AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009101.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009101.01.T01 MTR_2g054130 79.946 369 23 4 1 318 1 369 0.0 568
MsG0280009101.01.T01 MTR_2g055010 82.571 350 13 2 1 302 1 350 0.0 567
MsG0280009101.01.T01 MTR_7g104650 32.653 147 71 4 176 297 115 258 1.79e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009101.01.T01 AT5G20140 59.661 295 71 2 55 301 51 345 9.21e-120 352
MsG0280009101.01.T01 AT5G20140 57.778 315 82 4 55 318 51 365 1.71e-119 351

Find 99 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTCACAGGTATATATT+TGG 0.154800 2:+45308828 MsG0280009101.01.T01:intron
AAATCATCATGCTTAGTAAT+TGG 0.154857 2:-45306757 None:intergenic
CTACAACTTGCACCACTTTC+CGG 0.208753 2:+45306491 MsG0280009101.01.T01:CDS
CAGACCATCTTTAATGATAT+TGG 0.210028 2:-45309384 None:intergenic
TTCAACTAAGCTCAGATTAA+TGG 0.251072 2:-45306605 None:intergenic
AAGCTAACTGTTTCTTGATT+AGG 0.251086 2:-45309269 None:intergenic
ACAAATGGAGACAAGCTATC+TGG 0.265343 2:+45308695 MsG0280009101.01.T01:CDS
TGTCTGATGGAAGAACTATT+TGG 0.281044 2:-45308935 None:intergenic
ACTGTTTCTTGATTAGGATT+TGG 0.296904 2:-45309263 None:intergenic
AAACCAGAATTGGTCTTTAC+AGG 0.303338 2:+45307786 MsG0280009101.01.T01:CDS
GTTCCTGTAAAGACCAATTC+TGG 0.315384 2:-45307789 None:intergenic
CTTTACAGGAACATCTGTTA+TGG 0.331343 2:+45307800 MsG0280009101.01.T01:CDS
ATGGGTGTTAACCCAGAAAA+TGG 0.339771 2:+45307819 MsG0280009101.01.T01:CDS
TCCCCACCTCTTTGATGATA+AGG 0.342854 2:+45306690 MsG0280009101.01.T01:CDS
CCCCACCTCTTTGATGATAA+GGG 0.343146 2:+45306691 MsG0280009101.01.T01:CDS
CACCGAACCTTCAACCTTTG+AGG 0.344346 2:-45312463 None:intergenic
AACTATTTGGATTGAGACTT+TGG 0.355211 2:-45308922 None:intergenic
TACGGTGTCTCCGTGGTGGC+TGG 0.372285 2:-45306561 None:intergenic
CTCTTTGTTTCTTTGTCTGA+TGG 0.379732 2:-45308948 None:intergenic
CATCTTGTAGTTATTTCATA+AGG 0.386402 2:-45307729 None:intergenic
AGCCTCAGTTTCAGTTGCAT+TGG 0.396587 2:+45306824 MsG0280009101.01.T01:CDS
ACCGGCTTTAATGATGTTGC+TGG 0.397252 2:+45308722 MsG0280009101.01.T01:CDS
TTTACAGGAACATCTGTTAT+GGG 0.408859 2:+45307801 MsG0280009101.01.T01:CDS
CAATTATTTGTTACGTGGCC+AGG 0.415904 2:+45306420 None:intergenic
GCCTCAGTTTCAGTTGCATT+GGG 0.419471 2:+45306825 MsG0280009101.01.T01:CDS
GCTGCAGTAATAAAGTTTAG+TGG 0.421311 2:+45309314 MsG0280009101.01.T01:CDS
AATCATCATGCTTAGTAATT+GGG 0.426244 2:-45306756 None:intergenic
CGCTCCAATATCATTAAAGA+TGG 0.429781 2:+45309380 MsG0280009101.01.T01:CDS
GCTTCCATGGAAACCAGAAT+TGG 0.431262 2:+45307776 MsG0280009101.01.T01:CDS
GTGGTGCAAGTTGTAGGAAA+TGG 0.442861 2:-45306484 None:intergenic
GTTAGCTTGAGAAAGGTAGA+AGG 0.445389 2:+45309284 MsG0280009101.01.T01:CDS
AACCTCAAAGGTTGAAGGTT+CGG 0.447345 2:+45312461 MsG0280009101.01.T01:CDS
CGGAAAGTGGTGCAAGTTGT+AGG 0.450152 2:-45306490 None:intergenic
TCAGTTGCATTGGGTTAAAC+CGG 0.455907 2:+45306834 MsG0280009101.01.T01:CDS
TGAAATTCATGCTGCTTCCA+TGG 0.477688 2:+45307763 MsG0280009101.01.T01:CDS
CAAATGGAGACAAGCTATCT+GGG 0.479821 2:+45308696 MsG0280009101.01.T01:CDS
TTCGCGAACAATATCCTCCA+TGG 0.485927 2:-45309342 None:intergenic
TTCACTATCTTCCGTTTCCA+TGG 0.487240 2:+45306444 MsG0280009101.01.T01:exon
AAGACCAATTCTGGTTTCCA+TGG 0.488831 2:-45307780 None:intergenic
GGAGGATATTGTTCGCGAAA+AGG 0.499867 2:+45309346 MsG0280009101.01.T01:CDS
TGGTGCAAGTTGTAGGAAAT+GGG 0.500255 2:-45306483 None:intergenic
TTCGTAGTAGTAGAAACAAA+TGG 0.502411 2:+45308680 MsG0280009101.01.T01:CDS
GACAAGCTATCTGGGAATAC+CGG 0.516068 2:+45308704 MsG0280009101.01.T01:CDS
AGAAACAGTTAGCTTGAGAA+AGG 0.518821 2:+45309277 MsG0280009101.01.T01:CDS
AATGAAAGTGGCCATGGAAA+CGG 0.522227 2:-45306455 None:intergenic
TTTGTTTCTACTACTACGAA+TGG 0.522785 2:-45308677 None:intergenic
TCGAGATGCCCATCGAATGT+TGG 0.530530 2:-45313164 None:intergenic
GGAGGTTGGTCGCCGGAAAG+TGG 0.531539 2:-45306503 None:intergenic
TCGATGGCTTGAGTGAATAC+AGG 0.531601 2:-45308888 None:intergenic
ATTCAAACTTGCTAAGCAGC+AGG 0.535455 2:-45313251 None:intergenic
TCGATGGGCATCTCGAACGA+TGG 0.535921 2:+45313171 MsG0280009101.01.T01:CDS
AGAGTAGTTGTGGATGTTGA+AGG 0.536229 2:-45306527 None:intergenic
ACCCTTATCATCAAAGAGGT+GGG 0.541717 2:-45306692 None:intergenic
TCGAGATGACCATCGAATGT+TGG 0.542871 2:+45313225 MsG0280009101.01.T01:CDS
GGCAGGTCTCCAACATTCGA+TGG 0.543206 2:+45313155 MsG0280009101.01.T01:intron
GAAGAAGTGGAGAGTAGTTG+TGG 0.543985 2:-45306537 None:intergenic
TCGCGAACAATATCCTCCAT+GGG 0.547839 2:-45309341 None:intergenic
TACCCTTATCATCAAAGAGG+TGG 0.556746 2:-45306693 None:intergenic
CATCGGTATCTTCTCTGCTG+TGG 0.557509 2:-45308859 None:intergenic
CGTGGTGGCTGGAGAAGAAG+TGG 0.560248 2:-45306550 None:intergenic
ACCCAATGCAACTGAAACTG+AGG 0.565595 2:-45306826 None:intergenic
CCCAGCAACATCATTAAAGC+CGG 0.567439 2:-45308723 None:intergenic
CTTATGAAATAACTACAAGA+TGG 0.569482 2:+45307730 MsG0280009101.01.T01:CDS
TGGATGTTGAAGGCGGAGGT+TGG 0.570197 2:-45306517 None:intergenic
GGTATTCAAGTGTCAAGGAA+TGG 0.576161 2:+45313192 MsG0280009101.01.T01:CDS
CCGGCTTTAATGATGTTGCT+GGG 0.579992 2:+45308723 MsG0280009101.01.T01:CDS
CGACGTTCATGCACATTCAA+CGG 0.582747 2:+45312433 MsG0280009101.01.T01:CDS
AAAGTTTAGTGGAAAACCCA+TGG 0.583126 2:+45309325 MsG0280009101.01.T01:CDS
TGAAGGCGGAGGTTGGTCGC+CGG 0.586760 2:-45306510 None:intergenic
TGCATGAACGTCGATCCATC+CGG 0.589332 2:-45312423 None:intergenic
CACTTCTTCTCCAGCCACCA+CGG 0.591236 2:+45306551 MsG0280009101.01.T01:CDS
AGGAGAACCTCAAAGGTTGA+AGG 0.592418 2:+45312456 MsG0280009101.01.T01:CDS
AAACGGAAGATAGTGAATCC+TGG 0.598289 2:-45306438 None:intergenic
ACTAAGCATGATGATTTGAG+TGG 0.598452 2:+45306763 MsG0280009101.01.T01:CDS
GTTGTGGATGTTGAAGGCGG+AGG 0.602344 2:-45306521 None:intergenic
GTAGTTGTGGATGTTGAAGG+CGG 0.605157 2:-45306524 None:intergenic
GCAGGTCTCCAACATTCGAT+GGG 0.605286 2:+45313156 MsG0280009101.01.T01:intron
GCAAGCAAACAACCAGGCTG+AGG 0.606063 2:-45309410 None:intergenic
CCCTTATCATCAAAGAGGTG+GGG 0.608453 2:-45306691 None:intergenic
CATCAGACAAAGAAACAAAG+AGG 0.609686 2:+45308949 MsG0280009101.01.T01:CDS
GATGGTCTGAAACCTCAGCC+TGG 0.615097 2:+45309398 MsG0280009101.01.T01:CDS
ACGATGGTATTCAAGTGTCA+AGG 0.617179 2:+45313187 MsG0280009101.01.T01:CDS
CAGCATGAATTTCATAACCA+TGG 0.617626 2:-45307754 None:intergenic
AGCAGGACTCCAACATTCGA+TGG 0.618377 2:-45313234 None:intergenic
AAATGGGTGGAGAATGAAAG+TGG 0.618552 2:-45306467 None:intergenic
TTTGGACAAGTCAACATCGA+TGG 0.619340 2:-45308904 None:intergenic
GTGGAGAATGAAAGTGGCCA+TGG 0.621619 2:-45306461 None:intergenic
GATTTGAAACAATGGCCGGA+TGG 0.626644 2:+45312408 MsG0280009101.01.T01:intron
GTGAATACAGGAGTAGTCAT+CGG 0.628384 2:-45308876 None:intergenic
CGTAGATTTGAAACAATGGC+CGG 0.628847 2:+45312404 MsG0280009101.01.T01:intron
TCAACGGAGGAGAACCTCAA+AGG 0.639019 2:+45312449 MsG0280009101.01.T01:CDS
CAATACCCTTATCATCAAAG+AGG 0.646394 2:-45306696 None:intergenic
TGCAAGTTGTAGGAAATGGG+TGG 0.651128 2:-45306480 None:intergenic
AGCTTGAGAAAGGTAGAAGG+AGG 0.657758 2:+45309287 MsG0280009101.01.T01:CDS
TGTGCGTAGATTTGAAACAA+TGG 0.666341 2:+45312400 MsG0280009101.01.T01:intron
AATAACTACAAGATGGACCA+TGG 0.682550 2:+45307737 MsG0280009101.01.T01:CDS
GATGGTCATCTCGAACGATG+AGG 0.697311 2:-45313216 None:intergenic
CGTTCATGCACATTCAACGG+AGG 0.740884 2:+45312436 MsG0280009101.01.T01:CDS
GTTTAGTGGAAAACCCATGG+AGG 0.746638 2:+45309328 MsG0280009101.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAATCACATTAAAT+GGG + Chr2:45306582-45306601 MsG0280009101.01.T01:CDS 10.0%
!! TTTAACCATATAAAATAATT+AGG - Chr2:45309971-45309990 None:intergenic 10.0%
!!! AATTATTTTATATGGTTAAA+GGG + Chr2:45309971-45309990 MsG0280009101.01.T01:intron 10.0%
!!! ATTTAATGTGATTTTTTTTA+CGG - Chr2:45306582-45306601 None:intergenic 10.0%
!!! TAATTATTTTATATGGTTAA+AGG + Chr2:45309970-45309989 MsG0280009101.01.T01:intron 10.0%
!!! TTATTGGTTATATTTTAATT+TGG + Chr2:45312013-45312032 MsG0280009101.01.T01:intron 10.0%
!! ATAATATTGTATGAAAATCA+AGG - Chr2:45307506-45307525 None:intergenic 15.0%
!! ATTACATTAAAGAATTAAGA+GGG - Chr2:45310183-45310202 None:intergenic 15.0%
!! CCAAATATCAAATATTAAAA+CGG + Chr2:45308311-45308330 MsG0280009101.01.T01:intron 15.0%
!! GTAAAAAAAATCACATTAAA+TGG + Chr2:45306581-45306600 MsG0280009101.01.T01:CDS 15.0%
!! TTGTTTGTATAAAATATCAT+AGG - Chr2:45307313-45307332 None:intergenic 15.0%
!!! ACAAAATTTATTCTTTTCAA+AGG + Chr2:45312980-45312999 MsG0280009101.01.T01:intron 15.0%
!!! ACTAACCTAATTATTTTATA+TGG + Chr2:45309963-45309982 MsG0280009101.01.T01:intron 15.0%
!!! CGTTTTAATATTTGATATTT+GGG - Chr2:45308313-45308332 None:intergenic 15.0%
!!! TGATTTTCATACAATATTAT+AGG + Chr2:45307506-45307525 MsG0280009101.01.T01:intron 15.0%
!!! TGTTATAGTTTAAAGTTTAT+TGG + Chr2:45311997-45312016 MsG0280009101.01.T01:intron 15.0%
!!! TTATCTATGGTTTTAAATTT+TGG + Chr2:45307888-45307907 MsG0280009101.01.T01:intron 15.0%
!!! TTTAGGGTTATTTTTTAATT+TGG + Chr2:45312162-45312181 MsG0280009101.01.T01:intron 15.0%
!!! TTTTAGACAATTACATTTTA+GGG + Chr2:45312281-45312300 MsG0280009101.01.T01:intron 15.0%
!!! TTTTCAGCTTATTTATATAT+AGG + Chr2:45306968-45306987 MsG0280009101.01.T01:intron 15.0%
!!! TTTTTAGACAATTACATTTT+AGG + Chr2:45312280-45312299 MsG0280009101.01.T01:intron 15.0%
!! AAAAAATAATAGTGTACAGT+AGG + Chr2:45310774-45310793 MsG0280009101.01.T01:intron 20.0%
!! AATGTAATAATCACATATGT+TGG - Chr2:45307477-45307496 None:intergenic 20.0%
!! ATAAATTATCTTCAGATACA+AGG + Chr2:45310662-45310681 MsG0280009101.01.T01:intron 20.0%
!! ATATAAATAAGCTGAAAACA+TGG - Chr2:45306966-45306985 None:intergenic 20.0%
!! ATATCAAAAGTTAACACAAA+AGG + Chr2:45308512-45308531 MsG0280009101.01.T01:intron 20.0%
!! CATTACATTAAAGAATTAAG+AGG - Chr2:45310184-45310203 None:intergenic 20.0%
!! CTTAAAATTACTATATAAGC+TGG - Chr2:45310286-45310305 None:intergenic 20.0%
!! TATAACAAAAAGAAAATGCT+CGG + Chr2:45309540-45309559 MsG0280009101.01.T01:intron 20.0%
!! TTAACCACTTATAGTATTAT+CGG - Chr2:45307161-45307180 None:intergenic 20.0%
!! TTAGAGACTAGTAAATAAAA+GGG + Chr2:45309654-45309673 MsG0280009101.01.T01:intron 20.0%
!!! AATGACTATTTTTCATTTGA+AGG + Chr2:45308122-45308141 MsG0280009101.01.T01:intron 20.0%
!!! CAGCTTATATAGTAATTTTA+AGG + Chr2:45310284-45310303 MsG0280009101.01.T01:intron 20.0%
!!! CCGTTTTAATATTTGATATT+TGG - Chr2:45308314-45308333 None:intergenic 20.0%
!!! GTGATTTTGTTGAATAAATT+TGG - Chr2:45311830-45311849 None:intergenic 20.0%
!!! TATGGATTTTCTTAGAATTT+GGG + Chr2:45310209-45310228 MsG0280009101.01.T01:intron 20.0%
!!! TGAATTCATTGTTTTTTTGA+TGG + Chr2:45308631-45308650 MsG0280009101.01.T01:intron 20.0%
!!! TTGAGTCATATTCATTTTTT+TGG + Chr2:45307357-45307376 MsG0280009101.01.T01:intron 20.0%
!!! TTTTGTTGAATAAATTTGGT+TGG - Chr2:45311826-45311845 None:intergenic 20.0%
!!! TTTTTCATTTGAAGGTTTAT+TGG + Chr2:45308130-45308149 MsG0280009101.01.T01:intron 20.0%
! AAACCAAACCAAACTTATAA+GGG - Chr2:45311250-45311269 None:intergenic 25.0%
! AAATCATCATGCTTAGTAAT+TGG - Chr2:45306760-45306779 None:intergenic 25.0%
! AACATATGCTTAGTAAAGAA+AGG + Chr2:45309162-45309181 MsG0280009101.01.T01:intron 25.0%
! AAGAAGAAAAAAAATGCCAA+AGG - Chr2:45308199-45308218 None:intergenic 25.0%
! AATCATCATGCTTAGTAATT+GGG - Chr2:45306759-45306778 None:intergenic 25.0%
! ACAAAAGGATGTATCTTATA+TGG + Chr2:45308584-45308603 MsG0280009101.01.T01:intron 25.0%
! ACATGAATACTAATCTCTAA+TGG - Chr2:45309833-45309852 None:intergenic 25.0%
! ATATGACACATATTCATACA+AGG + Chr2:45310829-45310848 MsG0280009101.01.T01:intron 25.0%
! ATGAATACTAATCTCTAATG+GGG - Chr2:45309831-45309850 None:intergenic 25.0%
! ATTGTGTAAAAAACAGTGTA+AGG - Chr2:45309728-45309747 None:intergenic 25.0%
! ATTTATATATAGGCTCTGTT+TGG + Chr2:45306978-45306997 MsG0280009101.01.T01:intron 25.0%
! CATGAATACTAATCTCTAAT+GGG - Chr2:45309832-45309851 None:intergenic 25.0%
! CATGCATATTCAAAATCAAA+TGG - Chr2:45309504-45309523 None:intergenic 25.0%
! CTTAGAGACTAGTAAATAAA+AGG + Chr2:45309653-45309672 MsG0280009101.01.T01:intron 25.0%
! CTTATGAAATAACTACAAGA+TGG + Chr2:45307730-45307749 MsG0280009101.01.T01:CDS 25.0%
! GAAATCACAATAATGATAGA+TGG + Chr2:45307000-45307019 MsG0280009101.01.T01:intron 25.0%
! GTAGAAAAACTAAACCATAA+TGG - Chr2:45310121-45310140 None:intergenic 25.0%
! TAAAAAGACATTGGCAAATA+AGG + Chr2:45310717-45310736 MsG0280009101.01.T01:intron 25.0%
! TAAACCAAACCAAACTTATA+AGG - Chr2:45311251-45311270 None:intergenic 25.0%
! TAAATGAAGTGGTATTATGT+CGG + Chr2:45308044-45308063 MsG0280009101.01.T01:intron 25.0%
! TACACTGCAAAAATATAATG+TGG - Chr2:45310874-45310893 None:intergenic 25.0%
! TACTTCAAGTCAAAAACAAA+AGG + Chr2:45308569-45308588 MsG0280009101.01.T01:intron 25.0%
! TGAATAAATTTGGTTGGATT+TGG - Chr2:45311820-45311839 None:intergenic 25.0%
! TGTTAAAAATGTTCATTCAC+AGG + Chr2:45308817-45308836 MsG0280009101.01.T01:intron 25.0%
! TTAACCGATAATACTATAAG+TGG + Chr2:45307154-45307173 MsG0280009101.01.T01:intron 25.0%
! TTCATTCACAGGTATATATT+TGG + Chr2:45308828-45308847 MsG0280009101.01.T01:intron 25.0%
! TTCTTTACTAAGCATATGTT+TGG - Chr2:45309162-45309181 None:intergenic 25.0%
! TTTGAAGATGTGATGAATAA+TGG - Chr2:45311757-45311776 None:intergenic 25.0%
!! ATTGGTGTTTATAAATGAAG+TGG + Chr2:45308033-45308052 MsG0280009101.01.T01:intron 25.0%
!! CAAATTCTAAGAAAATCCAT+AGG - Chr2:45310210-45310229 None:intergenic 25.0%
!! CAAGAATTTAACCTTTTCAA+AGG - Chr2:45312874-45312893 None:intergenic 25.0%
!! CATCTTGTAGTTATTTCATA+AGG - Chr2:45307732-45307751 None:intergenic 25.0%
!! CTATGGATTTTCTTAGAATT+TGG + Chr2:45310208-45310227 MsG0280009101.01.T01:intron 25.0%
!! GTTAACTTTTGATATGTTTG+TGG - Chr2:45308507-45308526 None:intergenic 25.0%
!! TTGCAGTGTATACAATTTTA+AGG + Chr2:45310884-45310903 MsG0280009101.01.T01:intron 25.0%
!! TTTTACATGCCTACTATTTT+TGG - Chr2:45310702-45310721 None:intergenic 25.0%
!!! AATTATCTTACCTCTGAAAT+GGG + Chr2:45312790-45312809 MsG0280009101.01.T01:intron 25.0%
!!! AGATGAAATTTTTTACTGAC+TGG - Chr2:45310559-45310578 None:intergenic 25.0%
!!! ATTTTCTTAGAATTTGGGTT+GGG + Chr2:45310214-45310233 MsG0280009101.01.T01:intron 25.0%
!!! CATTTGATTTTGAATATGCA+TGG + Chr2:45309502-45309521 MsG0280009101.01.T01:intron 25.0%
!!! CTTTTATTTACTAGTCTCTA+AGG - Chr2:45309655-45309674 None:intergenic 25.0%
!!! GACTTGAAGTAGTTTTATAA+TGG - Chr2:45308560-45308579 None:intergenic 25.0%
!!! TAATAGACTGAAACTTGTTT+TGG - Chr2:45307197-45307216 None:intergenic 25.0%
!!! TGTTTTTTTGATGGTATAAC+AGG + Chr2:45308640-45308659 MsG0280009101.01.T01:intron 25.0%
!!! TTATGTCTTGTTTGTTCAAT+TGG + Chr2:45307681-45307700 MsG0280009101.01.T01:intron 25.0%
!!! TTCTATTCGATATTTTGAGA+TGG - Chr2:45311475-45311494 None:intergenic 25.0%
!!! TTGAAGTAGTTTTATAATGG+TGG - Chr2:45308557-45308576 None:intergenic 25.0%
!!! TTTATTGGAAGTATTCAAAC+AGG + Chr2:45308145-45308164 MsG0280009101.01.T01:intron 25.0%
!!! TTTTAAATTTTGGTTGCAGT+CGG + Chr2:45307898-45307917 MsG0280009101.01.T01:intron 25.0%
AACAACATACTGTAAGATCT+TGG - Chr2:45309632-45309651 None:intergenic 30.0%
AACAGAGAATGACATCAATA+TGG - Chr2:45310613-45310632 None:intergenic 30.0%
AACCAAACCAAACTTATAAG+GGG - Chr2:45311249-45311268 None:intergenic 30.0%
AACTATTTGGATTGAGACTT+TGG - Chr2:45308925-45308944 None:intergenic 30.0%
AACTCAACGTGTTCATTAAT+TGG - Chr2:45311166-45311185 None:intergenic 30.0%
ACTGCAAAAATATAATGTGG+AGG - Chr2:45310871-45310890 None:intergenic 30.0%
AGAACATATAGAGACAACTT+AGG + Chr2:45306932-45306951 MsG0280009101.01.T01:intron 30.0%
AGAGGAAAAAAAGAGAGAAA+CGG - Chr2:45307029-45307048 None:intergenic 30.0%
AGATGATGTATTAAGTGTCA+AGG + Chr2:45312906-45312925 MsG0280009101.01.T01:intron 30.0%
AGCAGACAAATATCAAATTG+AGG - Chr2:45310402-45310421 None:intergenic 30.0%
AGTCTTTAAATGAGCATATC+CGG + Chr2:45310915-45310934 MsG0280009101.01.T01:intron 30.0%
ATCAAAATCCATATCTCATG+TGG - Chr2:45310363-45310382 None:intergenic 30.0%
ATGTATTAAGTGTCAAGGAA+TGG + Chr2:45312911-45312930 MsG0280009101.01.T01:intron 30.0%
ATGTGGGACAATTATAATTG+GGG - Chr2:45310346-45310365 None:intergenic 30.0%
ATGTTAAATCTCATCTATCG+TGG - Chr2:45311346-45311365 None:intergenic 30.0%
CAGACCATCTTTAATGATAT+TGG - Chr2:45309387-45309406 None:intergenic 30.0%
CATGTGGGACAATTATAATT+GGG - Chr2:45310347-45310366 None:intergenic 30.0%
CGATAAAAATAACCCTAAGA+CGG - Chr2:45306881-45306900 None:intergenic 30.0%
GACATCAATATGGAAAAACT+TGG - Chr2:45310603-45310622 None:intergenic 30.0%
GATAAAAATAACCCTAAGAC+GGG - Chr2:45306880-45306899 None:intergenic 30.0%
GTGTTCATTAATTGGATTCT+TGG - Chr2:45311158-45311177 None:intergenic 30.0%
GTTACTATGAGATATAGACA+CGG - Chr2:45307561-45307580 None:intergenic 30.0%
TAACTCAGCTCCTATAAAAT+CGG + Chr2:45310239-45310258 MsG0280009101.01.T01:intron 30.0%
TAGAAGATCGTCATTAGTTA+GGG + Chr2:45312745-45312764 MsG0280009101.01.T01:intron 30.0%
TCAAAATCCATATCTCATGT+GGG - Chr2:45310362-45310381 None:intergenic 30.0%
TCATGTGGGACAATTATAAT+TGG - Chr2:45310348-45310367 None:intergenic 30.0%
TGTCTCTATATGTTCTTCTA+AGG - Chr2:45306928-45306947 None:intergenic 30.0%
TGTTAAATCTCATCTATCGT+GGG - Chr2:45311345-45311364 None:intergenic 30.0%
TTCAACTAAGCTCAGATTAA+TGG - Chr2:45306608-45306627 None:intergenic 30.0%
TTCGTAGTAGTAGAAACAAA+TGG + Chr2:45308680-45308699 MsG0280009101.01.T01:CDS 30.0%
TTGGACTTTAATCGAACATT+TGG - Chr2:45312569-45312588 None:intergenic 30.0%
TTTACAGGAACATCTGTTAT+GGG + Chr2:45307801-45307820 MsG0280009101.01.T01:CDS 30.0%
TTTGAATTTACCCATTTCAG+AGG + Chr2:45313050-45313069 MsG0280009101.01.T01:intron 30.0%
! AAACGTGACAAGTATGTTTT+AGG + Chr2:45312641-45312660 MsG0280009101.01.T01:intron 30.0%
! AAATTTGGTTGGATTTGGTT+GGG - Chr2:45311815-45311834 None:intergenic 30.0%
! AAGCTAACTGTTTCTTGATT+AGG - Chr2:45309272-45309291 None:intergenic 30.0%
! ACTGTTTCTTGATTAGGATT+TGG - Chr2:45309266-45309285 None:intergenic 30.0%
! AGTAAAGAAAGGAAGTTTTG+TGG + Chr2:45309173-45309192 MsG0280009101.01.T01:intron 30.0%
! ATGGATTTGAAGTTCCATTA+TGG + Chr2:45310104-45310123 MsG0280009101.01.T01:intron 30.0%
! CAATTATCTTACCTCTGAAA+TGG + Chr2:45312789-45312808 MsG0280009101.01.T01:intron 30.0%
! CATTAACAATGAAGTACTCA+TGG + Chr2:45310515-45310534 MsG0280009101.01.T01:intron 30.0%
! CGCACTTATAACACATTTTT+AGG - Chr2:45311216-45311235 None:intergenic 30.0%
! GAATCAGTTTACACTTTTGA+TGG - Chr2:45310957-45310976 None:intergenic 30.0%
! GATTTTCTTAGAATTTGGGT+TGG + Chr2:45310213-45310232 MsG0280009101.01.T01:intron 30.0%
! GTCAGATTTGATTTAGATGA+TGG - Chr2:45312962-45312981 None:intergenic 30.0%
! TAAATTTGGTTGGATTTGGT+TGG - Chr2:45311816-45311835 None:intergenic 30.0%
! TAACAACTCACAGCAAATTT+TGG - Chr2:45308233-45308252 None:intergenic 30.0%
! TCAAAGGCTTAATTTTGTGA+AGG + Chr2:45311131-45311150 MsG0280009101.01.T01:intron 30.0%
! TTGTCTAGAATTGTTAGGTT+AGG - Chr2:45310041-45310060 None:intergenic 30.0%
!! ATTATCTTACCTCTGAAATG+GGG + Chr2:45312791-45312810 MsG0280009101.01.T01:intron 30.0%
!! GGCAATTCAAACTTGTTAAT+CGG + Chr2:45313134-45313153 MsG0280009101.01.T01:intron 30.0%
!! GTTCATGTTTTCCTTTGAAA+AGG + Chr2:45312860-45312879 MsG0280009101.01.T01:intron 30.0%
!! TTTGTTTCTACTACTACGAA+TGG - Chr2:45308680-45308699 None:intergenic 30.0%
!!! CAGCAATTTTCTAAAGTGTT+TGG - Chr2:45311587-45311606 None:intergenic 30.0%
!!! TACAAAACTTGCCATTTTCT+GGG - Chr2:45307833-45307852 None:intergenic 30.0%
!!! TTTAAATTTTGGTTGCAGTC+GGG + Chr2:45307899-45307918 MsG0280009101.01.T01:intron 30.0%
AAAACGGACAGCAAATTATG+AGG + Chr2:45308327-45308346 MsG0280009101.01.T01:intron 35.0%
AAAGTTTAGTGGAAAACCCA+TGG + Chr2:45309325-45309344 MsG0280009101.01.T01:CDS 35.0%
AAATAAGGTGCATGGTCATT+AGG + Chr2:45310732-45310751 MsG0280009101.01.T01:intron 35.0%
AAATTTGCAAGCTCGATCAA+AGG + Chr2:45311115-45311134 MsG0280009101.01.T01:intron 35.0%
AACAATTGTCTTACACTGGA+TGG + Chr2:45313111-45313130 MsG0280009101.01.T01:intron 35.0%
AACCTTACAAAATCGACTAC+TGG - Chr2:45311397-45311416 None:intergenic 35.0%
AACTAATGACGATCTTCTAG+CGG - Chr2:45312744-45312763 None:intergenic 35.0%
AAGTTCCAACTATTCAGTAC+TGG + Chr2:45307863-45307882 MsG0280009101.01.T01:intron 35.0%
AATAACTACAAGATGGACCA+TGG + Chr2:45307737-45307756 MsG0280009101.01.T01:CDS 35.0%
AATAGTTGGAACTTACCACA+TGG - Chr2:45307857-45307876 None:intergenic 35.0%
AATTTGTCGCTCTCTATTTC+AGG + Chr2:45308783-45308802 MsG0280009101.01.T01:intron 35.0%
ACAATTGTCTTACACTGGAT+GGG + Chr2:45313112-45313131 MsG0280009101.01.T01:intron 35.0%
ACTAAGCATGATGATTTGAG+TGG + Chr2:45306763-45306782 MsG0280009101.01.T01:CDS 35.0%
AGGTAAGAAGTTGTTGTAGT+TGG + Chr2:45313070-45313089 MsG0280009101.01.T01:intron 35.0%
ATGTAACGTAAGAGATCTCA+AGG + Chr2:45312490-45312509 MsG0280009101.01.T01:intron 35.0%
ATGTGCTTGGAAATTAAGCT+TGG + Chr2:45311561-45311580 MsG0280009101.01.T01:intron 35.0%
ATTCAAACTTGCCAAACAAC+AGG - Chr2:45313037-45313056 None:intergenic 35.0%
CAAAAGGTAAACTCTACCTT+TGG + Chr2:45308456-45308475 MsG0280009101.01.T01:intron 35.0%
CAACTGAATGAATTCAACCA+AGG + Chr2:45312515-45312534 MsG0280009101.01.T01:intron 35.0%
CAATACCCTTATCATCAAAG+AGG - Chr2:45306699-45306718 None:intergenic 35.0%
CAATTAACGATAGAGGCTTT+AGG + Chr2:45311532-45311551 MsG0280009101.01.T01:intron 35.0%
CACAAACATGGAAAACAAAC+AGG - Chr2:45309048-45309067 None:intergenic 35.0%
CACTATGTTCATGAATGAGA+AGG - Chr2:45308357-45308376 None:intergenic 35.0%
CAGCATGAATTTCATAACCA+TGG - Chr2:45307757-45307776 None:intergenic 35.0%
CATCAGACAAAGAAACAAAG+AGG + Chr2:45308949-45308968 MsG0280009101.01.T01:CDS 35.0%
CATGCATGTAAGAAGTAGTT+TGG - Chr2:45310077-45310096 None:intergenic 35.0%
CCTAACAATTCTAGACAAGA+TGG + Chr2:45310043-45310062 MsG0280009101.01.T01:intron 35.0%
CGATGACTAGTGTTATCAAT+TGG + Chr2:45308015-45308034 MsG0280009101.01.T01:intron 35.0%
CGCTCCAATATCATTAAAGA+TGG + Chr2:45309380-45309399 MsG0280009101.01.T01:CDS 35.0%
CTAAAGCCTCTATCGTTAAT+TGG - Chr2:45311534-45311553 None:intergenic 35.0%
CTAGAAGATCGTCATTAGTT+AGG + Chr2:45312744-45312763 MsG0280009101.01.T01:intron 35.0%
CTTGTCTTAAAGAGTCACTT+GGG - Chr2:45311428-45311447 None:intergenic 35.0%
CTTTAATGTAATGCTGCCTA+TGG + Chr2:45310191-45310210 MsG0280009101.01.T01:intron 35.0%
CTTTACAGGAACATCTGTTA+TGG + Chr2:45307800-45307819 MsG0280009101.01.T01:CDS 35.0%
CTTTAGGCTATATATGTGCT+TGG + Chr2:45311548-45311567 MsG0280009101.01.T01:intron 35.0%
GACTTACCAATTAACGATAG+AGG + Chr2:45311525-45311544 MsG0280009101.01.T01:intron 35.0%
GATTTACAAGACACCAGATT+TGG + Chr2:45308282-45308301 MsG0280009101.01.T01:intron 35.0%
GCATGAATGCTCATATCAAA+AGG + Chr2:45308440-45308459 MsG0280009101.01.T01:intron 35.0%
GCTGCAGTAATAAAGTTTAG+TGG + Chr2:45309314-45309333 MsG0280009101.01.T01:CDS 35.0%
GTAGGCATGTAAAAAGACAT+TGG + Chr2:45310708-45310727 MsG0280009101.01.T01:intron 35.0%
TAATTGTCCCACATGAGATA+TGG + Chr2:45310352-45310371 MsG0280009101.01.T01:intron 35.0%
TAGGACACACTTAATGCTAT+TGG + Chr2:45307237-45307256 MsG0280009101.01.T01:intron 35.0%
TATTTGGGTGATTCCAAATC+TGG - Chr2:45308298-45308317 None:intergenic 35.0%
TCAAATGGCAACAATCATGA+AGG - Chr2:45309489-45309508 None:intergenic 35.0%
TCTTGTCTTAAAGAGTCACT+TGG - Chr2:45311429-45311448 None:intergenic 35.0%
TGGTAGAACAAACGCTTATT+TGG + Chr2:45307614-45307633 MsG0280009101.01.T01:intron 35.0%
TGTAAGACAATTGTTGCAGT+TGG - Chr2:45313106-45313125 None:intergenic 35.0%
TGTCTGATGGAAGAACTATT+TGG - Chr2:45308938-45308957 None:intergenic 35.0%
TGTGGTTTATGACATTGAAG+AGG + Chr2:45310450-45310469 MsG0280009101.01.T01:intron 35.0%
TTACTCTTGATGTATGCCTT+TGG + Chr2:45308180-45308199 MsG0280009101.01.T01:intron 35.0%
TTAGGTTAGGTTCAACAAGT+AGG - Chr2:45310028-45310047 None:intergenic 35.0%
TTCGTATTCCTCAATTTCCT+AGG + Chr2:45308076-45308095 MsG0280009101.01.T01:intron 35.0%
TTGATCGAGCTTGCAAATTT+AGG - Chr2:45311115-45311134 None:intergenic 35.0%
! AACCCTTTATTTGTCTGAAG+CGG - Chr2:45309099-45309118 None:intergenic 35.0%
! ACAACTTCTTACCTCTGAAA+TGG - Chr2:45313064-45313083 None:intergenic 35.0%
! AGAAACAGTTAGCTTGAGAA+AGG + Chr2:45309277-45309296 MsG0280009101.01.T01:CDS 35.0%
! ATCATGTCTGAAGTTAGCAA+TGG + Chr2:45311026-45311045 MsG0280009101.01.T01:intron 35.0%
! ATTGATAACACTAGTCATCG+AGG - Chr2:45308015-45308034 None:intergenic 35.0%
! CCATCTTGTCTAGAATTGTT+AGG - Chr2:45310046-45310065 None:intergenic 35.0%
! CTATGTGTCACTATCGTATT+CGG + Chr2:45307532-45307551 MsG0280009101.01.T01:intron 35.0%
! CTCAATTTCCTAGGACTTTT+GGG + Chr2:45308085-45308104 MsG0280009101.01.T01:intron 35.0%
! CTCTTTGTTTCTTTGTCTGA+TGG - Chr2:45308951-45308970 None:intergenic 35.0%
! GATTTGACATTTTGCAGTTG+AGG + Chr2:45308260-45308279 MsG0280009101.01.T01:intron 35.0%
! GATTTTATAGGAGCTGAGTT+AGG - Chr2:45310240-45310259 None:intergenic 35.0%
! TAACACCAGTACTGAATAGT+TGG - Chr2:45307871-45307890 None:intergenic 35.0%
! TGTGCGTAGATTTGAAACAA+TGG + Chr2:45312400-45312419 MsG0280009101.01.T01:intron 35.0%
! TGTTTGGAGCCAAAAATAGT+AGG + Chr2:45310690-45310709 MsG0280009101.01.T01:intron 35.0%
! TTGATGGTCAATAAGCTTTG+TGG - Chr2:45310941-45310960 None:intergenic 35.0%
! TTGTGGTGCAGTTTTCATAA+AGG - Chr2:45308490-45308509 None:intergenic 35.0%
!! AAACCAGAATTGGTCTTTAC+AGG + Chr2:45307786-45307805 MsG0280009101.01.T01:CDS 35.0%
!! AAATAAAGGGTTAGTTGCCT+CGG + Chr2:45309107-45309126 MsG0280009101.01.T01:intron 35.0%
!! AGTTGTTAAGCTAGCTTTAG+AGG - Chr2:45307047-45307066 None:intergenic 35.0%
!! ATATGGAAAAACTTGGTGTG+TGG - Chr2:45310596-45310615 None:intergenic 35.0%
!! ATTCAAACTTGTTAATCGGC+AGG + Chr2:45313138-45313157 MsG0280009101.01.T01:intron 35.0%
!! CAACTTCTTACCTCTGAAAT+GGG - Chr2:45313063-45313082 None:intergenic 35.0%
!! TATGGAAAAACTTGGTGTGT+GGG - Chr2:45310595-45310614 None:intergenic 35.0%
!! TTCAGTACTGGTGTTATCTA+TGG + Chr2:45307875-45307894 MsG0280009101.01.T01:intron 35.0%
!! TTCCAGTAGTCGATTTTGTA+AGG + Chr2:45311392-45311411 MsG0280009101.01.T01:intron 35.0%
!!! CTACAAAACTTGCCATTTTC+TGG - Chr2:45307834-45307853 None:intergenic 35.0%
!!! TATTTTGAGATGGCTTAGTG+AGG - Chr2:45311465-45311484 None:intergenic 35.0%
AAACGGAAGATAGTGAATCC+TGG - Chr2:45306441-45306460 None:intergenic 40.0%
AAAGGAAGAGAGAAACAGAC+CGG - Chr2:45306856-45306875 None:intergenic 40.0%
AAATGGGTGGAGAATGAAAG+TGG - Chr2:45306470-45306489 None:intergenic 40.0%
AACCTCAAAGGTTGAAGGTT+CGG + Chr2:45312461-45312480 MsG0280009101.01.T01:CDS 40.0%
AAGCTAAGACGTGTATCACT+TGG - Chr2:45309021-45309040 None:intergenic 40.0%
AATAACCCTAAGACGGGTAA+AGG - Chr2:45306874-45306893 None:intergenic 40.0%
AATGAAAGTGGCCATGGAAA+CGG - Chr2:45306458-45306477 None:intergenic 40.0%
AATGCTTGAGTCCTGTTGTT+TGG + Chr2:45313023-45313042 MsG0280009101.01.T01:intron 40.0%
ACAAATGGAGACAAGCTATC+TGG + Chr2:45308695-45308714 MsG0280009101.01.T01:CDS 40.0%
ACATTGGCAAATAAGGTGCA+TGG + Chr2:45310724-45310743 MsG0280009101.01.T01:intron 40.0%
ACCCTTATCATCAAAGAGGT+GGG - Chr2:45306695-45306714 None:intergenic 40.0%
ACGATGGTATTCAAGTGTCA+AGG + Chr2:45313187-45313206 MsG0280009101.01.T01:CDS 40.0%
AGAAGTGATTCCCTGATAGA+TGG + Chr2:45309885-45309904 MsG0280009101.01.T01:intron 40.0%
AGAGTAGTTGTGGATGTTGA+AGG - Chr2:45306530-45306549 None:intergenic 40.0%
AGTGATACACGTCTTAGCTT+AGG + Chr2:45309021-45309040 MsG0280009101.01.T01:intron 40.0%
ATCTGACCCTACTGCAATTA+AGG - Chr2:45307975-45307994 None:intergenic 40.0%
ATGCGACCTTAATTGCAGTA+GGG + Chr2:45307966-45307985 MsG0280009101.01.T01:intron 40.0%
ATGGGTGTTAACCCAGAAAA+TGG + Chr2:45307819-45307838 MsG0280009101.01.T01:CDS 40.0%
ATTCAAGTGCCAACGAAATG+AGG - Chr2:45312938-45312957 None:intergenic 40.0%
CAAATGGAGACAAGCTATCT+GGG + Chr2:45308696-45308715 MsG0280009101.01.T01:CDS 40.0%
CAACCAAAGAGACACAAGAA+GGG + Chr2:45312541-45312560 MsG0280009101.01.T01:intron 40.0%
CAATTGTCTTACACTGGATG+GGG + Chr2:45313113-45313132 MsG0280009101.01.T01:intron 40.0%
CAGATACAAGGAGTGATGTT+TGG + Chr2:45310674-45310693 MsG0280009101.01.T01:intron 40.0%
CATCTCTCCCCTTATAAGTT+TGG + Chr2:45311239-45311258 MsG0280009101.01.T01:intron 40.0%
CCAAAAGTCCTAGGAAATTG+AGG - Chr2:45308087-45308106 None:intergenic 40.0%
CGTACAATACACCAATTGGT+GGG - Chr2:45309702-45309721 None:intergenic 40.0%
CTCCCCTTATAAGTTTGGTT+TGG + Chr2:45311244-45311263 MsG0280009101.01.T01:intron 40.0%
CTGCAACAATTGTCTTACAC+TGG + Chr2:45313107-45313126 MsG0280009101.01.T01:intron 40.0%
CTTCTCTAACCCATCTATCA+GGG - Chr2:45309898-45309917 None:intergenic 40.0%
CTTTAATGATGTTGCTGGGT+AGG + Chr2:45308727-45308746 MsG0280009101.01.T01:intron 40.0%
GAAATGGGGTGATTCAAACT+TGG + Chr2:45312805-45312824 MsG0280009101.01.T01:intron 40.0%
GAAGTGATTCCCTGATAGAT+GGG + Chr2:45309886-45309905 MsG0280009101.01.T01:intron 40.0%
GATCGTCATTAGTTAGGGTA+AGG + Chr2:45312750-45312769 MsG0280009101.01.T01:intron 40.0%
GGAACTTCAAATCCATCAAG+AGG - Chr2:45310100-45310119 None:intergenic 40.0%
GGTATTCAAGTGTCAAGGAA+TGG + Chr2:45313192-45313211 MsG0280009101.01.T01:CDS 40.0%
GGTGATTCAAACTTGGCAAA+CGG + Chr2:45312812-45312831 MsG0280009101.01.T01:intron 40.0%
GTGAATACAGGAGTAGTCAT+CGG - Chr2:45308879-45308898 None:intergenic 40.0%
GTTCCTGTAAAGACCAATTC+TGG - Chr2:45307792-45307811 None:intergenic 40.0%
GTTGTTGTCAAGTGACTGAA+AGG - Chr2:45309788-45309807 None:intergenic 40.0%
TACCCTTATCATCAAAGAGG+TGG - Chr2:45306696-45306715 None:intergenic 40.0%
TAGTAAATAAAAGGGCAGCC+CGG + Chr2:45309662-45309681 MsG0280009101.01.T01:intron 40.0%
TAGTGAATCCCAAAAGTCCT+AGG - Chr2:45308096-45308115 None:intergenic 40.0%
TCAACCAAAGAGACACAAGA+AGG + Chr2:45312540-45312559 MsG0280009101.01.T01:intron 40.0%
TCAGTTGCATTGGGTTAAAC+CGG + Chr2:45306834-45306853 MsG0280009101.01.T01:CDS 40.0%
TCCCGCTTCAGACAAATAAA+GGG + Chr2:45309094-45309113 MsG0280009101.01.T01:intron 40.0%
TCGAACATGGTCCTTCATAA+TGG + Chr2:45309451-45309470 MsG0280009101.01.T01:intron 40.0%
TCTATTAACGCAAAGCGTGT+CGG + Chr2:45307210-45307229 MsG0280009101.01.T01:intron 40.0%
TCTTCTCTAACCCATCTATC+AGG - Chr2:45309899-45309918 None:intergenic 40.0%
TGCTGTTGACACATTAGAGA+AGG + Chr2:45311602-45311621 MsG0280009101.01.T01:intron 40.0%
TGGTGCAAGTTGTAGGAAAT+GGG - Chr2:45306486-45306505 None:intergenic 40.0%
TTAACTACCGAGGAAATCCT+CGG - Chr2:45311706-45311725 None:intergenic 40.0%
TTCACTATCTTCCGTTTCCA+TGG + Chr2:45306444-45306463 MsG0280009101.01.T01:exon 40.0%
TTCCCGCTTCAGACAAATAA+AGG + Chr2:45309093-45309112 MsG0280009101.01.T01:intron 40.0%
TTCGACCTGGATCATTGTAA+CGG - Chr2:45309436-45309455 None:intergenic 40.0%
TTCGCAGCATACCATTATGA+AGG - Chr2:45309465-45309484 None:intergenic 40.0%
TTGACACATTAGAGAAGGCT+GGG + Chr2:45311607-45311626 MsG0280009101.01.T01:intron 40.0%
TTGGCTAGATGACTTCTCAT+TGG + Chr2:45310487-45310506 MsG0280009101.01.T01:intron 40.0%
TTTGAATCACCCCATTTCAG+AGG - Chr2:45312803-45312822 None:intergenic 40.0%
TTTGGACAAGTCAACATCGA+TGG - Chr2:45308907-45308926 None:intergenic 40.0%
! ACCCTTTATTTGTCTGAAGC+GGG - Chr2:45309098-45309117 None:intergenic 40.0%
! AGAGGAATGAAGTGCTCATT+TGG + Chr2:45310468-45310487 MsG0280009101.01.T01:intron 40.0%
! CAGCCGGATTTTAAATTCCT+CGG - Chr2:45311674-45311693 None:intergenic 40.0%
! CATAAAGGCACAATCACCAA+AGG - Chr2:45308475-45308494 None:intergenic 40.0%
! CCTCAATTTCCTAGGACTTT+TGG + Chr2:45308084-45308103 MsG0280009101.01.T01:intron 40.0%
! CGTAGATTTGAAACAATGGC+CGG + Chr2:45312404-45312423 MsG0280009101.01.T01:intron 40.0%
! CTGATTGAGTTGCTATAGAC+AGG + Chr2:45307705-45307724 MsG0280009101.01.T01:intron 40.0%
! CTGCCGAGGAATTTAAAATC+CGG + Chr2:45311668-45311687 MsG0280009101.01.T01:intron 40.0%
! GTTAGCTTGAGAAAGGTAGA+AGG + Chr2:45309284-45309303 MsG0280009101.01.T01:CDS 40.0%
! TATAAGTTGACGACTCTGCT+TGG - Chr2:45307085-45307104 None:intergenic 40.0%
! TGAAATTCATGCTGCTTCCA+TGG + Chr2:45307763-45307782 MsG0280009101.01.T01:CDS 40.0%
!! AAGACCAATTCTGGTTTCCA+TGG - Chr2:45307783-45307802 None:intergenic 40.0%
!! AATAAAGGGTTAGTTGCCTC+GGG + Chr2:45309108-45309127 MsG0280009101.01.T01:intron 40.0%
!! GACTTATGATCTCTGAAGCA+CGG - Chr2:45307266-45307285 None:intergenic 40.0%
!! GCTCTACAAGCCGATTTTAT+AGG - Chr2:45310252-45310271 None:intergenic 40.0%
!!! TTTTTTTTACGGTGTCTCCG+TGG - Chr2:45306571-45306590 None:intergenic 40.0%
AAGCGGGAAATCAGAGAGAT+AGG - Chr2:45309082-45309101 None:intergenic 45.0%
ACAACTTTACCGTTACGCCA+AGG + Chr2:45309803-45309822 MsG0280009101.01.T01:intron 45.0%
ACAATGATCCAGGTCGAACA+TGG + Chr2:45309438-45309457 MsG0280009101.01.T01:intron 45.0%
ACCCAATGCAACTGAAACTG+AGG - Chr2:45306829-45306848 None:intergenic 45.0%
AGCCTCAGTTTCAGTTGCAT+TGG + Chr2:45306824-45306843 MsG0280009101.01.T01:CDS 45.0%
AGCTTGAGAAAGGTAGAAGG+AGG + Chr2:45309287-45309306 MsG0280009101.01.T01:CDS 45.0%
AGGAATGGACCTCATTTCGT+TGG + Chr2:45312926-45312945 MsG0280009101.01.T01:intron 45.0%
AGGAGAACCTCAAAGGTTGA+AGG + Chr2:45312456-45312475 MsG0280009101.01.T01:CDS 45.0%
AGTAAATAAAAGGGCAGCCC+GGG + Chr2:45309663-45309682 MsG0280009101.01.T01:intron 45.0%
AGTTCCAGTGGATCGATATG+CGG + Chr2:45312673-45312692 MsG0280009101.01.T01:intron 45.0%
CAAAGGAAAACATGAACGCG+AGG - Chr2:45312857-45312876 None:intergenic 45.0%
CAAGTAGGACTGATCACAAG+TGG - Chr2:45310013-45310032 None:intergenic 45.0%
CATATCGATCCACTGGAACT+TGG - Chr2:45312673-45312692 None:intergenic 45.0%
CCCAGCAACATCATTAAAGC+CGG - Chr2:45308726-45308745 None:intergenic 45.0%
CCCTTATCATCAAAGAGGTG+GGG - Chr2:45306694-45306713 None:intergenic 45.0%
CGACGTTCATGCACATTCAA+CGG + Chr2:45312433-45312452 MsG0280009101.01.T01:CDS 45.0%
CTACAACTTGCACCACTTTC+CGG + Chr2:45306491-45306510 MsG0280009101.01.T01:CDS 45.0%
CTATCGTGGGACTTTCATTG+TGG - Chr2:45311332-45311351 None:intergenic 45.0%
CTATTCATTCTTGCATCCCG+AGG - Chr2:45309127-45309146 None:intergenic 45.0%
CTCATAGGCTACTCACAATC+AGG + Chr2:45311297-45311316 MsG0280009101.01.T01:intron 45.0%
CTCTTCCTTTACCCGTCTTA+GGG + Chr2:45306866-45306885 MsG0280009101.01.T01:intron 45.0%
CTTACATGCATGCCTCTTGA+TGG + Chr2:45310085-45310104 MsG0280009101.01.T01:intron 45.0%
GAAGAAGTGGAGAGTAGTTG+TGG - Chr2:45306540-45306559 None:intergenic 45.0%
GACAAGCTATCTGGGAATAC+CGG + Chr2:45308704-45308723 MsG0280009101.01.T01:CDS 45.0%
GAGCACATCCAAGATCTCAT+AGG + Chr2:45311282-45311301 MsG0280009101.01.T01:intron 45.0%
GATGCGACCTTAATTGCAGT+AGG + Chr2:45307965-45307984 MsG0280009101.01.T01:intron 45.0%
GCCTCAGTTTCAGTTGCATT+GGG + Chr2:45306825-45306844 MsG0280009101.01.T01:CDS 45.0%
GCGTACAATACACCAATTGG+TGG - Chr2:45309703-45309722 None:intergenic 45.0%
GCTGCGTACAATACACCAAT+TGG - Chr2:45309706-45309725 None:intergenic 45.0%
GCTTCCATGGAAACCAGAAT+TGG + Chr2:45307776-45307795 MsG0280009101.01.T01:CDS 45.0%
GGAGGATATTGTTCGCGAAA+AGG + Chr2:45309346-45309365 MsG0280009101.01.T01:CDS 45.0%
GTAGTTGTGGATGTTGAAGG+CGG - Chr2:45306527-45306546 None:intergenic 45.0%
GTCAAGTGACTGAAAGGTCA+CGG - Chr2:45309782-45309801 None:intergenic 45.0%
GTCACTCCCCTTAGAAAACA+AGG - Chr2:45309572-45309591 None:intergenic 45.0%
GTGAGTAGCCTATGAGATCT+TGG - Chr2:45311293-45311312 None:intergenic 45.0%
GTGGTGCAAGTTGTAGGAAA+TGG - Chr2:45306487-45306506 None:intergenic 45.0%
GTTGACACATTAGAGAAGGC+TGG + Chr2:45311606-45311625 MsG0280009101.01.T01:intron 45.0%
GTTTAGTGGAAAACCCATGG+AGG + Chr2:45309328-45309347 MsG0280009101.01.T01:CDS 45.0%
TAAAGTCCAAAGCTCGACGA+GGG + Chr2:45312579-45312598 MsG0280009101.01.T01:intron 45.0%
TAATCTCTAATGGGGAGCCT+TGG - Chr2:45309823-45309842 None:intergenic 45.0%
TCAAGTGACTGAAAGGTCAC+GGG - Chr2:45309781-45309800 None:intergenic 45.0%
TCGACCTGGATCATTGTAAC+GGG - Chr2:45309435-45309454 None:intergenic 45.0%
TCGAGATGACCATCGAATGT+TGG + Chr2:45313225-45313244 MsG0280009101.01.T01:CDS 45.0%
TCGATGGCTTGAGTGAATAC+AGG - Chr2:45308891-45308910 None:intergenic 45.0%
TCGCGAACAATATCCTCCAT+GGG - Chr2:45309344-45309363 None:intergenic 45.0%
TCTCTTCCTTTACCCGTCTT+AGG + Chr2:45306865-45306884 MsG0280009101.01.T01:intron 45.0%
TGCAAGTTGTAGGAAATGGG+TGG - Chr2:45306483-45306502 None:intergenic 45.0%
TTAAAGTCCAAAGCTCGACG+AGG + Chr2:45312578-45312597 MsG0280009101.01.T01:intron 45.0%
TTCAAACTTGGCAAACGGCT+AGG + Chr2:45312817-45312836 MsG0280009101.01.T01:intron 45.0%
TTCGCGAACAATATCCTCCA+TGG - Chr2:45309345-45309364 None:intergenic 45.0%
! ACCGGCTTTAATGATGTTGC+TGG + Chr2:45308722-45308741 MsG0280009101.01.T01:CDS 45.0%
! CAAAGGAAAGTATGAACGCG+AGG + Chr2:45312997-45313016 MsG0280009101.01.T01:intron 45.0%
! CCCCACCTCTTTGATGATAA+GGG + Chr2:45306691-45306710 MsG0280009101.01.T01:CDS 45.0%
! CCGGCTTTAATGATGTTGCT+GGG + Chr2:45308723-45308742 MsG0280009101.01.T01:CDS 45.0%
! GATTTGAAACAATGGCCGGA+TGG + Chr2:45312408-45312427 MsG0280009101.01.T01:intron 45.0%
! GTAAATACGTTTTGCCCCCT+CGG + Chr2:45311638-45311657 MsG0280009101.01.T01:intron 45.0%
! TCCCCACCTCTTTGATGATA+AGG + Chr2:45306690-45306709 MsG0280009101.01.T01:CDS 45.0%
! TGGTCAATAAGCTTTGTGGC+CGG - Chr2:45310937-45310956 None:intergenic 45.0%
! TGTCTCTTTGGTTGACTCCT+TGG - Chr2:45312535-45312554 None:intergenic 45.0%
!! AAAATCGGCTTGTAGAGCGA+GGG + Chr2:45310254-45310273 MsG0280009101.01.T01:intron 45.0%
!! TAAAATCGGCTTGTAGAGCG+AGG + Chr2:45310253-45310272 MsG0280009101.01.T01:intron 45.0%
!! TGGCAAGTTTTGTAGCCATG+TGG + Chr2:45307839-45307858 MsG0280009101.01.T01:CDS 45.0%
!!! CCAGAGCCTTGTTTTCTAAG+GGG + Chr2:45309563-45309582 MsG0280009101.01.T01:intron 45.0%
!!! GCCAGAGCCTTGTTTTCTAA+GGG + Chr2:45309562-45309581 MsG0280009101.01.T01:intron 45.0%
!!! GTTATAATTTAAAAATTTTA+GGG + Chr2:45312146-45312165 MsG0280009101.01.T01:intron 5.0%
!!! TGTTATAATTTAAAAATTTT+AGG + Chr2:45312145-45312164 MsG0280009101.01.T01:intron 5.0%
!!! TTTATTGTATAATTTTTTTT+TGG + Chr2:45307594-45307613 MsG0280009101.01.T01:intron 5.0%
AAAGTCCAAAGCTCGACGAG+GGG + Chr2:45312580-45312599 MsG0280009101.01.T01:intron 50.0%
AGCAGGACTCCAACATTCGA+TGG - Chr2:45313237-45313256 None:intergenic 50.0%
ATGAAGGACCATGTTCGACC+TGG - Chr2:45309449-45309468 None:intergenic 50.0%
ATGAGAGAGCTTCTGCCACT+CGG - Chr2:45311732-45311751 None:intergenic 50.0%
CACCGAACCTTCAACCTTTG+AGG - Chr2:45312466-45312485 None:intergenic 50.0%
CATCGGTATCTTCTCTGCTG+TGG - Chr2:45308862-45308881 None:intergenic 50.0%
CATTACCACGTGTCGTACAC+TGG - Chr2:45307436-45307455 None:intergenic 50.0%
CCCCTTAGAAAACAAGGCTC+TGG - Chr2:45309566-45309585 None:intergenic 50.0%
CGGAAAGTGGTGCAAGTTGT+AGG - Chr2:45306493-45306512 None:intergenic 50.0%
CGTTCATGCACATTCAACGG+AGG + Chr2:45312436-45312455 MsG0280009101.01.T01:CDS 50.0%
CTGATCACAAGTGGTCTGTC+TGG - Chr2:45310004-45310023 None:intergenic 50.0%
CTTGCCCGTTACAATGATCC+AGG + Chr2:45309428-45309447 MsG0280009101.01.T01:intron 50.0%
GAGCGTATCATTCACTTGGG+TGG + Chr2:45312602-45312621 MsG0280009101.01.T01:intron 50.0%
GATGGTCATCTCGAACGATG+AGG - Chr2:45313219-45313238 None:intergenic 50.0%
GCACCCTTCTTGTGTCTCTT+TGG - Chr2:45312547-45312566 None:intergenic 50.0%
GCAGGTCTCCAACATTCGAT+GGG + Chr2:45313156-45313175 MsG0280009101.01.T01:intron 50.0%
GGGAAATCAGAGAGATAGGC+AGG - Chr2:45309078-45309097 None:intergenic 50.0%
GTGGAGAATGAAAGTGGCCA+TGG - Chr2:45306464-45306483 None:intergenic 50.0%
GTTACTGCCGAGGATTTCCT+CGG + Chr2:45311696-45311715 MsG0280009101.01.T01:intron 50.0%
GTTCCAGTGGATCGATATGC+GGG + Chr2:45312674-45312693 MsG0280009101.01.T01:intron 50.0%
TCAACGGAGGAGAACCTCAA+AGG + Chr2:45312449-45312468 MsG0280009101.01.T01:CDS 50.0%
TCGAGATGCCCATCGAATGT+TGG - Chr2:45313167-45313186 None:intergenic 50.0%
TCGTGGGACTTTCATTGTGG+CGG - Chr2:45311329-45311348 None:intergenic 50.0%
TGCATGAACGTCGATCCATC+CGG - Chr2:45312426-45312445 None:intergenic 50.0%
! AGGGGAGCGTATCATTCACT+TGG + Chr2:45312598-45312617 MsG0280009101.01.T01:intron 50.0%
! GGGGAGCGTATCATTCACTT+GGG + Chr2:45312599-45312618 MsG0280009101.01.T01:intron 50.0%
! TAACGGGCAAGCAAACAACC+AGG - Chr2:45309419-45309438 None:intergenic 50.0%
! TTTTTACGGTGTCTCCGTGG+TGG - Chr2:45306568-45306587 None:intergenic 50.0%
!!! GGCCAGAGCCTTGTTTTCTA+AGG + Chr2:45309561-45309580 MsG0280009101.01.T01:intron 50.0%
AATGGGGAGCCTTGGCGTAA+CGG - Chr2:45309815-45309834 None:intergenic 55.0%
CAATTGGTGGGACCCTTTCC+AGG - Chr2:45309690-45309709 None:intergenic 55.0%
CACTCGGCAGTTAACTACCG+AGG - Chr2:45311716-45311735 None:intergenic 55.0%
CACTTCTTCTCCAGCCACCA+CGG + Chr2:45306551-45306570 MsG0280009101.01.T01:CDS 55.0%
CAGAGAGATAGGCAGGTGCA+CGG - Chr2:45309071-45309090 None:intergenic 55.0%
CATGTCCAGTGTACGACACG+TGG + Chr2:45307428-45307447 MsG0280009101.01.T01:intron 55.0%
CGTGGGACTTTCATTGTGGC+GGG - Chr2:45311328-45311347 None:intergenic 55.0%
CTCGGTAGTTAACTGCCGAG+TGG + Chr2:45311714-45311733 MsG0280009101.01.T01:intron 55.0%
CTGGAAAGGGTCCCACCAAT+TGG + Chr2:45309688-45309707 MsG0280009101.01.T01:intron 55.0%
GCAAGCAAACAACCAGGCTG+AGG - Chr2:45309413-45309432 None:intergenic 55.0%
GGCAGGTCTCCAACATTCGA+TGG + Chr2:45313155-45313174 MsG0280009101.01.T01:intron 55.0%
GTTGTGGATGTTGAAGGCGG+AGG - Chr2:45306524-45306543 None:intergenic 55.0%
TCACCCGCATATCGATCCAC+TGG - Chr2:45312680-45312699 None:intergenic 55.0%
TCGATGGGCATCTCGAACGA+TGG + Chr2:45313171-45313190 MsG0280009101.01.T01:CDS 55.0%
TGGATGTTGAAGGCGGAGGT+TGG - Chr2:45306520-45306539 None:intergenic 55.0%
! AGGAGCACACCAAGTTCCAG+TGG + Chr2:45312661-45312680 MsG0280009101.01.T01:intron 55.0%
! GATGGTCTGAAACCTCAGCC+TGG + Chr2:45309398-45309417 MsG0280009101.01.T01:CDS 55.0%
CCTCGGCAGTTAACTGCCGA+GGG - Chr2:45311674-45311655 None:intergenic 60.0%
CGCAAAGCGTGTCGGACACT+AGG + Chr2:45307218-45307237 MsG0280009101.01.T01:intron 60.0%
CGTGGTGGCTGGAGAAGAAG+TGG - Chr2:45306553-45306572 None:intergenic 60.0%
CTCGGCAGTTAACTGCCGAG+GGG - Chr2:45311675-45311656 None:intergenic 60.0%
GCAGGTGCACGGCACAAACA+TGG - Chr2:45309060-45309079 None:intergenic 60.0%
TCCTCGGCAGTAACTGCAGC+CGG - Chr2:45311690-45311709 None:intergenic 60.0%
TCCTCGGCAGTTAACTGCCG+AGG - Chr2:45311658-45311677 None:intergenic 60.0%
TCGGCAGTTAACTGCCGAGG+GGG - Chr2:45311676-45311657 None:intergenic 60.0%
ACGCTCCCCTCGTCGAGCTT+TGG - Chr2:45312588-45312607 None:intergenic 65.0%
CCCTCGGCAGTTAACTGCCG+AGG + Chr2:45311654-45311673 MsG0280009101.01.T01:intron 65.0%
GTGGGACCCTTTCCAGGACC+CGG - Chr2:45309684-45309703 None:intergenic 65.0%
TAAAAGGGCAGCCCGGGTCC+TGG + Chr2:45309669-45309688 MsG0280009101.01.T01:intron 65.0%
TACGGTGTCTCCGTGGTGGC+TGG - Chr2:45306564-45306583 None:intergenic 65.0%
TCCGGCTGCAGTTACTGCCG+AGG + Chr2:45311686-45311705 MsG0280009101.01.T01:intron 65.0%
TGGGACCCTTTCCAGGACCC+GGG - Chr2:45309683-45309702 None:intergenic 65.0%
! GGAGGTTGGTCGCCGGAAAG+TGG - Chr2:45306506-45306525 None:intergenic 65.0%
! TGAAGGCGGAGGTTGGTCGC+CGG - Chr2:45306513-45306532 None:intergenic 65.0%
GGCAGCCCGGGTCCTGGAAA+GGG + Chr2:45309675-45309694 MsG0280009101.01.T01:intron 70.0%
GGGCAGCCCGGGTCCTGGAA+AGG + Chr2:45309674-45309693 MsG0280009101.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 45306434 45313262 45306434 ID=MsG0280009101.01;Name=MsG0280009101.01
Chr2 mRNA 45306434 45313262 45306434 ID=MsG0280009101.01.T01;Parent=MsG0280009101.01;Name=MsG0280009101.01.T01;_AED=0.50;_eAED=0.58;_QI=29|0.5|0.57|1|1|1|7|0|365
Chr2 exon 45313160 45313262 45313160 ID=MsG0280009101.01.T01:exon:5868;Parent=MsG0280009101.01.T01
Chr2 exon 45312409 45312496 45312409 ID=MsG0280009101.01.T01:exon:5867;Parent=MsG0280009101.01.T01
Chr2 exon 45309259 45309419 45309259 ID=MsG0280009101.01.T01:exon:5866;Parent=MsG0280009101.01.T01
Chr2 exon 45308839 45308970 45308839 ID=MsG0280009101.01.T01:exon:5865;Parent=MsG0280009101.01.T01
Chr2 exon 45308662 45308744 45308662 ID=MsG0280009101.01.T01:exon:5864;Parent=MsG0280009101.01.T01
Chr2 exon 45307723 45307860 45307723 ID=MsG0280009101.01.T01:exon:5863;Parent=MsG0280009101.01.T01
Chr2 exon 45306434 45306855 45306434 ID=MsG0280009101.01.T01:exon:5862;Parent=MsG0280009101.01.T01
Chr2 five_prime_UTR 45306434 45306462 45306434 ID=MsG0280009101.01.T01:five_prime_utr;Parent=MsG0280009101.01.T01
Chr2 CDS 45306463 45306855 45306463 ID=MsG0280009101.01.T01:cds;Parent=MsG0280009101.01.T01
Chr2 CDS 45307723 45307860 45307723 ID=MsG0280009101.01.T01:cds;Parent=MsG0280009101.01.T01
Chr2 CDS 45308662 45308744 45308662 ID=MsG0280009101.01.T01:cds;Parent=MsG0280009101.01.T01
Chr2 CDS 45308839 45308970 45308839 ID=MsG0280009101.01.T01:cds;Parent=MsG0280009101.01.T01
Chr2 CDS 45309259 45309419 45309259 ID=MsG0280009101.01.T01:cds;Parent=MsG0280009101.01.T01
Chr2 CDS 45312409 45312496 45312409 ID=MsG0280009101.01.T01:cds;Parent=MsG0280009101.01.T01
Chr2 CDS 45313160 45313262 45313160 ID=MsG0280009101.01.T01:cds;Parent=MsG0280009101.01.T01
Gene Sequence

>MsG0280009101.01.T01

ATGGCCACTTTCATTCTCCACCCATTTCCTACAACTTGCACCACTTTCCGGCGACCAACCTCCGCCTTCAACATCCACAACTACTCTCCACTTCTTCTCCAGCCACCACGGAGACACCGTAAAAAAAATCACATTAAATGGGCCATTAATCTGAGCTTAGTTGAACAGAGTACACAAAAATCGAGTTTTGATTTGCAGCAACTTGTTGCGTTTCTTTACGACGATCTTCCCCACCTCTTTGATGATAAGGGTATTGATAAAAATGCTTATGATGAACGTGTCTTCTTTCGTGACCCAATTACTAAGCATGATGATTTGAGTGGTTATCTTTTCAACATTGCTCTTCTTAAGACAATCTTTAAGCCTCAGTTTCAGTTGCATTGGGTTAAACCGACAGGACCTTATGAAATAACTACAAGATGGACCATGGTTATGAAATTCATGCTGCTTCCATGGAAACCAGAATTGGTCTTTACAGGAACATCTGTTATGGGTGTTAACCCAGAAAATGGCAAGTTTTGTAGCCATGTGGTTAGACAGTATGATCCATTCGTAGTAGTAGAAACAAATGGAGACAAGCTATCTGGGAATACCGGCTTTAATGATGTTGCTGGGTATATATTTGGAAAGAATTCCACAGCAGAGAAGATACCGATGACTACTCCTGTATTCACTCAAGCCATCGATGTTGACTTGTCCAAAGTCTCAATCCAAATAGTTCTTCCATCAGACAAAGAAACAAAGAGTTTACCAAATCCTAATCAAGAAACAGTTAGCTTGAGAAAGGTAGAAGGAGGCATTGCTGCAGTAATAAAGTTTAGTGGAAAACCCATGGAGGATATTGTTCGCGAAAAGGAGAAAATTTTACGCTCCAATATCATTAAAGATGGTCTGAAACCTCAGCCTGATTTGAAACAATGGCCGGATGGATCGACGTTCATGCACATTCAACGGAGGAGAACCTCAAAGGTTGAAGGTTCGGTGCTTGATGTAACGTCTCCAACATTCGATGGGCATCTCGAACGATGGTATTCAAGTGTCAAGGAATGGACCTCATCGTTCGAGATGACCATCGAATGTTGGAGTCCTGCTGCTTAG

Protein sequence

>MsG0280009101.01.T01

MATFILHPFPTTCTTFRRPTSAFNIHNYSPLLLQPPRRHRKKNHIKWAINLSLVEQSTQKSSFDLQQLVAFLYDDLPHLFDDKGIDKNAYDERVFFRDPITKHDDLSGYLFNIALLKTIFKPQFQLHWVKPTGPYEITTRWTMVMKFMLLPWKPELVFTGTSVMGVNPENGKFCSHVVRQYDPFVVVETNGDKLSGNTGFNDVAGYIFGKNSTAEKIPMTTPVFTQAIDVDLSKVSIQIVLPSDKETKSLPNPNQETVSLRKVEGGIAAVIKFSGKPMEDIVREKEKILRSNIIKDGLKPQPDLKQWPDGSTFMHIQRRRTSKVEGSVLDVTSPTFDGHLERWYSSVKEWTSSFEMTIECWSPAA*