014034.01
Chr3	mRNA	48705209	48705669	48705209	ID=MsG0380014034.01.T01;Parent=MsG0380014034.01;Name=MsG0380014034.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|0\|0\|1\|0\|0\|2\|0\|133
Chr3	exon	48705209	48705345	48705209	ID=MsG0380014034.01.T01:exon:57101;Parent=MsG0380014034.01.T01
Chr3	exon	48705405	48705669	48705405	ID=MsG0380014034.01.T01:exon:57100;Parent=MsG0380014034.01.T01
Chr3	CDS	48705405	48705669	48705405	ID=MsG0380014034.01.T01:cds;Parent=MsG0380014034.01.T01
Chr3	CDS	48705209	48705345	48705209	ID=MsG0380014034.01.T01:cds;Parent=MsG0380014034.01.T01
Chr3	mRNA	48705209	48705678	48705209	ID=MsG0380014034.01.T02;Parent=MsG0380014034.01;Name=MsG0380014034.01.T02;_AED=0.50;_eAED=0.50;_QI=0\|0\|0\|1\|0\|0\|2\|0\|122
Chr3	exon	48705209	48705333	48705209	ID=MsG0380014034.01.T02:exon:57103;Parent=MsG0380014034.01.T02
Chr3	exon	48705435	48705678	48705435	ID=MsG0380014034.01.T02:exon:57102;Parent=MsG0380014034.01.T02
Chr3	CDS	48705435	48705678	48705435	ID=MsG0380014034.01.T02:cds;Parent=MsG0380014034.01.T02
Chr3	CDS	48705209	48705333	48705209	ID=MsG0380014034.01.T02:cds;Parent=MsG0380014034.01.T02
Chr3	mRNA	48705209	48705567	48705209	ID=MsG0380014034.01.T03;Parent=MsG0380014034.01;Name=MsG0380014034.01.T03;_AED=0.50;_eAED=0.50;_QI=0\|0\|0\|1\|0\|0\|2\|0\|97
Chr3	exon	48705209	48705369	48705209	ID=MsG0380014034.01.T03:exon:57105;Parent=MsG0380014034.01.T03
Chr3	exon	48705435	48705567	48705435	ID=MsG0380014034.01.T03:exon:57104;Parent=MsG0380014034.01.T03
Chr3	CDS	48705435	48705567	48705435	ID=MsG0380014034.01.T03:cds;Parent=MsG0380014034.01.T03
Chr3	CDS	48705209	48705369	48705209	ID=MsG0380014034.01.T03:cds;Parent=MsG0380014034.01.T03
Chr3	mRNA	48705209	48705304	48705209	ID=MsG0380014034.01.T04;Parent=MsG0380014034.01;Name=MsG0380014034.01.T04;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|31
Chr3	exon	48705209	48705304	48705209	ID=MsG0380014034.01.T04:exon:57106;Parent=MsG0380014034.01.T04
Chr3	CDS	48705209	48705304	48705209	ID=MsG0380014034.01.T04:cds;Parent=MsG0380014034.01.T04
Chr3	mRNA	48705620	48705712	48705620	ID=MsG0380014034.01.T05;Parent=MsG0380014034.01;Name=MsG0380014034.01.T05;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|30
Chr3	exon	48705620	48705712	48705620	ID=MsG0380014034.01.T05:exon:57107;Parent=MsG0380014034.01.T05
Chr3	CDS	48705620	48705712	48705620	ID=MsG0380014034.01.T05:cds;Parent=MsG0380014034.01.T05
Chr3	mRNA	48705620	48705685	48705620	ID=MsG0380014034.01.T06;Parent=MsG0380014034.01;Name=MsG0380014034.01.T06;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|21
Chr3	exon	48705620	48705685	48705620	ID=MsG0380014034.01.T06:exon:57108;Parent=MsG0380014034.01.T06
Chr3	CDS	48705620	48705685	48705620	ID=MsG0380014034.01.T06:cds;Parent=MsG0380014034.01.T06

Gene Sequence

>MsG0380014034.01.T01

CAACCTATCGGTTTCATTGTTTTTCTAATTTCTTCACTAGCAGAATGTGAAAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACAGAATATTCGGGTATTCGATTTGGTTTATTTTACGTTGCTTCCTATTTAAACCTTTTAATTTCTTCATTATTTGTAACAGTTCTTTACTTGGGCGGTTCAAATATCTCTATTCCGTACATATTCGTTTCTGAGTTTTTTGAAATCAATAAAACATATGTCGTTTCTATCATAACAAGATGGTCTTTGCCTAGGCTAAGAATGGATCAATTATTAAATCTTGGATGGAAATTTCTTTTACCTATTTCTCTCGGTAATCTATTATTAACAACTTCGTCTCAATTGTTTTCACTGTAA

>MsG0380014034.01.T04

ATGGATCAATTATTAAATCTTGGATGGAAATTTCTTTTACCTATTTCTCTCGGTAATCTATTATTAACAACTTCGTCTCAATTGTTTTCACTGTAA

>MsG0380014034.01.T02

TTGTGGCGTCAACCTATCGGTTTCATTGTTTTTCTAATTTCTTCACTAGCAGAATGTGAAAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTAGCGGGTTATCAAACAGAATATTCGGGTATTCGATTTGGTTTATTTTACGTTGCTTCCTATTTAAACCTTTTAATTTCTTCATTATTTGTAACAGTTCTTTACTTGGGCGGTTCAAATATCTCTATTCCGTACATATTCGTTTTAACAAGATGGTCTTTGCCTAGGCTAAGAATGGATCAATTATTAAATCTTGGATGGAAATTTCTTTTACCTATTTCTCTCGGTAATCTATTATTAACAACTTCGTCTCAATTGTTTTCACTGTAA

>MsG0380014034.01.T03

CAAACAGAATATTCGGGTATTCGATTTGGTTTATTTTACGTTGCTTCCTATTTAAACCTTTTAATTTCTTCATTATTTGTAACAGTTCTTTACTTGGGCGGTTCAAATATCTCTATTCCGTACATATTCGTTTTAGCTAAAACTTATTTTTTCTTATTCGTTTCTATCATAACAAGATGGTCTTTGCCTAGGCTAAGAATGGATCAATTATTAAATCTTGGATGGAAATTTCTTTTACCTATTTCTCTCGGTAATCTATTATTAACAACTTCGTCTCAATTGTTTTCACTGTAA

>MsG0380014034.01.T05

ATGCGCAATCAAATATGGTTTTTGGGGATGGAATTTGTGGCGTCAACCTATCGGTTTCATTGTTTTTCTAATTTCTTCACTAGCAGAATGTGA

>MsG0380014034.01.T06

ATGGAATTTGTGGCGTCAACCTATCGGTTTCATTGTTTTTCTAATTTCTTCACTAGCAGAATGTGA

Protein sequence

>MsG0380014034.01.T01

QPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIRFGLFYVASYLNLLISSLFVTVLYLGGSNISIPYIFVSEFFEINKTYVVSIITRWSLPRLRMDQLLNLGWKFLLPISLGNLLLTTSSQLFSL*

>MsG0380014034.01.T04

MDQLLNLGWKFLLPISLGNLLLTTSSQLFSL*

>MsG0380014034.01.T02

LWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIRFGLFYVASYLNLLISSLFVTVLYLGGSNISIPYIFVLTRWSLPRLRMDQLLNLGWKFLLPISLGNLLLTTSSQLFSL*

>MsG0380014034.01.T03

QTEYSGIRFGLFYVASYLNLLISSLFVTVLYLGGSNISIPYIFVLAKTYFFLFVSIITRWSLPRLRMDQLLNLGWKFLLPISLGNLLLTTSSQLFSL*

>MsG0380014034.01.T05

MRNQIWFLGMEFVASTYRFHCFSNFFTSRM*

>MsG0380014034.01.T06

MEFVASTYRFHCFSNFFTSRM*