Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025587.01.T01 | XP_031742992.1 | 84.706 | 85 | 13 | 0 | 1 | 85 | 1 | 85 | 9.62E-45 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025587.01.T01 | Q94JY4 | 93.151 | 73 | 5 | 0 | 1 | 73 | 1 | 73 | 2.15E-44 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025587.01.T01 | A0A444WVS7 | 100.000 | 73 | 0 | 0 | 1 | 73 | 1 | 73 | 3.39e-44 | 148 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047791.01 | MsG0580025587.01 | 0.808374 | 3.196010e-50 | 1.824395e-47 |
| MsG0080047944.01 | MsG0580025587.01 | 0.804145 | 2.486348e-49 | 1.272353e-46 |
| MsG0080048113.01 | MsG0580025587.01 | 0.804352 | 2.251525e-49 | 1.158324e-46 |
| MsG0080048152.01 | MsG0580025587.01 | 0.815364 | 9.601998e-52 | 6.606659e-49 |
| MsG0080048404.01 | MsG0580025587.01 | 0.815913 | 7.246884e-52 | 5.061520e-49 |
| MsG0080048462.01 | MsG0580025587.01 | 0.841938 | 3.508063e-58 | 5.235621e-55 |
| MsG0080048774.01 | MsG0580025587.01 | 0.803589 | 3.242913e-49 | 1.636077e-46 |
| MsG0080048784.01 | MsG0580025587.01 | 0.819916 | 9.031389e-53 | 7.043609e-50 |
| MsG0080048856.01 | MsG0580025587.01 | 0.860817 | 1.585808e-63 | 4.391813e-60 |
| MsG0180000139.01 | MsG0580025587.01 | 0.845978 | 2.897456e-59 | 4.914056e-56 |
| MsG0180000144.01 | MsG0580025587.01 | 0.810605 | 1.060721e-50 | 6.422483e-48 |
| MsG0180000145.01 | MsG0580025587.01 | 0.833658 | 4.699665e-56 | 5.447913e-53 |
| MsG0180000209.01 | MsG0580025587.01 | 0.805582 | 1.245361e-49 | 6.613029e-47 |
| MsG0180000334.01 | MsG0580025587.01 | 0.816930 | 4.290162e-52 | 3.081189e-49 |
| MsG0180000335.01 | MsG0580025587.01 | 0.801983 | 6.961276e-49 | 3.370492e-46 |
| MsG0180000470.01 | MsG0580025587.01 | 0.834035 | 3.782142e-56 | 4.434434e-53 |
| MsG0180000703.01 | MsG0580025587.01 | 0.804579 | 2.018362e-49 | 1.044468e-46 |
| MsG0180000777.01 | MsG0580025587.01 | 0.825428 | 4.712139e-54 | 4.293634e-51 |
| MsG0180000835.01 | MsG0580025587.01 | 0.806520 | 7.903192e-50 | 4.298652e-47 |
| MsG0180000836.01 | MsG0580025587.01 | 0.803063 | 4.168472e-49 | 2.074576e-46 |
| MsG0180000914.01 | MsG0580025587.01 | 0.885166 | 1.027696e-71 | 6.980068e-68 |
| MsG0180000982.01 | MsG0580025587.01 | 0.818901 | 1.538644e-52 | 1.166642e-49 |
| MsG0180001141.01 | MsG0580025587.01 | 0.805124 | 1.553314e-49 | 8.151943e-47 |
| MsG0180001381.01 | MsG0580025587.01 | 0.830895 | 2.269055e-55 | 2.423155e-52 |
| MsG0180001886.01 | MsG0580025587.01 | 0.859524 | 3.896114e-63 | 1.032018e-59 |
| MsG0180001892.01 | MsG0580025587.01 | 0.816756 | 4.693893e-52 | 3.355092e-49 |
| MsG0180002377.01 | MsG0580025587.01 | 0.806113 | 9.632750e-50 | 5.185168e-47 |
| MsG0180002547.01 | MsG0580025587.01 | 0.866129 | 3.572627e-65 | 1.191187e-61 |
| MsG0180002794.01 | MsG0580025587.01 | 0.856524 | 3.036002e-62 | 7.268148e-59 |
| MsG0180002895.01 | MsG0580025587.01 | 0.842014 | 3.348948e-58 | 5.010227e-55 |
| MsG0180003094.01 | MsG0580025587.01 | 0.802350 | 5.849722e-49 | 2.859178e-46 |
| MsG0180003403.01 | MsG0580025587.01 | 0.814446 | 1.534645e-51 | 1.029953e-48 |
| MsG0180003572.01 | MsG0580025587.01 | 0.809853 | 1.541144e-50 | 9.148509e-48 |
| MsG0180003669.01 | MsG0580025587.01 | 0.823683 | 1.214035e-53 | 1.052711e-50 |
| MsG0180003671.01 | MsG0580025587.01 | 0.807166 | 5.771172e-50 | 3.191810e-47 |
| MsG0180003741.01 | MsG0580025587.01 | 0.810512 | 1.110743e-50 | 6.708566e-48 |
| MsG0180003885.01 | MsG0580025587.01 | 0.804311 | 2.295570e-49 | 1.179746e-46 |
| MsG0180003920.01 | MsG0580025587.01 | 0.818864 | 1.569417e-52 | 1.188715e-49 |
| MsG0180003922.01 | MsG0580025587.01 | 0.809928 | 1.484703e-50 | 8.830871e-48 |
| MsG0180003932.01 | MsG0580025587.01 | 0.808475 | 3.041394e-50 | 1.740727e-47 |
| MsG0180003951.01 | MsG0580025587.01 | 0.809659 | 1.696280e-50 | 1.001848e-47 |
| MsG0180004050.01 | MsG0580025587.01 | 0.806603 | 7.592135e-50 | 4.138171e-47 |
| MsG0180004152.01 | MsG0580025587.01 | 0.863004 | 3.390414e-64 | 1.012483e-60 |
| MsG0180004331.01 | MsG0580025587.01 | 0.809184 | 2.144700e-50 | 1.250758e-47 |
| MsG0180004389.01 | MsG0580025587.01 | 0.849885 | 2.425608e-60 | 4.666113e-57 |
| MsG0180004465.01 | MsG0580025587.01 | 0.800604 | 1.333203e-48 | 6.233904e-46 |
| MsG0180004481.01 | MsG0580025587.01 | 0.879797 | 9.292439e-70 | 5.108320e-66 |
| MsG0180004482.01 | MsG0580025587.01 | 0.871471 | 6.665410e-67 | 2.692316e-63 |
| MsG0180004509.01 | MsG0580025587.01 | 0.853197 | 2.802223e-61 | 6.005972e-58 |
| MsG0180004725.01 | MsG0580025587.01 | 0.812070 | 5.101630e-51 | 3.211507e-48 |
| MsG0180004765.01 | MsG0580025587.01 | 0.863254 | 2.838402e-64 | 8.550036e-61 |
| MsG0180004779.01 | MsG0580025587.01 | 0.829281 | 5.618833e-55 | 5.725459e-52 |
| MsG0180004854.01 | MsG0580025587.01 | 0.809705 | 1.657798e-50 | 9.803020e-48 |
| MsG0180004928.01 | MsG0580025587.01 | 0.845039 | 5.205142e-59 | 8.564884e-56 |
| MsG0180005049.01 | MsG0580025587.01 | 0.825205 | 5.321959e-54 | 4.818994e-51 |
| MsG0180005153.01 | MsG0580025587.01 | 0.840002 | 1.129813e-57 | 1.587949e-54 |
| MsG0180005169.01 | MsG0580025587.01 | 0.811455 | 6.943018e-51 | 4.299718e-48 |
| MsG0180005250.01 | MsG0580025587.01 | 0.839155 | 1.876824e-57 | 2.569180e-54 |
| MsG0180005334.01 | MsG0580025587.01 | 0.800500 | 1.399952e-48 | 6.528759e-46 |
| MsG0180005445.01 | MsG0580025587.01 | 0.807868 | 4.096952e-50 | 2.307512e-47 |
| MsG0180005575.01 | MsG0580025587.01 | 0.834860 | 2.347336e-56 | 2.821071e-53 |
| MsG0180005799.01 | MsG0580025587.01 | 0.810260 | 1.259336e-50 | 7.555539e-48 |
| MsG0180005990.01 | MsG0580025587.01 | 0.818800 | 1.622379e-52 | 1.226571e-49 |
| MsG0180005993.01 | MsG0580025587.01 | 0.847249 | 1.303301e-59 | 2.302618e-56 |
| MsG0180006013.01 | MsG0580025587.01 | 0.822887 | 1.861989e-53 | 1.578518e-50 |
| MsG0180006017.01 | MsG0580025587.01 | 0.823715 | 1.192751e-53 | 1.035248e-50 |
| MsG0180006024.01 | MsG0580025587.01 | 0.846359 | 2.282690e-59 | 3.918845e-56 |
| MsG0180006049.01 | MsG0580025587.01 | 0.808774 | 2.625822e-50 | 1.514523e-47 |
| MsG0180006096.01 | MsG0580025587.01 | 0.807665 | 4.522900e-50 | 2.534057e-47 |
| MsG0180006155.01 | MsG0580025587.01 | 0.819805 | 9.578102e-53 | 7.446857e-50 |
| MsG0180006224.01 | MsG0580025587.01 | 0.821211 | 4.554033e-53 | 3.681906e-50 |
| MsG0180006261.01 | MsG0580025587.01 | 0.800506 | 1.395814e-48 | 6.510427e-46 |
| MsG0280006299.01 | MsG0580025587.01 | 0.810406 | 1.171388e-50 | 7.054625e-48 |
| MsG0280006306.01 | MsG0580025587.01 | -0.819462 | 1.146765e-52 | 8.831071e-50 |
| MsG0280006324.01 | MsG0580025587.01 | 0.828492 | 8.722565e-55 | 8.683982e-52 |
| MsG0280006405.01 | MsG0580025587.01 | 0.845456 | 4.015773e-59 | 6.695967e-56 |
| MsG0280006422.01 | MsG0580025587.01 | 0.839606 | 1.433074e-57 | 1.989209e-54 |
| MsG0280010698.01 | MsG0580025587.01 | 0.808019 | 3.803624e-50 | 2.150947e-47 |
| MsG0280010722.01 | MsG0580025587.01 | 0.833711 | 4.558573e-56 | 5.292425e-53 |
| MsG0280010753.01 | MsG0580025587.01 | 0.805635 | 1.213653e-49 | 6.453570e-47 |
| MsG0280010776.01 | MsG0580025587.01 | 0.837275 | 5.720752e-57 | 7.393323e-54 |
| MsG0280010778.01 | MsG0580025587.01 | 0.864391 | 1.257581e-64 | 3.942114e-61 |
| MsG0280010980.01 | MsG0580025587.01 | 0.838610 | 2.596498e-57 | 3.496232e-54 |
| MsG0280011003.01 | MsG0580025587.01 | 0.808068 | 3.714138e-50 | 2.103046e-47 |
| MsG0280011013.01 | MsG0580025587.01 | 0.812255 | 4.647876e-51 | 2.940783e-48 |
| MsG0280011014.01 | MsG0580025587.01 | 0.835489 | 1.629306e-56 | 1.995448e-53 |
| MsG0280011101.01 | MsG0580025587.01 | 0.815126 | 1.084548e-51 | 7.413418e-49 |
| MsG0280011109.01 | MsG0580025587.01 | 0.826558 | 2.540502e-54 | 2.390573e-51 |
| MsG0280011141.01 | MsG0580025587.01 | 0.804735 | 1.872786e-49 | 9.731271e-47 |
| MsG0280011156.01 | MsG0580025587.01 | 0.831340 | 1.764561e-55 | 1.909256e-52 |
| MsG0280011319.01 | MsG0580025587.01 | 0.802051 | 6.740263e-49 | 3.269326e-46 |
| MsG0280011329.01 | MsG0580025587.01 | 0.823262 | 1.522337e-53 | 1.304260e-50 |
| MsG0280011339.01 | MsG0580025587.01 | 0.822633 | 2.133477e-53 | 1.795868e-50 |
| MsG0280011371.01 | MsG0580025587.01 | 0.802049 | 6.745239e-49 | 3.271598e-46 |
| MsG0280011388.01 | MsG0580025587.01 | 0.844381 | 7.830772e-59 | 1.261872e-55 |
| MsG0380011496.01 | MsG0580025587.01 | 0.800750 | 1.244726e-48 | 5.841757e-46 |
| MsG0380011501.01 | MsG0580025587.01 | 0.821318 | 4.304527e-53 | 3.490219e-50 |
| MsG0380011581.01 | MsG0580025587.01 | 0.842135 | 3.109861e-58 | 4.670525e-55 |
| MsG0380011609.01 | MsG0580025587.01 | 0.809926 | 1.486349e-50 | 8.840197e-48 |
| MsG0380011755.01 | MsG0580025587.01 | 0.801557 | 8.511971e-49 | 4.077188e-46 |
| MsG0380012067.01 | MsG0580025587.01 | 0.809453 | 1.878331e-50 | 1.103229e-47 |
| MsG0380012460.01 | MsG0580025587.01 | 0.818439 | 1.959148e-52 | 1.466684e-49 |
| MsG0380012471.01 | MsG0580025587.01 | 0.802332 | 5.900171e-49 | 2.882497e-46 |
| MsG0380013085.01 | MsG0580025587.01 | 0.803562 | 3.285826e-49 | 1.656578e-46 |
| MsG0380013178.01 | MsG0580025587.01 | 0.807913 | 4.006326e-50 | 2.259129e-47 |
| MsG0380013183.01 | MsG0580025587.01 | 0.849152 | 3.883777e-60 | 7.296463e-57 |
| MsG0380013475.01 | MsG0580025587.01 | 0.816258 | 6.066728e-52 | 4.277888e-49 |
| MsG0380013549.01 | MsG0580025587.01 | 0.805043 | 1.615295e-49 | 8.459401e-47 |
| MsG0380014097.01 | MsG0580025587.01 | 0.802005 | 6.887045e-49 | 3.336568e-46 |
| MsG0380014173.01 | MsG0580025587.01 | 0.818965 | 1.488386e-52 | 1.130559e-49 |
| MsG0380014225.01 | MsG0580025587.01 | -0.855162 | 7.588609e-62 | 1.735844e-58 |
| MsG0380014248.01 | MsG0580025587.01 | 0.842761 | 2.123046e-58 | 3.251309e-55 |
| MsG0380014296.01 | MsG0580025587.01 | 0.803129 | 4.039032e-49 | 2.013607e-46 |
| MsG0380014537.01 | MsG0580025587.01 | 0.833693 | 4.605272e-56 | 5.343758e-53 |
| MsG0380014681.01 | MsG0580025587.01 | 0.802427 | 5.640011e-49 | 2.762115e-46 |
| MsG0380014701.01 | MsG0580025587.01 | 0.829094 | 6.238432e-55 | 6.320607e-52 |
| MsG0380014703.01 | MsG0580025587.01 | 0.808549 | 2.932518e-50 | 1.681641e-47 |
| MsG0380014876.01 | MsG0580025587.01 | 0.813007 | 3.182007e-51 | 2.053831e-48 |
| MsG0480018477.01 | MsG0580025587.01 | 0.811699 | 6.142512e-51 | 3.828388e-48 |
| MsG0480018894.01 | MsG0580025587.01 | 0.824209 | 9.136713e-54 | 8.040154e-51 |
| MsG0480018985.01 | MsG0580025587.01 | 0.803985 | 2.683704e-49 | 1.367787e-46 |
| MsG0480019206.01 | MsG0580025587.01 | 0.822570 | 2.207592e-53 | 1.854878e-50 |
| MsG0480019416.01 | MsG0580025587.01 | 0.801729 | 7.846764e-49 | 3.774905e-46 |
| MsG0480020447.01 | MsG0580025587.01 | 0.864470 | 1.187844e-64 | 3.733754e-61 |
| MsG0480020739.01 | MsG0580025587.01 | 0.835968 | 1.232228e-56 | 1.530959e-53 |
| MsG0480020780.01 | MsG0580025587.01 | 0.809048 | 2.293508e-50 | 1.332629e-47 |
| MsG0480020879.01 | MsG0580025587.01 | 0.839518 | 1.510878e-57 | 2.091561e-54 |
| MsG0480020907.01 | MsG0580025587.01 | 0.805454 | 1.324813e-49 | 7.011894e-47 |
| MsG0480021056.01 | MsG0580025587.01 | 0.837641 | 4.610414e-57 | 6.027172e-54 |
| MsG0480021195.01 | MsG0580025587.01 | 0.822455 | 2.347925e-53 | 1.966212e-50 |
| MsG0480021215.01 | MsG0580025587.01 | 0.838950 | 2.120133e-57 | 2.884299e-54 |
| MsG0480021280.01 | MsG0580025587.01 | 0.803868 | 2.838628e-49 | 1.442417e-46 |
| MsG0480021448.01 | MsG0580025587.01 | 0.815754 | 7.860728e-52 | 5.467141e-49 |
| MsG0480021451.01 | MsG0580025587.01 | 0.819515 | 1.115232e-52 | 8.600674e-50 |
| MsG0480021452.01 | MsG0580025587.01 | 0.856800 | 2.518683e-62 | 6.082427e-59 |
| MsG0480021453.01 | MsG0580025587.01 | 0.824850 | 6.455321e-54 | 5.786431e-51 |
| MsG0480021465.01 | MsG0580025587.01 | 0.857973 | 1.132678e-62 | 2.846350e-59 |
| MsG0480021706.01 | MsG0580025587.01 | 0.804937 | 1.699478e-49 | 8.876804e-47 |
| MsG0480021750.01 | MsG0580025587.01 | 0.843342 | 1.486171e-58 | 2.318477e-55 |
| MsG0480021994.01 | MsG0580025587.01 | 0.826500 | 2.621839e-54 | 2.463081e-51 |
| MsG0480022054.01 | MsG0580025587.01 | 0.848364 | 6.423785e-60 | 1.176054e-56 |
| MsG0480022164.01 | MsG0580025587.01 | 0.836317 | 1.004213e-56 | 1.261161e-53 |
| MsG0480022223.01 | MsG0580025587.01 | 0.836880 | 7.219013e-57 | 9.219735e-54 |
| MsG0480022292.01 | MsG0580025587.01 | 0.809244 | 2.082845e-50 | 1.216622e-47 |
| MsG0480022514.01 | MsG0580025587.01 | 0.807222 | 5.617022e-50 | 3.111104e-47 |
| MsG0480022696.01 | MsG0580025587.01 | 0.865848 | 4.385163e-65 | 1.447549e-61 |
| MsG0480022711.01 | MsG0580025587.01 | 0.856496 | 3.092866e-62 | 7.397454e-59 |
| MsG0480022795.01 | MsG0580025587.01 | 0.817852 | 2.660174e-52 | 1.959417e-49 |
| MsG0480022960.01 | MsG0580025587.01 | 0.813936 | 1.988333e-51 | 1.316070e-48 |
| MsG0480022985.01 | MsG0580025587.01 | 0.836180 | 1.088111e-56 | 1.360904e-53 |
| MsG0480023055.01 | MsG0580025587.01 | 0.831514 | 1.598925e-55 | 1.739086e-52 |
| MsG0480023163.01 | MsG0580025587.01 | 0.803598 | 3.229547e-49 | 1.629682e-46 |
| MsG0480023221.01 | MsG0580025587.01 | 0.862555 | 4.663115e-64 | 1.371148e-60 |
| MsG0480023272.01 | MsG0580025587.01 | 0.809702 | 1.660626e-50 | 9.818759e-48 |
| MsG0480023356.01 | MsG0580025587.01 | 0.820278 | 7.462031e-53 | 5.878270e-50 |
| MsG0480023357.01 | MsG0580025587.01 | 0.836486 | 9.100566e-57 | 1.148469e-53 |
| MsG0480023463.01 | MsG0580025587.01 | 0.812782 | 3.564306e-51 | 2.286767e-48 |
| MsG0480023600.01 | MsG0580025587.01 | 0.835143 | 1.992100e-56 | 2.414432e-53 |
| MsG0480023636.01 | MsG0580025587.01 | 0.837030 | 6.609035e-57 | 8.478693e-54 |
| MsG0480023814.01 | MsG0580025587.01 | 0.808899 | 2.468135e-50 | 1.428322e-47 |
| MsG0480023943.01 | MsG0580025587.01 | 0.816284 | 5.985460e-52 | 4.223649e-49 |
| MsG0480023994.01 | MsG0580025587.01 | 0.806070 | 9.833359e-50 | 5.287414e-47 |
| MsG0580024185.01 | MsG0580025587.01 | 0.817395 | 3.371983e-52 | 2.452807e-49 |
| MsG0580024197.01 | MsG0580025587.01 | 0.894853 | 1.667626e-75 | 1.687277e-71 |
| MsG0580024339.01 | MsG0580025587.01 | 0.816941 | 4.264465e-52 | 3.063924e-49 |
| MsG0580024390.01 | MsG0580025587.01 | 0.820041 | 8.458587e-53 | 6.620057e-50 |
| MsG0580024619.01 | MsG0580025587.01 | 0.828640 | 8.032626e-55 | 8.031238e-52 |
| MsG0580024781.01 | MsG0580025587.01 | 0.816645 | 4.970201e-52 | 3.541747e-49 |
| MsG0580025135.01 | MsG0580025587.01 | 0.804649 | 1.951966e-49 | 1.011939e-46 |
| MsG0580025268.01 | MsG0580025587.01 | 0.813222 | 2.854342e-51 | 1.852967e-48 |
| MsG0580025332.01 | MsG0580025587.01 | 0.820926 | 5.298180e-53 | 4.249533e-50 |
| MsG0580025357.01 | MsG0580025587.01 | -0.814479 | 1.508513e-51 | 1.013373e-48 |
| MsG0580025587.01 | MsG0580025651.01 | 0.804990 | 1.656673e-49 | 8.664465e-47 |
| MsG0580025587.01 | MsG0580025661.01 | 0.814016 | 1.909684e-51 | 1.266797e-48 |
| MsG0580025587.01 | MsG0580025756.01 | 0.838000 | 3.729050e-57 | 4.928709e-54 |
| MsG0580025587.01 | MsG0580025899.01 | 0.804025 | 2.633251e-49 | 1.343420e-46 |
| MsG0580025587.01 | MsG0580025986.01 | 0.800080 | 1.704610e-48 | 7.865270e-46 |
| MsG0580025587.01 | MsG0580025987.01 | 0.800751 | 1.244137e-48 | 5.839124e-46 |
| MsG0580025587.01 | MsG0580026086.01 | 0.846759 | 1.775174e-59 | 3.087415e-56 |
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| MsG0580025587.01 | MsG0580026485.01 | 0.814178 | 1.758545e-51 | 1.171670e-48 |
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| MsG0280008457.01 | MsG0580025587.01 | 0.831882 | 1.297235e-55 | 1.426572e-52 |
| MsG0280008615.01 | MsG0580025587.01 | 0.830586 | 2.701158e-55 | 2.858123e-52 |
| MsG0280008866.01 | MsG0580025587.01 | 0.817626 | 2.990624e-52 | 2.189165e-49 |
| MsG0280009421.01 | MsG0580025587.01 | 0.808197 | 3.486481e-50 | 1.980961e-47 |
| MsG0280009575.01 | MsG0580025587.01 | 0.803551 | 3.303690e-49 | 1.665078e-46 |
| MsG0280009578.01 | MsG0580025587.01 | 0.814502 | 1.490865e-51 | 1.002171e-48 |
| MsG0280009794.01 | MsG0580025587.01 | 0.805342 | 1.397955e-49 | 7.377680e-47 |
| MsG0280010013.01 | MsG0580025587.01 | 0.801237 | 9.900518e-49 | 4.704293e-46 |
| MsG0280010148.01 | MsG0580025587.01 | 0.812437 | 4.240766e-51 | 2.696510e-48 |
| MsG0280010182.01 | MsG0580025587.01 | 0.800005 | 1.765508e-48 | 8.130717e-46 |
| MsG0280010184.01 | MsG0580025587.01 | 0.816674 | 4.896700e-52 | 3.492144e-49 |
| MsG0280010233.01 | MsG0580025587.01 | 0.866537 | 2.652901e-65 | 8.972401e-62 |
| MsG0280010349.01 | MsG0580025587.01 | 0.803308 | 3.708471e-49 | 1.857332e-46 |
| MsG0280010366.01 | MsG0580025587.01 | 0.812329 | 4.479085e-51 | 2.839642e-48 |
| MsG0280010434.01 | MsG0580025587.01 | 0.833518 | 5.093667e-56 | 5.880321e-53 |
| MsG0280010489.01 | MsG0580025587.01 | 0.813564 | 2.401327e-51 | 1.573543e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025587.01.T01 | MTR_5g030935 | 100.000 | 73 | 0 | 0 | 1 | 73 | 1 | 73 | 1.18e-47 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025587.01.T01 | AT2G22640 | 93.151 | 73 | 5 | 0 | 1 | 73 | 1 | 73 | 2.19e-45 | 142 |
Find 26 sgRNAs with CRISPR-Local
Find 37 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTTGATTGCCAATTTAT+TGG | 0.221769 | 5:-20895581 | MsG0580025587.01.T01:three_prime_UTR |
| CATTGGTTTATTTGCAAATT+CGG | 0.278022 | 5:-20895539 | MsG0580025587.01.T01:three_prime_UTR |
| CAATTTATTGGGTTATTAGA+TGG | 0.289266 | 5:-20895569 | MsG0580025587.01.T01:three_prime_UTR |
| TTCTTGATTGCCAATTTATT+GGG | 0.290000 | 5:-20895580 | MsG0580025587.01.T01:three_prime_UTR |
| CATCTAATAACCCAATAAAT+TGG | 0.317606 | 5:+20895570 | None:intergenic |
| CCATCTAGATTATACATTAT+AGG | 0.320418 | 5:+20895689 | None:intergenic |
| CCTCCAGCACGTGCCATTGA+TGG | 0.347571 | 5:+20896103 | None:intergenic |
| GAAGAAATTCAGTACCGAAT+TGG | 0.368507 | 5:+20895972 | None:intergenic |
| TTGATGTTTAAGGGTATGTT+TGG | 0.379817 | 5:+20896267 | None:intergenic |
| GAATCGCTGTTCAAGCTGAT+TGG | 0.386107 | 5:-20896057 | MsG0580025587.01.T01:CDS |
| CCTATAATGTATAATCTAGA+TGG | 0.388438 | 5:-20895689 | MsG0580025587.01.T01:CDS |
| TGATGTATTGGAGCGTCGTT+TGG | 0.391324 | 5:-20895819 | MsG0580025587.01.T01:CDS |
| TTCGATTTCCTTGTCCAATT+CGG | 0.396293 | 5:-20895986 | MsG0580025587.01.T01:intron |
| TGAAGTAAAGGAGAGTTAGT+TGG | 0.400349 | 5:-20896196 | MsG0580025587.01.T01:five_prime_UTR |
| AAGTTCAAGTTGAAATGCTT+CGG | 0.412595 | 5:-20895787 | MsG0580025587.01.T01:CDS |
| GAATGAAAAGCTTGATGTAT+TGG | 0.415813 | 5:-20895831 | MsG0580025587.01.T01:CDS |
| TATTAGATGGTTTAATGCAT+TGG | 0.431631 | 5:-20895556 | MsG0580025587.01.T01:three_prime_UTR |
| AATCGCTGTTCAAGCTGATT+GGG | 0.456401 | 5:-20896056 | MsG0580025587.01.T01:CDS |
| ATTCCATCAATGGCACGTGC+TGG | 0.500686 | 5:-20896106 | MsG0580025587.01.T01:exon |
| AATAAAATCAAAATCTACAT+TGG | 0.509747 | 5:-20896144 | MsG0580025587.01.T01:five_prime_UTR |
| AAATCAAAGAATTCCATCAA+TGG | 0.510384 | 5:-20896116 | MsG0580025587.01.T01:exon |
| AGATTATACATTATAGGTGG+TGG | 0.524893 | 5:+20895695 | None:intergenic |
| CCATCAATGGCACGTGCTGG+AGG | 0.587599 | 5:-20896103 | MsG0580025587.01.T01:exon |
| ATTCAGTACCGAATTGGACA+AGG | 0.614288 | 5:+20895978 | None:intergenic |
| ATCACAAACGCAGTTAACGT+TGG | 0.624596 | 5:-20896079 | MsG0580025587.01.T01:CDS |
| TCTAGATTATACATTATAGG+TGG | 0.659426 | 5:+20895692 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATATCTTTTTTTGAT+GGG | - | Chr5:20895892-20895911 | MsG0580025587.01.T01:intron | 10.0% |
| !! | AATAAAATCAAAATCTACAT+TGG | - | Chr5:20895657-20895676 | MsG0580025587.01.T01:exon | 15.0% |
| !!! | GAAATTATATCTTTTTTTGA+TGG | - | Chr5:20895891-20895910 | MsG0580025587.01.T01:intron | 15.0% |
| !! | AGATATAATTTCAACTAACA+AGG | + | Chr5:20895883-20895902 | None:intergenic | 20.0% |
| !!! | TGTTATTTTTGTTATTTCAG+AGG | - | Chr5:20895919-20895938 | MsG0580025587.01.T01:intron | 20.0% |
| ! | AAATCAAAGAATTCCATCAA+TGG | - | Chr5:20895685-20895704 | MsG0580025587.01.T01:CDS | 25.0% |
| ! | AACAAAAAGTCTTGAAGTAA+AGG | - | Chr5:20895593-20895612 | MsG0580025587.01.T01:three_prime_UTR | 25.0% |
| ! | CAATTTATTGGGTTATTAGA+TGG | - | Chr5:20896232-20896251 | MsG0580025587.01.T01:five_prime_UTR | 25.0% |
| ! | CATCTAATAACCCAATAAAT+TGG | + | Chr5:20896234-20896253 | None:intergenic | 25.0% |
| ! | CCATCTAGATTATACATTAT+AGG | + | Chr5:20896115-20896134 | None:intergenic | 25.0% |
| ! | CCTATAATGTATAATCTAGA+TGG | - | Chr5:20896112-20896131 | MsG0580025587.01.T01:exon | 25.0% |
| ! | TATTAGATGGTTTAATGCAT+TGG | - | Chr5:20896245-20896264 | MsG0580025587.01.T01:five_prime_UTR | 25.0% |
| ! | TCTAGATTATACATTATAGG+TGG | + | Chr5:20896112-20896131 | None:intergenic | 25.0% |
| ! | TTCTTGATTGCCAATTTATT+GGG | - | Chr5:20896221-20896240 | MsG0580025587.01.T01:five_prime_UTR | 25.0% |
| !! | ACTCAAACTTTTGATGTTTA+AGG | + | Chr5:20895547-20895566 | None:intergenic | 25.0% |
| !! | CTCAAACTTTTGATGTTTAA+GGG | + | Chr5:20895546-20895565 | None:intergenic | 25.0% |
| !!! | CATTGGTTTATTTGCAAATT+CGG | - | Chr5:20896262-20896281 | MsG0580025587.01.T01:five_prime_UTR | 25.0% |
| AGATTATACATTATAGGTGG+TGG | + | Chr5:20896109-20896128 | None:intergenic | 30.0% | |
| ATTTCAACTAACAAGGCAAA+AGG | + | Chr5:20895876-20895895 | None:intergenic | 30.0% | |
| GAATGAAAAGCTTGATGTAT+TGG | - | Chr5:20895970-20895989 | MsG0580025587.01.T01:intron | 30.0% | |
| GGGTATGTTTGGTAAAAAAA+TGG | + | Chr5:20895526-20895545 | None:intergenic | 30.0% | |
| GTTCTTGATTGCCAATTTAT+TGG | - | Chr5:20896220-20896239 | MsG0580025587.01.T01:five_prime_UTR | 30.0% | |
| TTTCAACTAACAAGGCAAAA+GGG | + | Chr5:20895875-20895894 | None:intergenic | 30.0% | |
| ! | TTGATGTTTAAGGGTATGTT+TGG | + | Chr5:20895537-20895556 | None:intergenic | 30.0% |
| !! | AAGTTCAAGTTGAAATGCTT+CGG | - | Chr5:20896014-20896033 | MsG0580025587.01.T01:CDS | 30.0% |
| TGAAGTAAAGGAGAGTTAGT+TGG | - | Chr5:20895605-20895624 | MsG0580025587.01.T01:three_prime_UTR | 35.0% | |
| TTCGATTTCCTTGTCCAATT+CGG | - | Chr5:20895815-20895834 | MsG0580025587.01.T01:CDS | 35.0% | |
| ! | CATCAAGTTGCAAAAAGAGA+AGG | + | Chr5:20896044-20896063 | None:intergenic | 35.0% |
| ! | GAAGAAATTCAGTACCGAAT+TGG | + | Chr5:20895832-20895851 | None:intergenic | 35.0% |
| AATCGCTGTTCAAGCTGATT+GGG | - | Chr5:20895745-20895764 | MsG0580025587.01.T01:CDS | 40.0% | |
| ATCACAAACGCAGTTAACGT+TGG | - | Chr5:20895722-20895741 | MsG0580025587.01.T01:CDS | 40.0% | |
| ! | ATTCAGTACCGAATTGGACA+AGG | + | Chr5:20895826-20895845 | None:intergenic | 40.0% |
| GAATCGCTGTTCAAGCTGAT+TGG | - | Chr5:20895744-20895763 | MsG0580025587.01.T01:CDS | 45.0% | |
| !! | TGATGTATTGGAGCGTCGTT+TGG | - | Chr5:20895982-20896001 | MsG0580025587.01.T01:intron | 45.0% |
| ATTCCATCAATGGCACGTGC+TGG | - | Chr5:20895695-20895714 | MsG0580025587.01.T01:CDS | 50.0% | |
| CCATCAATGGCACGTGCTGG+AGG | - | Chr5:20895698-20895717 | MsG0580025587.01.T01:CDS | 60.0% | |
| ! | CCTCCAGCACGTGCCATTGA+TGG | + | Chr5:20895701-20895720 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 20895517 | 20896306 | 20895517 | ID=MsG0580025587.01;Name=MsG0580025587.01 |
| Chr5 | mRNA | 20895517 | 20896306 | 20895517 | ID=MsG0580025587.01.T01;Parent=MsG0580025587.01;Name=MsG0580025587.01.T01;_AED=0.13;_eAED=0.13;_QI=187|1|1|1|1|1|2|156|114 |
| Chr5 | exon | 20895517 | 20895884 | 20895517 | ID=MsG0580025587.01.T01:exon:23404;Parent=MsG0580025587.01.T01 |
| Chr5 | exon | 20895987 | 20896306 | 20895987 | ID=MsG0580025587.01.T01:exon:23403;Parent=MsG0580025587.01.T01 |
| Chr5 | five_prime_UTR | 20896120 | 20896306 | 20896120 | ID=MsG0580025587.01.T01:five_prime_utr;Parent=MsG0580025587.01.T01 |
| Chr5 | CDS | 20895987 | 20896119 | 20895987 | ID=MsG0580025587.01.T01:cds;Parent=MsG0580025587.01.T01 |
| Chr5 | CDS | 20895673 | 20895884 | 20895673 | ID=MsG0580025587.01.T01:cds;Parent=MsG0580025587.01.T01 |
| Chr5 | three_prime_UTR | 20895517 | 20895672 | 20895517 | ID=MsG0580025587.01.T01:three_prime_utr;Parent=MsG0580025587.01.T01 |
| Gene Sequence |
| Protein sequence |
