AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880041909.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041909.01.T01 MTR_8g005710 83.493 521 22 3 1 457 59 579 0.0 866
MsG0880041909.01.T01 MTR_7g034380 71.206 514 91 3 1 457 59 572 0.0 726
MsG0880041909.01.T01 MTR_8g027260 70.624 497 49 4 1 460 99 535 0.0 681
MsG0880041909.01.T01 MTR_1g048110 65.377 517 122 4 1 460 99 615 0.0 676
MsG0880041909.01.T01 MTR_8g006680 66.214 515 106 5 1 457 97 601 0.0 670
MsG0880041909.01.T01 MTR_8g005300 66.214 515 106 5 1 457 97 601 0.0 670
MsG0880041909.01.T01 MTR_8g005640 66.214 515 106 5 1 457 97 601 0.0 670
MsG0880041909.01.T01 MTR_3g010080 65.631 515 117 6 1 457 98 610 0.0 664
MsG0880041909.01.T01 MTR_6g055570 65.571 517 114 6 1 457 99 611 0.0 655
MsG0880041909.01.T01 MTR_1g007030 64.922 516 122 6 1 457 99 614 0.0 652
MsG0880041909.01.T01 MTR_1g006990 63.900 518 126 4 1 457 99 616 0.0 642
MsG0880041909.01.T01 MTR_6g055410 63.443 517 107 7 1 457 99 593 0.0 627
MsG0880041909.01.T01 MTR_2g044630 60.000 515 122 6 1 457 99 587 0.0 592
MsG0880041909.01.T01 MTR_3g452290 59.847 523 110 5 1 463 1 483 0.0 580
MsG0880041909.01.T01 MTR_3g451220 59.847 523 110 5 1 463 1 483 0.0 580
MsG0880041909.01.T01 MTR_2g042640 57.815 531 128 7 1 472 68 561 0.0 568
MsG0880041909.01.T01 MTR_2g042650 59.660 471 132 6 8 457 91 524 0.0 531
MsG0880041909.01.T01 MTR_7g104200 42.642 530 226 11 4 461 100 623 9.00e-123 375
MsG0880041909.01.T01 MTR_6g075370 40.421 522 223 12 1 470 97 582 2.10e-117 360
MsG0880041909.01.T01 MTR_8g079900 39.474 532 246 11 1 461 1 527 6.46e-115 352
MsG0880041909.01.T01 MTR_8g079900 39.474 532 246 11 1 461 99 625 2.60e-114 353
MsG0880041909.01.T01 MTR_7g075890 40.189 530 244 9 1 461 255 780 9.53e-114 356
MsG0880041909.01.T01 MTR_4g103450 38.571 560 237 13 4 460 75 630 1.60e-112 349
MsG0880041909.01.T01 MTR_4g103480 38.849 556 241 13 4 460 118 673 1.15e-111 348
MsG0880041909.01.T01 MTR_8g042670 38.698 553 245 15 3 466 101 648 3.63e-110 343
MsG0880041909.01.T01 MTR_8g033150 39.623 530 248 11 1 461 82 608 1.26e-109 341
MsG0880041909.01.T01 MTR_8g033150 39.623 530 248 11 1 461 109 635 1.78e-109 341
MsG0880041909.01.T01 MTR_8g042710 38.313 569 240 13 3 466 92 654 2.25e-107 336
MsG0880041909.01.T01 MTR_2g070250 56.923 325 62 5 60 326 101 405 3.88e-107 324
MsG0880041909.01.T01 MTR_3g061110 37.248 545 256 12 4 463 101 644 7.95e-107 334
MsG0880041909.01.T01 MTR_4g103400 37.434 569 243 15 4 463 101 665 1.10e-106 335
MsG0880041909.01.T01 MTR_4g103495 38.772 570 236 16 4 466 102 665 3.07e-106 333
MsG0880041909.01.T01 MTR_3g082200 36.445 557 253 11 4 460 104 659 6.61e-106 332
MsG0880041909.01.T01 MTR_4g103430 36.786 560 246 12 4 460 101 655 1.12e-105 332
MsG0880041909.01.T01 MTR_4g103490 36.632 576 244 15 4 464 105 674 2.47e-104 328
MsG0880041909.01.T01 MTR_4g134320 35.663 558 257 11 4 460 102 658 1.11e-103 327
MsG0880041909.01.T01 MTR_7g098070 36.331 556 255 12 4 460 99 654 2.32e-103 325
MsG0880041909.01.T01 MTR_4g053630 38.750 560 240 15 4 465 70 624 4.44e-103 324
MsG0880041909.01.T01 MTR_7g081500 36.788 579 233 19 4 460 104 671 6.75e-102 322
MsG0880041909.01.T01 MTR_3g082200 36.965 514 231 10 39 460 24 536 1.65e-101 317
MsG0880041909.01.T01 MTR_1g102350 37.097 558 246 14 3 460 109 661 2.61e-101 320
MsG0880041909.01.T01 MTR_4g053630 38.616 549 234 15 15 465 4 547 1.21e-100 315
MsG0880041909.01.T01 MTR_5g096750 37.544 570 238 17 4 469 105 660 1.34e-100 318
MsG0880041909.01.T01 MTR_7g081420 35.875 577 242 18 4 460 105 673 1.93e-100 318
MsG0880041909.01.T01 MTR_8g072440 35.398 565 243 13 1 462 57 602 2.62e-100 316
MsG0880041909.01.T01 MTR_5g016120 38.043 552 248 12 4 463 98 647 5.35e-100 317
MsG0880041909.01.T01 MTR_8g072440 35.398 565 243 13 1 462 99 644 5.70e-100 316
MsG0880041909.01.T01 MTR_3g104930 36.331 556 251 14 3 460 92 642 2.40e-99 315
MsG0880041909.01.T01 MTR_3g082200 37.228 505 224 10 48 460 18 521 3.12e-99 311
MsG0880041909.01.T01 MTR_3g114420 35.802 567 263 14 3 473 98 659 4.01e-99 314
MsG0880041909.01.T01 MTR_4g103495 39.458 517 214 14 48 467 3 517 4.70e-99 310
MsG0880041909.01.T01 MTR_8g042670 37.917 509 227 14 42 466 21 524 6.30e-99 310
MsG0880041909.01.T01 MTR_4g095360 36.331 556 253 14 3 463 92 641 6.46e-99 313
MsG0880041909.01.T01 MTR_7g081580 35.862 580 239 19 4 461 105 673 6.06e-98 312
MsG0880041909.01.T01 MTR_7g081380 35.185 594 248 16 4 462 105 696 6.79e-98 312
MsG0880041909.01.T01 MTR_5g025010 35.893 560 249 13 1 462 62 609 7.57e-98 310
MsG0880041909.01.T01 MTR_5g055920 37.361 538 229 13 20 460 27 553 9.73e-98 308
MsG0880041909.01.T01 MTR_5g025010 35.893 560 249 13 1 462 94 641 1.61e-97 310
MsG0880041909.01.T01 MTR_7g481600 36.364 572 247 19 4 461 105 673 2.14e-97 311
MsG0880041909.01.T01 MTR_4g053635 37.143 560 246 14 4 465 16 567 3.16e-97 307
MsG0880041909.01.T01 MTR_2g042130 36.022 558 261 14 4 466 106 662 8.29e-97 308
MsG0880041909.01.T01 MTR_8g022870 37.057 564 250 11 4 463 94 656 1.13e-96 308
MsG0880041909.01.T01 MTR_1g018510 36.298 551 260 12 3 463 53 602 2.96e-96 306
MsG0880041909.01.T01 MTR_8g083220 36.637 565 246 15 4 464 110 666 3.44e-96 307
MsG0880041909.01.T01 MTR_0047s0120 35.548 557 257 12 3 463 93 643 7.89e-96 306
MsG0880041909.01.T01 MTR_4g125180 35.791 556 262 12 4 466 87 640 3.24e-95 304
MsG0880041909.01.T01 MTR_4g073540 34.046 561 270 10 4 465 92 651 7.89e-95 303
MsG0880041909.01.T01 MTR_7g075900 35.766 548 262 11 15 472 120 667 7.77e-94 301
MsG0880041909.01.T01 MTR_7g081750 34.907 593 244 17 2 460 102 686 1.24e-93 301
MsG0880041909.01.T01 MTR_5g085690 33.786 589 265 16 4 470 102 687 1.38e-93 300
MsG0880041909.01.T01 MTR_7g098630 35.649 547 264 10 4 463 95 640 1.62e-93 302
MsG0880041909.01.T01 MTR_2g018125 35.000 560 245 14 1 442 95 653 2.65e-92 297
MsG0880041909.01.T01 MTR_8g042710 37.132 509 217 11 3 413 92 595 2.11e-90 289
MsG0880041909.01.T01 MTR_2g018135 34.938 561 245 15 1 442 93 652 2.38e-90 292
MsG0880041909.01.T01 MTR_3g102810 35.018 554 263 11 3 463 86 635 3.23e-90 291
MsG0880041909.01.T01 MTR_3g114410 36.831 486 218 12 3 402 98 580 1.77e-88 281
MsG0880041909.01.T01 MTR_4g102400 36.969 541 255 16 3 463 108 642 9.24e-88 284
MsG0880041909.01.T01 MTR_8g024380 35.660 530 260 9 3 452 106 634 4.44e-86 280
MsG0880041909.01.T01 MTR_1g078110 33.886 543 272 11 3 464 105 641 3.62e-85 278
MsG0880041909.01.T01 MTR_5g011190 35.955 534 242 16 15 462 121 640 8.07e-85 276
MsG0880041909.01.T01 MTR_1g079120 34.622 543 253 14 2 452 102 634 1.69e-84 276
MsG0880041909.01.T01 MTR_5g011270 35.514 535 261 13 4 463 114 639 2.73e-84 275
MsG0880041909.01.T01 MTR_5g011340 35.874 538 259 14 4 462 107 637 2.85e-84 275
MsG0880041909.01.T01 MTR_7g079310 33.631 559 280 14 1 471 104 659 4.98e-84 275
MsG0880041909.01.T01 MTR_5g011370 35.955 534 242 16 15 462 141 660 6.30e-84 275
MsG0880041909.01.T01 MTR_5g011310 35.985 528 252 12 15 463 121 641 9.44e-84 274
MsG0880041909.01.T01 MTR_7g079300 34.353 556 275 18 3 471 109 661 1.48e-83 273
MsG0880041909.01.T01 MTR_5g011320 34.944 538 263 14 4 462 103 632 2.81e-82 270
MsG0880041909.01.T01 MTR_5g011280 35.714 532 246 13 15 463 125 643 6.09e-82 269
MsG0880041909.01.T01 MTR_2g049200 35.271 499 233 11 40 452 138 632 1.21e-81 268
MsG0880041909.01.T01 MTR_8g024390 35.192 520 250 10 15 448 111 629 1.82e-80 265
MsG0880041909.01.T01 MTR_5g011260 34.644 534 267 13 4 463 114 639 2.05e-79 262
MsG0880041909.01.T01 MTR_8g021130 32.855 557 276 17 4 463 104 659 1.08e-77 258
MsG0880041909.01.T01 MTR_3g464790 33.871 558 253 16 3 473 97 625 3.20e-77 256
MsG0880041909.01.T01 MTR_7g118080 34.714 507 218 15 40 452 144 631 2.53e-73 246
MsG0880041909.01.T01 MTR_8g024420 33.138 513 248 12 40 464 104 609 3.37e-73 245
MsG0880041909.01.T01 MTR_8g024370 32.597 543 268 16 15 464 107 644 2.41e-71 241
MsG0880041909.01.T01 MTR_4g071560 34.238 479 215 12 3 403 64 520 4.55e-61 209
MsG0880041909.01.T01 MTR_5g081100 36.272 397 153 9 1 331 64 426 1.07e-59 202
MsG0880041909.01.T01 MTR_3g114140 32.750 400 179 9 94 473 27 356 5.77e-51 179
MsG0880041909.01.T01 MTR_2g070260 79.310 87 18 0 371 457 1 87 2.10e-47 163
MsG0880041909.01.T01 MTR_4g127480 29.816 597 269 23 3 458 117 704 9.82e-47 173
MsG0880041909.01.T01 MTR_2g037850 30.885 599 258 24 3 457 117 703 3.10e-46 172
MsG0880041909.01.T01 MTR_5g081280 41.315 213 90 7 18 197 88 298 3.53e-44 157
MsG0880041909.01.T01 MTR_4g126230 40.437 183 108 1 288 470 32 213 1.39e-43 154
MsG0880041909.01.T01 MTR_4g132620 26.552 580 289 17 3 449 119 694 6.89e-42 159
MsG0880041909.01.T01 MTR_7g079295 37.209 258 107 6 1 204 106 362 2.75e-40 152
MsG0880041909.01.T01 MTR_3g114160 36.704 267 94 7 3 225 35 270 2.88e-38 143
MsG0880041909.01.T01 MTR_8g092940 43.750 144 75 4 3 142 55 196 2.56e-26 107
MsG0880041909.01.T01 MTR_5g044060 41.791 134 69 1 301 425 3 136 2.06e-22 94.7
MsG0880041909.01.T01 MTR_8g089230 37.037 162 79 3 307 448 566 724 5.13e-22 100
MsG0880041909.01.T01 MTR_8g089230 29.572 257 118 7 17 210 159 415 7.01e-14 74.7
MsG0880041909.01.T01 MTR_2g046740 39.873 158 72 5 311 448 562 716 4.46e-21 97.1
MsG0880041909.01.T01 MTR_2g046740 30.350 257 116 7 17 210 151 407 2.56e-17 85.5
MsG0880041909.01.T01 MTR_4g053665 56.164 73 30 1 330 402 1 71 1.21e-19 87.8
MsG0880041909.01.T01 MTR_3g065240 27.036 307 124 9 160 460 44 256 3.28e-19 87.8
MsG0880041909.01.T01 MTR_5g011300 48.315 89 39 1 371 452 1 89 3.37e-15 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041909.01.T01 AT5G59190 50.000 516 197 7 1 457 58 571 2.94e-162 475
MsG0880041909.01.T01 AT5G58840 48.911 505 201 7 1 460 98 590 1.81e-161 474
MsG0880041909.01.T01 AT5G58830 47.904 501 213 6 1 460 96 589 2.83e-160 471
MsG0880041909.01.T01 AT5G59100 47.429 525 209 8 1 460 97 619 7.55e-156 460
MsG0880041909.01.T01 AT3G46850 47.826 529 202 10 1 460 96 619 1.10e-154 457
MsG0880041909.01.T01 AT5G58820 48.016 504 209 7 1 460 92 586 4.73e-153 452
MsG0880041909.01.T01 AT3G46840 47.637 529 202 10 1 460 97 619 8.74e-152 450
MsG0880041909.01.T01 AT5G59090 46.947 524 206 10 1 460 95 610 6.78e-151 447
MsG0880041909.01.T01 AT5G59090 47.036 523 205 10 2 460 94 608 7.36e-151 447
MsG0880041909.01.T01 AT5G59120 46.415 530 218 10 1 469 94 618 1.15e-149 444
MsG0880041909.01.T01 AT5G59090 46.654 523 204 10 1 460 95 605 5.84e-149 442
MsG0880041909.01.T01 AT5G59130 46.731 520 209 10 1 460 59 570 4.47e-148 439
MsG0880041909.01.T01 AT5G59130 46.731 520 209 10 1 460 98 609 1.37e-147 439
MsG0880041909.01.T01 AT5G59130 46.525 518 209 10 3 460 96 605 7.15e-146 434
MsG0880041909.01.T01 AT5G58840 49.554 448 170 6 1 404 98 533 1.50e-143 422
MsG0880041909.01.T01 AT5G59130 45.769 520 204 11 1 460 98 599 9.56e-143 426
MsG0880041909.01.T01 AT4G15040 43.810 525 234 10 1 469 59 578 1.19e-126 384
MsG0880041909.01.T01 AT4G15040 43.810 525 234 10 1 469 59 578 1.19e-126 384
MsG0880041909.01.T01 AT5G03620 42.164 536 230 11 2 460 99 631 1.20e-117 363
MsG0880041909.01.T01 AT4G00230 40.858 536 245 10 1 467 100 632 1.88e-117 362
MsG0880041909.01.T01 AT2G04160 37.522 557 246 13 4 460 104 658 1.54e-108 339
MsG0880041909.01.T01 AT5G67360 37.770 556 246 15 3 463 93 643 1.41e-103 326
MsG0880041909.01.T01 AT5G58840 45.867 375 147 6 1 331 98 460 4.23e-101 311
MsG0880041909.01.T01 AT4G34980 36.528 553 256 11 4 462 87 638 1.75e-100 318
MsG0880041909.01.T01 AT5G51750 35.599 559 260 14 3 464 107 662 1.22e-98 313
MsG0880041909.01.T01 AT1G20160 35.752 565 266 12 3 473 56 617 1.57e-98 312
MsG0880041909.01.T01 AT5G03620 41.841 478 200 10 2 402 99 575 2.61e-98 307
MsG0880041909.01.T01 AT1G20160 35.752 565 266 12 3 473 95 656 4.44e-98 312
MsG0880041909.01.T01 AT4G00230 40.000 475 206 9 1 402 100 568 6.50e-98 306
MsG0880041909.01.T01 AT2G05920 35.883 549 262 10 7 466 93 640 6.94e-97 308
MsG0880041909.01.T01 AT4G26330 35.420 559 263 12 1 461 47 605 6.16e-95 303
MsG0880041909.01.T01 AT3G14240 35.829 561 258 10 4 463 91 650 7.52e-95 303
MsG0880041909.01.T01 AT5G59810 34.050 558 270 11 4 465 114 669 3.25e-94 302
MsG0880041909.01.T01 AT3G14067 35.701 549 263 12 4 462 98 646 1.58e-92 297
MsG0880041909.01.T01 AT4G10520 36.494 559 246 17 4 467 96 640 1.01e-91 295
MsG0880041909.01.T01 AT5G45650 36.598 582 238 18 4 459 94 670 1.20e-91 295
MsG0880041909.01.T01 AT5G45650 36.598 582 238 18 4 459 94 670 1.20e-91 295
MsG0880041909.01.T01 AT4G26330 34.555 573 263 13 1 461 47 619 4.26e-91 293
MsG0880041909.01.T01 AT1G20150 35.651 561 246 20 3 457 93 644 7.81e-91 293
MsG0880041909.01.T01 AT1G32960 35.009 577 248 16 4 467 99 661 3.67e-90 291
MsG0880041909.01.T01 AT4G21650 34.759 561 265 13 4 471 108 660 2.40e-89 289
MsG0880041909.01.T01 AT4G21640 36.101 554 234 14 4 471 108 627 2.55e-88 285
MsG0880041909.01.T01 AT4G21630 34.775 555 268 13 4 471 106 653 1.41e-87 284
MsG0880041909.01.T01 AT1G04110 34.058 552 272 11 4 463 100 651 5.17e-87 283
MsG0880041909.01.T01 AT4G10540 34.896 576 250 16 4 467 97 659 5.28e-86 280
MsG0880041909.01.T01 AT4G10550 34.561 570 259 13 4 467 45 606 1.89e-85 277
MsG0880041909.01.T01 AT4G10550 34.561 570 259 13 4 467 45 606 1.89e-85 277
MsG0880041909.01.T01 AT1G32940 35.938 576 244 15 4 467 45 607 2.01e-85 277
MsG0880041909.01.T01 AT1G32940 35.938 576 244 15 4 467 45 607 2.01e-85 277
MsG0880041909.01.T01 AT4G10510 34.507 568 261 14 4 467 30 590 4.88e-85 276
MsG0880041909.01.T01 AT1G32940 35.938 576 244 15 4 467 96 658 5.34e-85 277
MsG0880041909.01.T01 AT4G10510 34.507 568 261 14 4 467 45 605 5.81e-85 276
MsG0880041909.01.T01 AT4G10550 34.561 570 259 13 4 467 101 662 8.39e-85 277
MsG0880041909.01.T01 AT4G10550 34.561 570 259 13 4 467 117 678 9.18e-85 277
MsG0880041909.01.T01 AT4G10510 34.507 568 261 14 4 467 89 649 1.58e-84 276
MsG0880041909.01.T01 AT4G10510 34.507 568 261 14 4 467 101 661 1.75e-84 276
MsG0880041909.01.T01 AT1G01900 36.479 551 249 15 2 457 106 650 7.28e-84 275
MsG0880041909.01.T01 AT1G66220 34.364 550 256 14 4 464 104 637 1.35e-83 273
MsG0880041909.01.T01 AT1G32950 35.677 569 254 13 4 467 45 606 3.17e-83 271
MsG0880041909.01.T01 AT5G11940 33.513 558 269 14 4 471 104 649 4.45e-83 272
MsG0880041909.01.T01 AT1G32950 35.677 569 254 13 4 467 96 657 8.76e-83 271
MsG0880041909.01.T01 AT1G66210 35.165 546 253 15 4 461 107 639 2.29e-82 270
MsG0880041909.01.T01 AT4G10530 34.168 559 250 21 4 467 96 631 4.81e-79 261
MsG0880041909.01.T01 AT5G45640 32.812 576 259 17 1 451 56 628 1.25e-77 257
MsG0880041909.01.T01 AT2G39850 34.964 552 253 17 2 457 92 633 1.81e-77 257
MsG0880041909.01.T01 AT4G21326 33.212 551 278 15 4 471 45 588 2.19e-74 248
MsG0880041909.01.T01 AT1G32940 35.857 502 206 14 4 402 96 584 6.12e-70 234
MsG0880041909.01.T01 AT4G21323 34.438 543 252 18 4 456 147 675 7.06e-70 238
MsG0880041909.01.T01 AT5G67090 31.041 509 258 9 38 467 125 619 8.19e-69 233
MsG0880041909.01.T01 AT1G32970 32.423 549 262 15 13 467 85 618 7.01e-63 217
MsG0880041909.01.T01 AT1G20160 34.856 416 182 10 3 331 95 508 1.53e-61 210
MsG0880041909.01.T01 AT2G19170 29.492 590 261 22 3 449 113 690 3.95e-48 177
MsG0880041909.01.T01 AT2G19170 29.492 590 261 22 3 449 113 690 3.95e-48 177
MsG0880041909.01.T01 AT4G30020 29.362 596 272 21 3 457 113 700 5.99e-45 168
MsG0880041909.01.T01 AT4G30020 29.362 596 272 21 3 457 113 700 5.99e-45 168
MsG0880041909.01.T01 AT4G30020 29.362 596 272 21 3 457 113 700 5.99e-45 168
MsG0880041909.01.T01 AT4G30020 29.362 596 272 21 3 457 113 700 5.99e-45 168
MsG0880041909.01.T01 AT1G62340 27.919 591 278 19 2 449 124 709 1.11e-43 164
MsG0880041909.01.T01 AT4G20430 28.371 571 273 21 2 448 145 703 2.82e-43 163
MsG0880041909.01.T01 AT5G44530 30.824 279 128 8 12 225 140 418 1.90e-24 107
MsG0880041909.01.T01 AT5G44530 36.842 171 84 4 309 458 556 723 7.50e-22 99.8
MsG0880041909.01.T01 AT5G44530 30.824 279 128 8 12 225 140 418 2.08e-24 107
MsG0880041909.01.T01 AT5G44530 30.824 279 128 8 12 225 140 418 2.14e-24 107
MsG0880041909.01.T01 AT5G44530 36.478 159 76 4 309 447 556 709 2.58e-18 88.6
MsG0880041909.01.T01 AT1G30600 32.296 257 111 6 17 210 139 395 4.14e-24 106
MsG0880041909.01.T01 AT1G30600 38.650 163 67 4 311 448 548 702 5.95e-24 105
MsG0880041909.01.T01 AT1G32980 46.429 112 51 2 365 467 1 112 7.38e-24 99.0
MsG0880041909.01.T01 AT4G20430 29.137 278 123 9 17 225 160 432 1.83e-22 101
MsG0880041909.01.T01 AT4G20430 36.250 160 79 3 309 448 571 727 2.31e-20 95.1
MsG0880041909.01.T01 AT4G20430 29.137 278 123 9 17 225 160 432 1.83e-22 101
MsG0880041909.01.T01 AT4G20430 36.250 160 79 3 309 448 571 727 2.31e-20 95.1

Find 117 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCGGATGCTTTGTAATTA+TGG 0.156176 8:-1059466 MsG0880041909.01.T01:CDS
TTCATTGATAAGCTCATTCT+TGG 0.197618 8:-1060266 MsG0880041909.01.T01:CDS
ACTTGCAACAAGAAGATTAT+TGG 0.198881 8:-1060725 MsG0880041909.01.T01:CDS
TCCGTAAAACTTTCAGATTC+TGG 0.206944 8:+1061787 None:intergenic
ATTTCTAGAATCAACGGATT+TGG 0.234912 8:+1059832 None:intergenic
TCTATACACTCACACATTTC+AGG 0.237434 8:+1060134 None:intergenic
ACTCCTGGGGCACTTATATC+TGG 0.278609 8:+1059802 None:intergenic
ATCTTTCACAAAGGATCTAT+TGG 0.284929 8:+1059385 None:intergenic
ACCACGGCAAAACCGGTTAA+TGG 0.309667 8:-1059595 MsG0880041909.01.T01:CDS
TGAGCATTACGGACAGCTAT+TGG 0.319050 8:+1060182 None:intergenic
CAAGCTTGCCCAAGAGGATA+TGG 0.319241 8:-1060161 MsG0880041909.01.T01:CDS
CTAGAAACACTACTTGGTTT+AGG 0.327167 8:+1060338 None:intergenic
CCAGGGTCAACAGCTTGTTT+TGG 0.333424 8:+1059520 None:intergenic
TTTCTAGAATCAACGGATTT+GGG 0.333634 8:+1059833 None:intergenic
TAATGGTACTTATAATGATT+TGG 0.335166 8:-1059578 MsG0880041909.01.T01:CDS
TTGGCAGGTGAGTTTGCTTA+TGG 0.346605 8:-1059559 MsG0880041909.01.T01:CDS
ATGGCATGTCCTCACATTGC+TGG 0.348423 8:-1059685 MsG0880041909.01.T01:CDS
GGTGAGTTTGCTTATGGATC+TGG 0.349482 8:-1059553 MsG0880041909.01.T01:CDS
TTTAGAAATTCTACAGCAAT+TGG 0.359175 8:+1060437 None:intergenic
CTCTTCAAAATTTCAGCTAC+AGG 0.370808 8:+1059910 None:intergenic
GAGTCATAGATGGCGGAATA+TGG 0.371039 8:-1061810 MsG0880041909.01.T01:CDS
GATAAGCTCATTCTTGGAAA+TGG 0.374228 8:-1060260 MsG0880041909.01.T01:CDS
CATAGAATCTGGAACCTCTA+TGG 0.386362 8:-1059704 MsG0880041909.01.T01:CDS
GAGCATTACGGACAGCTATT+GGG 0.400603 8:+1060183 None:intergenic
GTCAAATACAGCATAGAATC+TGG 0.411448 8:-1059715 MsG0880041909.01.T01:CDS
CATCATGACCACGGCAAAAC+CGG 0.414627 8:-1059602 MsG0880041909.01.T01:CDS
ATTAATATTGTCCCCTCAAA+TGG 0.423702 8:-1060215 MsG0880041909.01.T01:CDS
TTGGGCAAGCTTGAGCATTA+CGG 0.425418 8:+1060171 None:intergenic
ATTGAGAGTGGTTTGGTGGT+TGG 0.427042 8:-1061832 MsG0880041909.01.T01:CDS
TTGGTGGTTGGAGTCATAGA+TGG 0.429912 8:-1061820 MsG0880041909.01.T01:CDS
TCATTATAAGTACCATTAAC+CGG 0.431252 8:+1059583 None:intergenic
TGAAATCATTTCATCCAGAT+TGG 0.432307 8:-1059648 MsG0880041909.01.T01:CDS
ATAGATGCTGGCGACCAATC+TGG 0.442455 8:+1059634 None:intergenic
TCAATTCATTGAGAGTGGTT+TGG 0.442596 8:-1061839 MsG0880041909.01.T01:CDS
TCAGGTGATCCATATCCTCT+TGG 0.444251 8:+1060152 None:intergenic
CTAAAAGATCCTATTGCCAT+TGG 0.445997 8:-1060419 MsG0880041909.01.T01:CDS
TGAAAAGAACCAATGGCAAT+AGG 0.449737 8:+1060410 None:intergenic
GATCAGAGTGCAAGAGACTA+TGG 0.451359 8:-1060683 MsG0880041909.01.T01:CDS
TAACAAATTAAATATATTAG+TGG 0.453658 8:-1059434 MsG0880041909.01.T01:CDS
ACAAGGTCGTGGGACTTCCT+TGG 0.455572 8:-1061886 MsG0880041909.01.T01:CDS
ATACTCACGGTGCAGGCCGC+AGG 0.472531 8:-1060371 MsG0880041909.01.T01:CDS
CAGGTGATCCATATCCTCTT+GGG 0.477258 8:+1060153 None:intergenic
TCTAAAGCCTACACTTAACT+TGG 0.477870 8:-1059983 MsG0880041909.01.T01:CDS
TGCCCCAGGAGTGGATATCT+TGG 0.479607 8:-1059791 MsG0880041909.01.T01:CDS
ATCAATGAATTGACGATCTA+CGG 0.485835 8:+1060280 None:intergenic
TTTGTATCCAAGTTAAGTGT+AGG 0.489055 8:+1059976 None:intergenic
GCTTATGCGAATGGTGCAAT+TGG 0.490912 8:-1060054 MsG0880041909.01.T01:CDS
TTCATAATTTCTAGAATCAA+CGG 0.494033 8:+1059826 None:intergenic
TTTGTCATTTATATCATCTG+AGG 0.494361 8:+1059744 None:intergenic
GGCAAGTGGAAGAGAGGTGG+AGG 0.499056 8:-1060633 MsG0880041909.01.T01:CDS
CTGTAGGAGCATTGTTGTCA+TGG 0.501407 8:+1059878 None:intergenic
GGTACTTATAATGATTTGGC+AGG 0.502252 8:-1059574 MsG0880041909.01.T01:CDS
GTGAGTTTGCTTATGGATCT+GGG 0.502458 8:-1059552 MsG0880041909.01.T01:CDS
GTGATGTCATAAACAAGTCC+AGG 0.505108 8:+1059502 None:intergenic
TTGTCATTTATATCATCTGA+GGG 0.508931 8:+1059745 None:intergenic
GCGGCCAAGATATCCACTCC+TGG 0.510488 8:+1059787 None:intergenic
AGGGGAGTTTGTGCAGGCGG+TGG 0.516084 8:-1060755 MsG0880041909.01.T01:CDS
CGGCCAAGATATCCACTCCT+GGG 0.516213 8:+1059788 None:intergenic
AAAGGAAATACTCACGGTGC+AGG 0.518394 8:-1060378 MsG0880041909.01.T01:CDS
ATTATTGGAGCAAGGTCGTA+CGG 0.518796 8:-1060710 MsG0880041909.01.T01:CDS
TCACTAAGGAAGATTATGTT+CGG 0.531253 8:-1059483 MsG0880041909.01.T01:CDS
GCAAGAGACTATGGTGGTCA+TGG 0.540854 8:-1060674 MsG0880041909.01.T01:CDS
GCTACGCTAGAAACACTACT+TGG 0.546160 8:+1060332 None:intergenic
AAGTGGAGGGGAGTTTGTGC+AGG 0.547033 8:-1060761 MsG0880041909.01.T01:CDS
TGATATAAATGACAAAAGAC+AGG 0.547527 8:-1059737 MsG0880041909.01.T01:CDS
AGAGATCAATTCATTGAGAG+TGG 0.552553 8:-1061844 MsG0880041909.01.T01:CDS
CCAAAACAAGCTGTTGACCC+TGG 0.557417 8:-1059520 MsG0880041909.01.T01:CDS
GTTGCTTCTTTCTCTTCTCG+TGG 0.558664 8:-1059856 MsG0880041909.01.T01:CDS
TACACTTAACTTGGATACAA+AGG 0.559084 8:-1059974 MsG0880041909.01.T01:CDS
TGGAGGGGAGTTTGTGCAGG+CGG 0.559611 8:-1060758 MsG0880041909.01.T01:CDS
AGATATAAGTGCCCCAGGAG+TGG 0.560065 8:-1059800 MsG0880041909.01.T01:CDS
CACTTGCCGTTGATGCCGTG+TGG 0.560429 8:+1060648 None:intergenic
CTTGCAAAAGGCACCGCAAG+AGG 0.569253 8:-1060593 MsG0880041909.01.T01:CDS
TCATCTGAGGGTGGCGCTAG+AGG 0.569258 8:+1059757 None:intergenic
ATTCATTGAGAGTGGTTTGG+TGG 0.570930 8:-1061836 MsG0880041909.01.T01:CDS
ACTTGCCGTTGATGCCGTGT+GGG 0.571594 8:+1060649 None:intergenic
AAACCAGATATAAGTGCCCC+AGG 0.571838 8:-1059805 MsG0880041909.01.T01:CDS
CACACGGCATCAACGGCAAG+TGG 0.576776 8:-1060647 MsG0880041909.01.T01:CDS
ACTTGTTTATGACATCACTA+AGG 0.578909 8:-1059497 MsG0880041909.01.T01:CDS
GGAGAAAACTCAAGTTGCCA+TGG 0.579032 8:-1059413 MsG0880041909.01.T01:CDS
GGAAAAGCTTATTGCATGAG+AGG 0.580488 8:-1061952 None:intergenic
AGGATCTATTGGAAGCTCCA+TGG 0.583400 8:+1059396 None:intergenic
AATGCTCAAGCTTGCCCAAG+AGG 0.586375 8:-1060167 MsG0880041909.01.T01:CDS
TATACAGCAATCTTTGAAGA+CGG 0.592108 8:+1060563 None:intergenic
ATGGCAGATTTGATAGATGC+TGG 0.592187 8:+1059622 None:intergenic
ATACAGCAATCTTTGAAGAC+GGG 0.597545 8:+1060564 None:intergenic
AACGGCAAGTGGAAGAGAGG+TGG 0.600282 8:-1060636 MsG0880041909.01.T01:CDS
GAAGAGAAAGAAGCAACTGT+AGG 0.603262 8:+1059862 None:intergenic
GAAGTATTGGCTTATGCGAA+TGG 0.604711 8:-1060063 MsG0880041909.01.T01:CDS
GCAAAAGGCACCGCAAGAGG+TGG 0.605589 8:-1060590 MsG0880041909.01.T01:CDS
CATGGCATGAAAAGAACCAA+TGG 0.606908 8:+1060403 None:intergenic
TGGAACCCACACGGCATCAA+CGG 0.607633 8:-1060654 MsG0880041909.01.T01:CDS
TCTTCAAAATTTCAGCTACA+GGG 0.607809 8:+1059911 None:intergenic
ATCAACGGCAAGTGGAAGAG+AGG 0.608127 8:-1060639 MsG0880041909.01.T01:CDS
AGACGGGACACCACCTCTTG+CGG 0.609976 8:+1060580 None:intergenic
AGCTTATTGCATGAGAGGTG+TGG 0.613222 8:-1061947 None:intergenic
TCATTTATATCATCTGAGGG+TGG 0.619632 8:+1059748 None:intergenic
ACAAGAAGATTATTGGAGCA+AGG 0.621653 8:-1060718 MsG0880041909.01.T01:CDS
GTGTTTCTAGCGTAGCACCT+TGG 0.625853 8:-1060325 MsG0880041909.01.T01:CDS
GTGCAGGCCGCAGGAAACAG+CGG 0.637642 8:-1060362 MsG0880041909.01.T01:CDS
TGATGTCATAAACAAGTCCA+GGG 0.639410 8:+1059503 None:intergenic
ATAGTTTATATCTTTCACAA+AGG 0.651025 8:+1059376 None:intergenic
GTGGTTGGAGTCATAGATGG+CGG 0.652798 8:-1061817 MsG0880041909.01.T01:CDS
GCAAGTGGAAGAGAGGTGGA+GGG 0.658577 8:-1060632 MsG0880041909.01.T01:CDS
TTTAGGACCGCTGTTTCCTG+CGG 0.660827 8:+1060355 None:intergenic
CATGGAAAAGGAAATACTCA+CGG 0.662894 8:-1060384 MsG0880041909.01.T01:CDS
TGGTGGTCATGGAACCCACA+CGG 0.664285 8:-1060663 MsG0880041909.01.T01:CDS
TGATTGATTGAGGAAATCCA+AGG 0.664374 8:+1061869 None:intergenic
GCAGCAACTCCAGCAATGTG+AGG 0.671476 8:+1059676 None:intergenic
GTAGGCTTTAGAGAGACCTG+AGG 0.673344 8:+1059994 None:intergenic
CAAATCTGCCATCATGACCA+CGG 0.673631 8:-1059611 MsG0880041909.01.T01:CDS
TGGCGCTAGAGGTGAATATG+CGG 0.679161 8:+1059768 None:intergenic
AATGTGAGGACATGCCATAG+AGG 0.691673 8:+1059690 None:intergenic
GCAGCAATACTAAATAACCA+AGG 0.693472 8:+1060308 None:intergenic
GGCCAAGATATCCACTCCTG+GGG 0.698020 8:+1059789 None:intergenic
ATTGGAGCAAGGTCGTACGG+CGG 0.701041 8:-1060707 MsG0880041909.01.T01:CDS
CAGAGTGCAAGAGACTATGG+TGG 0.718495 8:-1060680 MsG0880041909.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACAAATTAAATATATTAG+TGG - Chr8:1061893-1061912 MsG0880041909.01.T01:CDS 10.0%
!!! AAAAAGTGATTTTATTTTAT+AGG - Chr8:1060298-1060317 MsG0880041909.01.T01:CDS 10.0%
!!! AAAAGTGATTTTATTTTATA+GGG - Chr8:1060299-1060318 MsG0880041909.01.T01:CDS 10.0%
!! ACATCTCTATATTTATAAAT+GGG - Chr8:1060050-1060069 MsG0880041909.01.T01:CDS 15.0%
!! TAATTAACCCTAATTATTAT+AGG - Chr8:1060362-1060381 MsG0880041909.01.T01:CDS 15.0%
!! TCAATATCCTATAATAATTA+GGG + Chr8:1060372-1060391 None:intergenic 15.0%
!!! AACAAAATTTTGAATATTAC+AGG - Chr8:1060328-1060347 MsG0880041909.01.T01:CDS 15.0%
!!! ACAAAATTTTGAATATTACA+GGG - Chr8:1060329-1060348 MsG0880041909.01.T01:CDS 15.0%
!!! TAGTTTTTAGATGATAATTT+TGG + Chr8:1059422-1059441 None:intergenic 15.0%
!!! TTTTGTATCATATTAATATG+AGG + Chr8:1059672-1059691 None:intergenic 15.0%
!! ACAAAACTGTGAATATTTAT+AGG + Chr8:1060112-1060131 None:intergenic 20.0%
!! ACTGATGGAAAAAATTTATA+GGG - Chr8:1060239-1060258 MsG0880041909.01.T01:CDS 20.0%
!! ATTAAAACACTCAACATATA+TGG + Chr8:1060492-1060511 None:intergenic 20.0%
!! ATTAGGGTTAATTAAGTAAA+TGG + Chr8:1060356-1060375 None:intergenic 20.0%
!! ATTATCATCTAAAAACTACA+AGG - Chr8:1059424-1059443 MsG0880041909.01.T01:CDS 20.0%
!! CACATCTCTATATTTATAAA+TGG - Chr8:1060049-1060068 MsG0880041909.01.T01:CDS 20.0%
!! CATCTCTATATTTATAAATG+GGG - Chr8:1060051-1060070 MsG0880041909.01.T01:CDS 20.0%
!! GTCAATATCCTATAATAATT+AGG + Chr8:1060373-1060392 None:intergenic 20.0%
!! TAATGGTACTTATAATGATT+TGG - Chr8:1061749-1061768 MsG0880041909.01.T01:intron 20.0%
!! TACGATAAAAATGATAAGAT+TGG + Chr8:1060395-1060414 None:intergenic 20.0%
!! TACTGATGGAAAAAATTTAT+AGG - Chr8:1060238-1060257 MsG0880041909.01.T01:CDS 20.0%
!!! AATCTTATCATTTTTATCGT+AGG - Chr8:1060394-1060413 MsG0880041909.01.T01:CDS 20.0%
!!! AATGTGTGATTTTATTTTGT+AGG + Chr8:1060143-1060162 None:intergenic 20.0%
!!! ATGTGTGATTTTATTTTGTA+GGG + Chr8:1060142-1060161 None:intergenic 20.0%
!!! TATATGTTGAGTGTTTTAAT+TGG - Chr8:1060492-1060511 MsG0880041909.01.T01:intron 20.0%
!!! TTCATAATTTCTAGAATCAA+CGG + Chr8:1061504-1061523 None:intergenic 20.0%
!!! TTTTAGAATGTGTAACATTA+AGG + Chr8:1061305-1061324 None:intergenic 20.0%
! TATAGACAAAATATGGTGAA+CGG - Chr8:1061210-1061229 MsG0880041909.01.T01:intron 25.0%
! TCATTATAAGTACCATTAAC+CGG + Chr8:1061747-1061766 None:intergenic 25.0%
! TCTATATTTATAAATGGGGT+TGG - Chr8:1060055-1060074 MsG0880041909.01.T01:CDS 25.0%
! TGATATAAATGACAAAAGAC+AGG - Chr8:1061590-1061609 MsG0880041909.01.T01:intron 25.0%
! TTTAGAAATTCTACAGCAAT+TGG + Chr8:1060893-1060912 None:intergenic 25.0%
!! ATGCAGATGGAAAATTTTAT+AGG - Chr8:1060271-1060290 MsG0880041909.01.T01:CDS 25.0%
!! CATTTTCCTTAAGCATTTTA+AGG - Chr8:1060176-1060195 MsG0880041909.01.T01:CDS 25.0%
!! GGTATAATGTTAGTTTAGTA+TGG - Chr8:1059567-1059586 MsG0880041909.01.T01:CDS 25.0%
!! TGCAGATGGAAAATTTTATA+GGG - Chr8:1060272-1060291 MsG0880041909.01.T01:CDS 25.0%
!! TTGTCATTTATATCATCTGA+GGG + Chr8:1061585-1061604 None:intergenic 25.0%
!! TTTGTCATTTATATCATCTG+AGG + Chr8:1061586-1061605 None:intergenic 25.0%
!! TTTTGTCCTTAAAATGCTTA+AGG + Chr8:1060185-1060204 None:intergenic 25.0%
!!! TTTATTTTCTATGATCGATC+AGG - Chr8:1060524-1060543 MsG0880041909.01.T01:intron 25.0%
ACTTGCAACAAGAAGATTAT+TGG - Chr8:1060602-1060621 MsG0880041909.01.T01:CDS 30.0%
ACTTGTTTATGACATCACTA+AGG - Chr8:1061830-1061849 MsG0880041909.01.T01:CDS 30.0%
ATAAATATAGAGATGTGTGC+TGG + Chr8:1060046-1060065 None:intergenic 30.0%
ATCAATGAATTGACGATCTA+CGG + Chr8:1061050-1061069 None:intergenic 30.0%
ATTAATATTGTCCCCTCAAA+TGG - Chr8:1061112-1061131 MsG0880041909.01.T01:intron 30.0%
GACATTATCACAATCTCAAT+TGG - Chr8:1060864-1060883 MsG0880041909.01.T01:intron 30.0%
GATAGAGACTAAAATACTGA+TGG - Chr8:1060224-1060243 MsG0880041909.01.T01:CDS 30.0%
GTGAGTGTATAGACAAAATA+TGG - Chr8:1061203-1061222 MsG0880041909.01.T01:intron 30.0%
TCACTAAGGAAGATTATGTT+CGG - Chr8:1061844-1061863 MsG0880041909.01.T01:CDS 30.0%
TCTTCAAAATTTCAGCTACA+GGG + Chr8:1061419-1061438 None:intergenic 30.0%
TGAAATCATTTCATCCAGAT+TGG - Chr8:1061679-1061698 MsG0880041909.01.T01:intron 30.0%
TTAAGGACAAAAAACGTTGA+TGG - Chr8:1060193-1060212 MsG0880041909.01.T01:CDS 30.0%
TTCATTGATAAGCTCATTCT+TGG - Chr8:1061061-1061080 MsG0880041909.01.T01:intron 30.0%
TTTGTATCCAAGTTAAGTGT+AGG + Chr8:1061354-1061373 None:intergenic 30.0%
! AGCTTTTATGATCTTGCAAA+AGG - Chr8:1060722-1060741 MsG0880041909.01.T01:CDS 30.0%
! GGAAATGGAAAGACTTTTAT+TGG - Chr8:1061082-1061101 MsG0880041909.01.T01:intron 30.0%
! TACACTTAACTTGGATACAA+AGG - Chr8:1061353-1061372 MsG0880041909.01.T01:intron 30.0%
! TATACAGCAATCTTTGAAGA+CGG + Chr8:1060767-1060786 None:intergenic 30.0%
! TCTGAAAGTTTTACGGATAA+AGG - Chr8:1059546-1059565 MsG0880041909.01.T01:CDS 30.0%
!! ATTTCTAGAATCAACGGATT+TGG + Chr8:1061498-1061517 None:intergenic 30.0%
!! TGATCTCTTTTGATTGATTG+AGG + Chr8:1059471-1059490 None:intergenic 30.0%
!! TTTCTAGAATCAACGGATTT+GGG + Chr8:1061497-1061516 None:intergenic 30.0%
ACAAGAAGATTATTGGAGCA+AGG - Chr8:1060609-1060628 MsG0880041909.01.T01:CDS 35.0%
AGAGATCAATTCATTGAGAG+TGG - Chr8:1059483-1059502 MsG0880041909.01.T01:CDS 35.0%
AGGGACTAAAAAAATGCAGA+TGG - Chr8:1060258-1060277 MsG0880041909.01.T01:CDS 35.0%
ATCTAAAAACTACAAGGTCG+TGG - Chr8:1059430-1059449 MsG0880041909.01.T01:CDS 35.0%
ATGCTTAAGGAAAATGACAC+AGG + Chr8:1060172-1060191 None:intergenic 35.0%
CATGGAAAAGGAAATACTCA+CGG - Chr8:1060943-1060962 MsG0880041909.01.T01:intron 35.0%
CTAAAAGATCCTATTGCCAT+TGG - Chr8:1060908-1060927 MsG0880041909.01.T01:intron 35.0%
CTAGAAACACTACTTGGTTT+AGG + Chr8:1060992-1061011 None:intergenic 35.0%
CTCTTCAAAATTTCAGCTAC+AGG + Chr8:1061420-1061439 None:intergenic 35.0%
CTTCAAAGATTGCTGTATAC+AGG - Chr8:1060768-1060787 MsG0880041909.01.T01:CDS 35.0%
GATAAGCTCATTCTTGGAAA+TGG - Chr8:1061067-1061086 MsG0880041909.01.T01:intron 35.0%
GCAGCAATACTAAATAACCA+AGG + Chr8:1061022-1061041 None:intergenic 35.0%
GTCAAATACAGCATAGAATC+TGG - Chr8:1061612-1061631 MsG0880041909.01.T01:intron 35.0%
GTTCGGATGCTTTGTAATTA+TGG - Chr8:1061861-1061880 MsG0880041909.01.T01:CDS 35.0%
TCAATTCATTGAGAGTGGTT+TGG - Chr8:1059488-1059507 MsG0880041909.01.T01:CDS 35.0%
TCATTTATATCATCTGAGGG+TGG + Chr8:1061582-1061601 None:intergenic 35.0%
TCCGTAAAACTTTCAGATTC+TGG + Chr8:1059543-1059562 None:intergenic 35.0%
TCTAAAAACTACAAGGTCGT+GGG - Chr8:1059431-1059450 MsG0880041909.01.T01:CDS 35.0%
TCTATACACTCACACATTTC+AGG + Chr8:1061196-1061215 None:intergenic 35.0%
TGAAAAGAACCAATGGCAAT+AGG + Chr8:1060920-1060939 None:intergenic 35.0%
TGATGTCATAAACAAGTCCA+GGG + Chr8:1061827-1061846 None:intergenic 35.0%
TGATTGATTGAGGAAATCCA+AGG + Chr8:1059461-1059480 None:intergenic 35.0%
TGCTTAAGGAAAATGACACA+GGG + Chr8:1060171-1060190 None:intergenic 35.0%
! ATACAGCAATCTTTGAAGAC+GGG + Chr8:1060766-1060785 None:intergenic 35.0%
! GCCAGAATCTGAAAGTTTTA+CGG - Chr8:1059539-1059558 MsG0880041909.01.T01:CDS 35.0%
! GGTACTTATAATGATTTGGC+AGG - Chr8:1061753-1061772 MsG0880041909.01.T01:intron 35.0%
! TCTAAAGCCTACACTTAACT+TGG - Chr8:1061344-1061363 MsG0880041909.01.T01:intron 35.0%
! TTCTAAAAATGATGCTCCTC+AGG - Chr8:1061317-1061336 MsG0880041909.01.T01:intron 35.0%
! TTCTTTTCATGCCATGGAAA+AGG - Chr8:1060931-1060950 MsG0880041909.01.T01:intron 35.0%
!! GGGGTTGGTCATAATTATTA+GGG - Chr8:1060070-1060089 MsG0880041909.01.T01:CDS 35.0%
!! TGGGGTTGGTCATAATTATT+AGG - Chr8:1060069-1060088 MsG0880041909.01.T01:CDS 35.0%
AATGTCAACTCCATCAGCAA+TGG + Chr8:1060850-1060869 None:intergenic 40.0%
AGATGGTAACTGCAATGGAA+AGG - Chr8:1060800-1060819 MsG0880041909.01.T01:intron 40.0%
ATGGCAGATTTGATAGATGC+TGG + Chr8:1061708-1061727 None:intergenic 40.0%
ATTATTGGAGCAAGGTCGTA+CGG - Chr8:1060617-1060636 MsG0880041909.01.T01:CDS 40.0%
CATGGCATGAAAAGAACCAA+TGG + Chr8:1060927-1060946 None:intergenic 40.0%
GAAGAGAAAGAAGCAACTGT+AGG + Chr8:1061468-1061487 None:intergenic 40.0%
GTGATGTCATAAACAAGTCC+AGG + Chr8:1061828-1061847 None:intergenic 40.0%
TATACAGGTATGCGACAAGA+TGG - Chr8:1060783-1060802 MsG0880041909.01.T01:CDS 40.0%
! ATTCATTGAGAGTGGTTTGG+TGG - Chr8:1059491-1059510 MsG0880041909.01.T01:CDS 40.0%
! CATAGAATCTGGAACCTCTA+TGG - Chr8:1061623-1061642 MsG0880041909.01.T01:intron 40.0%
! CGTGAGTATTTCCTTTTCCA+TGG + Chr8:1060945-1060964 None:intergenic 40.0%
! GTGAGTTTGCTTATGGATCT+GGG - Chr8:1061775-1061794 MsG0880041909.01.T01:intron 40.0%
!! GAAGTATTGGCTTATGCGAA+TGG - Chr8:1061264-1061283 MsG0880041909.01.T01:intron 40.0%
!! TTCAGCTACAGGGTATTTTG+TGG + Chr8:1061409-1061428 None:intergenic 40.0%
!! TTGTTTTGTGTGGAACACCA+GGG - Chr8:1061238-1061257 MsG0880041909.01.T01:intron 40.0%
!! TTTGATGATGCCATTGCTGA+TGG - Chr8:1060837-1060856 MsG0880041909.01.T01:intron 40.0%
!!! AACGGTAAGCTTGTTTTGTG+TGG - Chr8:1061228-1061247 MsG0880041909.01.T01:intron 40.0%
!!! CATTGGTTCTTTTCATGCCA+TGG - Chr8:1060925-1060944 MsG0880041909.01.T01:intron 40.0%
!!! GGAATTTTGTGCCATTTGAG+GGG + Chr8:1061126-1061145 None:intergenic 40.0%
!!! GGGAATTTTGTGCCATTTGA+GGG + Chr8:1061127-1061146 None:intergenic 40.0%
!!! TGGGAATTTTGTGCCATTTG+AGG + Chr8:1061128-1061147 None:intergenic 40.0%
AAACCAGATATAAGTGCCCC+AGG - Chr8:1061522-1061541 MsG0880041909.01.T01:intron 45.0%
AAAGGAAATACTCACGGTGC+AGG - Chr8:1060949-1060968 MsG0880041909.01.T01:intron 45.0%
AATGTGAGGACATGCCATAG+AGG + Chr8:1061640-1061659 None:intergenic 45.0%
AGGATCTATTGGAAGCTCCA+TGG + Chr8:1061934-1061953 None:intergenic 45.0%
AGGTGTGATAAGGAGGTCAA+TGG + Chr8:1059999-1060018 None:intergenic 45.0%
CAAATCTGCCATCATGACCA+CGG - Chr8:1061716-1061735 MsG0880041909.01.T01:intron 45.0%
CAGGTGATCCATATCCTCTT+GGG + Chr8:1061177-1061196 None:intergenic 45.0%
CGACAAGATGGTAACTGCAA+TGG - Chr8:1060795-1060814 MsG0880041909.01.T01:intron 45.0%
GAGCATTACGGACAGCTATT+GGG + Chr8:1061147-1061166 None:intergenic 45.0%
GATCAGAGTGCAAGAGACTA+TGG - Chr8:1060644-1060663 MsG0880041909.01.T01:CDS 45.0%
GCTACGCTAGAAACACTACT+TGG + Chr8:1060998-1061017 None:intergenic 45.0%
GCTTATGCGAATGGTGCAAT+TGG - Chr8:1061273-1061292 MsG0880041909.01.T01:intron 45.0%
GTTGCTTCTTTCTCTTCTCG+TGG - Chr8:1061471-1061490 MsG0880041909.01.T01:intron 45.0%
TCAGGTGATCCATATCCTCT+TGG + Chr8:1061178-1061197 None:intergenic 45.0%
TCCCATTCCGAAAAAGTGGA+GGG - Chr8:1060553-1060572 MsG0880041909.01.T01:intron 45.0%
TGAGCATTACGGACAGCTAT+TGG + Chr8:1061148-1061167 None:intergenic 45.0%
TTCTATGATCGATCAGGCCT+TGG - Chr8:1060530-1060549 MsG0880041909.01.T01:intron 45.0%
TTGGGCAAGCTTGAGCATTA+CGG + Chr8:1061159-1061178 None:intergenic 45.0%
TTGGTCCCATTCCGAAAAAG+TGG - Chr8:1060549-1060568 MsG0880041909.01.T01:intron 45.0%
! GGAGAAAACTCAAGTTGCCA+TGG - Chr8:1061914-1061933 MsG0880041909.01.T01:CDS 45.0%
! GGTGAGTTTGCTTATGGATC+TGG - Chr8:1061774-1061793 MsG0880041909.01.T01:intron 45.0%
! TGTTTTGTGTGGAACACCAG+GGG - Chr8:1061239-1061258 MsG0880041909.01.T01:intron 45.0%
! TTGGCAGGTGAGTTTGCTTA+TGG - Chr8:1061768-1061787 MsG0880041909.01.T01:intron 45.0%
! TTGGTGGTTGGAGTCATAGA+TGG - Chr8:1059507-1059526 MsG0880041909.01.T01:CDS 45.0%
!! AGAGATGTGTGCTGGTTTGA+TGG + Chr8:1060038-1060057 None:intergenic 45.0%
!! ATTGAGAGTGGTTTGGTGGT+TGG - Chr8:1059495-1059514 MsG0880041909.01.T01:CDS 45.0%
!! CTGTAGGAGCATTGTTGTCA+TGG + Chr8:1061452-1061471 None:intergenic 45.0%
!! GAGTCATAGATGGCGGAATA+TGG - Chr8:1059517-1059536 MsG0880041909.01.T01:CDS 45.0%
!!! ACTTTTTCGGAATGGGACCA+AGG + Chr8:1060550-1060569 None:intergenic 45.0%
!!! CAAACTCCCCTCCACTTTTT+CGG + Chr8:1060563-1060582 None:intergenic 45.0%
!!! CTTGTTTTGTGTGGAACACC+AGG - Chr8:1061237-1061256 MsG0880041909.01.T01:intron 45.0%
AACACCAGGGGGTGAAGTAT+TGG - Chr8:1061251-1061270 MsG0880041909.01.T01:intron 50.0%
AATGCTCAAGCTTGCCCAAG+AGG - Chr8:1061160-1061179 MsG0880041909.01.T01:intron 50.0%
ACCACGGCAAAACCGGTTAA+TGG - Chr8:1061732-1061751 MsG0880041909.01.T01:intron 50.0%
AGATATAAGTGCCCCAGGAG+TGG - Chr8:1061527-1061546 MsG0880041909.01.T01:intron 50.0%
ATAGATGCTGGCGACCAATC+TGG + Chr8:1061696-1061715 None:intergenic 50.0%
ATCAACGGCAAGTGGAAGAG+AGG - Chr8:1060688-1060707 MsG0880041909.01.T01:CDS 50.0%
ATGGCATGTCCTCACATTGC+TGG - Chr8:1061642-1061661 MsG0880041909.01.T01:intron 50.0%
CAAGCTTGCCCAAGAGGATA+TGG - Chr8:1061166-1061185 MsG0880041909.01.T01:intron 50.0%
CAGAGTGCAAGAGACTATGG+TGG - Chr8:1060647-1060666 MsG0880041909.01.T01:CDS 50.0%
CATCATGACCACGGCAAAAC+CGG - Chr8:1061725-1061744 MsG0880041909.01.T01:intron 50.0%
CCAAAACAAGCTGTTGACCC+TGG - Chr8:1061807-1061826 MsG0880041909.01.T01:CDS 50.0%
CCCATTCCGAAAAAGTGGAG+GGG - Chr8:1060554-1060573 MsG0880041909.01.T01:intron 50.0%
GCAAGAGACTATGGTGGTCA+TGG - Chr8:1060653-1060672 MsG0880041909.01.T01:CDS 50.0%
GTCCCATTCCGAAAAAGTGG+AGG - Chr8:1060552-1060571 MsG0880041909.01.T01:intron 50.0%
GTGGTTGGAGTCATAGATGG+CGG - Chr8:1059510-1059529 MsG0880041909.01.T01:CDS 50.0%
TAAGCCAATACTTCACCCCC+TGG + Chr8:1061258-1061277 None:intergenic 50.0%
TGGCGCTAGAGGTGAATATG+CGG + Chr8:1061562-1061581 None:intergenic 50.0%
! ACTCCTGGGGCACTTATATC+TGG + Chr8:1061528-1061547 None:intergenic 50.0%
! GGTTTGATGGTTGAGGTGAG+AGG + Chr8:1060025-1060044 None:intergenic 50.0%
! GTTTTGTGTGGAACACCAGG+GGG - Chr8:1061240-1061259 MsG0880041909.01.T01:intron 50.0%
! TGAGAGGTGGAGGTGTGATA+AGG + Chr8:1060009-1060028 None:intergenic 50.0%
! TTGATGGTTGAGGTGAGAGG+TGG + Chr8:1060022-1060041 None:intergenic 50.0%
! TTTAGGACCGCTGTTTCCTG+CGG + Chr8:1060975-1060994 None:intergenic 50.0%
!! ACCATTAACCGGTTTTGCCG+TGG + Chr8:1061736-1061755 None:intergenic 50.0%
!! CCAGGGTCAACAGCTTGTTT+TGG + Chr8:1061810-1061829 None:intergenic 50.0%
!! GTAGGCTTTAGAGAGACCTG+AGG + Chr8:1061336-1061355 None:intergenic 50.0%
!! GTGTGCTGGTTTGATGGTTG+AGG + Chr8:1060032-1060051 None:intergenic 50.0%
!! GTGTTTCTAGCGTAGCACCT+TGG - Chr8:1061002-1061021 MsG0880041909.01.T01:intron 50.0%
!!! CCCCTCCACTTTTTCGGAAT+GGG + Chr8:1060557-1060576 None:intergenic 50.0%
!!! TCCCCTCCACTTTTTCGGAA+TGG + Chr8:1060558-1060577 None:intergenic 50.0%
AACGGCAAGTGGAAGAGAGG+TGG - Chr8:1060691-1060710 MsG0880041909.01.T01:CDS 55.0%
AAGTGGAGGGGAGTTTGTGC+AGG - Chr8:1060566-1060585 MsG0880041909.01.T01:intron 55.0%
ACAAGGTCGTGGGACTTCCT+TGG - Chr8:1059441-1059460 MsG0880041909.01.T01:CDS 55.0%
ACTTGCCGTTGATGCCGTGT+GGG + Chr8:1060681-1060700 None:intergenic 55.0%
ATGGTTGAGGTGAGAGGTGG+AGG + Chr8:1060019-1060038 None:intergenic 55.0%
ATTGGAGCAAGGTCGTACGG+CGG - Chr8:1060620-1060639 MsG0880041909.01.T01:CDS 55.0%
CGGCCAAGATATCCACTCCT+GGG + Chr8:1061542-1061561 None:intergenic 55.0%
GCAAGTGGAAGAGAGGTGGA+GGG - Chr8:1060695-1060714 MsG0880041909.01.T01:CDS 55.0%
GCAGCAACTCCAGCAATGTG+AGG + Chr8:1061654-1061673 None:intergenic 55.0%
GGCCAAGATATCCACTCCTG+GGG + Chr8:1061541-1061560 None:intergenic 55.0%
TGCCCCAGGAGTGGATATCT+TGG - Chr8:1061536-1061555 MsG0880041909.01.T01:intron 55.0%
TGGAACCCACACGGCATCAA+CGG - Chr8:1060673-1060692 MsG0880041909.01.T01:CDS 55.0%
TGGTGGTCATGGAACCCACA+CGG - Chr8:1060664-1060683 MsG0880041909.01.T01:CDS 55.0%
! CGGTTTTGCCGTGGTCATGA+TGG + Chr8:1061727-1061746 None:intergenic 55.0%
! GAGGTGGAGGTGTGATAAGG+AGG + Chr8:1060006-1060025 None:intergenic 55.0%
!! CTTGCAAAAGGCACCGCAAG+AGG - Chr8:1060734-1060753 MsG0880041909.01.T01:CDS 55.0%
AGACGGGACACCACCTCTTG+CGG + Chr8:1060750-1060769 None:intergenic 60.0%
CACACGGCATCAACGGCAAG+TGG - Chr8:1060680-1060699 MsG0880041909.01.T01:CDS 60.0%
CACTTGCCGTTGATGCCGTG+TGG + Chr8:1060682-1060701 None:intergenic 60.0%
GCGGCCAAGATATCCACTCC+TGG + Chr8:1061543-1061562 None:intergenic 60.0%
GGCAAGTGGAAGAGAGGTGG+AGG - Chr8:1060694-1060713 MsG0880041909.01.T01:CDS 60.0%
TCATCTGAGGGTGGCGCTAG+AGG + Chr8:1061573-1061592 None:intergenic 60.0%
TGGAGGGGAGTTTGTGCAGG+CGG - Chr8:1060569-1060588 MsG0880041909.01.T01:CDS 60.0%
!! GCAAAAGGCACCGCAAGAGG+TGG - Chr8:1060737-1060756 MsG0880041909.01.T01:CDS 60.0%
AGGGGAGTTTGTGCAGGCGG+TGG - Chr8:1060572-1060591 MsG0880041909.01.T01:CDS 65.0%
ATACTCACGGTGCAGGCCGC+AGG - Chr8:1060956-1060975 MsG0880041909.01.T01:intron 65.0%
GTGCAGGCCGCAGGAAACAG+CGG - Chr8:1060965-1060984 MsG0880041909.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 1059390 1061959 1059390 ID=MsG0880041909.01;Name=MsG0880041909.01
Chr8 mRNA 1059390 1061959 1059390 ID=MsG0880041909.01.T01;Parent=MsG0880041909.01;Name=MsG0880041909.01.T01;_AED=0.19;_eAED=0.19;_QI=0|0|0|1|1|1|4|0|475
Chr8 exon 1061782 1061959 1061782 ID=MsG0880041909.01.T01:exon:23;Parent=MsG0880041909.01.T01
Chr8 exon 1060568 1060803 1060568 ID=MsG0880041909.01.T01:exon:24;Parent=MsG0880041909.01.T01
Chr8 exon 1060147 1060459 1060147 ID=MsG0880041909.01.T01:exon:25;Parent=MsG0880041909.01.T01
Chr8 exon 1059390 1060090 1059390 ID=MsG0880041909.01.T01:exon:26;Parent=MsG0880041909.01.T01
Chr8 CDS 1061782 1061959 1061782 ID=MsG0880041909.01.T01:cds;Parent=MsG0880041909.01.T01
Chr8 CDS 1060568 1060803 1060568 ID=MsG0880041909.01.T01:cds;Parent=MsG0880041909.01.T01
Chr8 CDS 1060147 1060459 1060147 ID=MsG0880041909.01.T01:cds;Parent=MsG0880041909.01.T01
Chr8 CDS 1059390 1060090 1059390 ID=MsG0880041909.01.T01:cds;Parent=MsG0880041909.01.T01
Gene Sequence

>MsG0880041909.01.T01

ATGAGAGGTGTGGTCTCAGTTTTTCAATGCCAAAATTATCATCTAAAAACTACAAGGTCGTGGGACTTCCTTGGATTTCCTCAATCAATCAAAAGAGATCAATTCATTGAGAGTGGTTTGGTGGTTGGAGTCATAGATGGCGGAATATGGCCAGAATCTGAAAGTTTTACGGATAAAGGCCTTGGTCCCATTCCGAAAAAGTGGAGGGGAGTTTGTGCAGGCGGTGGTAATTTCACTTGCAACAAGAAGATTATTGGAGCAAGGTCGTACGGCGGTGATCAGAGTGCAAGAGACTATGGTGGTCATGGAACCCACACGGCATCAACGGCAAGTGGAAGAGAGGTGGAGGGAGTGAGCTTTTATGATCTTGCAAAAGGCACCGCAAGAGGTGGTGTCCCGTCTTCAAAGATTGCTCCAATTGCTGTAGAATTTCTAAAAGATCCTATTGCCATTGGTTCTTTTCATGCCATGGAAAAGGAAATACTCACGGTGCAGGCCGCAGGAAACAGCGGTCCTAAACCAAGTAGTGTTTCTAGCGTAGCACCTTGGTTATTTAGTATTGCTGCAACTACCGTAGATCGTCAATTCATTGATAAGCTCATTCTTGGAAATGGAAAGACTTTTATTGGTAAGTCAATTAATATTGTCCCCTCAAATGGCACAAAATTCCCAATAGCTGTCCGTAATGCTCAAGCTTGCCCAAGAGGATATGGATCACCTGAAATGTGGGGTGAAGTATTGGCTTATGCGAATGGTGCAATTGGTTCAATCCTTAATGTTACACATTCTAAAAATGATGCTCCTCAGGTCTCTCTAAAGCCTACACTTAACTTGGATACAAAGGACTATGTTCTAGTTCAATCTTACTCAAATTCCACAAAATACCCTGTAGCTGAAATTTTGAAGAGTGAAATCTTCCATGACAACAATGCTCCTACAGTTGCTTCTTTCTCTTCTCGTGGCCCAAATCCGTTGATTCTAGAAATTATGAAACCAGATATAAGTGCCCCAGGAGTGGATATCTTGGCCGCATATTCACCTCTAGCGCCACCCTCAGATGATATAAATGACAAAAGACAGGTCAAATACAGCATAGAATCTGGAACCTCTATGGCATGTCCTCACATTGCTGGAGTTGCTGCATATGTGAAATCATTTCATCCAGATTGGTCGCCAGCATCTATCAAATCTGCCATCATGACCACGGCAAAACCGGTTAATGGTACTTATAATGATTTGGCAGGTGAGTTTGCTTATGGATCTGGGAATGTCAATCCAAAACAAGCTGTTGACCCTGGACTTGTTTATGACATCACTAAGGAAGATTATGTTCGGATGCTTTGTAATTATGGTTATGATACTAACAAATTAAATATATTAGTGGAGAAAACTCAAGTTGCCATGGAGCTTCCAATAGATCCTTTGTGA

Protein sequence

>MsG0880041909.01.T01

MRGVVSVFQCQNYHLKTTRSWDFLGFPQSIKRDQFIESGLVVGVIDGGIWPESESFTDKGLGPIPKKWRGVCAGGGNFTCNKKIIGARSYGGDQSARDYGGHGTHTASTASGREVEGVSFYDLAKGTARGGVPSSKIAPIAVEFLKDPIAIGSFHAMEKEILTVQAAGNSGPKPSSVSSVAPWLFSIAATTVDRQFIDKLILGNGKTFIGKSINIVPSNGTKFPIAVRNAQACPRGYGSPEMWGEVLAYANGAIGSILNVTHSKNDAPQVSLKPTLNLDTKDYVLVQSYSNSTKYPVAEILKSEIFHDNNAPTVASFSSRGPNPLILEIMKPDISAPGVDILAAYSPLAPPSDDINDKRQVKYSIESGTSMACPHIAGVAAYVKSFHPDWSPASIKSAIMTTAKPVNGTYNDLAGEFAYGSGNVNPKQAVDPGLVYDITKEDYVRMLCNYGYDTNKLNILVEKTQVAMELPIDPL*