AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020689.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020689.01.T02 MTR_4g057190 98.551 69 1 0 1 69 1 69 7.80e-46 145
MsG0480020689.01.T01 MTR_4g057200 96.205 527 17 1 78 604 19 542 0.0 1058
MsG0480020689.01.T01 MTR_8g085840 35.316 538 288 21 92 601 22 527 6.74e-91 291
MsG0480020689.01.T01 MTR_8g085790 36.214 486 264 16 138 601 41 502 1.42e-89 287
MsG0480020689.01.T01 MTR_8g085820 35.992 489 262 18 138 601 41 503 1.71e-88 284
MsG0480020689.01.T01 MTR_8g085790 37.047 386 203 12 92 458 22 386 1.00e-68 228
MsG0480020689.01.T01 MTR_3g105820 28.136 558 324 20 71 582 5 531 5.54e-52 187
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020689.01.T02 AT5G22875 79.710 69 14 0 1 69 1 69 8.61e-37 117
MsG0480020689.01.T02 AT5G22875 79.710 69 14 0 1 69 1 69 8.61e-37 117
MsG0480020689.01.T02 AT5G22875 79.710 69 14 0 1 69 1 69 8.61e-37 117
MsG0480020689.01.T01 AT3G44880 68.324 543 156 7 68 604 5 537 0.0 782
MsG0480020689.01.T01 AT4G25650 33.539 486 273 13 146 603 73 536 1.37e-82 269
MsG0480020689.01.T01 AT4G25650 32.220 509 272 14 146 603 73 559 2.57e-79 261
MsG0480020689.01.T01 AT2G24820 27.679 560 321 20 75 594 18 533 4.55e-53 190

Find 211 sgRNAs with CRISPR-Local

Find 575 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTCCTGTTTCTGTTTC+TGG -0.047754 4:-46267088 None:intergenic
GCCTACGCCGTTTCAGCTTC+TGG 0.120106 4:+46267293 MsG0480020689.01.T01:CDS
GCCAGACAACTTATACTATT+TGG 0.150261 4:-46263607 None:intergenic
CATGAACTTGATCTCAAATT+AGG 0.156524 4:-46263222 None:intergenic
ATGAAGCATTTAACCATTTC+CGG 0.196738 4:-46265086 None:intergenic
TAAGAAGAAGTGAATGAATT+TGG 0.210447 4:+46263198 MsG0480020689.01.T01:five_prime_UTR
GATTCATTTGTTAACAATAT+TGG 0.215139 4:+46263557 MsG0480020689.01.T01:five_prime_UTR
CACTTCTAACTGTTACTAAA+AGG 0.221780 4:-46267110 None:intergenic
CGAGGACCTTATATTAATAC+TGG 0.230807 4:+46263142 MsG0480020689.01.T01:five_prime_UTR
ATAACATGGTGCAATAAATT+TGG 0.238122 4:-46269640 None:intergenic
TCACCCTTCCATTGGCATTA+AGG 0.260734 4:+46263885 MsG0480020689.01.T01:five_prime_UTR
CTCAGGGATTGCTCTTTGTT+TGG 0.265240 4:+46268098 MsG0480020689.01.T01:CDS
TTTCTCCTGTTTCTGTTTCT+GGG 0.271424 4:-46267087 None:intergenic
CTGCTCTTGCCGAACCATTC+AGG 0.272155 4:-46270656 None:intergenic
TTCTTATAAGTTTCATAATC+AGG 0.280504 4:-46263181 None:intergenic
ATGGTTAAATGCTTCATTCT+TGG 0.294001 4:+46265092 MsG0480020689.01.T01:CDS
ATATCCATATTACCCATTTC+TGG 0.295421 4:-46270047 None:intergenic
CGATGCCTTGTAAACACTTC+AGG 0.305585 4:-46263733 None:intergenic
GATCTCACTTTCAAAAGTTA+TGG 0.306933 4:+46263421 MsG0480020689.01.T01:five_prime_UTR
AGATCTTCAATCAAAGAAAC+TGG 0.307795 4:-46267258 None:intergenic
GTTTCCTACCTTGGTGTCTC+AGG 0.314846 4:+46268081 MsG0480020689.01.T01:CDS
TGGTTAAATGCTTCATTCTT+GGG 0.316314 4:+46265093 MsG0480020689.01.T01:CDS
GTATATATGTTAAATGAGTT+TGG 0.322119 4:+46263399 MsG0480020689.01.T01:five_prime_UTR
TACTCAGCTGCGCATAGTTT+TGG 0.327030 4:+46270960 MsG0480020689.01.T01:CDS
CCTACGCCGTTTCAGCTTCT+GGG 0.330171 4:+46267294 MsG0480020689.01.T01:CDS
GGCTTTGTTGGATCAATTAC+CGG 0.331164 4:-46263097 None:intergenic
TTCTTCCAGCTCACGGTGCC+AGG 0.334083 4:+46270132 MsG0480020689.01.T01:CDS
CCGTGGTTGGTGACCAGAAA+TGG 0.334810 4:+46270034 MsG0480020689.01.T01:CDS
GGGTTTGGAGGTTTGTTTCT+TGG 0.338322 4:-46267010 None:intergenic
GATCCAACAGCACGCGCTTC+CGG 0.340404 4:-46268037 None:intergenic
ATCTCCACTCCATAGGTTAC+AGG 0.342451 4:+46269522 MsG0480020689.01.T01:intron
AGTTTCTTTGATTGAAGATC+TGG 0.343549 4:+46267260 MsG0480020689.01.T01:CDS
CTTCCTCCTTAACCCATTGT+AGG 0.346160 4:-46263919 None:intergenic
TGCTACTAGGTTTCCTACCT+TGG 0.353927 4:+46268072 MsG0480020689.01.T01:CDS
GTGACCAGAAATGGGTAATA+TGG 0.353988 4:+46270043 MsG0480020689.01.T01:CDS
ATGAACTTGATCTCAAATTA+GGG 0.358838 4:-46263221 None:intergenic
GCAACTAGTAATAAAACCTT+TGG 0.368592 4:-46271094 None:intergenic
GTTAATGTCACCGCCATTCT+CGG 0.368858 4:-46270540 None:intergenic
TTGTGTTGGCATTTAGAAAT+TGG 0.374763 4:+46270609 MsG0480020689.01.T01:CDS
GTCACCAACCACGGGGAGTT+TGG 0.380037 4:-46270025 None:intergenic
ATCAGCATCAACACTTATCT+TGG 0.380413 4:-46263762 None:intergenic
TGTGGTGAAAGTGGCTTTGT+TGG 0.403611 4:-46263109 None:intergenic
TCCAAATAGTATAAGTTGTC+TGG 0.403781 4:+46263606 MsG0480020689.01.T01:five_prime_UTR
AGATGGATTCACGTGGTTCA+TGG 0.404907 4:+46269577 MsG0480020689.01.T01:CDS
TCACGGTGCCAGGGCCTGCC+TGG 0.405008 4:+46270142 MsG0480020689.01.T01:CDS
CGCGTGCCACTGAAGGAAAT+TGG 0.405487 4:+46265124 MsG0480020689.01.T01:CDS
TTTGTTTGGCCTGATGAGAA+TGG 0.405990 4:+46268112 MsG0480020689.01.T01:CDS
AATACTGGGTCACGTGATAT+TGG 0.406093 4:+46263157 MsG0480020689.01.T01:five_prime_UTR
GCACGCGCTTCCGGACCTTC+AGG 0.406540 4:-46268028 None:intergenic
TGAAGGATGAAAAGAGAAAC+GGG 0.406694 4:-46267030 None:intergenic
CAGGCCCTGGCACCGTGAGC+TGG 0.407256 4:-46270137 None:intergenic
TGCCATAGGCTCAGCCGCTC+AGG 0.408828 4:-46263632 None:intergenic
CGTGACCCAGTATTAATATA+AGG 0.410120 4:-46263148 None:intergenic
TTCTCCCAACCATTCTCATC+AGG 0.410926 4:-46268121 None:intergenic
TGAAGCATTTAACCATTTCC+GGG 0.415523 4:-46265085 None:intergenic
ACTTTCAAAAGTTATGGAAA+TGG 0.417663 4:+46263427 MsG0480020689.01.T01:five_prime_UTR
GATGAAAAGAGAAACGGGTT+TGG 0.421451 4:-46267025 None:intergenic
GGTCCGGAAGCGCGTGCTGT+TGG 0.422340 4:+46268034 MsG0480020689.01.T01:CDS
TTCCATTGGCATTAAGGCTT+AGG 0.424132 4:+46263891 MsG0480020689.01.T01:five_prime_UTR
CTCCTAGAGCTTGTGCTACT+AGG 0.425826 4:+46268059 MsG0480020689.01.T01:CDS
ACTTGCCACCAGGCAGGCCC+TGG 0.430231 4:-46270150 None:intergenic
TGATTAATCTGTAATCTGTA+TGG 0.437504 4:+46263310 MsG0480020689.01.T01:five_prime_UTR
TGGGTCGTGAAATTGTGCTT+TGG 0.438370 4:+46267313 MsG0480020689.01.T01:CDS
TCACCACAAGCTACATTTCG+AGG 0.438997 4:+46263124 MsG0480020689.01.T01:five_prime_UTR
AGCTTGTAAAGGAGCTTATG+AGG 0.440308 4:+46270864 MsG0480020689.01.T01:CDS
AACCTGAGCGGCTGAGCCTA+TGG 0.440550 4:+46263630 MsG0480020689.01.T01:five_prime_UTR
TTGATAAGGCTAATTCTCAA+TGG 0.441751 4:+46267337 MsG0480020689.01.T01:CDS
TCAGGCTTCACCTGAAGGTC+CGG 0.443398 4:+46268018 MsG0480020689.01.T01:CDS
CAAGACCCAGAAACAGAAAC+AGG 0.444909 4:+46267082 MsG0480020689.01.T01:CDS
GATGGATTCACGTGGTTCAT+GGG 0.447972 4:+46269578 MsG0480020689.01.T01:CDS
CGAAATTTAGTAGTTGCTGC+TGG 0.448263 4:+46262927 MsG0480020689.01.T01:five_prime_UTR
GTGAAGGATGAAAAGAGAAA+CGG 0.451686 4:-46267031 None:intergenic
TTTGTTTCAAAGTTACGTTC+TGG 0.451732 4:-46262822 None:intergenic
ATCCCTCAGGCTTCACCTGA+AGG 0.455756 4:+46268013 MsG0480020689.01.T01:CDS
TTTCCTACCTTGGTGTCTCA+GGG 0.456423 4:+46268082 MsG0480020689.01.T01:CDS
CAGAAATGCAGACCCGGAAA+TGG 0.461279 4:+46265073 MsG0480020689.01.T01:exon
AATTGTGCTTTGGTTTGATA+AGG 0.463189 4:+46267323 MsG0480020689.01.T01:CDS
TGATAAGGCTAATTCTCAAT+GGG 0.464457 4:+46267338 MsG0480020689.01.T01:CDS
TGAAACGGCGTAGGCAAACT+AGG 0.465653 4:-46267285 None:intergenic
AACTTGCAGTGTTCTTATCA+TGG 0.471539 4:+46267956 MsG0480020689.01.T01:CDS
TAAACAAATCATTACATTGG+AGG 0.472678 4:-46268160 None:intergenic
CATTGGCATTAAGGCTTAGG+TGG 0.473742 4:+46263894 MsG0480020689.01.T01:five_prime_UTR
CCACGTGAATCCATCTTGAA+TGG 0.476840 4:-46269570 None:intergenic
TGTCTCAGGTGGTTCCTAGA+TGG 0.480851 4:+46270435 MsG0480020689.01.T01:intron
GCATTTCTGCAGATCGGACC+CGG 0.481628 4:-46265059 None:intergenic
ACACAACTGTTGCACCAGTC+AGG 0.489551 4:-46270909 None:intergenic
TTGCAACTAACTTAGAGTAT+AGG 0.489919 4:+46263283 MsG0480020689.01.T01:five_prime_UTR
AAAACTTACGCCATGTAGAA+AGG 0.490548 4:-46262984 None:intergenic
GGCTTAGGTGGTGCCTACAA+TGG 0.493774 4:+46263906 MsG0480020689.01.T01:five_prime_UTR
CGTGGTTGGTGACCAGAAAT+GGG 0.494565 4:+46270035 MsG0480020689.01.T01:CDS
GTGTGTAACAATGTGACATT+AGG 0.495257 4:+46271214 MsG0480020689.01.T01:three_prime_UTR
ATGTTCACCGTCGCAAACTC+TGG 0.495962 4:-46268501 None:intergenic
CGAGTCTTACCAGGTGCCAT+GGG 0.496305 4:-46270084 None:intergenic
AACCGTACTATCAAAACGTC+AGG 0.497409 4:+46270697 MsG0480020689.01.T01:CDS
AGCGTTTCTCACCCTTCCAT+TGG 0.500076 4:+46263877 MsG0480020689.01.T01:five_prime_UTR
AATGGCCAACCTGAATGGTT+CGG 0.505921 4:+46270647 MsG0480020689.01.T01:CDS
GAAAAGAGAAACGGGTTTGG+AGG 0.506495 4:-46267022 None:intergenic
GTTATGGAAATGGCTCTGTA+TGG 0.507143 4:+46263437 MsG0480020689.01.T01:five_prime_UTR
TTCAATGTCCCCATGGCACC+TGG 0.510022 4:+46270075 MsG0480020689.01.T01:CDS
AGCTGGGCTCAGGAAAGTCC+CGG 0.511897 4:+46265040 MsG0480020689.01.T01:intron
GATGCCTTGTAAACACTTCA+GGG 0.513438 4:-46263732 None:intergenic
TTTGGCCTGATGAGAATGGT+TGG 0.514461 4:+46268116 MsG0480020689.01.T01:CDS
TCGAAATTTCTTCCAGCTCA+CGG 0.516385 4:+46270125 MsG0480020689.01.T01:CDS
GCTTAGGTGGTGCCTACAAT+GGG 0.519027 4:+46263907 MsG0480020689.01.T01:five_prime_UTR
GCGAGTCTTACCAGGTGCCA+TGG 0.519997 4:-46270085 None:intergenic
ACGGCAATGGCCAACCTGAA+TGG 0.522604 4:+46270642 MsG0480020689.01.T01:CDS
TGCAGTGTTCTTATCATGGG+TGG 0.523912 4:+46267960 MsG0480020689.01.T01:CDS
CTAAAGTGTTCAGCTTGTAA+AGG 0.524879 4:+46270853 MsG0480020689.01.T01:CDS
TGGCTGAGGCGACACGGCAA+TGG 0.525095 4:+46270629 MsG0480020689.01.T01:CDS
AGGTGCCATGGGGACATTGA+AGG 0.525388 4:-46270073 None:intergenic
GTACGGTTGAAGGCAATGGC+TGG 0.525732 4:-46270682 None:intergenic
CATCTTGAATGGAAGAGGCT+TGG 0.526200 4:-46269559 None:intergenic
TCACGACCCAGAAGCTGAAA+CGG 0.528461 4:-46267300 None:intergenic
TAAACGTGTTATTACTCCAA+AGG 0.528905 4:+46271078 MsG0480020689.01.T01:exon
TTGGCCTGATGAGAATGGTT+GGG 0.528911 4:+46268117 MsG0480020689.01.T01:CDS
GAATCCATCTTGAATGGAAG+AGG 0.529803 4:-46269564 None:intergenic
ACTTGCAGTGTTCTTATCAT+GGG 0.533069 4:+46267957 MsG0480020689.01.T01:CDS
CATTTCTGGTCACCAACCAC+GGG 0.533924 4:-46270033 None:intergenic
CCTTCACATTGCATTGCCAT+AGG 0.534230 4:-46263646 None:intergenic
CTACGGCTATGATACTCTCA+TGG 0.535693 4:+46268539 MsG0480020689.01.T01:CDS
GGTTAAATGCTTCATTCTTG+GGG 0.535782 4:+46265094 MsG0480020689.01.T01:CDS
GGAAGTAAGAACAAAGTGCT+AGG 0.536576 4:-46263520 None:intergenic
CGGTGCCAGGGCCTGCCTGG+TGG 0.541920 4:+46270145 MsG0480020689.01.T01:CDS
ACGATGGAGCGAGTCTTACC+AGG 0.542041 4:-46270093 None:intergenic
GGGTCTGCATTTCTGCAGAT+CGG 0.543209 4:-46265065 None:intergenic
TTTCTCGCAGAAACCGAGAA+TGG 0.544070 4:+46270527 MsG0480020689.01.T01:CDS
CTGAAGTGTTTACAAGGCAT+CGG 0.546435 4:+46263734 MsG0480020689.01.T01:five_prime_UTR
GTCCAATGTTCATACCATCT+AGG 0.546736 4:-46270449 None:intergenic
GTGGTGCCTACAATGGGTTA+AGG 0.547849 4:+46263913 MsG0480020689.01.T01:five_prime_UTR
GGTGACATGATTGTACTTCA+AGG 0.548561 4:+46270491 MsG0480020689.01.T01:CDS
TCTTCCAGCTCACGGTGCCA+GGG 0.550242 4:+46270133 MsG0480020689.01.T01:CDS
CGGGCCGTTACACTAGTCAA+TGG 0.551375 4:+46262756 MsG0480020689.01.T01:five_prime_UTR
TGACCCCTGAAGTGTTTACA+AGG 0.551430 4:+46263728 MsG0480020689.01.T01:five_prime_UTR
AAAAGAGCAAAATCTTCTAT+GGG 0.551844 4:+46262794 MsG0480020689.01.T01:five_prime_UTR
CAAGCCTCTTCCATTCAAGA+TGG 0.553250 4:+46269560 MsG0480020689.01.T01:CDS
GCTGAGACGCGTGCCACTGA+AGG 0.555475 4:+46265117 MsG0480020689.01.T01:CDS
ATGCGCAGCTGAGTATCTGA+TGG 0.558491 4:-46270952 None:intergenic
GATAGTACGGTTGAAGGCAA+TGG 0.559294 4:-46270686 None:intergenic
CTTATGAGGGATTCCAAACA+TGG 0.560004 4:+46270878 MsG0480020689.01.T01:CDS
CACCTAAGCCTTAATGCCAA+TGG 0.560506 4:-46263893 None:intergenic
TAAGCCTTAATGCCAATGGA+AGG 0.561125 4:-46263889 None:intergenic
ATTCAGCCAATTTCCTTCAG+TGG 0.561154 4:-46265130 None:intergenic
AATCTTACTTGCCACCAGGC+AGG 0.562524 4:-46270156 None:intergenic
ATCGGCCTGTGTTGGTGTGA+AGG 0.562936 4:-46270582 None:intergenic
ACAGGCCGATCGCTTTGTGT+TGG 0.566142 4:+46270595 MsG0480020689.01.T01:CDS
TAAATTTGGAACTGATCCGC+GGG 0.568789 4:-46269626 None:intergenic
GGAAATTGGCTGAATATGTA+CGG 0.570622 4:+46265138 MsG0480020689.01.T01:CDS
AACCTAGTAGCACAAGCTCT+AGG 0.570794 4:-46268061 None:intergenic
CCATTTCTGGTCACCAACCA+CGG 0.571640 4:-46270034 None:intergenic
GACCTTCAGGTGAAGCCTGA+GGG 0.571686 4:-46268015 None:intergenic
AGGTTGTACTGTGATCCCTC+AGG 0.574608 4:+46268000 MsG0480020689.01.T01:CDS
TTCCTAGATGGTATGAACAT+TGG 0.578101 4:+46270447 MsG0480020689.01.T01:CDS
ACAAAGCGATCGGCCTGTGT+TGG 0.578127 4:-46270590 None:intergenic
CAACTAACTTAGAGTATAGG+TGG 0.580151 4:+46263286 MsG0480020689.01.T01:five_prime_UTR
GCTTGTAAAGGAGCTTATGA+GGG 0.580240 4:+46270865 MsG0480020689.01.T01:CDS
AAAACTACACTTACGGACAA+AGG 0.584684 4:-46267396 None:intergenic
ATGGATTCACGTGGTTCATG+GGG 0.586611 4:+46269579 MsG0480020689.01.T01:CDS
ATGAATCTACAGAGAAGCGC+AGG 0.589725 4:-46263541 None:intergenic
CATTTCTGCAGATCGGACCC+GGG 0.592984 4:-46265058 None:intergenic
TGGCATTTAGAAATTGGCTG+AGG 0.593473 4:+46270615 MsG0480020689.01.T01:CDS
TCTTGCCGAACCATTCAGGT+TGG 0.593673 4:-46270652 None:intergenic
ACATGTTAACATTAACATCA+AGG 0.598287 4:-46271193 None:intergenic
AGAAATTGGCTGAGGCGACA+CGG 0.601844 4:+46270623 MsG0480020689.01.T01:CDS
GAGGACCTTATATTAATACT+GGG 0.603505 4:+46263143 MsG0480020689.01.T01:five_prime_UTR
GATACCAAACTCCCCGTGGT+TGG 0.603630 4:+46270021 MsG0480020689.01.T01:CDS
AAATGCCAACACAAAGCGAT+CGG 0.604570 4:-46270600 None:intergenic
GCTGGGCTCAGGAAAGTCCC+GGG 0.605914 4:+46265041 MsG0480020689.01.T01:intron
ACATGGCAGAAAATCCTGAC+TGG 0.607454 4:+46270895 MsG0480020689.01.T01:CDS
CCATTCAAGATGGATTCACG+TGG 0.609365 4:+46269570 MsG0480020689.01.T01:CDS
CCTCACCTTCACACCAACAC+AGG 0.610530 4:+46270577 MsG0480020689.01.T01:CDS
ATGTTCCTTCAATGTCCCCA+TGG 0.611264 4:+46270068 MsG0480020689.01.T01:CDS
GAAGTAAGAACAAAGTGCTA+GGG 0.616390 4:-46263519 None:intergenic
GTTAAATGCTTCATTCTTGG+GGG 0.616390 4:+46265095 MsG0480020689.01.T01:CDS
AATGTAGCTTGTGGTGAAAG+TGG 0.617393 4:-46263118 None:intergenic
ATAAATTTGGAACTGATCCG+CGG 0.618874 4:-46269627 None:intergenic
TGAGCAAAATCAATGTGAGA+AGG 0.619222 4:-46268576 None:intergenic
TGTTCCATTGACTAGTGTAA+CGG 0.620468 4:-46262760 None:intergenic
GATCTGCAGAAATGCAGACC+CGG 0.621344 4:+46265067 MsG0480020689.01.T01:exon
GTGGTTGAAAGTGCCATCAA+TGG 0.622871 4:-46266953 None:intergenic
ATTTCGAGCACTGCAAACGA+TGG 0.623592 4:-46270109 None:intergenic
AATTGTAAATGTTAGAGATG+AGG 0.623678 4:+46271118 MsG0480020689.01.T01:three_prime_UTR
GTGCCTACAATGGGTTAAGG+AGG 0.626615 4:+46263916 MsG0480020689.01.T01:five_prime_UTR
CCTGTGTTGGTGTGAAGGTG+AGG 0.628478 4:-46270577 None:intergenic
TAGAAATCTTACTTGCCACC+AGG 0.633598 4:-46270160 None:intergenic
ATGGGTTAAGGAGGAAGACA+TGG 0.635058 4:+46263925 MsG0480020689.01.T01:five_prime_UTR
AAGCCTTAATGCCAATGGAA+GGG 0.638492 4:-46263888 None:intergenic
GGACCTTCAGGTGAAGCCTG+AGG 0.638965 4:-46268016 None:intergenic
TACTTGTTAATATAATAACA+TGG 0.641143 4:-46269654 None:intergenic
GGTCCTCGAAATGTAGCTTG+TGG 0.650550 4:-46263127 None:intergenic
GAGCAATCCCTGAGACACCA+AGG 0.653614 4:-46268089 None:intergenic
CTATGGCAATGCAATGTGAA+GGG 0.654276 4:+46263647 MsG0480020689.01.T01:five_prime_UTR
AATCCCTGAGACACCAAGGT+AGG 0.654755 4:-46268085 None:intergenic
TGTTGCTAAAGATGAAAGTG+TGG 0.655843 4:-46266972 None:intergenic
TGAACATTGGACTTCAAACA+AGG 0.656690 4:+46270460 MsG0480020689.01.T01:CDS
CTCGCAGAAACCGAGAATGG+CGG 0.656709 4:+46270530 MsG0480020689.01.T01:CDS
GACAAAGGAGCAAGACGATG+AGG 0.657329 4:-46267381 None:intergenic
GATCTTCAATCAAAGAAACT+GGG 0.658234 4:-46267257 None:intergenic
CCTATGGCAATGCAATGTGA+AGG 0.661878 4:+46263646 MsG0480020689.01.T01:five_prime_UTR
ACTTCAAACAAGGTATATGA+CGG 0.664094 4:+46270470 MsG0480020689.01.T01:CDS
CCCAGAAGCTGAAACGGCGT+AGG 0.671253 4:-46267294 None:intergenic
GAACATAGATGCAAATGCAG+AGG 0.672847 4:-46263672 None:intergenic
CCACTCCATAGGTTACAGGA+AGG 0.673834 4:+46269526 MsG0480020689.01.T01:intron
AAGTTGTCTGGCAACCTGAG+CGG 0.675358 4:+46263618 MsG0480020689.01.T01:five_prime_UTR
GAGCTAATGAAGGGAACCCG+CGG 0.685044 4:+46269610 MsG0480020689.01.T01:CDS
ATGCCTTGTAAACACTTCAG+GGG 0.689539 4:-46263731 None:intergenic
TGTAAAACCAGAGTTTGCGA+CGG 0.708528 4:+46268494 MsG0480020689.01.T01:CDS
GAGTCTTACCAGGTGCCATG+GGG 0.713819 4:-46270083 None:intergenic
GATCGATACCAAACTCCCCG+TGG 0.727360 4:+46270017 MsG0480020689.01.T01:CDS
GAAGGAAGGATTGATGAACG+TGG 0.729199 4:+46267932 MsG0480020689.01.T01:CDS
AAAATATATATACACGTACG+TGG 0.740999 4:-46271149 None:intergenic
ATTTCTGGTCACCAACCACG+GGG 0.751627 4:-46270032 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTATCAAGATATTT+TGG + Chr4:46268677-46268696 MsG0480020689.01.T01:intron 10.0%
!!! ATTTTGATAATTTTCATTTT+TGG + Chr4:46263052-46263071 MsG0480020689.01.T01:five_prime_UTR 10.0%
!!! TATTCATTTTTAATTGAAAA+GGG + Chr4:46269814-46269833 MsG0480020689.01.T01:intron 10.0%
!!! TTTAATATAACATTTTTAAG+TGG - Chr4:46268406-46268425 None:intergenic 10.0%
!!! TTTTGATAATTTTCATTTTT+GGG + Chr4:46263053-46263072 MsG0480020689.01.T01:five_prime_UTR 10.0%
!! AATTAAACAAATCATTACAT+TGG - Chr4:46268166-46268185 None:intergenic 15.0%
!! ATAAAATGAAAAATTGACTA+AGG - Chr4:46265663-46265682 None:intergenic 15.0%
!! ATAATTAACATTATTACAAG+TGG + Chr4:46266055-46266074 MsG0480020689.01.T01:intron 15.0%
!! ATTATTTCATATTATTTGTC+AGG + Chr4:46269472-46269491 MsG0480020689.01.T01:intron 15.0%
!! TGAGTGAAAATATATAAAAA+TGG - Chr4:46268785-46268804 None:intergenic 15.0%
!! TTATTTCATATTATTTGTCA+GGG + Chr4:46269473-46269492 MsG0480020689.01.T01:intron 15.0%
!!! AAACAAAATTGTTTTTTAGT+TGG - Chr4:46271029-46271048 None:intergenic 15.0%
!!! AAATGAATACTATTCTTTTA+TGG - Chr4:46269803-46269822 None:intergenic 15.0%
!!! CAATTTTGACTATATATTTT+TGG + Chr4:46265495-46265514 MsG0480020689.01.T01:intron 15.0%
!!! GTATTCATTTTTAATTGAAA+AGG + Chr4:46269813-46269832 MsG0480020689.01.T01:intron 15.0%
!!! TAATTAATTTTTAATCACCT+AGG + Chr4:46268985-46269004 MsG0480020689.01.T01:intron 15.0%
!!! TACTTGTTAATATAATAACA+TGG - Chr4:46269657-46269676 None:intergenic 15.0%
!! AAATTTAATTAAGCCATGTT+TGG + Chr4:46267444-46267463 MsG0480020689.01.T01:intron 20.0%
!! AACACTCAAAAAATCAATTT+AGG + Chr4:46262872-46262891 MsG0480020689.01.T01:five_prime_UTR 20.0%
!! AATAAAATGAAAGACAAATG+TGG - Chr4:46266516-46266535 None:intergenic 20.0%
!! ACAATTTAGTCAAAAAACAA+AGG + Chr4:46266137-46266156 MsG0480020689.01.T01:intron 20.0%
!! ACACTCAAAAAATCAATTTA+GGG + Chr4:46262873-46262892 MsG0480020689.01.T01:five_prime_UTR 20.0%
!! GTATATATGTTAAATGAGTT+TGG + Chr4:46263399-46263418 MsG0480020689.01.T01:five_prime_UTR 20.0%
!! TAAAAATCTTCCGAATAAAA+TGG - Chr4:46270327-46270346 None:intergenic 20.0%
!! TACAATAAACTTGATAAACT+AGG - Chr4:46264142-46264161 None:intergenic 20.0%
!! TGTAATGTTTCAATCTAATT+TGG - Chr4:46266574-46266593 None:intergenic 20.0%
!! TTATAAATGGCATAAGATAT+TGG - Chr4:46269219-46269238 None:intergenic 20.0%
!! TTCTTATAAGTTTCATAATC+AGG - Chr4:46263184-46263203 None:intergenic 20.0%
!!! AAACTAAGAACTATTTTTTC+AGG + Chr4:46269989-46270008 MsG0480020689.01.T01:intron 20.0%
!!! AACTTATTTTCATTTGTTTC+AGG - Chr4:46267592-46267611 None:intergenic 20.0%
!!! ACAAGTAATACATACATTTT+TGG - Chr4:46266435-46266454 None:intergenic 20.0%
!!! AGTTTTGAGTTTTTTAACAA+TGG - Chr4:46266913-46266932 None:intergenic 20.0%
!!! ATTGTTTTTTAGTTGGTTTA+TGG - Chr4:46271022-46271041 None:intergenic 20.0%
!!! GATTCATTTGTTAACAATAT+TGG + Chr4:46263557-46263576 MsG0480020689.01.T01:five_prime_UTR 20.0%
!!! TATACTTTTATTGATCTGTT+TGG + Chr4:46268438-46268457 MsG0480020689.01.T01:intron 20.0%
!!! TGAGATAGATTTTGTTATAT+TGG + Chr4:46264677-46264696 MsG0480020689.01.T01:intron 20.0%
!!! TTCTATGAAACCATTTTATT+CGG + Chr4:46270314-46270333 MsG0480020689.01.T01:intron 20.0%
!!! TTGGTAATATTTTGTATGTT+AGG + Chr4:46268457-46268476 MsG0480020689.01.T01:intron 20.0%
!!! TTGTTAATGTTGATTAATTG+AGG - Chr4:46266712-46266731 None:intergenic 20.0%
! AAAAAGAGCAAAATCTTCTA+TGG + Chr4:46262793-46262812 MsG0480020689.01.T01:five_prime_UTR 25.0%
! AAAACTAGATGACTAATGTT+GGG - Chr4:46265384-46265403 None:intergenic 25.0%
! AAAAGAGCAAAATCTTCTAT+GGG + Chr4:46262794-46262813 MsG0480020689.01.T01:five_prime_UTR 25.0%
! AAAATATATATACACGTACG+TGG - Chr4:46271152-46271171 None:intergenic 25.0%
! AAAATCTATCTCAACTATCT+TGG - Chr4:46264670-46264689 None:intergenic 25.0%
! AAACATAAAACTGTGGTTAT+AGG - Chr4:46266640-46266659 None:intergenic 25.0%
! AAAGACTATTACTTTATGCT+TGG + Chr4:46269924-46269943 MsG0480020689.01.T01:intron 25.0%
! AACATAATCTAATCTTGCAT+GGG - Chr4:46265759-46265778 None:intergenic 25.0%
! AATGTTTCAATCTAATTTGG+TGG - Chr4:46266571-46266590 None:intergenic 25.0%
! AATTGTAAATGTTAGAGATG+AGG + Chr4:46271118-46271137 MsG0480020689.01.T01:three_prime_UTR 25.0%
! ACAACAAAAAACTACACTTA+CGG - Chr4:46267406-46267425 None:intergenic 25.0%
! ACATGTTAACATTAACATCA+AGG - Chr4:46271196-46271215 None:intergenic 25.0%
! ACTTTCAAAAGTTATGGAAA+TGG + Chr4:46263427-46263446 MsG0480020689.01.T01:five_prime_UTR 25.0%
! AGTAGTGTTAGAATTTAGAA+GGG + Chr4:46264060-46264079 MsG0480020689.01.T01:intron 25.0%
! ATAACATGGTGCAATAAATT+TGG - Chr4:46269643-46269662 None:intergenic 25.0%
! ATCTTTCAATCTAATGAAAC+TGG + Chr4:46264165-46264184 MsG0480020689.01.T01:intron 25.0%
! ATGAACTTGATCTCAAATTA+GGG - Chr4:46263224-46263243 None:intergenic 25.0%
! ATGAATTATGTACTTGTTCA+TGG + Chr4:46269777-46269796 MsG0480020689.01.T01:intron 25.0%
! GAAAGATCATTACAATAAAC+TGG - Chr4:46264152-46264171 None:intergenic 25.0%
! GGCATCAAATAATGTAAAAT+GGG - Chr4:46269733-46269752 None:intergenic 25.0%
! TAAACAAATCATTACATTGG+AGG - Chr4:46268163-46268182 None:intergenic 25.0%
! TAAGAAGAAGTGAATGAATT+TGG + Chr4:46263198-46263217 MsG0480020689.01.T01:five_prime_UTR 25.0%
! TACAATAAACTGGATAAACT+TGG - Chr4:46264840-46264859 None:intergenic 25.0%
! TAGTAGTGTTAGAATTTAGA+AGG + Chr4:46264059-46264078 MsG0480020689.01.T01:intron 25.0%
! TGAGACATATTGTCTTAAAA+AGG + Chr4:46266109-46266128 MsG0480020689.01.T01:intron 25.0%
! TGATTAATCTGTAATCTGTA+TGG + Chr4:46263310-46263329 MsG0480020689.01.T01:five_prime_UTR 25.0%
! TGGCATCAAATAATGTAAAA+TGG - Chr4:46269734-46269753 None:intergenic 25.0%
! TTAAAAGCTAGATATCTAGA+GGG + Chr4:46269072-46269091 MsG0480020689.01.T01:intron 25.0%
! TTAGAAAAGTTGTTGTGATT+GGG + Chr4:46268380-46268399 MsG0480020689.01.T01:intron 25.0%
! TTAGATCATTGAACCTATTA+TGG - Chr4:46268314-46268333 None:intergenic 25.0%
! TTATTTGATGCCATCTTAAA+TGG + Chr4:46269741-46269760 MsG0480020689.01.T01:intron 25.0%
! TTGAGTTCTTATAAACATGA+TGG - Chr4:46265798-46265817 None:intergenic 25.0%
!! AAAATTGTGACTTTTTGTGA+AGG - Chr4:46267050-46267069 None:intergenic 25.0%
!! AAACTACACATTTCTTTTAC+AGG - Chr4:46264195-46264214 None:intergenic 25.0%
!! AGTTGATATAAGTCCATAAT+AGG + Chr4:46268298-46268317 MsG0480020689.01.T01:intron 25.0%
!! CAAGTTCATGTTTTCTTTAT+TGG + Chr4:46263235-46263254 MsG0480020689.01.T01:five_prime_UTR 25.0%
!! CGGAAGATTTTTAAACAAAT+TGG + Chr4:46270334-46270353 MsG0480020689.01.T01:intron 25.0%
!! CTTCATGGTTCAAATATTTT+TGG + Chr4:46265209-46265228 MsG0480020689.01.T01:intron 25.0%
!! GTCATCTAGATAGTTTATTT+TGG - Chr4:46266337-46266356 None:intergenic 25.0%
!! TGATTTTCATGATCAATTTC+TGG + Chr4:46265411-46265430 MsG0480020689.01.T01:intron 25.0%
!! TGATTTTGTTCAGTTTTTGT+AGG - Chr4:46267147-46267166 None:intergenic 25.0%
!! TGTTTTACAAATGTTTCCAT+TGG + Chr4:46264468-46264487 MsG0480020689.01.T01:intron 25.0%
!!! ACCTTTTTAGCAAAACAAAA+GGG + Chr4:46269012-46269031 MsG0480020689.01.T01:intron 25.0%
!!! CATTTTTAATTGAAAAGGGA+CGG + Chr4:46269818-46269837 MsG0480020689.01.T01:intron 25.0%
!!! CTGTTTTATTTCAAATGACA+TGG - Chr4:46265352-46265371 None:intergenic 25.0%
!!! GATTTTTAGAGATTATGCAA+GGG + Chr4:46263817-46263836 MsG0480020689.01.T01:intron 25.0%
!!! GTAAACTGATCTTTAAGATT+TGG + Chr4:46267896-46267915 MsG0480020689.01.T01:intron 25.0%
!!! TACAAATGGTTTTATTGTCT+GGG + Chr4:46263790-46263809 MsG0480020689.01.T01:intron 25.0%
!!! TATCAAGATATTTTGGTAAG+TGG + Chr4:46268684-46268703 MsG0480020689.01.T01:intron 25.0%
!!! TCAAAGTTGTGTTTTATTCT+TGG - Chr4:46270778-46270797 None:intergenic 25.0%
!!! TCTAGATATCTAGCTTTTAA+GGG - Chr4:46269072-46269091 None:intergenic 25.0%
!!! TGATTTTTAGAGATTATGCA+AGG + Chr4:46263816-46263835 MsG0480020689.01.T01:intron 25.0%
!!! TTACAAATGGTTTTATTGTC+TGG + Chr4:46263789-46263808 MsG0480020689.01.T01:intron 25.0%
!!! TTATTTTGGAGAAAAACAGT+GGG - Chr4:46266323-46266342 None:intergenic 25.0%
!!! TTCTAGGATAAAATATTTCC+AGG + Chr4:46270381-46270400 MsG0480020689.01.T01:intron 25.0%
!!! TTTATTTTGGAGAAAAACAG+TGG - Chr4:46266324-46266343 None:intergenic 25.0%
!!! TTTGTTTTTCATGTAGATGT+TGG + Chr4:46270810-46270829 MsG0480020689.01.T01:intron 25.0%
AAGTTACTCACCATTTAAGA+TGG - Chr4:46269754-46269773 None:intergenic 30.0%
AATTGTGCTAGTAATTGCTT+TGG + Chr4:46265464-46265483 MsG0480020689.01.T01:intron 30.0%
AATTTACACGAGAAGATTTC+AGG + Chr4:46266082-46266101 MsG0480020689.01.T01:intron 30.0%
ACATATAAATGCATGCTTAC+AGG + Chr4:46265528-46265547 MsG0480020689.01.T01:intron 30.0%
ACATATGTGATACCAAACAT+AGG - Chr4:46267662-46267681 None:intergenic 30.0%
ACATGAACAAGAAAATCGTT+AGG - Chr4:46270418-46270437 None:intergenic 30.0%
ACTTCAAACAAGGTATATGA+CGG + Chr4:46270470-46270489 MsG0480020689.01.T01:CDS 30.0%
AGATCTTCAATCAAAGAAAC+TGG - Chr4:46267261-46267280 None:intergenic 30.0%
AGTTTCTTTGATTGAAGATC+TGG + Chr4:46267260-46267279 MsG0480020689.01.T01:CDS 30.0%
ATATCCATATTACCCATTTC+TGG - Chr4:46270050-46270069 None:intergenic 30.0%
ATGGTTAAATGCTTCATTCT+TGG + Chr4:46265092-46265111 MsG0480020689.01.T01:CDS 30.0%
ATTGTACACGAAAATCCAAA+AGG - Chr4:46269353-46269372 None:intergenic 30.0%
ATTGTGCTAGTAATTGCTTT+GGG + Chr4:46265465-46265484 MsG0480020689.01.T01:intron 30.0%
ATTTCAATCTCCACAACTAT+TGG - Chr4:46265580-46265599 None:intergenic 30.0%
CAACATAATCTAATCTTGCA+TGG - Chr4:46265760-46265779 None:intergenic 30.0%
CACTTCTAACTGTTACTAAA+AGG - Chr4:46267113-46267132 None:intergenic 30.0%
CATGAACTTGATCTCAAATT+AGG - Chr4:46263225-46263244 None:intergenic 30.0%
CTATTATCATATGACATCAG+AGG + Chr4:46265316-46265335 MsG0480020689.01.T01:intron 30.0%
CTCAATTCGATTATGAAACA+AGG + Chr4:46265813-46265832 MsG0480020689.01.T01:intron 30.0%
CTTAAAAGCTAGATATCTAG+AGG + Chr4:46269071-46269090 MsG0480020689.01.T01:intron 30.0%
CTTAGAAAAGTTGTTGTGAT+TGG + Chr4:46268379-46268398 MsG0480020689.01.T01:intron 30.0%
GAAAACTAGATGACTAATGT+TGG - Chr4:46265385-46265404 None:intergenic 30.0%
GAAATTTACATGCAACTACA+AGG + Chr4:46266175-46266194 MsG0480020689.01.T01:intron 30.0%
GAGGACCTTATATTAATACT+GGG + Chr4:46263143-46263162 MsG0480020689.01.T01:five_prime_UTR 30.0%
GATCTCACTTTCAAAAGTTA+TGG + Chr4:46263421-46263440 MsG0480020689.01.T01:five_prime_UTR 30.0%
GATCTTCAATCAAAGAAACT+GGG - Chr4:46267260-46267279 None:intergenic 30.0%
GATGATGTATTTATGTTGCT+TGG - Chr4:46269296-46269315 None:intergenic 30.0%
GCAACTAGTAATAAAACCTT+TGG - Chr4:46271097-46271116 None:intergenic 30.0%
GTTGTTGAAGATTGAATTGA+GGG + Chr4:46267421-46267440 MsG0480020689.01.T01:intron 30.0%
TAAAAATGGAACGAACCAAA+AGG - Chr4:46268771-46268790 None:intergenic 30.0%
TATATTAACAAGTAAGCCAG+TGG + Chr4:46269663-46269682 MsG0480020689.01.T01:intron 30.0%
TCCAAATAGTATAAGTTGTC+TGG + Chr4:46263606-46263625 MsG0480020689.01.T01:five_prime_UTR 30.0%
TGATAAGGCTAATTCTCAAT+GGG + Chr4:46267338-46267357 MsG0480020689.01.T01:CDS 30.0%
TGATCACTAAATATCTGTAG+CGG + Chr4:46265907-46265926 MsG0480020689.01.T01:intron 30.0%
TGGTTAAATGCTTCATTCTT+GGG + Chr4:46265093-46265112 MsG0480020689.01.T01:CDS 30.0%
TGTGGTCCAAAAATTGTTAA+AGG + Chr4:46268741-46268760 MsG0480020689.01.T01:intron 30.0%
TGTGGTTATAGGTAATTTAC+TGG - Chr4:46266629-46266648 None:intergenic 30.0%
TGTTGTTGAAGATTGAATTG+AGG + Chr4:46267420-46267439 MsG0480020689.01.T01:intron 30.0%
TTAAGCCATGTTTGGATAAA+CGG + Chr4:46267452-46267471 MsG0480020689.01.T01:intron 30.0%
TTACAAATGTTTCCATTGGT+TGG + Chr4:46264472-46264491 MsG0480020689.01.T01:intron 30.0%
TTATGGACTTATATCAACTC+AGG - Chr4:46268297-46268316 None:intergenic 30.0%
TTCTACGAAGAATTTAGTCA+AGG + Chr4:46268892-46268911 MsG0480020689.01.T01:intron 30.0%
TTCTATACAAGCAATTTGAG+AGG + Chr4:46264237-46264256 MsG0480020689.01.T01:intron 30.0%
TTGATAAGGCTAATTCTCAA+TGG + Chr4:46267337-46267356 MsG0480020689.01.T01:CDS 30.0%
TTGCAACTAACTTAGAGTAT+AGG + Chr4:46263283-46263302 MsG0480020689.01.T01:five_prime_UTR 30.0%
TTGGTTTATGGAAAAAGCTA+AGG - Chr4:46271010-46271029 None:intergenic 30.0%
TTGTACACGAAAATCCAAAA+GGG - Chr4:46269352-46269371 None:intergenic 30.0%
TTTGTTTCAAAGTTACGTTC+TGG - Chr4:46262825-46262844 None:intergenic 30.0%
! AAAATGTGTAGTTTGAGTTC+AGG + Chr4:46264903-46264922 MsG0480020689.01.T01:intron 30.0%
! AGTACTTTTCATACGAATTC+TGG + Chr4:46269698-46269717 MsG0480020689.01.T01:intron 30.0%
! ATGAAGCATTTAACCATTTC+CGG - Chr4:46265089-46265108 None:intergenic 30.0%
! GGTTTTCAGTGTATTAGAAA+GGG - Chr4:46269198-46269217 None:intergenic 30.0%
! GTTTTGTAGACAATGGAAAA+CGG - Chr4:46270756-46270775 None:intergenic 30.0%
! TAAACGTGTTATTACTCCAA+AGG + Chr4:46271078-46271097 MsG0480020689.01.T01:exon 30.0%
! TACAAATGTTTCCATTGGTT+GGG + Chr4:46264473-46264492 MsG0480020689.01.T01:intron 30.0%
! TGGTTTTCAGTGTATTAGAA+AGG - Chr4:46269199-46269218 None:intergenic 30.0%
! TTGTGTTGGCATTTAGAAAT+TGG + Chr4:46270609-46270628 MsG0480020689.01.T01:CDS 30.0%
! TTTTGTTCAGTTTTTGTAGG+TGG - Chr4:46267144-46267163 None:intergenic 30.0%
!! AACAAAAAAAGCACCATTGA+TGG + Chr4:46266940-46266959 MsG0480020689.01.T01:CDS 30.0%
!! AATTGTGCTTTGGTTTGATA+AGG + Chr4:46267323-46267342 MsG0480020689.01.T01:CDS 30.0%
!! ACTGATCTTTAAGATTTGGT+TGG + Chr4:46267900-46267919 MsG0480020689.01.T01:intron 30.0%
!! CACCTTTTTAGCAAAACAAA+AGG + Chr4:46269011-46269030 MsG0480020689.01.T01:intron 30.0%
!! GATGCTGATTGTTTTACAAA+TGG + Chr4:46263776-46263795 MsG0480020689.01.T01:intron 30.0%
!! TATAAACATGATGGTGCTTT+TGG - Chr4:46265789-46265808 None:intergenic 30.0%
!! TGAAAAGTACTTTCATGCAA+AGG - Chr4:46269689-46269708 None:intergenic 30.0%
!!! ACAAATGGTTTTATTGTCTG+GGG + Chr4:46263791-46263810 MsG0480020689.01.T01:intron 30.0%
!!! ACATACATTTTTGGTACTTG+TGG - Chr4:46266426-46266445 None:intergenic 30.0%
!!! ATTCTTGGTTTTGTAGACAA+TGG - Chr4:46270763-46270782 None:intergenic 30.0%
!!! CTCTAGATATCTAGCTTTTA+AGG - Chr4:46269073-46269092 None:intergenic 30.0%
!!! TCCCTTTTGTTTTGCTAAAA+AGG - Chr4:46269016-46269035 None:intergenic 30.0%
!!! TGGTTCAAATATTTTTGGAC+TGG + Chr4:46265214-46265233 MsG0480020689.01.T01:intron 30.0%
!!! TTCAATCTTTTCAAGTTTGG+TGG - Chr4:46263858-46263877 None:intergenic 30.0%
AAAACTACACTTACGGACAA+AGG - Chr4:46267399-46267418 None:intergenic 35.0%
AAAACTTACGCCATGTAGAA+AGG - Chr4:46262987-46263006 None:intergenic 35.0%
AAATATGATCTCCACTCCAT+AGG + Chr4:46269515-46269534 MsG0480020689.01.T01:intron 35.0%
AACACGGGTATGAACATTAT+CGG + Chr4:46266209-46266228 MsG0480020689.01.T01:intron 35.0%
AACGAATGGAAAGAAAACAG+CGG - Chr4:46269953-46269972 None:intergenic 35.0%
AACTTGACATTATAGTGTGC+TGG + Chr4:46268622-46268641 MsG0480020689.01.T01:intron 35.0%
AACTTGCAGTGTTCTTATCA+TGG + Chr4:46267956-46267975 MsG0480020689.01.T01:CDS 35.0%
AAGGCAACTAGAGTCAAAAT+CGG + Chr4:46264400-46264419 MsG0480020689.01.T01:intron 35.0%
ACAGCGAATAATTTCTGTCA+AGG - Chr4:46270269-46270288 None:intergenic 35.0%
ACTTATTTGAGCTCATCTAC+TGG - Chr4:46267818-46267837 None:intergenic 35.0%
ACTTGCAGTGTTCTTATCAT+GGG + Chr4:46267957-46267976 MsG0480020689.01.T01:CDS 35.0%
AGAGTTAGTAGCATTAGAAC+AGG + Chr4:46264736-46264755 MsG0480020689.01.T01:intron 35.0%
ATCAGCATCAACACTTATCT+TGG - Chr4:46263765-46263784 None:intergenic 35.0%
ATCGGTTGAACTAAGTCTTA+CGG + Chr4:46266227-46266246 MsG0480020689.01.T01:intron 35.0%
CAAACACTTGTAAGAGCTTA+TGG - Chr4:46267793-46267812 None:intergenic 35.0%
CAAACTTCGAAAATCAAGTG+AGG - Chr4:46265854-46265873 None:intergenic 35.0%
CAACTAACTTAGAGTATAGG+TGG + Chr4:46263286-46263305 MsG0480020689.01.T01:five_prime_UTR 35.0%
CCATAAATCATCAAGTAGCA+TGG - Chr4:46269326-46269345 None:intergenic 35.0%
CCTTAAAAGCTAGCTATCAA+GGG + Chr4:46269264-46269283 MsG0480020689.01.T01:intron 35.0%
CGAGCTAAATACCCTAATTA+CGG + Chr4:46268350-46268369 MsG0480020689.01.T01:intron 35.0%
CGAGGACCTTATATTAATAC+TGG + Chr4:46263142-46263161 MsG0480020689.01.T01:five_prime_UTR 35.0%
CGTGACCCAGTATTAATATA+AGG - Chr4:46263151-46263170 None:intergenic 35.0%
CTAAGAAACCACCGTAATTA+GGG - Chr4:46268364-46268383 None:intergenic 35.0%
CTTAAAAGCTAGCTATCAAG+GGG + Chr4:46269265-46269284 MsG0480020689.01.T01:intron 35.0%
CTTGTAGTGTCATATAAACG+TGG - Chr4:46266284-46266303 None:intergenic 35.0%
GACCATGAATAGGTGTTAAT+AGG + Chr4:46265005-46265024 MsG0480020689.01.T01:intron 35.0%
GACCTATTAACACCTATTCA+TGG - Chr4:46265010-46265029 None:intergenic 35.0%
GAGCTACTAATTACAATCCA+TGG - Chr4:46266663-46266682 None:intergenic 35.0%
GCCAGACAACTTATACTATT+TGG - Chr4:46263610-46263629 None:intergenic 35.0%
GGAAATTGGCTGAATATGTA+CGG + Chr4:46265138-46265157 MsG0480020689.01.T01:CDS 35.0%
GGTACTTGGGTACTTATAAA+TGG - Chr4:46269232-46269251 None:intergenic 35.0%
GGTTAAATGCTTCATTCTTG+GGG + Chr4:46265094-46265113 MsG0480020689.01.T01:CDS 35.0%
GTGAAGGATGAAAAGAGAAA+CGG - Chr4:46267034-46267053 None:intergenic 35.0%
GTGTGTAACAATGTGACATT+AGG + Chr4:46271214-46271233 MsG0480020689.01.T01:three_prime_UTR 35.0%
GTTAAATGCTTCATTCTTGG+GGG + Chr4:46265095-46265114 MsG0480020689.01.T01:CDS 35.0%
TAACACCTATTCATGGTCAA+AGG - Chr4:46265003-46265022 None:intergenic 35.0%
TAGAACAGGAAAAGATGTTG+TGG + Chr4:46264750-46264769 MsG0480020689.01.T01:intron 35.0%
TAGATGACTAATGTTGGGTT+GGG - Chr4:46265379-46265398 None:intergenic 35.0%
TAGTAAGTACCCAAGCATTT+GGG + Chr4:46269039-46269058 MsG0480020689.01.T01:intron 35.0%
TATGCAAGTGTTAACGTGTT+GGG + Chr4:46266362-46266381 MsG0480020689.01.T01:intron 35.0%
TATTAAGATTGTGTGACCTC+TGG + Chr4:46264282-46264301 MsG0480020689.01.T01:intron 35.0%
TCCATGGAAACATAAAACTG+TGG - Chr4:46266647-46266666 None:intergenic 35.0%
TCCTTAAAAGCTAGCTATCA+AGG + Chr4:46269263-46269282 MsG0480020689.01.T01:intron 35.0%
TCTAAGAAACCACCGTAATT+AGG - Chr4:46268365-46268384 None:intergenic 35.0%
TGAACATTGGACTTCAAACA+AGG + Chr4:46270460-46270479 MsG0480020689.01.T01:CDS 35.0%
TGAAGGATGAAAAGAGAAAC+GGG - Chr4:46267033-46267052 None:intergenic 35.0%
TGAATGTGAGTGATTCTGAA+TGG + Chr4:46263961-46263980 MsG0480020689.01.T01:intron 35.0%
TGAGCAAAATCAATGTGAGA+AGG - Chr4:46268579-46268598 None:intergenic 35.0%
TGGAGTTACTAAGTAGAGAT+AGG + Chr4:46263981-46264000 MsG0480020689.01.T01:intron 35.0%
TGTTGCTAAAGATGAAAGTG+TGG - Chr4:46266975-46266994 None:intergenic 35.0%
TTAAGCCGTTTATCCAAACA+TGG - Chr4:46267460-46267479 None:intergenic 35.0%
TTAGTAAGTACCCAAGCATT+TGG + Chr4:46269038-46269057 MsG0480020689.01.T01:intron 35.0%
TTATAAGTACCCAAGTACCT+GGG + Chr4:46269233-46269252 MsG0480020689.01.T01:intron 35.0%
TTATATGACACTACAAGCCA+TGG + Chr4:46266287-46266306 MsG0480020689.01.T01:intron 35.0%
TTATGCAAGTGTTAACGTGT+TGG + Chr4:46266361-46266380 MsG0480020689.01.T01:intron 35.0%
TTCAATCTTCTCAAGTTTGC+TGG - Chr4:46264540-46264559 None:intergenic 35.0%
TTCCTAGATGGTATGAACAT+TGG + Chr4:46270447-46270466 MsG0480020689.01.T01:CDS 35.0%
TTGGTTGTTACCAATAGTTG+TGG + Chr4:46265567-46265586 MsG0480020689.01.T01:intron 35.0%
TTTAGAAGGGAAAAATGCTG+TGG + Chr4:46264073-46264092 MsG0480020689.01.T01:intron 35.0%
TTTATAAGTACCCAAGTACC+TGG + Chr4:46269232-46269251 MsG0480020689.01.T01:intron 35.0%
TTTGTGCAATAAGCACATGT+AGG + Chr4:46265870-46265889 MsG0480020689.01.T01:intron 35.0%
! AATGGCTTTTCCTTTCTACA+TGG + Chr4:46262974-46262993 MsG0480020689.01.T01:five_prime_UTR 35.0%
! ACAAATGTTTCCATTGGTTG+GGG + Chr4:46264474-46264493 MsG0480020689.01.T01:intron 35.0%
! AGTTTTCATGGAGAGATCAT+TGG + Chr4:46267232-46267251 MsG0480020689.01.T01:CDS 35.0%
! ATAAATTTGGAACTGATCCG+CGG - Chr4:46269630-46269649 None:intergenic 35.0%
! ATTCAGCGTGATCTTTTCTA+CGG + Chr4:46268522-46268541 MsG0480020689.01.T01:CDS 35.0%
! ATTGTTAAAGGAGAGCCTTT+TGG + Chr4:46268753-46268772 MsG0480020689.01.T01:intron 35.0%
! ATTTCGTTCTTTTCAGCTTC+TGG - Chr4:46267177-46267196 None:intergenic 35.0%
! CCATGCTACTTGATGATTTA+TGG + Chr4:46269323-46269342 MsG0480020689.01.T01:intron 35.0%
! CTAAAGTGTTCAGCTTGTAA+AGG + Chr4:46270853-46270872 MsG0480020689.01.T01:CDS 35.0%
! GAAATGTGTAGTTTGAGTTC+AGG + Chr4:46264201-46264220 MsG0480020689.01.T01:intron 35.0%
! GAAGTAAGAACAAAGTGCTA+GGG - Chr4:46263522-46263541 None:intergenic 35.0%
! GATTTTCTTGTTCATGTCTC+AGG + Chr4:46270421-46270440 MsG0480020689.01.T01:intron 35.0%
! GGCTCTCCTTTAACAATTTT+TGG - Chr4:46268750-46268769 None:intergenic 35.0%
! GTTCTTCATCGAAGTTTTCA+TGG + Chr4:46267220-46267239 MsG0480020689.01.T01:CDS 35.0%
! TGAAGCATTTAACCATTTCC+GGG - Chr4:46265088-46265107 None:intergenic 35.0%
! TGCTACTTGATGATTTATGG+TGG + Chr4:46269326-46269345 MsG0480020689.01.T01:intron 35.0%
! TGTTCCATTGACTAGTGTAA+CGG - Chr4:46262763-46262782 None:intergenic 35.0%
! TTTCGTTCTTTTCAGCTTCT+GGG - Chr4:46267176-46267195 None:intergenic 35.0%
!! ACCACAGTTTTATGTTTCCA+TGG + Chr4:46266643-46266662 MsG0480020689.01.T01:intron 35.0%
!! CAAGTTTGAAGAGTGTTCAA+AGG - Chr4:46266473-46266492 None:intergenic 35.0%
!! GAGTGTTCAAAGGTTGATAT+AGG - Chr4:46266463-46266482 None:intergenic 35.0%
!! GGGAATGATTTCTAGCAATT+GGG + Chr4:46264494-46264513 MsG0480020689.01.T01:intron 35.0%
!! TACCTGACGTTTTGATAGTA+CGG - Chr4:46270702-46270721 None:intergenic 35.0%
!! TTTCTCCTGTTTCTGTTTCT+GGG - Chr4:46267090-46267109 None:intergenic 35.0%
!!! AAGATTTGGTTGGTTTTTGC+AGG + Chr4:46267910-46267929 MsG0480020689.01.T01:intron 35.0%
!!! AGATATCTAGCTTTTAAGGG+AGG - Chr4:46269069-46269088 None:intergenic 35.0%
!!! CATTGATTTTGCTCATCACA+AGG + Chr4:46268584-46268603 MsG0480020689.01.T01:CDS 35.0%
!!! CGCTTCAATCTTTTCAAGTT+TGG - Chr4:46263861-46263880 None:intergenic 35.0%
!!! GATAGCTAGCTTTTAAGGAA+GGG - Chr4:46269262-46269281 None:intergenic 35.0%
!!! GATATCTAGCTTTTAAGGGA+GGG - Chr4:46269068-46269087 None:intergenic 35.0%
!!! TCTGGTTTTACAAAGTCATC+AGG - Chr4:46268486-46268505 None:intergenic 35.0%
!!! TGATAGCTAGCTTTTAAGGA+AGG - Chr4:46269263-46269282 None:intergenic 35.0%
!!! TTTTAGTTCGTCGAAGAAAC+CGG + Chr4:46263078-46263097 MsG0480020689.01.T01:five_prime_UTR 35.0%
AAATGCCAACACAAAGCGAT+CGG - Chr4:46270603-46270622 None:intergenic 40.0%
AACCGTACTATCAAAACGTC+AGG + Chr4:46270697-46270716 MsG0480020689.01.T01:CDS 40.0%
AACTATGTGTGAAAGGCCAA+AGG + Chr4:46265249-46265268 MsG0480020689.01.T01:intron 40.0%
AAGACAAATGTGGCGTAATG+AGG - Chr4:46266506-46266525 None:intergenic 40.0%
AAGCCTTAATCCCAATGGAA+GGG - Chr4:46264573-46264592 None:intergenic 40.0%
AAGCCTTAATGCCAATGGAA+GGG - Chr4:46263891-46263910 None:intergenic 40.0%
AAGGTTTCAACTTCGAACAC+GGG + Chr4:46266194-46266213 MsG0480020689.01.T01:intron 40.0%
AATACTGGGTCACGTGATAT+TGG + Chr4:46263157-46263176 MsG0480020689.01.T01:five_prime_UTR 40.0%
AATATGTACGGTCACTCACA+CGG + Chr4:46265150-46265169 MsG0480020689.01.T01:intron 40.0%
ACCTTGCTTCTACAAAGTCA+CGG + Chr4:46267699-46267718 MsG0480020689.01.T01:intron 40.0%
ACGGTATCTACCTCGATATT+TGG + Chr4:46269837-46269856 MsG0480020689.01.T01:intron 40.0%
AGAAATCATTCCCCAACCAA+TGG - Chr4:46264487-46264506 None:intergenic 40.0%
AGAAGCTCTTAGCCTATGTT+TGG + Chr4:46267647-46267666 MsG0480020689.01.T01:intron 40.0%
AGCTTGTAAAGGAGCTTATG+AGG + Chr4:46270864-46270883 MsG0480020689.01.T01:CDS 40.0%
AGTAAGTACCCAAGCATTTG+GGG + Chr4:46269040-46269059 MsG0480020689.01.T01:intron 40.0%
ATATGGAGGCTTACACTTCA+TGG + Chr4:46265194-46265213 MsG0480020689.01.T01:intron 40.0%
ATCCTAGAAGTCGATGTTAG+AGG - Chr4:46270370-46270389 None:intergenic 40.0%
ATGCACTCATGTGAAACTGT+TGG - Chr4:46266000-46266019 None:intergenic 40.0%
ATGCCTTGTAAACACTTCAG+GGG - Chr4:46263734-46263753 None:intergenic 40.0%
ATTCAGCCAATTTCCTTCAG+TGG - Chr4:46265133-46265152 None:intergenic 40.0%
CAAGGTTTCAACTTCGAACA+CGG + Chr4:46266193-46266212 MsG0480020689.01.T01:intron 40.0%
CACATATGTCAGAATCACGA+TGG + Chr4:46267673-46267692 MsG0480020689.01.T01:intron 40.0%
CATCTCTGATACCAGAATCA+TGG - Chr4:46265437-46265456 None:intergenic 40.0%
CCTCGATATTTGGATGATTG+CGG + Chr4:46269847-46269866 MsG0480020689.01.T01:intron 40.0%
CGAAATTTAGTAGTTGCTGC+TGG + Chr4:46262927-46262946 MsG0480020689.01.T01:five_prime_UTR 40.0%
CTAGATGACTAATGTTGGGT+TGG - Chr4:46265380-46265399 None:intergenic 40.0%
CTATGGCAATGCAATGTGAA+GGG + Chr4:46263647-46263666 MsG0480020689.01.T01:five_prime_UTR 40.0%
CTGCAGTAACTATGTGTGAA+AGG + Chr4:46265242-46265261 MsG0480020689.01.T01:intron 40.0%
CTGTCAATGAAACATTCACG+TGG - Chr4:46270222-46270241 None:intergenic 40.0%
CTTATGAGGGATTCCAAACA+TGG + Chr4:46270878-46270897 MsG0480020689.01.T01:CDS 40.0%
GAACACTCTTCAAACTTGTG+TGG + Chr4:46266475-46266494 MsG0480020689.01.T01:intron 40.0%
GAACATAGATGCAAATGCAG+AGG - Chr4:46263675-46263694 None:intergenic 40.0%
GAATCCATCTTGAATGGAAG+AGG - Chr4:46269567-46269586 None:intergenic 40.0%
GACCTATTCACACCAATTCA+TGG - Chr4:46264308-46264327 None:intergenic 40.0%
GAGGTTAAGAAACTAGTTGC+TGG + Chr4:46268927-46268946 MsG0480020689.01.T01:intron 40.0%
GATGCCTTGTAAACACTTCA+GGG - Chr4:46263735-46263754 None:intergenic 40.0%
GCTAAATACCCTAATTACGG+TGG + Chr4:46268353-46268372 MsG0480020689.01.T01:intron 40.0%
GCTTGTAAAGGAGCTTATGA+GGG + Chr4:46270865-46270884 MsG0480020689.01.T01:CDS 40.0%
GGAGACACTTTCTAAACTGT+GGG + Chr4:46265282-46265301 MsG0480020689.01.T01:intron 40.0%
GGTGACATGATTGTACTTCA+AGG + Chr4:46270491-46270510 MsG0480020689.01.T01:CDS 40.0%
GTCCAATGTTCATACCATCT+AGG - Chr4:46270452-46270471 None:intergenic 40.0%
GTGACCAGAAATGGGTAATA+TGG + Chr4:46270043-46270062 MsG0480020689.01.T01:CDS 40.0%
TAAGCCTTAATCCCAATGGA+AGG - Chr4:46264574-46264593 None:intergenic 40.0%
TAAGCCTTAATGCCAATGGA+AGG - Chr4:46263892-46263911 None:intergenic 40.0%
TAGAAATCTTACTTGCCACC+AGG - Chr4:46270163-46270182 None:intergenic 40.0%
TATAAGTACCCAAGTACCTG+GGG + Chr4:46269234-46269253 MsG0480020689.01.T01:intron 40.0%
TATACCAAGTGATGCTGATG+TGG + Chr4:46268723-46268742 MsG0480020689.01.T01:intron 40.0%
TCGAAATTTCTTCCAGCTCA+CGG + Chr4:46270125-46270144 MsG0480020689.01.T01:CDS 40.0%
TGACTTTGTAGAAGCAAGGT+GGG - Chr4:46267699-46267718 None:intergenic 40.0%
TGAGCTTCAAAACCAACGAA+TGG - Chr4:46269967-46269986 None:intergenic 40.0%
TGCAATAAGCACATGTAGGT+AGG + Chr4:46265874-46265893 MsG0480020689.01.T01:intron 40.0%
TGGAGACACTTTCTAAACTG+TGG + Chr4:46265281-46265300 MsG0480020689.01.T01:intron 40.0%
TGGCATTTAGAAATTGGCTG+AGG + Chr4:46270615-46270634 MsG0480020689.01.T01:CDS 40.0%
TGTAAAACCAGAGTTTGCGA+CGG + Chr4:46268494-46268513 MsG0480020689.01.T01:CDS 40.0%
TGTGACCTTTGACCATGAAT+AGG + Chr4:46264995-46265014 MsG0480020689.01.T01:intron 40.0%
TTCCATTGGCATTAAGGCTT+AGG + Chr4:46263891-46263910 MsG0480020689.01.T01:five_prime_UTR 40.0%
TTCCATTGGGATTAAGGCTT+AGG + Chr4:46264573-46264592 MsG0480020689.01.T01:intron 40.0%
TTTCTTGTTCATGTCTCAGG+TGG + Chr4:46270424-46270443 MsG0480020689.01.T01:intron 40.0%
TTTGTTTGGCCTGATGAGAA+TGG + Chr4:46268112-46268131 MsG0480020689.01.T01:CDS 40.0%
! AATGTAGCTTGTGGTGAAAG+TGG - Chr4:46263121-46263140 None:intergenic 40.0%
! AGATGACTAATGTTGGGTTG+GGG - Chr4:46265378-46265397 None:intergenic 40.0%
! ATAGGTCCTTTGTTATGAGC+TGG + Chr4:46264321-46264340 MsG0480020689.01.T01:intron 40.0%
! ATGATTTATGGTGGCCCTTT+TGG + Chr4:46269335-46269354 MsG0480020689.01.T01:intron 40.0%
! CTGAAGTGTTTACAAGGCAT+CGG + Chr4:46263734-46263753 MsG0480020689.01.T01:five_prime_UTR 40.0%
! GATGAAAAGAGAAACGGGTT+TGG - Chr4:46267028-46267047 None:intergenic 40.0%
! GGAAGTAAGAACAAAGTGCT+AGG - Chr4:46263523-46263542 None:intergenic 40.0%
! GTTATGGAAATGGCTCTGTA+TGG + Chr4:46263437-46263456 MsG0480020689.01.T01:five_prime_UTR 40.0%
! TAAATTTGGAACTGATCCGC+GGG - Chr4:46269629-46269648 None:intergenic 40.0%
! TAGGTCCTTTGTTATGAGCT+GGG + Chr4:46264322-46264341 MsG0480020689.01.T01:intron 40.0%
! TATCATGGGTGGTCTTTTGA+TGG + Chr4:46267971-46267990 MsG0480020689.01.T01:CDS 40.0%
! TCAGGATTTTCTGCCATGTT+TGG - Chr4:46270894-46270913 None:intergenic 40.0%
! TTGCTAAAAAGGTGCAACCT+AGG - Chr4:46269005-46269024 None:intergenic 40.0%
! TTGCTCAATAGTGTCACTGT+CGG - Chr4:46266797-46266816 None:intergenic 40.0%
!! AACCTCTAACATCGACTTCT+AGG + Chr4:46270365-46270384 MsG0480020689.01.T01:intron 40.0%
!! AGGTGCTTTGCTTTAGAGAT+TGG + Chr4:46265548-46265567 MsG0480020689.01.T01:intron 40.0%
!! CGTTTTGATAGTACGGTTGA+AGG - Chr4:46270695-46270714 None:intergenic 40.0%
!! GATTTCTAGCAATTGGGTAG+CGG + Chr4:46264500-46264519 MsG0480020689.01.T01:intron 40.0%
!! GCTGTTTTCTTTCCATTCGT+TGG + Chr4:46269952-46269971 MsG0480020689.01.T01:intron 40.0%
!! GCTTTTCAGGAGCTAATGAA+GGG + Chr4:46269601-46269620 MsG0480020689.01.T01:CDS 40.0%
!! GGCTTTGTTGGATCAATTAC+CGG - Chr4:46263100-46263119 None:intergenic 40.0%
!! GGGGAATGATTTCTAGCAAT+TGG + Chr4:46264493-46264512 MsG0480020689.01.T01:intron 40.0%
!! GTTTCTCCTGTTTCTGTTTC+TGG - Chr4:46267091-46267110 None:intergenic 40.0%
!! TCAATTTCTGGCCATGATTC+TGG + Chr4:46265423-46265442 MsG0480020689.01.T01:intron 40.0%
!! TTACTTGCTTTTGCTTCAGC+AGG + Chr4:46262951-46262970 MsG0480020689.01.T01:five_prime_UTR 40.0%
!! TTTTGACTCTAGTTGCCTTG+TGG - Chr4:46264399-46264418 None:intergenic 40.0%
!! TTTTTGGTACTTGTGGACCA+GGG - Chr4:46266419-46266438 None:intergenic 40.0%
!!! ATTTTTGGTACTTGTGGACC+AGG - Chr4:46266420-46266439 None:intergenic 40.0%
!!! CCCTTGATAGCTAGCTTTTA+AGG - Chr4:46269267-46269286 None:intergenic 40.0%
!!! CGTGGTTTTATCGAAGAGAA+TGG - Chr4:46270204-46270223 None:intergenic 40.0%
!!! TTTGGTTGGTTTTTGCAGGA+AGG + Chr4:46267914-46267933 MsG0480020689.01.T01:intron 40.0%
AACCTAGTAGCACAAGCTCT+AGG - Chr4:46268064-46268083 None:intergenic 45.0%
AATGGCCAACCTGAATGGTT+CGG + Chr4:46270647-46270666 MsG0480020689.01.T01:CDS 45.0%
ACATGGCAGAAAATCCTGAC+TGG + Chr4:46270895-46270914 MsG0480020689.01.T01:CDS 45.0%
ACCGTGACTTTGTAGAAGCA+AGG - Chr4:46267703-46267722 None:intergenic 45.0%
ATAAGTACCCAAGTACCTGG+GGG + Chr4:46269235-46269254 MsG0480020689.01.T01:intron 45.0%
ATCTCCACTCCATAGGTTAC+AGG + Chr4:46269522-46269541 MsG0480020689.01.T01:intron 45.0%
ATGGATTCACGTGGTTCATG+GGG + Chr4:46269579-46269598 MsG0480020689.01.T01:CDS 45.0%
ATGTTCCTTCAATGTCCCCA+TGG + Chr4:46270068-46270087 MsG0480020689.01.T01:CDS 45.0%
CAAGACCCAGAAACAGAAAC+AGG + Chr4:46267082-46267101 MsG0480020689.01.T01:CDS 45.0%
CAAGCCTCTTCCATTCAAGA+TGG + Chr4:46269560-46269579 MsG0480020689.01.T01:CDS 45.0%
CAAGTCACAACCACAACTTG+CGG + Chr4:46265972-46265991 MsG0480020689.01.T01:intron 45.0%
CACCTAAGCCTTAATCCCAA+TGG - Chr4:46264578-46264597 None:intergenic 45.0%
CACCTAAGCCTTAATGCCAA+TGG - Chr4:46263896-46263915 None:intergenic 45.0%
CATCTTGAATGGAAGAGGCT+TGG - Chr4:46269562-46269581 None:intergenic 45.0%
CATTGGCATTAAGGCTTAGG+TGG + Chr4:46263894-46263913 MsG0480020689.01.T01:five_prime_UTR 45.0%
CATTGGGATTAAGGCTTAGG+TGG + Chr4:46264576-46264595 MsG0480020689.01.T01:intron 45.0%
CCACGTGAATCCATCTTGAA+TGG - Chr4:46269573-46269592 None:intergenic 45.0%
CCCTGAGATTTACCGACATA+CGG + Chr4:46264433-46264452 MsG0480020689.01.T01:intron 45.0%
CCGCAATCATCCAAATATCG+AGG - Chr4:46269850-46269869 None:intergenic 45.0%
CCGTATGTCGGTAAATCTCA+GGG - Chr4:46264436-46264455 None:intergenic 45.0%
CCTATGGCAATGCAATGTGA+AGG + Chr4:46263646-46263665 MsG0480020689.01.T01:five_prime_UTR 45.0%
CCTGAGATTTACCGACATAC+GGG + Chr4:46264434-46264453 MsG0480020689.01.T01:intron 45.0%
CCTTCACATTGCATTGCCAT+AGG - Chr4:46263649-46263668 None:intergenic 45.0%
CGATGCCTTGTAAACACTTC+AGG - Chr4:46263736-46263755 None:intergenic 45.0%
CTACGGCTATGATACTCTCA+TGG + Chr4:46268539-46268558 MsG0480020689.01.T01:CDS 45.0%
CTCAGGGATTGCTCTTTGTT+TGG + Chr4:46268098-46268117 MsG0480020689.01.T01:CDS 45.0%
CTTAATCCCAATGGAAGGGT+GGG - Chr4:46264569-46264588 None:intergenic 45.0%
CTTCCTCCTTAACCCATTGT+AGG - Chr4:46263922-46263941 None:intergenic 45.0%
GAAGGAAGGATTGATGAACG+TGG + Chr4:46267932-46267951 MsG0480020689.01.T01:CDS 45.0%
GAGTTGCGACTAACATATGG+AGG + Chr4:46265180-46265199 MsG0480020689.01.T01:intron 45.0%
GATAGTACGGTTGAAGGCAA+TGG - Chr4:46270689-46270708 None:intergenic 45.0%
GCTCTCTACGATGCTTTACT+CGG + Chr4:46269144-46269163 MsG0480020689.01.T01:intron 45.0%
GGCCATGAATTGGTGTGAAT+AGG + Chr4:46264303-46264322 MsG0480020689.01.T01:intron 45.0%
GTATTAGAAAGGGCTCCCTA+TGG - Chr4:46269188-46269207 None:intergenic 45.0%
GTGACTTTGTAGAAGCAAGG+TGG - Chr4:46267700-46267719 None:intergenic 45.0%
GTTAATGTCACCGCCATTCT+CGG - Chr4:46270543-46270562 None:intergenic 45.0%
GTTGGTGTAGCAGGTAATGT+AGG + Chr4:46264784-46264803 MsG0480020689.01.T01:intron 45.0%
TACTTTCATGCAAAGGCCAC+TGG - Chr4:46269682-46269701 None:intergenic 45.0%
TATGTTAGTCGCAACTCGCA+AGG - Chr4:46265177-46265196 None:intergenic 45.0%
TCACCACAAGCTACATTTCG+AGG + Chr4:46263124-46263143 MsG0480020689.01.T01:five_prime_UTR 45.0%
TCACCCTTCCATTGGCATTA+AGG + Chr4:46263885-46263904 MsG0480020689.01.T01:five_prime_UTR 45.0%
TCGGTAAATCTCAGGGCAAA+GGG - Chr4:46264429-46264448 None:intergenic 45.0%
TCTCTCCTTCCTGTAACCTA+TGG - Chr4:46269534-46269553 None:intergenic 45.0%
TCTGTAGCGGCGTTATAAAG+TGG + Chr4:46265920-46265939 MsG0480020689.01.T01:intron 45.0%
TGACACTACAAGCCATGGTT+TGG + Chr4:46266292-46266311 MsG0480020689.01.T01:intron 45.0%
TGCAATGAGTGTGACTCAGT+TGG + Chr4:46268241-46268260 MsG0480020689.01.T01:intron 45.0%
TGCAGTGTTCTTATCATGGG+TGG + Chr4:46267960-46267979 MsG0480020689.01.T01:CDS 45.0%
TGCGAGTTGCGACTAACATA+TGG + Chr4:46265177-46265196 MsG0480020689.01.T01:intron 45.0%
TGCTACTAGGTTTCCTACCT+TGG + Chr4:46268072-46268091 MsG0480020689.01.T01:CDS 45.0%
TGCTTCTACAAAGTCACGGT+AGG + Chr4:46267703-46267722 MsG0480020689.01.T01:intron 45.0%
TGGGTCGTGAAATTGTGCTT+TGG + Chr4:46267313-46267332 MsG0480020689.01.T01:CDS 45.0%
TTCTCCCAACCATTCTCATC+AGG - Chr4:46268124-46268143 None:intergenic 45.0%
TTGGCCTGATGAGAATGGTT+GGG + Chr4:46268117-46268136 MsG0480020689.01.T01:CDS 45.0%
TTTCTCGCAGAAACCGAGAA+TGG + Chr4:46270527-46270546 MsG0480020689.01.T01:CDS 45.0%
TTTGGCCTGATGAGAATGGT+TGG + Chr4:46268116-46268135 MsG0480020689.01.T01:CDS 45.0%
! AGATGGATTCACGTGGTTCA+TGG + Chr4:46269577-46269596 MsG0480020689.01.T01:CDS 45.0%
! AGTTGTGGTTGTGACTTGTG+AGG - Chr4:46265970-46265989 None:intergenic 45.0%
! ATGAATCTACAGAGAAGCGC+AGG - Chr4:46263544-46263563 None:intergenic 45.0%
! ATGGGTTAAGGAGGAAGACA+TGG + Chr4:46263925-46263944 MsG0480020689.01.T01:five_prime_UTR 45.0%
! ATGTGGCTCATGCTCTAGAT+TGG + Chr4:46264097-46264116 MsG0480020689.01.T01:intron 45.0%
! ATTTCGAGCACTGCAAACGA+TGG - Chr4:46270112-46270131 None:intergenic 45.0%
! CCATTCAAGATGGATTCACG+TGG + Chr4:46269570-46269589 MsG0480020689.01.T01:CDS 45.0%
! CGTTAGGATTTGCTTGTTCC+TGG - Chr4:46270402-46270421 None:intergenic 45.0%
! GAAAAGAGAAACGGGTTTGG+AGG - Chr4:46267025-46267044 None:intergenic 45.0%
! GATGGATTCACGTGGTTCAT+GGG + Chr4:46269578-46269597 MsG0480020689.01.T01:CDS 45.0%
! GGGTTTGGAGGTTTGTTTCT+TGG - Chr4:46267013-46267032 None:intergenic 45.0%
! GTTCTTTTCAGCTTCTGGGT+AGG - Chr4:46267172-46267191 None:intergenic 45.0%
! TACTCAGCTGCGCATAGTTT+TGG + Chr4:46270960-46270979 MsG0480020689.01.T01:CDS 45.0%
! TGACCCCTGAAGTGTTTACA+AGG + Chr4:46263728-46263747 MsG0480020689.01.T01:five_prime_UTR 45.0%
! TGCTTTTGCTTCAGCAGGAA+TGG + Chr4:46262956-46262975 MsG0480020689.01.T01:five_prime_UTR 45.0%
! TTTTGGTACTTGTGGACCAG+GGG - Chr4:46266418-46266437 None:intergenic 45.0%
!! GGCTTTTCAGGAGCTAATGA+AGG + Chr4:46269600-46269619 MsG0480020689.01.T01:CDS 45.0%
!! GTCAAGGACAGTGCTTTTTG+AGG + Chr4:46268908-46268927 MsG0480020689.01.T01:intron 45.0%
!! GTGGTTGAAAGTGCCATCAA+TGG - Chr4:46266956-46266975 None:intergenic 45.0%
!! TGTGGTGAAAGTGGCTTTGT+TGG - Chr4:46263112-46263131 None:intergenic 45.0%
!! TTTCCTACCTTGGTGTCTCA+GGG + Chr4:46268082-46268101 MsG0480020689.01.T01:CDS 45.0%
!!! GTTGGTTTTTGCAGGAAGGA+AGG + Chr4:46267918-46267937 MsG0480020689.01.T01:intron 45.0%
!! TGATTAAAAATTAATTAAAT+TGG - Chr4:46268982-46269001 None:intergenic 5.0%
AAGTTGTCTGGCAACCTGAG+CGG + Chr4:46263618-46263637 MsG0480020689.01.T01:five_prime_UTR 50.0%
AATCCCTGAGACACCAAGGT+AGG - Chr4:46268088-46268107 None:intergenic 50.0%
AATCTTACTTGCCACCAGGC+AGG - Chr4:46270159-46270178 None:intergenic 50.0%
ACACAACTGTTGCACCAGTC+AGG - Chr4:46270912-46270931 None:intergenic 50.0%
AGAAATTGGCTGAGGCGACA+CGG + Chr4:46270623-46270642 MsG0480020689.01.T01:CDS 50.0%
AGCGTTTCTCACCCTTCCAT+TGG + Chr4:46263877-46263896 MsG0480020689.01.T01:five_prime_UTR 50.0%
AGGTTGTACTGTGATCCCTC+AGG + Chr4:46268000-46268019 MsG0480020689.01.T01:CDS 50.0%
ATGCGCAGCTGAGTATCTGA+TGG - Chr4:46270955-46270974 None:intergenic 50.0%
ATGTTCACCGTCGCAAACTC+TGG - Chr4:46268504-46268523 None:intergenic 50.0%
CAGAAATGCAGACCCGGAAA+TGG + Chr4:46265073-46265092 MsG0480020689.01.T01:exon 50.0%
CAGTGGGAACAACCAAACCA+TGG - Chr4:46266307-46266326 None:intergenic 50.0%
CATGACAGATGATGTCCCAG+CGG + Chr4:46269119-46269138 MsG0480020689.01.T01:intron 50.0%
CCACCCTTCCATTGGGATTA+AGG + Chr4:46264567-46264586 MsG0480020689.01.T01:intron 50.0%
CCACTCCATAGGTTACAGGA+AGG + Chr4:46269526-46269545 MsG0480020689.01.T01:intron 50.0%
CCCGTATGTCGGTAAATCTC+AGG - Chr4:46264437-46264456 None:intergenic 50.0%
CCTTAATCCCAATGGAAGGG+TGG - Chr4:46264570-46264589 None:intergenic 50.0%
CCTTCCTGTAACCTATGGAG+TGG - Chr4:46269529-46269548 None:intergenic 50.0%
CTGAGCCCAGCTCATAACAA+AGG - Chr4:46264330-46264349 None:intergenic 50.0%
CTGGGACATCATCTGTCATG+GGG - Chr4:46269119-46269138 None:intergenic 50.0%
GACAAAGGAGCAAGACGATG+AGG - Chr4:46267384-46267403 None:intergenic 50.0%
GATCTGCAGAAATGCAGACC+CGG + Chr4:46265067-46265086 MsG0480020689.01.T01:exon 50.0%
GCTGGGACATCATCTGTCAT+GGG - Chr4:46269120-46269139 None:intergenic 50.0%
GCTTAGGTGGTGCCTACAAT+GGG + Chr4:46263907-46263926 MsG0480020689.01.T01:five_prime_UTR 50.0%
GGGAAAAATGCTGTGGCATG+TGG + Chr4:46264080-46264099 MsG0480020689.01.T01:intron 50.0%
GGGTCTGCATTTCTGCAGAT+CGG - Chr4:46265068-46265087 None:intergenic 50.0%
GGTCCTCGAAATGTAGCTTG+TGG - Chr4:46263130-46263149 None:intergenic 50.0%
GTCGGTAAATCTCAGGGCAA+AGG - Chr4:46264430-46264449 None:intergenic 50.0%
GTTGTGGCTGATGCTCTAGT+TGG + Chr4:46264766-46264785 MsG0480020689.01.T01:intron 50.0%
TCACACCAATTCATGGCCAG+AGG - Chr4:46264301-46264320 None:intergenic 50.0%
TCACGACCCAGAAGCTGAAA+CGG - Chr4:46267303-46267322 None:intergenic 50.0%
TCTTGCCGAACCATTCAGGT+TGG - Chr4:46270655-46270674 None:intergenic 50.0%
TGAAACGGCGTAGGCAAACT+AGG - Chr4:46267288-46267307 None:intergenic 50.0%
TGAAAGGCCAAAGGAGAGGA+TGG + Chr4:46265258-46265277 MsG0480020689.01.T01:intron 50.0%
TGGACCACATCAGCATCACT+TGG - Chr4:46268730-46268749 None:intergenic 50.0%
TGGATGATTGCGGCATCATG+TGG + Chr4:46269857-46269876 MsG0480020689.01.T01:intron 50.0%
TGTCTCAGGTGGTTCCTAGA+TGG + Chr4:46270435-46270454 MsG0480020689.01.T01:intron 50.0%
TGTGACCTCTGGCCATGAAT+TGG + Chr4:46264293-46264312 MsG0480020689.01.T01:intron 50.0%
TGTGTGAAAGGCCAAAGGAG+AGG + Chr4:46265254-46265273 MsG0480020689.01.T01:intron 50.0%
TTAGAAAGGGCTCCCTATGG+AGG - Chr4:46269185-46269204 None:intergenic 50.0%
TTCCGATCAGTGCCTCCATA+GGG + Chr4:46269170-46269189 MsG0480020689.01.T01:intron 50.0%
TTTCCGATCAGTGCCTCCAT+AGG + Chr4:46269169-46269188 MsG0480020689.01.T01:intron 50.0%
! ATCATCTGTCATGGGGTGCT+AGG - Chr4:46269112-46269131 None:intergenic 50.0%
! CTCCTAGAGCTTGTGCTACT+AGG + Chr4:46268059-46268078 MsG0480020689.01.T01:CDS 50.0%
! CTTTGTTATGAGCTGGGCTC+AGG + Chr4:46264328-46264347 MsG0480020689.01.T01:intron 50.0%
! GATGCTCTAGTTGGTGTAGC+AGG + Chr4:46264775-46264794 MsG0480020689.01.T01:intron 50.0%
! GCAATTGGGTAGCGGTTCTT+TGG + Chr4:46264508-46264527 MsG0480020689.01.T01:intron 50.0%
! GTTGTGTTTTGCGCGACTTC+TGG + Chr4:46270925-46270944 MsG0480020689.01.T01:CDS 50.0%
!! ATTTCTGGTCACCAACCACG+GGG - Chr4:46270035-46270054 None:intergenic 50.0%
!! CATTTCTGGTCACCAACCAC+GGG - Chr4:46270036-46270055 None:intergenic 50.0%
!! CCATTTCTGGTCACCAACCA+CGG - Chr4:46270037-46270056 None:intergenic 50.0%
!! CGTGGTTGGTGACCAGAAAT+GGG + Chr4:46270035-46270054 MsG0480020689.01.T01:CDS 50.0%
!! GTGCCTACAATGGGTTAAGG+AGG + Chr4:46263916-46263935 MsG0480020689.01.T01:five_prime_UTR 50.0%
!! GTGGTGCCTACAATGGGTTA+AGG + Chr4:46263913-46263932 MsG0480020689.01.T01:five_prime_UTR 50.0%
!! GTTTCCTACCTTGGTGTCTC+AGG + Chr4:46268081-46268100 MsG0480020689.01.T01:CDS 50.0%
!! TCACGGTAGGTCACTGATTC+TGG + Chr4:46267716-46267735 MsG0480020689.01.T01:intron 50.0%
!! TGGTCTTTTGATGGACGTGG+AGG + Chr4:46267980-46267999 MsG0480020689.01.T01:CDS 50.0%
AAGGCCAAAGGAGAGGATGG+TGG + Chr4:46265261-46265280 MsG0480020689.01.T01:intron 55.0%
ACAAAGCGATCGGCCTGTGT+TGG - Chr4:46270593-46270612 None:intergenic 55.0%
ACAGGCCGATCGCTTTGTGT+TGG + Chr4:46270595-46270614 MsG0480020689.01.T01:CDS 55.0%
ACGATGGAGCGAGTCTTACC+AGG - Chr4:46270096-46270115 None:intergenic 55.0%
ACGGCAATGGCCAACCTGAA+TGG + Chr4:46270642-46270661 MsG0480020689.01.T01:CDS 55.0%
ACTCGATACCTCCAAACCCC+TGG + Chr4:46266399-46266418 MsG0480020689.01.T01:intron 55.0%
ACTGTTGGCACCGCAAGTTG+TGG - Chr4:46265985-46266004 None:intergenic 55.0%
AGTGTCTCCCACCCTTCCAT+TGG + Chr4:46264559-46264578 MsG0480020689.01.T01:intron 55.0%
AGTTGCCTTGTGGACACGTC+AGG - Chr4:46264389-46264408 None:intergenic 55.0%
ATCCCTCAGGCTTCACCTGA+AGG + Chr4:46268013-46268032 MsG0480020689.01.T01:CDS 55.0%
CATTTCTGCAGATCGGACCC+GGG - Chr4:46265061-46265080 None:intergenic 55.0%
CCTACGCCGTTTCAGCTTCT+GGG + Chr4:46267294-46267313 MsG0480020689.01.T01:CDS 55.0%
CCTCACCTTCACACCAACAC+AGG + Chr4:46270577-46270596 MsG0480020689.01.T01:CDS 55.0%
CCTCCTCCTTAACCCACTGT+AGG - Chr4:46264604-46264623 None:intergenic 55.0%
CGCTGGGACATCATCTGTCA+TGG - Chr4:46269121-46269140 None:intergenic 55.0%
CGGGCCGTTACACTAGTCAA+TGG + Chr4:46262756-46262775 MsG0480020689.01.T01:five_prime_UTR 55.0%
CTCGCAGAAACCGAGAATGG+CGG + Chr4:46270530-46270549 MsG0480020689.01.T01:CDS 55.0%
CTGCTCTTGCCGAACCATTC+AGG - Chr4:46270659-46270678 None:intergenic 55.0%
GACCTTCAGGTGAAGCCTGA+GGG - Chr4:46268018-46268037 None:intergenic 55.0%
GAGCAATCCCTGAGACACCA+AGG - Chr4:46268092-46268111 None:intergenic 55.0%
GAGCTAATGAAGGGAACCCG+CGG + Chr4:46269610-46269629 MsG0480020689.01.T01:CDS 55.0%
GATACCAAACTCCCCGTGGT+TGG + Chr4:46270021-46270040 MsG0480020689.01.T01:CDS 55.0%
GATCGATACCAAACTCCCCG+TGG + Chr4:46270017-46270036 MsG0480020689.01.T01:CDS 55.0%
GCATTTCTGCAGATCGGACC+CGG - Chr4:46265062-46265081 None:intergenic 55.0%
GCCTGCATCAACCCGTATGT+CGG - Chr4:46264448-46264467 None:intergenic 55.0%
GCTTAGGTGGTGCCTACAGT+GGG + Chr4:46264589-46264608 MsG0480020689.01.T01:intron 55.0%
GGAGGGTTCCCCAAATGCTT+GGG - Chr4:46269051-46269070 None:intergenic 55.0%
GGCTTAGGTGGTGCCTACAA+TGG + Chr4:46263906-46263925 MsG0480020689.01.T01:five_prime_UTR 55.0%
GTACGGTTGAAGGCAATGGC+TGG - Chr4:46270685-46270704 None:intergenic 55.0%
GTACTTGTGGACCAGGGGTT+TGG - Chr4:46266413-46266432 None:intergenic 55.0%
GTCCAGTCTGCAGAAACCCT+TGG + Chr4:46264362-46264381 MsG0480020689.01.T01:intron 55.0%
GTCTCCACCATCCTCTCCTT+TGG - Chr4:46265268-46265287 None:intergenic 55.0%
GTGTCTCCCACCCTTCCATT+GGG + Chr4:46264560-46264579 MsG0480020689.01.T01:intron 55.0%
GTTGCCTTGTGGACACGTCA+GGG - Chr4:46264388-46264407 None:intergenic 55.0%
TCAGGCTTCACCTGAAGGTC+CGG + Chr4:46268018-46268037 MsG0480020689.01.T01:CDS 55.0%
TTCAATGTCCCCATGGCACC+TGG + Chr4:46270075-46270094 MsG0480020689.01.T01:CDS 55.0%
! AGGTGCCATGGGGACATTGA+AGG - Chr4:46270076-46270095 None:intergenic 55.0%
! ATCGGCCTGTGTTGGTGTGA+AGG - Chr4:46270585-46270604 None:intergenic 55.0%
! ATCTGTCATGGGGTGCTAGG+CGG - Chr4:46269109-46269128 None:intergenic 55.0%
! CCTGTGTTGGTGTGAAGGTG+AGG - Chr4:46270580-46270599 None:intergenic 55.0%
! CGAGTCTTACCAGGTGCCAT+GGG - Chr4:46270087-46270106 None:intergenic 55.0%
! CGCGTGCCACTGAAGGAAAT+TGG + Chr4:46265124-46265143 MsG0480020689.01.T01:CDS 55.0%
! CGTGGTTCATGGGGCTTTTC+AGG + Chr4:46269588-46269607 MsG0480020689.01.T01:CDS 55.0%
! GAGTCTTACCAGGTGCCATG+GGG - Chr4:46270086-46270105 None:intergenic 55.0%
! GTGGGTTAAGGAGGAGGACA+TGG + Chr4:46264607-46264626 MsG0480020689.01.T01:intron 55.0%
!! ACCGACATACGGGTTGATGC+AGG + Chr4:46264444-46264463 MsG0480020689.01.T01:intron 55.0%
!! CCGTGGTTGGTGACCAGAAA+TGG + Chr4:46270034-46270053 MsG0480020689.01.T01:CDS 55.0%
!! CCTACAGTGGGTTAAGGAGG+AGG + Chr4:46264601-46264620 MsG0480020689.01.T01:intron 55.0%
!! CTCCCTATGGAGGCACTGAT+CGG - Chr4:46269175-46269194 None:intergenic 55.0%
!! CTTTTAAGGAAGGGTCCCCC+AGG - Chr4:46269253-46269272 None:intergenic 55.0%
!! GGGTGGTCTTTTGATGGACG+TGG + Chr4:46267977-46267996 MsG0480020689.01.T01:CDS 55.0%
!! GTGCCTACAGTGGGTTAAGG+AGG + Chr4:46264598-46264617 MsG0480020689.01.T01:intron 55.0%
!! GTGGTGCCTACAGTGGGTTA+AGG + Chr4:46264595-46264614 MsG0480020689.01.T01:intron 55.0%
AACCTGAGCGGCTGAGCCTA+TGG + Chr4:46263630-46263649 MsG0480020689.01.T01:five_prime_UTR 60.0%
AGCTGGGCTCAGGAAAGTCC+AGG + Chr4:46264338-46264357 MsG0480020689.01.T01:intron 60.0%
AGCTGGGCTCAGGAAAGTCC+CGG + Chr4:46264338-46264357 MsG0480020689.01.T01:intron 60.0%
CATCGTAGAGAGCAGCCGCT+GGG - Chr4:46269137-46269156 None:intergenic 60.0%
CCCAGAAGCTGAAACGGCGT+AGG - Chr4:46267297-46267316 None:intergenic 60.0%
CTGGGCTCAGGAAAGTCCAG+GGG + Chr4:46264340-46264359 MsG0480020689.01.T01:intron 60.0%
CTTGTGGACCAGGGGTTTGG+AGG - Chr4:46266410-46266429 None:intergenic 60.0%
GAAGGGTCCCCCAGGTACTT+GGG - Chr4:46269245-46269264 None:intergenic 60.0%
GATCCAACAGCACGCGCTTC+CGG - Chr4:46268040-46268059 None:intergenic 60.0%
GCCTACGCCGTTTCAGCTTC+TGG + Chr4:46267293-46267312 MsG0480020689.01.T01:CDS 60.0%
GCGAGTCTTACCAGGTGCCA+TGG - Chr4:46270088-46270107 None:intergenic 60.0%
GCTGGGCTCAGGAAAGTCCA+GGG + Chr4:46264339-46264358 MsG0480020689.01.T01:intron 60.0%
GGACCTTCAGGTGAAGCCTG+AGG - Chr4:46268019-46268038 None:intergenic 60.0%
GGCCAAGGGTTTCTGCAGAC+TGG - Chr4:46264367-46264386 None:intergenic 60.0%
GGCTTAGGTGGTGCCTACAG+TGG + Chr4:46264588-46264607 MsG0480020689.01.T01:intron 60.0%
GGGAGGGTTCCCCAAATGCT+TGG - Chr4:46269052-46269071 None:intergenic 60.0%
GTCACCAACCACGGGGAGTT+TGG - Chr4:46270028-46270047 None:intergenic 60.0%
GTTTCTGCAGACTGGACCCC+TGG - Chr4:46264359-46264378 None:intergenic 60.0%
TGTGGACACGTCAGGGCCAA+GGG - Chr4:46264381-46264400 None:intergenic 60.0%
TTCTTCCAGCTCACGGTGCC+AGG + Chr4:46270132-46270151 MsG0480020689.01.T01:CDS 60.0%
TTGGCCCTGACGTGTCCACA+AGG + Chr4:46264381-46264400 MsG0480020689.01.T01:intron 60.0%
TTGTGGACACGTCAGGGCCA+AGG - Chr4:46264382-46264401 None:intergenic 60.0%
! TCTTCCAGCTCACGGTGCCA+GGG + Chr4:46270133-46270152 MsG0480020689.01.T01:CDS 60.0%
GCATCGTAGAGAGCAGCCGC+TGG - Chr4:46269138-46269157 None:intergenic 65.0%
GCTGGGCTCAGGAAAGTCCC+GGG + Chr4:46265041-46265060 MsG0480020689.01.T01:intron 65.0%
GGAAGGGTCCCCCAGGTACT+TGG - Chr4:46269246-46269265 None:intergenic 65.0%
TGCCATAGGCTCAGCCGCTC+AGG - Chr4:46263635-46263654 None:intergenic 65.0%
TGGCTGAGGCGACACGGCAA+TGG + Chr4:46270629-46270648 MsG0480020689.01.T01:CDS 65.0%
! GCTGAGACGCGTGCCACTGA+AGG + Chr4:46265117-46265136 MsG0480020689.01.T01:CDS 65.0%
! TGTCATGGGGTGCTAGGCGG+AGG - Chr4:46269106-46269125 None:intergenic 65.0%
ACTTGCCACCAGGCAGGCCC+TGG - Chr4:46270153-46270172 None:intergenic 70.0%
GCACGCGCTTCCGGACCTTC+AGG - Chr4:46268031-46268050 None:intergenic 70.0%
! GGTCCGGAAGCGCGTGCTGT+TGG + Chr4:46268034-46268053 MsG0480020689.01.T01:CDS 70.0%
CAGGCCCTGGCACCGTGAGC+TGG - Chr4:46270140-46270159 None:intergenic 75.0%
! TCACGGTGCCAGGGCCTGCC+TGG + Chr4:46270142-46270161 MsG0480020689.01.T01:CDS 75.0%
!! CGGTGCCAGGGCCTGCCTGG+TGG + Chr4:46270145-46270164 MsG0480020689.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 46262756 46271274 46262756 ID=MsG0480020689.01;Name=MsG0480020689.01
Chr4 mRNA 46262756 46271274 46262756 ID=MsG0480020689.01.T01;Parent=MsG0480020689.01;Name=MsG0480020689.01.T01;_AED=0.43;_eAED=0.43;_QI=1181|0.66|0.6|0.8|0.77|0.7|10|194|604
Chr4 exon 46262756 46263770 46262756 ID=MsG0480020689.01.T01:exon:7875;Parent=MsG0480020689.01.T01
Chr4 exon 46263826 46263965 46263826 ID=MsG0480020689.01.T01:exon:7876;Parent=MsG0480020689.01.T01
Chr4 exon 46265052 46265159 46265052 ID=MsG0480020689.01.T01:exon:7877;Parent=MsG0480020689.01.T01
Chr4 exon 46266863 46267404 46266863 ID=MsG0480020689.01.T01:exon:7878;Parent=MsG0480020689.01.T01
Chr4 exon 46267932 46268167 46267932 ID=MsG0480020689.01.T01:exon:7879;Parent=MsG0480020689.01.T01
Chr4 exon 46268479 46268605 46268479 ID=MsG0480020689.01.T01:exon:7880;Parent=MsG0480020689.01.T01
Chr4 exon 46269537 46269673 46269537 ID=MsG0480020689.01.T01:exon:7881;Parent=MsG0480020689.01.T01
Chr4 exon 46270011 46270170 46270011 ID=MsG0480020689.01.T01:exon:7882;Parent=MsG0480020689.01.T01
Chr4 exon 46270443 46270718 46270443 ID=MsG0480020689.01.T01:exon:7883;Parent=MsG0480020689.01.T01
Chr4 exon 46270826 46271274 46270826 ID=MsG0480020689.01.T01:exon:7884;Parent=MsG0480020689.01.T01
Chr4 five_prime_UTR 46262756 46263770 46262756 ID=MsG0480020689.01.T01:five_prime_utr;Parent=MsG0480020689.01.T01
Chr4 five_prime_UTR 46263826 46263965 46263826 ID=MsG0480020689.01.T01:five_prime_utr;Parent=MsG0480020689.01.T01
Chr4 five_prime_UTR 46265052 46265077 46265052 ID=MsG0480020689.01.T01:five_prime_utr;Parent=MsG0480020689.01.T01
Chr4 CDS 46265078 46265159 46265078 ID=MsG0480020689.01.T01:cds;Parent=MsG0480020689.01.T01
Chr4 CDS 46266863 46267404 46266863 ID=MsG0480020689.01.T01:cds;Parent=MsG0480020689.01.T01
Chr4 CDS 46267932 46268167 46267932 ID=MsG0480020689.01.T01:cds;Parent=MsG0480020689.01.T01
Chr4 CDS 46268479 46268605 46268479 ID=MsG0480020689.01.T01:cds;Parent=MsG0480020689.01.T01
Chr4 CDS 46269537 46269673 46269537 ID=MsG0480020689.01.T01:cds;Parent=MsG0480020689.01.T01
Chr4 CDS 46270011 46270170 46270011 ID=MsG0480020689.01.T01:cds;Parent=MsG0480020689.01.T01
Chr4 CDS 46270443 46270718 46270443 ID=MsG0480020689.01.T01:cds;Parent=MsG0480020689.01.T01
Chr4 CDS 46270826 46271080 46270826 ID=MsG0480020689.01.T01:cds;Parent=MsG0480020689.01.T01
Chr4 three_prime_UTR 46271081 46271274 46271081 ID=MsG0480020689.01.T01:three_prime_utr;Parent=MsG0480020689.01.T01
Chr4 mRNA 46262819 46263381 46262819 ID=MsG0480020689.01.T02;Parent=MsG0480020689.01;Name=MsG0480020689.01.T02;_AED=0.48;_eAED=0.48;_QI=96|1|1|1|1|1|2|171|69
Chr4 exon 46262819 46262997 46262819 ID=MsG0480020689.01.T02:exon:7885;Parent=MsG0480020689.01.T02
Chr4 exon 46263084 46263381 46263084 ID=MsG0480020689.01.T02:exon:7886;Parent=MsG0480020689.01.T02
Chr4 five_prime_UTR 46262819 46262914 46262819 ID=MsG0480020689.01.T02:five_prime_utr;Parent=MsG0480020689.01.T02
Chr4 CDS 46262915 46262997 46262915 ID=MsG0480020689.01.T02:cds;Parent=MsG0480020689.01.T02
Chr4 CDS 46263084 46263210 46263084 ID=MsG0480020689.01.T02:cds;Parent=MsG0480020689.01.T02
Chr4 three_prime_UTR 46263211 46263381 46263211 ID=MsG0480020689.01.T02:three_prime_utr;Parent=MsG0480020689.01.T02
Gene Sequence

>MsG0480020689.01.T02

ATGTCACGAAGACGAAATTTAGTAGTTGCTGCTGGATTACTTGCTTTTGCTTCAGCAGGAATGGCTTTTCCTTTCTACATGGCTTCGTCGAAGAAACCGGTAATTGATCCAACAAAGCCACTTTCACCACAAGCTACATTTCGAGGACCTTATATTAATACTGGGTCACGTGATATTGGTCCTGATTATGAAACTTATAAGAAGAAGTGA

>MsG0480020689.01.T01

ATGCAGACCCGGAAATGGTTAAATGCTTCATTCTTGGGGGCTGAGACGCGTGCCACTGAAGGAAATTGGCTGAATATGTACGAAACTTGCACGTCTCAAACAATTCTTGTTCTTATATATAAATTTCTTCCATTGTTAAAAAACTCAAAACTTCAAACAAACAAAAAAAGCACCATTGATGGCACTTTCAACCACACTTTCATCTTTAGCAACATTTTCATCATCATCACCAAGAAACAAACCTCCAAACCCGTTTCTCTTTTCATCCTTCACAAAAAGTCACAATTTTTAACAAATTCAACAAGACCCAGAAACAGAAACAGGAGAAACCTTTTAGTAACAGTTAGAAGTGTTGCAGCACCACCTACAAAAACTGAACAAAATCAATCCTACCCAGAAGCTGAAAAGAACGAAATTGATGAAGAATTTGAAGATGAAAGTTCTTCATCGAAGTTTTCATGGAGAGATCATTGGTACCCAGTTTCTTTGATTGAAGATCTGGATCCTAGTTTGCCTACGCCGTTTCAGCTTCTGGGTCGTGAAATTGTGCTTTGGTTTGATAAGGCTAATTCTCAATGGGTTGCTTTTGATGATAAATGTCCTCATCGTCTTGCTCCTTTGTCCGAAGGAAGGATTGATGAACGTGGAAACTTGCAGTGTTCTTATCATGGGTGGTCTTTTGATGGACGTGGAGGTTGTACTGTGATCCCTCAGGCTTCACCTGAAGGTCCGGAAGCGCGTGCTGTTGGATCTCCTAGAGCTTGTGCTACTAGGTTTCCTACCTTGGTGTCTCAGGGATTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCAAATGCATCTAAACCTCCAATGTTGCCTGATGACTTTGTAAAACCAGAGTTTGCGACGGTGAACATTCAGCGTGATCTTTTCTACGGCTATGATACTCTCATGGAGAATGTTTCTGATCCTTCTCACATTGATTTTGCTCATCACAAGGTTACAGGAAGGAGAGACAGAGCCAAGCCTCTTCCATTCAAGATGGATTCACGTGGTTCATGGGGCTTTTCAGGAGCTAATGAAGGGAACCCGCGGATCAGTTCCAAATTTATTGCACCATGTTATTATATTAACAAGATTGAGATCGATACCAAACTCCCCGTGGTTGGTGACCAGAAATGGGTAATATGGATATGTTCCTTCAATGTCCCCATGGCACCTGGTAAGACTCGCTCCATCGTTTGCAGTGCTCGAAATTTCTTCCAGCTCACGGTGCCAGGGCCTGCCTGGTGGCAAGTGGTTCCTAGATGGTATGAACATTGGACTTCAAACAAGGTATATGACGGTGACATGATTGTACTTCAAGGTCAAGAGAAAATCTTTCTCGCAGAAACCGAGAATGGCGGTGACATTAACAAACAGTACACAAGCCTCACCTTCACACCAACACAGGCCGATCGCTTTGTGTTGGCATTTAGAAATTGGCTGAGGCGACACGGCAATGGCCAACCTGAATGGTTCGGCAAGAGCAGCAGCCAGCCATTGCCTTCAACCGTACTATCAAAACGTCAGATGTTGGATAGATTTGAACAGCACACACTAAAGTGTTCAGCTTGTAAAGGAGCTTATGAGGGATTCCAAACATGGCAGAAAATCCTGACTGGTGCAACAGTTGTGTTTTGCGCGACTTCTGGTATTCCATCAGATACTCAGCTGCGCATAGTTTTGGCTGCACTTGCGCTTGTCAGCGCAGCCTTAGCTTTTTCCATAAACCAACTAAAAAACAATTTTGTTTTCGTCGATTACGTGCACGCTGAAATCGATTAA
Protein sequence

>MsG0480020689.01.T02

MSRRRNLVVAAGLLAFASAGMAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDIGPDYETYKKK*

>MsG0480020689.01.T01

MQTRKWLNASFLGAETRATEGNWLNMYETCTSQTILVLIYKFLPLLKNSKLQTNKKSTIDGTFNHTFIFSNIFIIITKKQTSKPVSLFILHKKSQFLTNSTRPRNRNRRNLLVTVRSVAAPPTKTEQNQSYPEAEKNEIDEEFEDESSSSKFSWRDHWYPVSLIEDLDPSLPTPFQLLGREIVLWFDKANSQWVAFDDKCPHRLAPLSEGRIDERGNLQCSYHGWSFDGRGGCTVIPQASPEGPEARAVGSPRACATRFPTLVSQGLLFVWPDENGWEKANASKPPMLPDDFVKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMDSRGSWGFSGANEGNPRISSKFIAPCYYINKIEIDTKLPVVGDQKWVIWICSFNVPMAPGKTRSIVCSARNFFQLTVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLAETENGGDINKQYTSLTFTPTQADRFVLAFRNWLRRHGNGQPEWFGKSSSQPLPSTVLSKRQMLDRFEQHTLKCSACKGAYEGFQTWQKILTGATVVFCATSGIPSDTQLRIVLAALALVSAALAFSINQLKNNFVFVDYVHAEID*