AlfalfaGEDB | MsG0380017607.01

M. sativa cultivar ZhongmuNo.1 / MsG0380017607.01

KEGG: K14488
GO: GO:0009733
PFAM: PF02519

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017607.01.T01	RHN70824.1	94.667	150	8	0	1	150	1	150	2.31E-101	297

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017607.01.T01	P33080	67.742	93	28	2	59	150	1	92	1.16E-41	137

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017607.01.T01	A0A396J2A5	94.667	150	8	0	1	150	1	150	1.10e-101	297

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047957.01	MsG0380017607.01	0.810970	8.844386e-51	5.408087e-48
MsG0180000114.01	MsG0380017607.01	0.801264	9.775144e-49	4.647824e-46
MsG0180000470.01	MsG0380017607.01	0.804691	1.913195e-49	9.929192e-47
MsG0180000703.01	MsG0380017607.01	0.813319	2.717827e-51	1.769134e-48
MsG0180000777.01	MsG0380017607.01	0.826965	2.030453e-54	1.933391e-51
MsG0180000814.01	MsG0380017607.01	0.820206	7.753849e-53	6.095953e-50
MsG0180000914.01	MsG0380017607.01	0.810677	1.023435e-50	6.208739e-48
MsG0180001088.01	MsG0380017607.01	0.808630	2.817500e-50	1.619002e-47
MsG0180001381.01	MsG0380017607.01	0.817204	3.722877e-52	2.693835e-49
MsG0180001886.01	MsG0380017607.01	0.809201	2.126632e-50	1.240812e-47
MsG0180004331.01	MsG0380017607.01	0.804498	2.099123e-49	1.083934e-46
MsG0180004486.01	MsG0380017607.01	0.808627	2.821868e-50	1.621382e-47
MsG0180004765.01	MsG0380017607.01	0.828374	9.316124e-55	9.242809e-52
MsG0180005250.01	MsG0380017607.01	0.810716	1.003989e-50	6.097144e-48
MsG0180005445.01	MsG0380017607.01	0.801784	7.644927e-49	3.683047e-46
MsG0180006224.01	MsG0380017607.01	0.814331	1.626640e-51	1.088330e-48
MsG0280006324.01	MsG0380017607.01	0.800918	1.150352e-48	5.422233e-46
MsG0280010722.01	MsG0380017607.01	0.855111	7.855901e-62	1.793780e-58
MsG0280011109.01	MsG0380017607.01	0.812844	3.454578e-51	2.219966e-48
MsG0380014225.01	MsG0380017607.01	-0.808847	2.532461e-50	1.463556e-47
MsG0380014248.01	MsG0380017607.01	0.808256	3.386177e-50	1.927004e-47
MsG0380014537.01	MsG0380017607.01	0.812824	3.490536e-51	2.241846e-48
MsG0380014706.01	MsG0380017607.01	0.816165	6.364966e-52	4.476616e-49
MsG0380014866.01	MsG0380017607.01	0.800104	1.685777e-48	7.783043e-46
MsG0380015497.01	MsG0380017607.01	0.824024	1.009573e-53	8.837266e-51
MsG0380016407.01	MsG0380017607.01	0.818436	1.961885e-52	1.468626e-49
MsG0380016740.01	MsG0380017607.01	0.809342	1.983726e-50	1.161782e-47
MsG0380017607.01	MsG0480018236.01	0.823101	1.660716e-53	1.416447e-50
MsG0380017607.01	MsG0480018883.01	0.810659	1.032797e-50	6.262432e-48
MsG0380017607.01	MsG0480019035.01	0.802146	6.442921e-49	3.132668e-46
MsG0380017607.01	MsG0480020505.01	0.803605	3.219553e-49	1.624900e-46
MsG0380017607.01	MsG0480020765.01	0.809198	2.130319e-50	1.242836e-47
MsG0380017607.01	MsG0480020887.01	0.810813	9.562296e-51	5.822100e-48
MsG0380017607.01	MsG0480020916.01	0.806015	1.010011e-49	5.423440e-47
MsG0380017607.01	MsG0480021418.01	0.803424	3.509003e-49	1.762745e-46
MsG0380017607.01	MsG0480022259.01	0.803136	4.025273e-49	2.007134e-46
MsG0380017607.01	MsG0480022476.01	0.801417	9.093376e-49	4.340339e-46
MsG0380017607.01	MsG0480023251.01	0.822588	2.186142e-53	1.837838e-50
MsG0380017607.01	MsG0580024790.01	-0.805682	1.186398e-49	6.316404e-47
MsG0380017607.01	MsG0580025587.01	0.800857	1.183536e-48	5.570051e-46
MsG0380017607.01	MsG0580025987.01	0.827237	1.747881e-54	1.677593e-51
MsG0380017607.01	MsG0580029236.01	0.803046	4.202013e-49	2.090397e-46
MsG0380017607.01	MsG0580029376.01	0.818012	2.446946e-52	1.810249e-49
MsG0380017607.01	MsG0580029999.01	-0.840249	9.745429e-58	1.380094e-54
MsG0380017607.01	MsG0680030413.01	0.815325	9.793342e-52	6.731119e-49
MsG0380017607.01	MsG0680030880.01	0.838374	2.987627e-57	3.993800e-54
MsG0380017607.01	MsG0680031815.01	0.800534	1.377851e-48	6.431172e-46
MsG0380017607.01	MsG0680034655.01	0.818446	1.951593e-52	1.461357e-49
MsG0380017607.01	MsG0680034739.01	0.827537	1.480868e-54	1.433690e-51
MsG0380017607.01	MsG0680035340.01	0.801612	8.292697e-49	3.977628e-46
MsG0380017607.01	MsG0680035580.01	0.820746	5.828820e-53	4.651481e-50
MsG0380017607.01	MsG0780036128.01	0.801781	7.659193e-49	3.689496e-46
MsG0380017607.01	MsG0780036602.01	0.810640	1.042569e-50	6.318421e-48
MsG0380017607.01	MsG0780038644.01	0.803897	2.799874e-49	1.423767e-46
MsG0380017607.01	MsG0780038907.01	0.835078	2.069056e-56	2.502658e-53
MsG0380017607.01	MsG0780039443.01	0.820058	8.380927e-53	6.562465e-50
MsG0380017607.01	MsG0780039832.01	0.804035	2.620951e-49	1.337479e-46
MsG0380017607.01	MsG0780039867.01	-0.817692	2.889917e-52	2.119296e-49
MsG0380017607.01	MsG0780040254.01	0.825665	4.140350e-54	3.798470e-51
MsG0380017607.01	MsG0780041432.01	0.839193	1.834264e-57	2.514074e-54
MsG0380017607.01	MsG0780041440.01	0.814468	1.517506e-51	1.019108e-48
MsG0380017607.01	MsG0780041482.01	0.801499	8.748711e-49	4.184618e-46
MsG0380017607.01	MsG0880043292.01	0.805713	1.169036e-49	6.229014e-47
MsG0380017607.01	MsG0880043480.01	0.812503	4.103036e-51	2.613299e-48
MsG0380017607.01	MsG0880045613.01	0.801981	6.967645e-49	3.373390e-46
MsG0380017607.01	MsG0880045765.01	0.821446	4.019779e-53	3.271070e-50
MsG0380017607.01	MsG0880046457.01	0.801840	7.445594e-49	3.592206e-46
MsG0380017607.01	MsG0880046620.01	0.801434	9.021653e-49	4.307944e-46
MsG0380017607.01	MsG0880046790.01	0.807554	4.776558e-50	2.668432e-47
MsG0380017607.01	MsG0880046967.01	0.815811	7.636287e-52	5.318906e-49
MsG0380017607.01	MsG0880047294.01	0.802212	6.244347e-49	3.041160e-46
MsG0280006461.01	MsG0380017607.01	0.805793	1.124460e-49	6.003666e-47
MsG0280006491.01	MsG0380017607.01	0.823683	1.214139e-53	1.052792e-50
MsG0280006593.01	MsG0380017607.01	0.801541	8.578700e-49	4.107446e-46
MsG0280006601.01	MsG0380017607.01	0.822258	2.607967e-53	2.171709e-50
MsG0280007547.01	MsG0380017607.01	0.832269	1.040876e-55	1.157416e-52
MsG0280007955.01	MsG0380017607.01	0.805850	1.093696e-49	5.848204e-47
MsG0280008112.01	MsG0380017607.01	0.825651	4.173323e-54	3.827146e-51
MsG0280008113.01	MsG0380017607.01	0.800977	1.118646e-48	5.280839e-46
MsG0280008377.01	MsG0380017607.01	0.805542	1.269250e-49	6.732828e-47
MsG0280008894.01	MsG0380017607.01	0.810683	1.020503e-50	6.191882e-48
MsG0280009350.01	MsG0380017607.01	0.808239	3.414561e-50	1.942262e-47
MsG0280010349.01	MsG0380017607.01	0.800513	1.391664e-48	6.492193e-46
MsG0280010517.01	MsG0380017607.01	0.808104	3.648981e-50	2.068110e-47

PPI

Gene1	Gene2	Type
MsG0480021386.01	MsG0380017607.01	PPI
MsG0380017607.01	MsG0480021386.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017607.01.T01	MTR_3g110038	96.739	92	3	0	59	150	1	92	5.10e-63	188
MsG0380017607.01.T01	MTR_3g084170	93.478	92	6	0	59	150	1	92	9.42e-61	182
MsG0380017607.01.T01	MTR_3g084240	92.391	92	7	0	59	150	1	92	1.29e-59	179
MsG0380017607.01.T01	MTR_3g084220	91.304	92	8	0	59	150	1	92	5.32e-59	178
MsG0380017607.01.T01	MTR_3g084150	84.946	93	12	2	59	150	1	92	2.93e-54	166
MsG0380017607.01.T01	MTR_8g461410	83.871	93	13	2	59	150	1	92	6.44e-54	165
MsG0380017607.01.T01	MTR_4g050700	83.871	93	14	1	59	150	1	93	8.64e-54	165
MsG0380017607.01.T01	MTR_2g012410	83.871	93	14	1	59	150	1	93	8.64e-54	165
MsG0380017607.01.T01	MTR_3g084180	83.871	93	13	2	59	150	1	92	4.29e-53	163
MsG0380017607.01.T01	MTR_3g110032	81.720	93	16	1	59	150	1	93	2.97e-51	158
MsG0380017607.01.T01	MTR_3g084260	82.418	91	15	1	59	148	1	91	1.85e-50	156
MsG0380017607.01.T01	MTR_3g110042	82.955	88	13	2	59	145	1	87	1.65e-48	151
MsG0380017607.01.T01	MTR_3g117630	78.889	90	18	1	62	150	3	92	6.41e-48	150
MsG0380017607.01.T01	MTR_4g072250	74.194	93	22	2	59	150	1	92	1.29e-46	147
MsG0380017607.01.T01	MTR_4g072880	70.968	93	26	1	59	150	1	93	1.99e-46	146
MsG0380017607.01.T01	MTR_4g072310	72.043	93	25	1	59	150	1	93	2.10e-46	146
MsG0380017607.01.T01	MTR_4g072270	72.043	93	25	1	59	150	1	93	8.52e-46	144
MsG0380017607.01.T01	MTR_4g072370	74.444	90	21	1	59	148	1	88	4.07e-45	143
MsG0380017607.01.T01	MTR_4g072870	71.429	91	25	1	59	148	1	91	6.15e-45	142
MsG0380017607.01.T01	MTR_4g072330	73.333	90	22	1	59	148	1	88	1.07e-44	142
MsG0380017607.01.T01	MTR_3g084200	90.278	72	7	0	59	130	1	72	4.65e-44	140
MsG0380017607.01.T01	MTR_4g072240	71.429	91	25	1	59	148	1	91	4.86e-44	140
MsG0380017607.01.T01	MTR_4g072220	70.968	93	26	1	59	150	1	93	6.29e-44	140
MsG0380017607.01.T01	MTR_4g072260	69.892	93	27	1	59	150	1	93	7.17e-44	140
MsG0380017607.01.T01	MTR_4g072860	72.043	93	25	1	59	150	1	93	9.42e-44	139
MsG0380017607.01.T01	MTR_4g072740	72.222	90	20	1	59	148	1	85	1.23e-43	139
MsG0380017607.01.T01	MTR_4g072230	72.043	93	23	2	59	150	1	91	1.55e-43	139
MsG0380017607.01.T01	MTR_4g072300	71.429	91	25	1	59	148	1	91	1.69e-43	139
MsG0380017607.01.T01	MTR_4g072830	75.281	89	20	1	59	147	1	87	1.77e-43	139
MsG0380017607.01.T01	MTR_4g072470	72.222	90	20	1	59	148	1	85	2.61e-43	138
MsG0380017607.01.T01	MTR_4g072890	71.429	91	25	1	59	148	1	91	3.45e-43	138
MsG0380017607.01.T01	MTR_4g072580	71.111	90	21	1	59	148	1	85	4.20e-43	137
MsG0380017607.01.T01	MTR_4g072490	70.000	90	22	1	59	148	1	85	8.43e-43	137
MsG0380017607.01.T01	MTR_4g072640	72.826	92	23	2	59	149	1	91	2.43e-42	136
MsG0380017607.01.T01	MTR_4g072500	70.968	93	25	2	59	150	1	92	2.90e-42	135
MsG0380017607.01.T01	MTR_4g072850	71.277	94	25	1	59	150	1	94	5.56e-42	135
MsG0380017607.01.T01	MTR_4g072630	70.000	90	23	1	59	148	1	86	1.92e-41	133
MsG0380017607.01.T01	MTR_4g072530	70.330	91	25	2	59	148	1	90	3.94e-41	132
MsG0380017607.01.T01	MTR_4g072610	71.111	90	20	2	59	148	1	84	5.92e-41	132
MsG0380017607.01.T01	MTR_4g072730	66.667	90	30	0	59	148	1	90	8.51e-41	132
MsG0380017607.01.T01	MTR_4g072480	65.217	92	32	0	59	150	1	92	9.29e-41	132
MsG0380017607.01.T01	MTR_3g084250	67.742	93	28	2	59	150	1	92	1.39e-40	131
MsG0380017607.01.T01	MTR_4g072620	64.130	92	33	0	59	150	1	92	3.53e-40	130
MsG0380017607.01.T01	MTR_4g072680	65.217	92	32	0	59	150	1	92	4.20e-40	130
MsG0380017607.01.T01	MTR_4g072465	66.667	90	26	1	59	148	1	86	4.78e-40	130
MsG0380017607.01.T01	MTR_4g072650	70.330	91	21	2	59	149	1	85	4.83e-40	130
MsG0380017607.01.T01	MTR_4g072570	65.217	92	32	0	59	150	1	92	9.64e-40	129
MsG0380017607.01.T01	MTR_4g072670	68.889	90	24	1	59	148	1	86	4.45e-39	127
MsG0380017607.01.T01	MTR_4g072540	68.889	90	24	1	59	148	1	86	6.52e-39	127
MsG0380017607.01.T01	MTR_4g072600	68.966	87	22	1	59	145	1	82	1.31e-38	126
MsG0380017607.01.T01	MTR_4g072460	63.043	92	34	0	59	150	1	92	2.27e-38	125
MsG0380017607.01.T01	MTR_4g072660	65.217	92	27	1	59	150	1	87	2.66e-38	125
MsG0380017607.01.T01	MTR_4g072820	67.778	90	24	2	59	148	1	85	4.93e-38	125
MsG0380017607.01.T01	MTR_4g072510	68.889	90	24	1	59	148	1	86	7.46e-38	124
MsG0380017607.01.T01	MTR_4g072940	69.565	92	26	1	61	150	33	124	3.30e-37	124
MsG0380017607.01.T01	MTR_3g084210	63.043	92	34	0	59	150	1	92	5.40e-37	122
MsG0380017607.01.T01	MTR_4g072380	67.778	90	25	1	59	148	1	86	6.26e-37	122
MsG0380017607.01.T01	MTR_3g084190	63.043	92	34	0	59	150	1	92	7.41e-37	122
MsG0380017607.01.T01	MTR_4g072720	66.667	90	26	1	59	148	1	86	1.87e-36	120
MsG0380017607.01.T01	MTR_4g072590	67.778	90	24	1	59	148	1	85	1.99e-36	120
MsG0380017607.01.T01	MTR_8g461420	60.870	92	36	0	59	150	1	92	3.65e-36	120
MsG0380017607.01.T01	MTR_3g084230	60.870	92	36	0	59	150	1	92	1.14e-35	119
MsG0380017607.01.T01	MTR_5g008350	69.620	79	19	1	59	137	1	74	2.18e-35	118
MsG0380017607.01.T01	MTR_3g084160	61.957	92	35	0	59	150	1	92	2.24e-35	118
MsG0380017607.01.T01	MTR_4g072690	67.778	90	24	1	59	148	1	85	3.63e-35	117
MsG0380017607.01.T01	MTR_3g110045	61.458	96	37	0	55	150	56	151	4.88e-35	119
MsG0380017607.01.T01	MTR_8g461400	66.304	92	5	1	59	150	1	66	6.43e-35	116
MsG0380017607.01.T01	MTR_5g008360	71.622	74	21	0	77	150	10	83	8.97e-35	116
MsG0380017607.01.T01	MTR_5g008370	63.441	93	28	2	59	148	1	90	4.11e-34	116
MsG0380017607.01.T01	MTR_4g072450	65.556	90	26	1	59	148	1	85	1.71e-33	113
MsG0380017607.01.T01	MTR_4g072550	60.870	92	33	1	62	150	12	103	2.04e-33	114
MsG0380017607.01.T01	MTR_4g072980	56.842	95	38	2	59	150	1	95	3.07e-33	113
MsG0380017607.01.T01	MTR_4g072560	52.041	98	39	3	59	148	1	98	3.62e-30	105
MsG0380017607.01.T01	MTR_4g072770	69.697	66	20	0	83	148	15	80	1.38e-29	103
MsG0380017607.01.T01	MTR_4g072910	63.380	71	26	0	78	148	30	100	4.64e-29	102
MsG0380017607.01.T01	MTR_3g117640	50.000	100	40	2	59	148	1	100	1.32e-28	101
MsG0380017607.01.T01	MTR_4g072290	55.435	92	28	2	59	150	1	79	1.00e-27	98.6
MsG0380017607.01.T01	MTR_4g072280	64.000	75	26	1	59	132	1	75	2.06e-26	95.5
MsG0380017607.01.T01	MTR_3g110035	63.636	66	24	0	85	150	73	138	3.93e-25	94.0
MsG0380017607.01.T01	MTR_4g072750	63.514	74	23	2	59	129	1	73	2.48e-24	90.1
MsG0380017607.01.T01	MTR_3g113310	56.923	65	27	1	81	145	40	103	4.27e-23	87.8
MsG0380017607.01.T01	MTR_4g072930	51.852	81	33	2	74	148	30	110	2.27e-22	85.9
MsG0380017607.01.T01	MTR_3g117610	58.462	65	26	1	81	145	43	106	2.62e-22	85.9
MsG0380017607.01.T01	MTR_6g077850	52.239	67	32	0	82	148	33	99	1.07e-21	84.0
MsG0380017607.01.T01	MTR_4g072190	48.193	83	41	2	63	145	17	97	2.07e-21	83.2
MsG0380017607.01.T01	MTR_4g072840	51.724	87	12	4	59	145	1	57	5.23e-19	75.9
MsG0380017607.01.T01	MTR_1g094750	45.545	101	49	3	47	143	11	109	5.19e-18	75.1
MsG0380017607.01.T01	MTR_8g076040	51.562	64	30	1	82	145	40	102	5.29e-18	74.7
MsG0380017607.01.T01	MTR_4g005310	40.000	105	57	3	45	143	19	123	5.68e-18	75.9
MsG0380017607.01.T01	MTR_5g021820	51.562	64	30	1	82	145	39	101	5.86e-18	74.3
MsG0380017607.01.T01	MTR_2g043960	53.226	62	28	1	82	143	75	135	2.23e-17	74.7
MsG0380017607.01.T01	MTR_4g124750	51.613	62	29	1	82	143	68	128	1.59e-16	72.0
MsG0380017607.01.T01	MTR_1g009150	54.839	62	27	1	82	143	70	130	4.84e-16	71.6
MsG0380017607.01.T01	MTR_4g005320	52.459	61	28	1	83	143	70	129	3.24e-15	68.9
MsG0380017607.01.T01	MTR_0388s0020	44.286	70	35	2	69	135	61	129	4.33e-14	65.9
MsG0380017607.01.T01	MTR_3g105900	80.556	36	7	0	82	117	1171	1206	1.06e-13	67.8
MsG0380017607.01.T01	MTR_8g461210	52.542	59	27	1	82	140	34	91	1.36e-13	63.5
MsG0380017607.01.T01	MTR_3g109160	54.098	61	27	1	83	143	69	128	1.78e-13	64.7
MsG0380017607.01.T01	MTR_7g118010	42.466	73	39	2	75	145	15	86	2.91e-13	62.4
MsG0380017607.01.T01	MTR_1g024085	47.761	67	34	1	74	140	28	93	3.72e-13	63.2
MsG0380017607.01.T01	MTR_4g072160	47.826	69	30	3	82	146	36	102	7.27e-13	62.4
MsG0380017607.01.T01	MTR_3g097120	40.244	82	40	2	76	149	2	82	2.26e-12	60.1
MsG0380017607.01.T01	MTR_3g092220	47.541	61	29	2	82	140	32	91	2.32e-12	60.5
MsG0380017607.01.T01	MTR_3g098970	32.500	80	53	1	71	150	41	119	3.19e-12	60.8
MsG0380017607.01.T01	MTR_1g061570	48.387	62	31	1	82	143	18	78	3.67e-12	60.1
MsG0380017607.01.T01	MTR_8g026730	42.424	66	35	2	82	145	26	90	1.02e-11	58.5
MsG0380017607.01.T01	MTR_7g405740	45.902	61	32	1	83	143	67	126	2.19e-11	58.9
MsG0380017607.01.T01	MTR_7g101740	45.312	64	34	1	82	145	39	101	2.28e-11	57.8
MsG0380017607.01.T01	MTR_8g101520	37.079	89	50	2	66	149	28	115	2.67e-11	58.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017607.01.T01	AT4G38840	72.059	68	18	1	82	148	32	99	2.69e-34	115
MsG0380017607.01.T01	AT5G18020	62.338	77	28	1	74	149	15	91	4.29e-32	110
MsG0380017607.01.T01	AT5G18050	61.842	76	28	1	74	148	15	90	3.90e-31	107
MsG0380017607.01.T01	AT5G18060	61.842	76	28	1	74	148	15	90	6.58e-31	107
MsG0380017607.01.T01	AT5G18080	61.842	76	28	1	74	148	15	90	2.11e-30	105
MsG0380017607.01.T01	AT5G18030	65.672	67	22	1	83	148	22	88	4.77e-30	104
MsG0380017607.01.T01	AT2G21200	62.500	72	26	1	77	147	15	86	1.56e-29	103
MsG0380017607.01.T01	AT5G18010	59.211	76	30	1	74	148	15	90	5.38e-29	102
MsG0380017607.01.T01	AT2G21210	56.410	78	32	1	73	148	18	95	6.68e-29	102
MsG0380017607.01.T01	AT4G38825	61.111	72	27	1	78	148	18	89	6.94e-29	102
MsG0380017607.01.T01	AT4G34770	72.727	66	16	1	77	140	29	94	1.68e-28	101
MsG0380017607.01.T01	AT2G21210	46.087	115	51	3	45	148	48	162	3.65e-28	102
MsG0380017607.01.T01	AT3G03840	59.722	72	27	1	79	148	23	94	1.18e-26	96.7
MsG0380017607.01.T01	AT4G34800	53.488	86	33	2	59	141	1	82	1.95e-26	95.9
MsG0380017607.01.T01	AT4G34810	61.765	68	22	1	82	145	47	114	2.70e-26	96.3
MsG0380017607.01.T01	AT4G38850	54.118	85	27	2	67	148	14	89	3.22e-26	95.1
MsG0380017607.01.T01	AT3G03820	52.874	87	38	1	65	148	9	95	3.44e-26	95.5
MsG0380017607.01.T01	AT3G03850	62.687	67	23	1	84	148	26	92	8.78e-26	94.4
MsG0380017607.01.T01	AT3G03830	49.451	91	38	2	66	148	2	92	4.04e-25	92.4
MsG0380017607.01.T01	AT4G13790	50.000	82	34	2	67	146	14	90	6.53e-24	89.4
MsG0380017607.01.T01	AT4G34780	53.846	78	33	1	75	149	20	97	1.74e-23	88.6
MsG0380017607.01.T01	AT4G34790	63.492	63	21	1	83	143	39	101	4.78e-23	87.8
MsG0380017607.01.T01	AT4G38860	56.923	65	28	0	81	145	38	102	2.63e-22	85.9
MsG0380017607.01.T01	AT1G75580	52.703	74	34	1	72	145	33	105	1.14e-21	84.3
MsG0380017607.01.T01	AT4G34760	55.385	65	28	1	81	145	41	104	2.06e-20	80.9
MsG0380017607.01.T01	AT2G21220	52.308	65	30	1	81	145	38	101	9.03e-20	79.3
MsG0380017607.01.T01	AT4G36110	51.515	66	31	1	82	147	39	103	7.66e-19	76.6
MsG0380017607.01.T01	AT3G20220	54.545	66	28	2	83	147	47	111	8.05e-19	77.0
MsG0380017607.01.T01	AT2G16580	52.308	65	30	1	81	145	42	105	2.72e-18	75.5
MsG0380017607.01.T01	AT2G18010	50.000	66	32	1	82	147	47	111	6.42e-18	74.7
MsG0380017607.01.T01	AT1G19830	58.333	60	24	1	81	140	46	104	8.38e-18	74.3
MsG0380017607.01.T01	AT3G43120	51.613	62	29	1	82	143	78	138	1.42e-17	75.1
MsG0380017607.01.T01	AT5G20810	53.226	62	28	1	82	143	78	138	9.70e-17	73.2
MsG0380017607.01.T01	AT5G20810	53.226	62	28	1	82	143	78	138	2.09e-16	72.8
MsG0380017607.01.T01	AT5G10990	47.222	72	37	1	69	140	27	97	7.24e-15	67.8
MsG0380017607.01.T01	AT1G75590	47.619	84	38	3	62	140	16	98	1.14e-14	67.4
MsG0380017607.01.T01	AT4G34750	41.026	78	45	1	68	145	22	98	1.64e-14	67.0
MsG0380017607.01.T01	AT4G34750	41.026	78	45	1	68	145	22	98	1.64e-14	67.0
MsG0380017607.01.T01	AT5G66260	42.391	92	49	2	60	148	8	98	1.98e-14	65.5
MsG0380017607.01.T01	AT1G19840	45.783	83	40	2	62	140	16	97	4.78e-14	65.9
MsG0380017607.01.T01	AT2G46690	41.892	74	39	2	75	145	16	88	2.52e-13	63.2
MsG0380017607.01.T01	AT3G51200	50.820	61	28	2	82	141	38	97	2.55e-13	62.8
MsG0380017607.01.T01	AT2G24400	50.000	66	32	1	78	143	59	123	2.66e-13	64.3
MsG0380017607.01.T01	AT4G31320	50.820	61	29	1	83	143	80	139	3.23e-13	64.3
MsG0380017607.01.T01	AT2G37030	39.744	78	44	2	69	144	33	109	1.17e-12	61.2
MsG0380017607.01.T01	AT3G61900	38.095	84	48	2	68	148	15	97	1.89e-12	61.2
MsG0380017607.01.T01	AT3G12830	40.000	75	44	1	69	143	36	109	6.06e-12	59.7
MsG0380017607.01.T01	AT5G53590	39.726	73	38	2	82	149	45	116	2.34e-11	58.5
MsG0380017607.01.T01	AT3G60690	40.580	69	37	2	83	148	88	155	3.30e-11	58.5
MsG0380017607.01.T01	AT4G00880	47.692	65	31	2	83	145	28	91	3.50e-11	57.4
MsG0380017607.01.T01	AT2G45210	38.889	72	40	2	79	147	75	145	6.72e-11	57.8

Find 32 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTAGAGAAATGATTGCTAAA+AGG	0.302475	3:-98410241	None:intergenic
TTTCTTCAAAACATTTGAAA+TGG	0.314323	3:+98410385	MsG0380017607.01.T01:CDS
GTCTAATAGCTGCAGGTAAA+CGG	0.409491	3:-98410412	None:intergenic
TTCTTCAAAACATTTGAAAT+GGG	0.428875	3:+98410386	MsG0380017607.01.T01:CDS
AATCAAGTGGAGGAAGAATT+CGG	0.436017	3:+98410575	MsG0380017607.01.T01:CDS
AGCAATCATTTCTCTAACAA+AGG	0.437088	3:+98410247	MsG0380017607.01.T01:CDS
GCAATCATTTCTCTAACAAA+GGG	0.455497	3:+98410248	MsG0380017607.01.T01:CDS
AAGGGATTTCAAGAAACTCT+TGG	0.478470	3:+98410266	MsG0380017607.01.T01:CDS
AGAAATGATTGCTAAAAGGA+TGG	0.487399	3:-98410237	None:intergenic
TCAAAACTTGTTGAATCAAG+TGG	0.492846	3:+98410562	MsG0380017607.01.T01:CDS
GTGATTTGTGATTGTTGTGA+AGG	0.494093	3:-98410310	None:intergenic
GAAGCTCGTCTAATAGCTGC+AGG	0.514149	3:-98410419	None:intergenic
ATCACTCAAGAAATCAAACT+TGG	0.520865	3:+98410328	MsG0380017607.01.T01:CDS
TTCGGATATGATCATCCAAT+GGG	0.523692	3:+98410593	MsG0380017607.01.T01:CDS
GAAATGATTGCTAAAAGGAT+GGG	0.533611	3:-98410236	None:intergenic
AAAAGTATTGAATGTGCCAA+AGG	0.534600	3:+98410463	MsG0380017607.01.T01:CDS
GGAATTGTGAGGCCACCCAT+TGG	0.542714	3:-98410608	None:intergenic
TACACTGCAAGATAACCCTT+TGG	0.544929	3:-98410479	None:intergenic
AAAGTATTGAATGTGCCAAA+GGG	0.556385	3:+98410464	MsG0380017607.01.T01:CDS
GGTTATCTTGCAGTGTACGT+TGG	0.557125	3:+98410485	MsG0380017607.01.T01:CDS
ATTTGTGATTGTTGTGAAGG+AGG	0.567900	3:-98410307	None:intergenic
ATTCGGATATGATCATCCAA+TGG	0.569256	3:+98410592	MsG0380017607.01.T01:CDS
AAGAAAACATCTTCTGTGCA+AGG	0.580973	3:-98410629	None:intergenic
AAATGATTGCTAAAAGGATG+GGG	0.587090	3:-98410235	None:intergenic
AGCTTGGTTCAAGTATGACA+TGG	0.610689	3:-98410534	None:intergenic
AAACTTGTTGAATCAAGTGG+AGG	0.613536	3:+98410565	MsG0380017607.01.T01:CDS
GCTTGGTTCAAGTATGACAT+GGG	0.618074	3:-98410533	None:intergenic
GGATATGATCATCCAATGGG+TGG	0.663522	3:+98410596	MsG0380017607.01.T01:CDS
CTTGGTTCAAGTATGACATG+GGG	0.689184	3:-98410532	None:intergenic
AATGATTGCTAAAAGGATGG+GGG	0.708604	3:-98410234	None:intergenic
ACGTTGGAGAGCAAATGAAG+CGG	0.725765	3:+98410501	MsG0380017607.01.T01:CDS
CTTCTGTGCAAGGAATTGTG+AGG	0.738315	3:-98410619	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTCTTCAAAACATTTGAAA+TGG	+	Chr3:98410385-98410404	MsG0380017607.01.T01:CDS	20.0%
!!!	TTCTTCAAAACATTTGAAAT+GGG	+	Chr3:98410386-98410405	MsG0380017607.01.T01:CDS	20.0%
!	TTAGAGAAATGATTGCTAAA+AGG	-	Chr3:98410244-98410263	None:intergenic	25.0%
!!	CATTCAATACTTTTGATGTT+TGG	-	Chr3:98410457-98410476	None:intergenic	25.0%
	AAATGATTGCTAAAAGGATG+GGG	-	Chr3:98410238-98410257	None:intergenic	30.0%
	AGAAATGATTGCTAAAAGGA+TGG	-	Chr3:98410240-98410259	None:intergenic	30.0%
	AGCAATCATTTCTCTAACAA+AGG	+	Chr3:98410247-98410266	MsG0380017607.01.T01:CDS	30.0%
	ATCACTCAAGAAATCAAACT+TGG	+	Chr3:98410328-98410347	MsG0380017607.01.T01:CDS	30.0%
	GAAATGATTGCTAAAAGGAT+GGG	-	Chr3:98410239-98410258	None:intergenic	30.0%
	GCAATCATTTCTCTAACAAA+GGG	+	Chr3:98410248-98410267	MsG0380017607.01.T01:CDS	30.0%
!!	AAAAGTATTGAATGTGCCAA+AGG	+	Chr3:98410463-98410482	MsG0380017607.01.T01:CDS	30.0%
!!	AAAGTATTGAATGTGCCAAA+GGG	+	Chr3:98410464-98410483	MsG0380017607.01.T01:CDS	30.0%
!!	TCAAAACTTGTTGAATCAAG+TGG	+	Chr3:98410562-98410581	MsG0380017607.01.T01:CDS	30.0%
!!!	ACAAGTTTTGAAATGAAGCT+TGG	-	Chr3:98410553-98410572	None:intergenic	30.0%
	AAGAAAACATCTTCTGTGCA+AGG	-	Chr3:98410632-98410651	None:intergenic	35.0%
	AAGGGATTTCAAGAAACTCT+TGG	+	Chr3:98410266-98410285	MsG0380017607.01.T01:CDS	35.0%
	AATCAAGTGGAGGAAGAATT+CGG	+	Chr3:98410575-98410594	MsG0380017607.01.T01:CDS	35.0%
	AATGATTGCTAAAAGGATGG+GGG	-	Chr3:98410237-98410256	None:intergenic	35.0%
	ATTCGGATATGATCATCCAA+TGG	+	Chr3:98410592-98410611	MsG0380017607.01.T01:CDS	35.0%
	ATTTGTGATTGTTGTGAAGG+AGG	-	Chr3:98410310-98410329	None:intergenic	35.0%
	TTCGGATATGATCATCCAAT+GGG	+	Chr3:98410593-98410612	MsG0380017607.01.T01:CDS	35.0%
!	GTGATTTGTGATTGTTGTGA+AGG	-	Chr3:98410313-98410332	None:intergenic	35.0%
!!	AAACTTGTTGAATCAAGTGG+AGG	+	Chr3:98410565-98410584	MsG0380017607.01.T01:CDS	35.0%
	AGCTTGGTTCAAGTATGACA+TGG	-	Chr3:98410537-98410556	None:intergenic	40.0%
	CTTGGTTCAAGTATGACATG+GGG	-	Chr3:98410535-98410554	None:intergenic	40.0%
	GCTTGGTTCAAGTATGACAT+GGG	-	Chr3:98410536-98410555	None:intergenic	40.0%
	GTCTAATAGCTGCAGGTAAA+CGG	-	Chr3:98410415-98410434	None:intergenic	40.0%
	TACACTGCAAGATAACCCTT+TGG	-	Chr3:98410482-98410501	None:intergenic	40.0%
	ACGTTGGAGAGCAAATGAAG+CGG	+	Chr3:98410501-98410520	MsG0380017607.01.T01:CDS	45.0%
	CTTCTGTGCAAGGAATTGTG+AGG	-	Chr3:98410622-98410641	None:intergenic	45.0%
	GGATATGATCATCCAATGGG+TGG	+	Chr3:98410596-98410615	MsG0380017607.01.T01:CDS	45.0%
	GGTTATCTTGCAGTGTACGT+TGG	+	Chr3:98410485-98410504	MsG0380017607.01.T01:CDS	45.0%
	GAAGCTCGTCTAATAGCTGC+AGG	-	Chr3:98410422-98410441	None:intergenic	50.0%
	GGAATTGTGAGGCCACCCAT+TGG	-	Chr3:98410611-98410630	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	98410230	98410682	98410230	ID=MsG0380017607.01;Name=MsG0380017607.01
Chr3	mRNA	98410230	98410682	98410230	ID=MsG0380017607.01.T01;Parent=MsG0380017607.01;Name=MsG0380017607.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|150
Chr3	exon	98410230	98410682	98410230	ID=MsG0380017607.01.T01:exon:18793;Parent=MsG0380017607.01.T01
Chr3	CDS	98410230	98410682	98410230	ID=MsG0380017607.01.T01:cds;Parent=MsG0380017607.01.T01

Gene Sequence

>MsG0380017607.01.T01

ATGGCCCCCATCCTTTTAGCAATCATTTCTCTAACAAAGGGATTTCAAGAAACTCTTGGAAACTATAAATATTGTGTCCTCCTTCACAACAATCACAAATCACTCAAGAAATCAAACTTGGATACTTTTATCTTACATCTGAAAAATTCATCTTATTTCTTCAAAACATTTGAAATGGGTTTCCGTTTACCTGCAGCTATTAGACGAGCTTCATTTAGCAGTAGCCAAACATCAAAAGTATTGAATGTGCCAAAGGGTTATCTTGCAGTGTACGTTGGAGAGCAAATGAAGCGGTTTGTTATCCCCATGTCATACTTGAACCAAGCTTCATTTCAAAACTTGTTGAATCAAGTGGAGGAAGAATTCGGATATGATCATCCAATGGGTGGCCTCACAATTCCTTGCACAGAAGATGTTTTCTTGCATATTACTGCTCGCTTCAATGAGCTATAA

Protein sequence

>MsG0380017607.01.T01

MAPILLAIISLTKGFQETLGNYKYCVLLHNNHKSLKKSNLDTFILHLKNSSYFFKTFEMGFRLPAAIRRASFSSSQTSKVLNVPKGYLAVYVGEQMKRFVIPMSYLNQASFQNLLNQVEEEFGYDHPMGGLTIPCTEDVFLHITARFNEL*