Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022476.01.T01 | XP_024638347.1 | 95.604 | 273 | 12 | 0 | 2 | 274 | 112 | 384 | 2.95E-177 | 511 |
| MsG0480022476.01.T01 | XP_024638347.1 | 83.333 | 90 | 15 | 0 | 89 | 178 | 108 | 197 | 2.81E-39 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022476.01.T01 | G7JQR8 | 95.604 | 273 | 12 | 0 | 2 | 274 | 112 | 384 | 1.59e-177 | 510 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048964.01 | MsG0480022476.01 | 0.802544 | 5.335859e-49 | 2.620784e-46 |
| MsG0180000475.01 | MsG0480022476.01 | 0.817570 | 3.079037e-52 | 2.250390e-49 |
| MsG0180000703.01 | MsG0480022476.01 | 0.829779 | 4.252497e-55 | 4.396482e-52 |
| MsG0180000777.01 | MsG0480022476.01 | 0.806726 | 7.150601e-50 | 3.909888e-47 |
| MsG0180001020.01 | MsG0480022476.01 | 0.813501 | 2.479387e-51 | 1.621966e-48 |
| MsG0180001312.01 | MsG0480022476.01 | 0.801057 | 1.077249e-48 | 5.095691e-46 |
| MsG0180002955.01 | MsG0480022476.01 | 0.823261 | 1.523118e-53 | 1.304899e-50 |
| MsG0180003031.01 | MsG0480022476.01 | 0.801782 | 7.655309e-49 | 3.687722e-46 |
| MsG0180003510.01 | MsG0480022476.01 | 0.802754 | 4.828510e-49 | 2.384421e-46 |
| MsG0180003673.01 | MsG0480022476.01 | 0.803394 | 3.560391e-49 | 1.787126e-46 |
| MsG0180003725.01 | MsG0480022476.01 | 0.825841 | 3.761760e-54 | 3.468597e-51 |
| MsG0180003807.01 | MsG0480022476.01 | 0.826435 | 2.716500e-54 | 2.547440e-51 |
| MsG0180003810.01 | MsG0480022476.01 | 0.832650 | 8.376936e-56 | 9.422480e-53 |
| MsG0180003977.01 | MsG0480022476.01 | 0.820681 | 6.031986e-53 | 4.804784e-50 |
| MsG0180004005.01 | MsG0480022476.01 | 0.827729 | 1.332036e-54 | 1.296846e-51 |
| MsG0180004180.01 | MsG0480022476.01 | 0.856848 | 2.438001e-62 | 5.897095e-59 |
| MsG0180004294.01 | MsG0480022476.01 | 0.813289 | 2.760039e-51 | 1.795088e-48 |
| MsG0180004295.01 | MsG0480022476.01 | 0.846943 | 1.580689e-59 | 2.765236e-56 |
| MsG0180004331.01 | MsG0480022476.01 | 0.842654 | 2.266760e-58 | 3.459777e-55 |
| MsG0180004372.01 | MsG0480022476.01 | 0.821196 | 4.591009e-53 | 3.710253e-50 |
| MsG0180004449.01 | MsG0480022476.01 | 0.813468 | 2.520743e-51 | 1.647584e-48 |
| MsG0180004465.01 | MsG0480022476.01 | 0.809823 | 1.563791e-50 | 9.275826e-48 |
| MsG0180004651.01 | MsG0480022476.01 | 0.809347 | 1.978996e-50 | 1.159162e-47 |
| MsG0180005050.01 | MsG0480022476.01 | 0.800270 | 1.559110e-48 | 7.228799e-46 |
| MsG0180005185.01 | MsG0480022476.01 | 0.832341 | 9.990074e-56 | 1.113281e-52 |
| MsG0180005228.01 | MsG0480022476.01 | 0.817089 | 3.950912e-52 | 2.849857e-49 |
| MsG0180005445.01 | MsG0480022476.01 | 0.826286 | 2.948265e-54 | 2.753028e-51 |
| MsG0180005507.01 | MsG0480022476.01 | 0.800808 | 1.211302e-48 | 5.693190e-46 |
| MsG0180005786.01 | MsG0480022476.01 | 0.822262 | 2.602994e-53 | 2.167796e-50 |
| MsG0180005842.01 | MsG0480022476.01 | 0.836085 | 1.150204e-56 | 1.434274e-53 |
| MsG0180005878.01 | MsG0480022476.01 | 0.818098 | 2.340010e-52 | 1.735160e-49 |
| MsG0180005944.01 | MsG0480022476.01 | 0.806899 | 6.574719e-50 | 3.611024e-47 |
| MsG0180006098.01 | MsG0480022476.01 | 0.808910 | 2.455112e-50 | 1.421209e-47 |
| MsG0180006128.01 | MsG0480022476.01 | 0.804654 | 1.946891e-49 | 1.009432e-46 |
| MsG0180006155.01 | MsG0480022476.01 | 0.824093 | 9.728740e-54 | 8.532754e-51 |
| MsG0280006365.01 | MsG0480022476.01 | 0.833966 | 3.936387e-56 | 4.606033e-53 |
| MsG0280010560.01 | MsG0480022476.01 | 0.864702 | 1.005717e-64 | 3.187049e-61 |
| MsG0280010599.01 | MsG0480022476.01 | 0.803193 | 3.918561e-49 | 1.956835e-46 |
| MsG0280010722.01 | MsG0480022476.01 | 0.845820 | 3.199665e-59 | 5.398990e-56 |
| MsG0280010816.01 | MsG0480022476.01 | 0.824156 | 9.403089e-54 | 8.262155e-51 |
| MsG0280010900.01 | MsG0480022476.01 | 0.811704 | 6.129392e-51 | 3.820687e-48 |
| MsG0280010976.01 | MsG0480022476.01 | 0.845383 | 4.203424e-59 | 6.992567e-56 |
| MsG0280011052.01 | MsG0480022476.01 | 0.817422 | 3.324248e-52 | 2.419967e-49 |
| MsG0280011334.01 | MsG0480022476.01 | 0.835965 | 1.233762e-56 | 1.532742e-53 |
| MsG0380012020.01 | MsG0480022476.01 | 0.824557 | 7.568641e-54 | 6.727311e-51 |
| MsG0380012460.01 | MsG0480022476.01 | 0.815029 | 1.139877e-51 | 7.771432e-49 |
| MsG0380013363.01 | MsG0480022476.01 | 0.800388 | 1.475201e-48 | 6.860326e-46 |
| MsG0380014248.01 | MsG0480022476.01 | 0.814133 | 1.799092e-51 | 1.197234e-48 |
| MsG0380014537.01 | MsG0480022476.01 | 0.830957 | 2.191971e-55 | 2.344888e-52 |
| MsG0380014701.01 | MsG0480022476.01 | 0.805311 | 1.419503e-49 | 7.485383e-47 |
| MsG0380014866.01 | MsG0480022476.01 | 0.818031 | 2.423078e-52 | 1.793452e-49 |
| MsG0480019772.01 | MsG0480022476.01 | 0.819598 | 1.067831e-52 | 8.253960e-50 |
| MsG0480019785.01 | MsG0480022476.01 | 0.818817 | 1.608339e-52 | 1.216518e-49 |
| MsG0480019816.01 | MsG0480022476.01 | 0.809864 | 1.532879e-50 | 9.101989e-48 |
| MsG0480019970.01 | MsG0480022476.01 | 0.817340 | 3.469990e-52 | 2.520221e-49 |
| MsG0480020447.01 | MsG0480022476.01 | 0.820749 | 5.819446e-53 | 4.644464e-50 |
| MsG0480020916.01 | MsG0480022476.01 | 0.831058 | 2.070207e-55 | 2.221358e-52 |
| MsG0480021998.01 | MsG0480022476.01 | 0.821004 | 5.083131e-53 | 4.086337e-50 |
| MsG0480022292.01 | MsG0480022476.01 | 0.804056 | 2.594056e-49 | 1.324514e-46 |
| MsG0480022318.01 | MsG0480022476.01 | 0.800274 | 1.556351e-48 | 7.216656e-46 |
| MsG0480022467.01 | MsG0480022476.01 | 0.862354 | 5.378387e-64 | 1.570412e-60 |
| MsG0480022476.01 | MsG0480022551.01 | 0.822924 | 1.825660e-53 | 1.549341e-50 |
| MsG0480022476.01 | MsG0480022985.01 | 0.821264 | 4.427996e-53 | 3.584837e-50 |
| MsG0480022476.01 | MsG0480023014.01 | 0.823985 | 1.031513e-53 | 9.019701e-51 |
| MsG0480022476.01 | MsG0480023025.01 | 0.824813 | 6.584929e-54 | 5.896476e-51 |
| MsG0480022476.01 | MsG0480023224.01 | 0.815622 | 8.413378e-52 | 5.830471e-49 |
| MsG0480022476.01 | MsG0480023412.01 | 0.807835 | 4.163610e-50 | 2.343086e-47 |
| MsG0480022476.01 | MsG0480023554.01 | 0.818333 | 2.070043e-52 | 1.545067e-49 |
| MsG0480022476.01 | MsG0480023600.01 | 0.824020 | 1.012048e-53 | 8.857787e-51 |
| MsG0480022476.01 | MsG0480023659.01 | 0.818043 | 2.408753e-52 | 1.783407e-49 |
| MsG0480022476.01 | MsG0480023670.01 | 0.832834 | 7.541070e-56 | 8.528444e-53 |
| MsG0480022476.01 | MsG0480023729.01 | 0.811689 | 6.175966e-51 | 3.848113e-48 |
| MsG0480022476.01 | MsG0480023873.01 | 0.822398 | 2.420442e-53 | 2.023721e-50 |
| MsG0480022476.01 | MsG0480024014.01 | 0.800068 | 1.714434e-48 | 7.908173e-46 |
| MsG0480022476.01 | MsG0580024160.01 | 0.801686 | 8.009518e-49 | 3.848950e-46 |
| MsG0480022476.01 | MsG0580024251.01 | 0.824776 | 6.721412e-54 | 6.012299e-51 |
| MsG0480022476.01 | MsG0580024353.01 | 0.800081 | 1.703352e-48 | 7.859780e-46 |
| MsG0480022476.01 | MsG0580024418.01 | 0.811759 | 5.962276e-51 | 3.722029e-48 |
| MsG0480022476.01 | MsG0580024536.01 | 0.810991 | 8.753010e-51 | 5.355296e-48 |
| MsG0480022476.01 | MsG0580024781.01 | 0.847485 | 1.122668e-59 | 1.998477e-56 |
| MsG0480022476.01 | MsG0580024960.01 | 0.806847 | 6.742082e-50 | 3.698140e-47 |
| MsG0480022476.01 | MsG0580024996.01 | 0.811521 | 6.716175e-51 | 4.166551e-48 |
| MsG0480022476.01 | MsG0580025008.01 | 0.803850 | 2.863599e-49 | 1.454377e-46 |
| MsG0480022476.01 | MsG0580025009.01 | 0.807508 | 4.883579e-50 | 2.725166e-47 |
| MsG0480022476.01 | MsG0580025025.01 | 0.829668 | 4.524887e-55 | 4.662532e-52 |
| MsG0480022476.01 | MsG0580025237.01 | 0.819486 | 1.132601e-52 | 8.727598e-50 |
| MsG0480022476.01 | MsG0580025922.01 | 0.801668 | 8.075685e-49 | 3.879118e-46 |
| MsG0480022476.01 | MsG0580025986.01 | 0.814165 | 1.770528e-51 | 1.179211e-48 |
| MsG0480022476.01 | MsG0580026067.01 | 0.804652 | 1.949249e-49 | 1.010600e-46 |
| MsG0480022476.01 | MsG0580026225.01 | 0.808781 | 2.616745e-50 | 1.509592e-47 |
| MsG0480022476.01 | MsG0580026664.01 | 0.803678 | 3.107798e-49 | 1.571382e-46 |
| MsG0480022476.01 | MsG0580027449.01 | 0.828470 | 8.833921e-55 | 8.788695e-52 |
| MsG0480022476.01 | MsG0580029349.01 | 0.810974 | 8.824779e-51 | 5.396743e-48 |
| MsG0480022476.01 | MsG0580029478.01 | 0.817296 | 3.550166e-52 | 2.575255e-49 |
| MsG0480022476.01 | MsG0580029639.01 | 0.815002 | 1.155387e-51 | 7.871670e-49 |
| MsG0480022476.01 | MsG0580029651.01 | 0.819548 | 1.096230e-52 | 8.461795e-50 |
| MsG0480022476.01 | MsG0580029762.01 | 0.825437 | 4.690682e-54 | 4.275057e-51 |
| MsG0480022476.01 | MsG0680030413.01 | 0.838462 | 2.834903e-57 | 3.799945e-54 |
| MsG0480022476.01 | MsG0680031061.01 | 0.819278 | 1.263116e-52 | 9.676396e-50 |
| MsG0480022476.01 | MsG0680034037.01 | 0.835440 | 1.675950e-56 | 2.049546e-53 |
| MsG0480022476.01 | MsG0680035340.01 | 0.862413 | 5.157713e-64 | 1.509246e-60 |
| MsG0480022476.01 | MsG0780036548.01 | 0.838798 | 2.321024e-57 | 3.143138e-54 |
| MsG0480022476.01 | MsG0780036630.01 | 0.811080 | 8.370035e-51 | 5.132517e-48 |
| MsG0480022476.01 | MsG0780036633.01 | 0.804561 | 2.036487e-49 | 1.053330e-46 |
| MsG0480022476.01 | MsG0780036635.01 | 0.850798 | 1.345385e-60 | 2.666729e-57 |
| MsG0480022476.01 | MsG0780036773.01 | 0.816199 | 6.255555e-52 | 4.403792e-49 |
| MsG0480022476.01 | MsG0780037287.01 | 0.840233 | 9.838794e-58 | 1.392634e-54 |
| MsG0480022476.01 | MsG0780038092.01 | 0.819398 | 1.186258e-52 | 9.118001e-50 |
| MsG0480022476.01 | MsG0780038644.01 | 0.810210 | 1.290948e-50 | 7.734655e-48 |
| MsG0480022476.01 | MsG0780039144.01 | 0.812953 | 3.270517e-51 | 2.107746e-48 |
| MsG0480022476.01 | MsG0780039777.01 | 0.808216 | 3.453299e-50 | 1.963123e-47 |
| MsG0480022476.01 | MsG0780040044.01 | 0.805506 | 1.291862e-49 | 6.846278e-47 |
| MsG0480022476.01 | MsG0780040176.01 | 0.818297 | 2.109841e-52 | 1.573121e-49 |
| MsG0480022476.01 | MsG0780040254.01 | 0.828632 | 8.068908e-55 | 8.065592e-52 |
| MsG0480022476.01 | MsG0780040262.01 | 0.812362 | 4.403990e-51 | 2.794530e-48 |
| MsG0480022476.01 | MsG0780040712.01 | 0.801784 | 7.646200e-49 | 3.683592e-46 |
| MsG0480022476.01 | MsG0780041187.01 | 0.802329 | 5.906379e-49 | 2.885393e-46 |
| MsG0480022476.01 | MsG0780041210.01 | 0.814147 | 1.786468e-51 | 1.189279e-48 |
| MsG0480022476.01 | MsG0780041368.01 | 0.815029 | 1.139877e-51 | 7.771432e-49 |
| MsG0480022476.01 | MsG0780041432.01 | 0.804402 | 2.197831e-49 | 1.132117e-46 |
| MsG0480022476.01 | MsG0780041498.01 | 0.900272 | 8.644340e-78 | 1.109557e-73 |
| MsG0480022476.01 | MsG0780041754.01 | 0.802224 | 6.210124e-49 | 3.025409e-46 |
| MsG0480022476.01 | MsG0880042052.01 | 0.837854 | 4.065921e-57 | 5.349957e-54 |
| MsG0480022476.01 | MsG0880042792.01 | 0.818010 | 2.450230e-52 | 1.812528e-49 |
| MsG0480022476.01 | MsG0880042972.01 | 0.813307 | 2.735072e-51 | 1.779741e-48 |
| MsG0480022476.01 | MsG0880043059.01 | 0.801775 | 7.678129e-49 | 3.698114e-46 |
| MsG0480022476.01 | MsG0880043116.01 | 0.801306 | 9.584248e-49 | 4.561818e-46 |
| MsG0480022476.01 | MsG0880043172.01 | 0.820000 | 8.643523e-53 | 6.756644e-50 |
| MsG0480022476.01 | MsG0880043532.01 | 0.802794 | 4.736883e-49 | 2.341602e-46 |
| MsG0480022476.01 | MsG0880043804.01 | 0.866170 | 3.467283e-65 | 1.157601e-61 |
| MsG0480022476.01 | MsG0880045736.01 | 0.816061 | 6.713321e-52 | 4.708367e-49 |
| MsG0480022476.01 | MsG0880045754.01 | 0.836201 | 1.074847e-56 | 1.345199e-53 |
| MsG0480022476.01 | MsG0880045869.01 | 0.812088 | 5.055443e-51 | 3.184074e-48 |
| MsG0480022476.01 | MsG0880046020.01 | 0.807968 | 3.900098e-50 | 2.202493e-47 |
| MsG0480022476.01 | MsG0880046532.01 | 0.809536 | 1.802592e-50 | 1.061129e-47 |
| MsG0480022476.01 | MsG0880046561.01 | 0.817428 | 3.314968e-52 | 2.413558e-49 |
| MsG0480022476.01 | MsG0880046790.01 | 0.821657 | 3.593322e-53 | 2.941397e-50 |
| MsG0480022476.01 | MsG0880047764.01 | 0.813108 | 3.024999e-51 | 1.957599e-48 |
| MsG0380015564.01 | MsG0480022476.01 | 0.801686 | 8.009518e-49 | 3.848950e-46 |
| MsG0380015614.01 | MsG0480022476.01 | 0.829398 | 5.264806e-55 | 5.382235e-52 |
| MsG0380015702.01 | MsG0480022476.01 | 0.809049 | 2.293071e-50 | 1.332399e-47 |
| MsG0380016187.01 | MsG0480022476.01 | 0.813456 | 2.536956e-51 | 1.657642e-48 |
| MsG0380016227.01 | MsG0480022476.01 | 0.811556 | 6.598698e-51 | 4.097426e-48 |
| MsG0380016407.01 | MsG0480022476.01 | 0.839587 | 1.449602e-57 | 2.010924e-54 |
| MsG0380016581.01 | MsG0480022476.01 | 0.802196 | 6.291375e-49 | 3.062793e-46 |
| MsG0380016624.01 | MsG0480022476.01 | 0.813807 | 2.123425e-51 | 1.400650e-48 |
| MsG0380016752.01 | MsG0480022476.01 | 0.840659 | 7.613051e-58 | 1.091824e-54 |
| MsG0380016859.01 | MsG0480022476.01 | 0.800222 | 1.594467e-48 | 7.383680e-46 |
| MsG0380016971.01 | MsG0480022476.01 | 0.804027 | 2.630289e-49 | 1.341982e-46 |
| MsG0380017140.01 | MsG0480022476.01 | 0.818162 | 2.263332e-52 | 1.681311e-49 |
| MsG0380017210.01 | MsG0480022476.01 | 0.805241 | 1.467727e-49 | 7.725740e-47 |
| MsG0380017229.01 | MsG0480022476.01 | 0.801726 | 7.859374e-49 | 3.780634e-46 |
| MsG0380017375.01 | MsG0480022476.01 | 0.828428 | 9.040372e-55 | 8.983556e-52 |
| MsG0380017403.01 | MsG0480022476.01 | 0.804298 | 2.310209e-49 | 1.186866e-46 |
| MsG0380017495.01 | MsG0480022476.01 | 0.809598 | 1.748406e-50 | 1.030959e-47 |
| MsG0380017528.01 | MsG0480022476.01 | 0.826861 | 2.149982e-54 | 2.040769e-51 |
| MsG0380017607.01 | MsG0480022476.01 | 0.801417 | 9.093376e-49 | 4.340339e-46 |
| MsG0380017719.01 | MsG0480022476.01 | 0.804201 | 2.420593e-49 | 1.240440e-46 |
| MsG0280006461.01 | MsG0480022476.01 | 0.818380 | 2.020342e-52 | 1.510007e-49 |
| MsG0280006770.01 | MsG0480022476.01 | 0.830633 | 2.630762e-55 | 2.787611e-52 |
| MsG0280006906.01 | MsG0480022476.01 | 0.817474 | 3.235813e-52 | 2.358974e-49 |
| MsG0280007072.01 | MsG0480022476.01 | 0.811705 | 6.125526e-51 | 3.818421e-48 |
| MsG0280007088.01 | MsG0480022476.01 | 0.828530 | 8.541921e-55 | 8.513089e-52 |
| MsG0280007529.01 | MsG0480022476.01 | 0.804197 | 2.424980e-49 | 1.242568e-46 |
| MsG0280007564.01 | MsG0480022476.01 | 0.808021 | 3.800307e-50 | 2.149173e-47 |
| MsG0280007585.01 | MsG0480022476.01 | 0.840706 | 7.396417e-58 | 1.062382e-54 |
| MsG0280007645.01 | MsG0480022476.01 | 0.806702 | 7.235162e-50 | 3.953591e-47 |
| MsG0280007710.01 | MsG0480022476.01 | 0.803818 | 2.907049e-49 | 1.475220e-46 |
| MsG0280007745.01 | MsG0480022476.01 | 0.837923 | 3.902627e-57 | 5.145681e-54 |
| MsG0280007872.01 | MsG0480022476.01 | 0.846004 | 2.851913e-59 | 4.840668e-56 |
| MsG0280007984.01 | MsG0480022476.01 | 0.820616 | 6.244616e-53 | 4.965102e-50 |
| MsG0280008030.01 | MsG0480022476.01 | 0.826094 | 3.275291e-54 | 3.041586e-51 |
| MsG0280008039.01 | MsG0480022476.01 | 0.801717 | 7.891251e-49 | 3.795165e-46 |
| MsG0280008363.01 | MsG0480022476.01 | 0.801406 | 9.139555e-49 | 4.361180e-46 |
| MsG0280008502.01 | MsG0480022476.01 | 0.815939 | 7.148431e-52 | 4.996458e-49 |
| MsG0280009024.01 | MsG0480022476.01 | 0.800351 | 1.501303e-48 | 6.975135e-46 |
| MsG0280009350.01 | MsG0480022476.01 | 0.816540 | 5.246837e-52 | 3.728079e-49 |
| MsG0280010233.01 | MsG0480022476.01 | 0.825495 | 4.544817e-54 | 4.149131e-51 |
| MsG0280010447.01 | MsG0480022476.01 | 0.862203 | 5.985061e-64 | 1.738555e-60 |
| MsG0280010531.01 | MsG0480022476.01 | 0.816215 | 6.203061e-52 | 4.368810e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022476.01.T01 | MTR_4g090460 | 95.604 | 273 | 12 | 0 | 2 | 274 | 112 | 384 | 0.0 | 510 |
| MsG0480022476.01.T01 | MTR_4g090460 | 83.333 | 90 | 15 | 0 | 89 | 178 | 108 | 197 | 3.43e-43 | 155 |
| MsG0480022476.01.T01 | MTR_4g090460 | 95.413 | 218 | 10 | 0 | 57 | 274 | 1 | 218 | 1.16e-140 | 402 |
| MsG0480022476.01.T01 | MTR_4g090460 | 84.884 | 86 | 13 | 0 | 2 | 87 | 37 | 122 | 6.92e-44 | 154 |
| MsG0480022476.01.T01 | MTR_2g012600 | 56.180 | 267 | 110 | 5 | 15 | 274 | 303 | 569 | 2.53e-68 | 225 |
| MsG0480022476.01.T01 | MTR_2g012600 | 56.548 | 168 | 66 | 3 | 5 | 168 | 109 | 273 | 1.02e-42 | 155 |
| MsG0480022476.01.T01 | MTR_2g012600 | 55.952 | 168 | 67 | 3 | 5 | 168 | 201 | 365 | 2.70e-42 | 154 |
| MsG0480022476.01.T01 | MTR_2g012600 | 64.384 | 73 | 26 | 0 | 11 | 83 | 391 | 463 | 5.47e-19 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 53 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGATCTCGCCTGGTGTTTC+AGG | 0.123019 | 4:+73066264 | MsG0480022476.01.T01:CDS |
| GAGATTACGCCTGGTGTTTC+AGG | 0.146830 | 4:+73066537 | MsG0480022476.01.T01:CDS |
| ACATGTTCCTTCACAGAAAT+TGG | 0.179613 | 4:+73066389 | MsG0480022476.01.T01:CDS |
| ACTCGCTTCATTAATATTTC+TGG | 0.224605 | 4:-73066673 | None:intergenic |
| TGTGAAGGAACATGTGATTC+TGG | 0.321301 | 4:-73066381 | None:intergenic |
| TGTGAAGGAACATCTAATTC+TGG | 0.326164 | 4:-73066108 | None:intergenic |
| GGTGAGGTTGTCAAATCTTC+TGG | 0.339149 | 4:+73066759 | MsG0480022476.01.T01:CDS |
| GGAGAACACGAACTTGAAAA+AGG | 0.362922 | 4:+73066791 | MsG0480022476.01.T01:CDS |
| CAGAAGACATTGCTGGAACT+TGG | 0.372442 | 4:-73066506 | None:intergenic |
| GACAACCTCACCACAGTTGC+TGG | 0.380777 | 4:-73066748 | None:intergenic |
| ATTCAAAACTTTCTCATGTT+CGG | 0.403224 | 4:-73066565 | None:intergenic |
| TCAAAGGATGGGCTATCTGC+TGG | 0.419315 | 4:+73066168 | MsG0480022476.01.T01:CDS |
| CACATCAAACCGATACAAAC+TGG | 0.424104 | 4:+73066199 | MsG0480022476.01.T01:CDS |
| AAAGGAGAGGAAAGAGAAAG+AGG | 0.432152 | 4:+73066640 | MsG0480022476.01.T01:CDS |
| ATGTCTTCAGAAGACATTGC+TGG | 0.442846 | 4:-73066240 | None:intergenic |
| ATGTCTTCAGAAGACATTGC+TGG | 0.442846 | 4:-73066513 | None:intergenic |
| CAGAAGACATTGCTGGAACC+TGG | 0.448111 | 4:-73066233 | None:intergenic |
| AGATCTCGCCTGGTGTTTCA+GGG | 0.481234 | 4:+73066265 | MsG0480022476.01.T01:CDS |
| TGGTAGAACTTTCTTTCAGC+CGG | 0.484226 | 4:-73066728 | None:intergenic |
| ATCAACTAAAGGGAGTGAAC+AGG | 0.485140 | 4:-73066915 | None:intergenic |
| ACTAAAGAGTTGTCAAAGGA+TGG | 0.489392 | 4:+73066156 | MsG0480022476.01.T01:CDS |
| AGATTACGCCTGGTGTTTCA+GGG | 0.501278 | 4:+73066538 | MsG0480022476.01.T01:CDS |
| CTGTCGCAAGCATGATAGCC+AGG | 0.522128 | 4:+73066878 | MsG0480022476.01.T01:CDS |
| GAAGACATGGAGATCTCGCC+TGG | 0.524803 | 4:+73066255 | MsG0480022476.01.T01:CDS |
| ACTAAAGAGACGTCAAAGGA+TGG | 0.530356 | 4:+73066429 | MsG0480022476.01.T01:CDS |
| GATAAGTTGACAGATACAGC+TGG | 0.532080 | 4:+73066318 | MsG0480022476.01.T01:CDS |
| GAGAGGAAAGAGAAAGAGGA+AGG | 0.532691 | 4:+73066644 | MsG0480022476.01.T01:CDS |
| GGTAGAACTTTCTTTCAGCC+GGG | 0.535651 | 4:-73066727 | None:intergenic |
| TCAAAGGATGGGTTATCTGC+TGG | 0.536634 | 4:+73066441 | MsG0480022476.01.T01:CDS |
| ACTCTCTCCAATTTCTGTGA+AGG | 0.536812 | 4:-73066396 | None:intergenic |
| AAACTGGTCTCATGAATGCC+AGG | 0.546467 | 4:+73066215 | MsG0480022476.01.T01:CDS |
| CTTGTTGACAACAACTCAGT+TGG | 0.548851 | 4:+73066084 | MsG0480022476.01.T01:CDS |
| CAAAGGATGGGCTATCTGCT+GGG | 0.550496 | 4:+73066169 | MsG0480022476.01.T01:CDS |
| TTCATGAGACCAGTTTGTAT+CGG | 0.551753 | 4:-73066208 | None:intergenic |
| GAAGACATGGAGATTACGCC+TGG | 0.563944 | 4:+73066528 | MsG0480022476.01.T01:CDS |
| CTAAAGAGTTGTCAAAGGAT+GGG | 0.572945 | 4:+73066157 | MsG0480022476.01.T01:CDS |
| ACTCTCTCTAATTTCTGTGA+AGG | 0.579129 | 4:-73066123 | None:intergenic |
| GGATGGAACGAAAGATCTGA+TGG | 0.581786 | 4:+73066812 | MsG0480022476.01.T01:CDS |
| CTAAAGAGACGTCAAAGGAT+GGG | 0.581958 | 4:+73066430 | MsG0480022476.01.T01:CDS |
| AGCAATGTCTTCTGAAGACA+TGG | 0.586266 | 4:+73066242 | MsG0480022476.01.T01:CDS |
| AGCAATGTCTTCTGAAGACA+TGG | 0.586266 | 4:+73066515 | MsG0480022476.01.T01:CDS |
| TTCTACTAAAGAGTTGTCAA+AGG | 0.593159 | 4:+73066152 | MsG0480022476.01.T01:CDS |
| TTGACAGAGACTGTATATGA+AGG | 0.607121 | 4:+73066597 | MsG0480022476.01.T01:CDS |
| GAAAGTTCTACCAGCAACTG+TGG | 0.627439 | 4:+73066738 | MsG0480022476.01.T01:CDS |
| TCAATAGACCCTGAAACACC+AGG | 0.632152 | 4:-73066273 | None:intergenic |
| TTCAACTAAAGAGACGTCAA+AGG | 0.633541 | 4:+73066425 | MsG0480022476.01.T01:CDS |
| TCGGTTGACCCTGAAACACC+AGG | 0.635035 | 4:-73066546 | None:intergenic |
| TTCTACCAGCAACTGTGGTG+AGG | 0.636519 | 4:+73066743 | MsG0480022476.01.T01:CDS |
| CAAATCTTCTGGTGTAACTG+AGG | 0.640200 | 4:+73066770 | MsG0480022476.01.T01:CDS |
| ATAAGTTGACAGATACAGCT+GGG | 0.644236 | 4:+73066319 | MsG0480022476.01.T01:CDS |
| GAGACTGTATATGAAGGACA+TGG | 0.658527 | 4:+73066603 | MsG0480022476.01.T01:CDS |
| CTGTATATGAAGGACATGGA+GGG | 0.672772 | 4:+73066607 | MsG0480022476.01.T01:CDS |
| ACTGTATATGAAGGACATGG+AGG | 0.676971 | 4:+73066606 | MsG0480022476.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATTCAAAACTTTCTCATGTT+CGG | - | Chr4:73066295-73066314 | None:intergenic | 25.0% |
| !!! | GATTCTGTTTTGGAAATTAA+AGG | + | Chr4:73066843-73066862 | MsG0480022476.01.T01:CDS | 25.0% |
| ACTCGCTTCATTAATATTTC+TGG | - | Chr4:73066676-73066695 | None:intergenic | 30.0% | |
| TTCTACTAAAGAGTTGTCAA+AGG | + | Chr4:73066152-73066171 | MsG0480022476.01.T01:CDS | 30.0% | |
| !! | ATTTTTCAATTGATGTGTCC+CGG | + | Chr4:73066709-73066728 | MsG0480022476.01.T01:CDS | 30.0% |
| !!! | ATGGAGGGTGTTTTAAAAAA+AGG | + | Chr4:73066622-73066641 | MsG0480022476.01.T01:CDS | 30.0% |
| AACACGAACTTGAAAAAGGA+TGG | + | Chr4:73066795-73066814 | MsG0480022476.01.T01:CDS | 35.0% | |
| ACATGTTCCTTCACAGAAAT+TGG | + | Chr4:73066389-73066408 | MsG0480022476.01.T01:CDS | 35.0% | |
| ACTAAAGAGTTGTCAAAGGA+TGG | + | Chr4:73066156-73066175 | MsG0480022476.01.T01:CDS | 35.0% | |
| ACTCTCTCTAATTTCTGTGA+AGG | - | Chr4:73066126-73066145 | None:intergenic | 35.0% | |
| CTAAAGAGTTGTCAAAGGAT+GGG | + | Chr4:73066157-73066176 | MsG0480022476.01.T01:CDS | 35.0% | |
| TGTGAAGGAACATCTAATTC+TGG | - | Chr4:73066111-73066130 | None:intergenic | 35.0% | |
| TTCAACTAAAGAGACGTCAA+AGG | + | Chr4:73066425-73066444 | MsG0480022476.01.T01:CDS | 35.0% | |
| TTCATGAGACCAGTTTGTAT+CGG | - | Chr4:73066211-73066230 | None:intergenic | 35.0% | |
| TTGACAGAGACTGTATATGA+AGG | + | Chr4:73066597-73066616 | MsG0480022476.01.T01:CDS | 35.0% | |
| ! | ATAAGTTGACAGATACAGCT+GGG | + | Chr4:73066319-73066338 | MsG0480022476.01.T01:CDS | 35.0% |
| ! | ATTCTTGAGACCAGTTTTTC+TGG | - | Chr4:73066485-73066504 | None:intergenic | 35.0% |
| ! | GGCGATTTTAGATTCTGTTT+TGG | + | Chr4:73066833-73066852 | MsG0480022476.01.T01:CDS | 35.0% |
| ! | TTCTTGAGACCAGTTTTTCT+GGG | - | Chr4:73066484-73066503 | None:intergenic | 35.0% |
| !!! | GGGTGTTTTAAAAAAAGGAG+AGG | + | Chr4:73066627-73066646 | MsG0480022476.01.T01:CDS | 35.0% |
| AAAGGAGAGGAAAGAGAAAG+AGG | + | Chr4:73066640-73066659 | MsG0480022476.01.T01:CDS | 40.0% | |
| ACTAAAGAGACGTCAAAGGA+TGG | + | Chr4:73066429-73066448 | MsG0480022476.01.T01:CDS | 40.0% | |
| ACTCTCTCCAATTTCTGTGA+AGG | - | Chr4:73066399-73066418 | None:intergenic | 40.0% | |
| ACTGTATATGAAGGACATGG+AGG | + | Chr4:73066606-73066625 | MsG0480022476.01.T01:CDS | 40.0% | |
| ATGTCTTCAGAAGACATTGC+TGG | - | Chr4:73066243-73066262 | None:intergenic | 40.0% | |
| CAAATCTTCTGGTGTAACTG+AGG | + | Chr4:73066770-73066789 | MsG0480022476.01.T01:CDS | 40.0% | |
| CACATCAAACCCAGAAAAAC+TGG | + | Chr4:73066472-73066491 | MsG0480022476.01.T01:CDS | 40.0% | |
| CACATCAAACCGATACAAAC+TGG | + | Chr4:73066199-73066218 | MsG0480022476.01.T01:CDS | 40.0% | |
| CTAAAGAGACGTCAAAGGAT+GGG | + | Chr4:73066430-73066449 | MsG0480022476.01.T01:CDS | 40.0% | |
| CTGTATATGAAGGACATGGA+GGG | + | Chr4:73066607-73066626 | MsG0480022476.01.T01:CDS | 40.0% | |
| CTTGTTGACAACAACTCAGT+TGG | + | Chr4:73066084-73066103 | MsG0480022476.01.T01:CDS | 40.0% | |
| GAGACTGTATATGAAGGACA+TGG | + | Chr4:73066603-73066622 | MsG0480022476.01.T01:CDS | 40.0% | |
| GGAGAACACGAACTTGAAAA+AGG | + | Chr4:73066791-73066810 | MsG0480022476.01.T01:CDS | 40.0% | |
| TGGTAGAACTTTCTTTCAGC+CGG | - | Chr4:73066731-73066750 | None:intergenic | 40.0% | |
| TGTGAAGGAACATGTGATTC+TGG | - | Chr4:73066384-73066403 | None:intergenic | 40.0% | |
| ! | AGCAATGTCTTCTGAAGACA+TGG | + | Chr4:73066242-73066261 | MsG0480022476.01.T01:CDS | 40.0% |
| ! | CAGGATCTTTTACACATACC+TGG | - | Chr4:73066899-73066918 | None:intergenic | 40.0% |
| ! | GATAAGTTGACAGATACAGC+TGG | + | Chr4:73066318-73066337 | MsG0480022476.01.T01:CDS | 40.0% |
| AGATTACGCCTGGTGTTTCA+GGG | + | Chr4:73066538-73066557 | MsG0480022476.01.T01:CDS | 45.0% | |
| CAGAAGACATTGCTGGAACT+TGG | - | Chr4:73066509-73066528 | None:intergenic | 45.0% | |
| GAAAGTTCTACCAGCAACTG+TGG | + | Chr4:73066738-73066757 | MsG0480022476.01.T01:CDS | 45.0% | |
| GAGAGGAAAGAGAAAGAGGA+AGG | + | Chr4:73066644-73066663 | MsG0480022476.01.T01:CDS | 45.0% | |
| GGATGGAACGAAAGATCTGA+TGG | + | Chr4:73066812-73066831 | MsG0480022476.01.T01:CDS | 45.0% | |
| GGTAGAACTTTCTTTCAGCC+GGG | - | Chr4:73066730-73066749 | None:intergenic | 45.0% | |
| GGTGAGGTTGTCAAATCTTC+TGG | + | Chr4:73066759-73066778 | MsG0480022476.01.T01:CDS | 45.0% | |
| TCAATAGACCCTGAAACACC+AGG | - | Chr4:73066276-73066295 | None:intergenic | 45.0% | |
| ! | AAACTGGTCTCATGAATGCC+AGG | + | Chr4:73066215-73066234 | MsG0480022476.01.T01:CDS | 45.0% |
| !! | TCAAAGGATGGGTTATCTGC+TGG | + | Chr4:73066441-73066460 | MsG0480022476.01.T01:CDS | 45.0% |
| AGATCTCGCCTGGTGTTTCA+GGG | + | Chr4:73066265-73066284 | MsG0480022476.01.T01:CDS | 50.0% | |
| CAGAAGACATTGCTGGAACC+TGG | - | Chr4:73066236-73066255 | None:intergenic | 50.0% | |
| GAAGACATGGAGATTACGCC+TGG | + | Chr4:73066528-73066547 | MsG0480022476.01.T01:CDS | 50.0% | |
| GAGATTACGCCTGGTGTTTC+AGG | + | Chr4:73066537-73066556 | MsG0480022476.01.T01:CDS | 50.0% | |
| TTCTACCAGCAACTGTGGTG+AGG | + | Chr4:73066743-73066762 | MsG0480022476.01.T01:CDS | 50.0% | |
| !! | CAAAGGATGGGCTATCTGCT+GGG | + | Chr4:73066169-73066188 | MsG0480022476.01.T01:CDS | 50.0% |
| !! | TCAAAGGATGGGCTATCTGC+TGG | + | Chr4:73066168-73066187 | MsG0480022476.01.T01:CDS | 50.0% |
| CTGTCGCAAGCATGATAGCC+AGG | + | Chr4:73066878-73066897 | MsG0480022476.01.T01:CDS | 55.0% | |
| GAAGACATGGAGATCTCGCC+TGG | + | Chr4:73066255-73066274 | MsG0480022476.01.T01:CDS | 55.0% | |
| GACAACCTCACCACAGTTGC+TGG | - | Chr4:73066751-73066770 | None:intergenic | 55.0% | |
| GAGATCTCGCCTGGTGTTTC+AGG | + | Chr4:73066264-73066283 | MsG0480022476.01.T01:CDS | 55.0% | |
| TCGGTTGACCCTGAAACACC+AGG | - | Chr4:73066549-73066568 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 73066078 | 73066932 | 73066078 | ID=MsG0480022476.01;Name=MsG0480022476.01 |
| Chr4 | mRNA | 73066078 | 73066932 | 73066078 | ID=MsG0480022476.01.T01;Parent=MsG0480022476.01;Name=MsG0480022476.01.T01;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|284 |
| Chr4 | exon | 73066078 | 73066932 | 73066078 | ID=MsG0480022476.01.T01:exon:2773;Parent=MsG0480022476.01.T01 |
| Chr4 | CDS | 73066078 | 73066932 | 73066078 | ID=MsG0480022476.01.T01:cds;Parent=MsG0480022476.01.T01 |
| Gene Sequence |
| Protein sequence |
