Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0042790 | sp|Q9C999|PILS2_ARATH | 67.035 | 452 | 140 | 2 | 49 | 500 | 5 | 447 | 0.0 | 606 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021980 | Msa0042790 | 0.825511 | 4.503617e-54 | -8.615850e-47 |
| Msa0026120 | Msa0042790 | 0.802345 | 5.862276e-49 | -8.615850e-47 |
| Msa0036990 | Msa0042790 | 0.823347 | 1.454348e-53 | -8.615850e-47 |
| Msa0042790 | Msa0053960 | 0.823157 | 1.611229e-53 | -8.615850e-47 |
| Msa0042790 | Msa0070090 | 0.801438 | 9.002395e-49 | -8.615850e-47 |
| Msa0042790 | Msa0089710 | 0.856490 | 3.106095e-62 | -8.615850e-47 |
| Msa0042790 | Msa0096020 | 0.821196 | 4.592292e-53 | -8.615850e-47 |
| Msa0042790 | Msa0117300 | 0.808933 | 2.427159e-50 | -8.615850e-47 |
| Msa0042790 | Msa0131090 | 0.822077 | 2.872945e-53 | -8.615850e-47 |
| Msa0042790 | Msa0148430 | 0.818778 | 1.641349e-52 | -8.615850e-47 |
| Msa0042790 | Msa0160650 | 0.823575 | 1.286744e-53 | -8.615850e-47 |
| Msa0042790 | Msa0166580 | 0.806481 | 8.057123e-50 | -8.615850e-47 |
| Msa0042790 | Msa0173370 | 0.803715 | 3.054138e-49 | -8.615850e-47 |
| Msa0042790 | Msa0178700 | 0.956242 | 4.680664e-114 | -8.615850e-47 |
| Msa0042790 | Msa0218430 | 0.803862 | 2.847282e-49 | -8.615850e-47 |
| Msa0042790 | Msa0317360 | 0.804736 | 1.871772e-49 | -8.615850e-47 |
| Msa0042790 | Msa0372990 | 0.830519 | 2.805892e-55 | -8.615850e-47 |
| Msa0042790 | Msa0378670 | 0.803523 | 3.347701e-49 | -8.615850e-47 |
| Msa0042790 | Msa0378700 | 0.805037 | 1.619501e-49 | -8.615850e-47 |
| Msa0042790 | Msa0388370 | 0.869844 | 2.283863e-66 | -8.615850e-47 |
| Msa0042790 | Msa0421390 | 0.806942 | 6.437965e-50 | -8.615850e-47 |
| Msa0042790 | Msa0429130 | 0.802058 | 6.717813e-49 | -8.615850e-47 |
| Msa0042790 | Msa0431940 | 0.842968 | 1.870110e-58 | -8.615850e-47 |
| Msa0042790 | Msa0501350 | 0.806799 | 6.901998e-50 | -8.615850e-47 |
| Msa0042790 | Msa0520810 | 0.834577 | 2.765814e-56 | -8.615850e-47 |
| Msa0042790 | Msa0554440 | 0.809943 | 1.474027e-50 | -8.615850e-47 |
| Msa0042790 | Msa0555510 | 0.809777 | 1.600148e-50 | -8.615850e-47 |
| Msa0042790 | Msa0580540 | 0.801769 | 7.701398e-49 | -8.615850e-47 |
| Msa0042790 | Msa0607620 | 0.803098 | 4.098767e-49 | -8.615850e-47 |
| Msa0042790 | Msa0608940 | 0.807259 | 5.517309e-50 | -8.615850e-47 |
| Msa0042790 | Msa0648200 | 0.813550 | 2.418276e-51 | -8.615850e-47 |
| Msa0042790 | Msa0648300 | 0.803113 | 4.069406e-49 | -8.615850e-47 |
| Msa0042790 | Msa0649530 | 0.801270 | 9.745553e-49 | -8.615850e-47 |
| Msa0042790 | Msa0664130 | 0.803579 | 3.259384e-49 | -8.615850e-47 |
| Msa0042790 | Msa0713530 | 0.809530 | 1.808472e-50 | -8.615850e-47 |
| Msa0042790 | Msa0718920 | 0.803068 | 4.158183e-49 | -8.615850e-47 |
| Msa0042790 | Msa0748980 | 0.818394 | 2.005398e-52 | -8.615850e-47 |
| Msa0042790 | Msa0752830 | 0.808536 | 2.950952e-50 | -8.615850e-47 |
| Msa0042790 | Msa0755590 | 0.802928 | 4.444945e-49 | -8.615850e-47 |
| Msa0042790 | Msa0825520 | 0.816929 | 4.291118e-52 | -8.615850e-47 |
| Msa0042790 | Msa0835010 | 0.809424 | 1.905568e-50 | -8.615850e-47 |
| Msa0042790 | Msa0835550 | 0.811817 | 5.790142e-51 | -8.615850e-47 |
| Msa0042790 | Msa0864730 | 0.818208 | 2.209833e-52 | -8.615850e-47 |
| Msa0042790 | Msa0864750 | 0.816833 | 4.510219e-52 | -8.615850e-47 |
| Msa0042790 | Msa0927890 | 0.810038 | 1.405850e-50 | -8.615850e-47 |
| Msa0042790 | Msa0968240 | 0.801802 | 7.583033e-49 | -8.615850e-47 |
| Msa0042790 | Msa0984860 | 0.815874 | 7.391314e-52 | -8.615850e-47 |
| Msa0042790 | Msa0998940 | 0.803117 | 4.062925e-49 | -8.615850e-47 |
| Msa0042790 | Msa0999590 | 0.815195 | 1.046937e-51 | -8.615850e-47 |
| Msa0042790 | Msa1008960 | 0.807686 | 4.478651e-50 | -8.615850e-47 |
| Msa0042790 | Msa1026430 | 0.812155 | 4.887164e-51 | -8.615850e-47 |
| Msa0042790 | Msa1031220 | 0.812535 | 4.037934e-51 | -8.615850e-47 |
| Msa0042790 | Msa1044450 | 0.801650 | 8.145150e-49 | -8.615850e-47 |
| Msa0042790 | Msa1050320 | 0.802520 | 5.395806e-49 | -8.615850e-47 |
| Msa0042790 | Msa1052030 | 0.806204 | 9.212864e-50 | -8.615850e-47 |
| Msa0042790 | Msa1089130 | 0.830422 | 2.962799e-55 | -8.615850e-47 |
| Msa0042790 | Msa1113210 | 0.801136 | 1.038119e-48 | -8.615850e-47 |
| Msa0042790 | Msa1203840 | 0.803472 | 3.429844e-49 | -8.615850e-47 |
| Msa0042790 | Msa1203860 | 0.803678 | 3.108884e-49 | -8.615850e-47 |
| Msa0042790 | Msa1207760 | 0.820977 | 5.155991e-53 | -8.615850e-47 |
| Msa0042790 | Msa1279320 | 0.821117 | 4.788051e-53 | -8.615850e-47 |
| Msa0042790 | Msa1356730 | 0.816289 | 5.969985e-52 | -8.615850e-47 |
| Msa0042790 | Msa1368660 | 0.839935 | 1.176433e-57 | -8.615850e-47 |
| Msa0042790 | Msa1384620 | 0.818920 | 1.523466e-52 | -8.615850e-47 |
| Msa0042790 | Msa1403950 | 0.816566 | 5.177331e-52 | -8.615850e-47 |
| Msa0042790 | Msa1446220 | 0.820952 | 5.226854e-53 | -8.615850e-47 |
| Msa0042790 | Msa1459630 | 0.832886 | 7.318533e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0042790 | MtrunA17_Chr1g0208491 | 98.056 | 463 | 6 | 1 | 42 | 504 | 1 | 460 | 0.0 | 920 |
| Msa0042790 | MtrunA17_Chr5g0422801 | 76.242 | 463 | 100 | 3 | 42 | 504 | 1 | 453 | 0.0 | 701 |
| Msa0042790 | MtrunA17_Chr7g0245351 | 38.745 | 462 | 231 | 5 | 43 | 501 | 9 | 421 | 5.99e-107 | 325 |
| Msa0042790 | MtrunA17_Chr5g0407621 | 28.140 | 430 | 273 | 6 | 66 | 493 | 13 | 408 | 3.42e-56 | 193 |
| Msa0042790 | MtrunA17_Chr5g0407331 | 28.864 | 440 | 272 | 10 | 60 | 493 | 7 | 411 | 8.11e-55 | 189 |
| Msa0042790 | MtrunA17_Chr8g0369961 | 28.868 | 433 | 253 | 9 | 66 | 493 | 13 | 395 | 1.30e-53 | 186 |
| Msa0042790 | MtrunA17_Chr5g0407321 | 27.517 | 447 | 289 | 9 | 60 | 503 | 7 | 421 | 6.27e-52 | 182 |
| Msa0042790 | MtrunA17_Chr8g0335261 | 25.508 | 443 | 289 | 7 | 63 | 501 | 10 | 415 | 1.75e-44 | 161 |
| Msa0042790 | MtrunA17_Chr8g0335271 | 28.604 | 437 | 261 | 9 | 63 | 493 | 10 | 401 | 1.13e-40 | 151 |
| Msa0042790 | MtrunA17_Chr5g0407271 | 24.256 | 437 | 238 | 9 | 60 | 493 | 7 | 353 | 5.71e-32 | 126 |
| Msa0042790 | MtrunA17_Chr8g0370221 | 26.269 | 335 | 190 | 8 | 170 | 493 | 2 | 290 | 1.53e-29 | 117 |
| Msa0042790 | MtrunA17_Chr5g0407281 | 31.548 | 168 | 114 | 1 | 336 | 503 | 9 | 175 | 2.53e-22 | 94.0 |
| Msa0042790 | MtrunA17_Chr5g0407291 | 28.750 | 160 | 111 | 2 | 60 | 216 | 7 | 166 | 3.20e-19 | 85.1 |
| Msa0042790 | MtrunA17_Chr8g0370211 | 33.333 | 102 | 67 | 1 | 55 | 155 | 2 | 103 | 6.99e-15 | 71.6 |
| Msa0042790 | MtrunA17_Chr5g0407611 | 38.384 | 99 | 60 | 1 | 395 | 493 | 33 | 130 | 1.18e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0042790 | AT1G71090.1 | 67.035 | 452 | 140 | 2 | 49 | 500 | 5 | 447 | 0.0 | 606 |
| Msa0042790 | AT5G01990.1 | 39.775 | 445 | 223 | 9 | 60 | 501 | 28 | 430 | 2.10e-107 | 327 |
| Msa0042790 | AT1G76520.1 | 29.724 | 434 | 241 | 9 | 62 | 493 | 10 | 381 | 5.13e-59 | 200 |
| Msa0042790 | AT1G76520.2 | 29.724 | 434 | 241 | 9 | 62 | 493 | 10 | 381 | 5.13e-59 | 200 |
| Msa0042790 | AT2G17500.2 | 26.682 | 446 | 266 | 5 | 60 | 501 | 7 | 395 | 1.11e-55 | 191 |
| Msa0042790 | AT2G17500.1 | 26.682 | 446 | 266 | 5 | 60 | 501 | 7 | 395 | 1.11e-55 | 191 |
| Msa0042790 | AT2G17500.3 | 26.682 | 446 | 266 | 5 | 60 | 501 | 7 | 395 | 1.11e-55 | 191 |
| Msa0042790 | AT2G17500.4 | 26.682 | 446 | 266 | 5 | 60 | 501 | 7 | 395 | 1.11e-55 | 191 |
| Msa0042790 | AT5G65980.1 | 25.721 | 451 | 269 | 7 | 58 | 502 | 5 | 395 | 9.66e-54 | 186 |
| Msa0042790 | AT5G65980.2 | 26.225 | 408 | 235 | 7 | 58 | 459 | 5 | 352 | 7.19e-48 | 170 |
| Msa0042790 | AT1G20925.1 | 37.209 | 172 | 107 | 1 | 322 | 493 | 293 | 463 | 5.59e-28 | 117 |
| Msa0042790 | AT1G20925.1 | 33.758 | 157 | 102 | 1 | 66 | 220 | 101 | 257 | 2.10e-24 | 106 |
| Msa0042790 | AT1G76530.3 | 35.333 | 150 | 95 | 1 | 65 | 212 | 12 | 161 | 2.25e-21 | 95.5 |
| Msa0042790 | AT1G76530.2 | 35.333 | 150 | 95 | 1 | 65 | 212 | 12 | 161 | 6.28e-21 | 95.5 |
| Msa0042790 | AT1G76530.2 | 36.913 | 149 | 88 | 3 | 350 | 493 | 259 | 406 | 3.71e-17 | 84.0 |
| Msa0042790 | AT1G76530.1 | 35.333 | 150 | 95 | 1 | 65 | 212 | 12 | 161 | 6.28e-21 | 95.5 |
| Msa0042790 | AT1G76530.1 | 36.913 | 149 | 88 | 3 | 350 | 493 | 259 | 406 | 3.71e-17 | 84.0 |
Find 77 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAGATAGTTTGGAAATTT+TGG | 0.137457 | 1_1:+73722120 | Msa0042790:CDS |
| CCTGATTTCGATTCATTATC+AGG | 0.203290 | 1_1:+73721872 | Msa0042790:CDS |
| CCTTGTGTAATGCTTATATT+AGG | 0.218422 | 1_1:+73722157 | Msa0042790:CDS |
| CTTAAAGATTCTAGCAATAA+AGG | 0.231812 | 1_1:-73721813 | None:intergenic |
| CTTGTTGTGCTTCCTGTTAT+AGG | 0.233061 | 1_1:+73722253 | Msa0042790:CDS |
| CATACTCAAAATACTCCTTT+TGG | 0.244311 | 1_1:+73721545 | Msa0042790:CDS |
| AAGCTTCAGCAGTTCTATTC+TGG | 0.253211 | 1_1:+73722422 | Msa0042790:CDS |
| TTAGGAATTAATTTCATTCT+TGG | 0.273011 | 1_1:-73721248 | None:intergenic |
| ACAATCATAATGACAGGATT+TGG | 0.274474 | 1_1:+73721479 | Msa0042790:CDS |
| GTGCTTCCTGTTATAGGAAT+TGG | 0.292331 | 1_1:+73722259 | Msa0042790:CDS |
| AACCAAGTTCACTAAATATT+AGG | 0.305263 | 1_1:-73721322 | None:intergenic |
| CTTGGAATTAAAACTACAAT+TGG | 0.314458 | 1_1:+73722214 | Msa0042790:CDS |
| TGCTTCCTGTTATAGGAATT+GGG | 0.320264 | 1_1:+73722260 | Msa0042790:CDS |
| AAAATAATCATATGTCTATT+AGG | 0.320538 | 1_1:+73721927 | Msa0042790:CDS |
| AGGAGTTTAAATGTGGCTTT+AGG | 0.328503 | 1_1:-73721266 | None:intergenic |
| TCTTTGTTGGCTATTATCAT+TGG | 0.349134 | 1_1:+73722040 | Msa0042790:CDS |
| CTTGTGTAATGCTTATATTA+GGG | 0.353196 | 1_1:+73722158 | Msa0042790:CDS |
| GTTTCTTTATCTTCAATTCC+AGG | 0.358521 | 1_1:-73721773 | None:intergenic |
| ATTCATATATAGTAATATTC+AGG | 0.358816 | 1_1:+73720907 | Msa0042790:CDS |
| CTTATGTTTCTTTATCTCAA+TGG | 0.364572 | 1_1:+73721594 | Msa0042790:CDS |
| TCATATGTCTATTAGGTGTT+TGG | 0.365120 | 1_1:+73721934 | Msa0042790:CDS |
| ATTCCAAGTGTTGACTCATT+TGG | 0.365792 | 1_1:-73722199 | None:intergenic |
| TAGGAATTAATTTCATTCTT+GGG | 0.365940 | 1_1:-73721247 | None:intergenic |
| TGGCTGAGCCTAGAGTTGTT+AGG | 0.375993 | 1_1:+73721954 | Msa0042790:CDS |
| ACCAACAATTGCATCTTTGT+TGG | 0.380059 | 1_1:+73722027 | Msa0042790:CDS |
| GGTTGAAGTATGTGATGAAT+TGG | 0.402240 | 1_1:-73722004 | None:intergenic |
| GAAATCAGGATCAGGAATAA+TGG | 0.402945 | 1_1:-73721858 | None:intergenic |
| CGCAACAAAGACTAAAACTA+AGG | 0.406647 | 1_1:-73720881 | None:intergenic |
| ACAATCCCAATTCCTATAAC+AGG | 0.408237 | 1_1:-73722265 | None:intergenic |
| AATCTTCTCATTGCTGTAGT+TGG | 0.414891 | 1_1:+73721512 | Msa0042790:CDS |
| GGGAGCAATTGCTAGCTTGA+GGG | 0.420113 | 1_1:+73722384 | Msa0042790:CDS |
| GTACTAAGAAGCACATTAAC+TGG | 0.420568 | 1_1:-73721386 | None:intergenic |
| GTGAATCTATTAAACCTTTG+AGG | 0.420872 | 1_1:-73721458 | None:intergenic |
| TTAAAGATTCTAGCAATAAA+GGG | 0.426630 | 1_1:-73721812 | None:intergenic |
| TGCCTAATATTTAGTGAACT+TGG | 0.428326 | 1_1:+73721320 | Msa0042790:CDS |
| CCTGATAATGAATCGAAATC+AGG | 0.429636 | 1_1:-73721872 | None:intergenic |
| TTAATCTGCCTTACACTCAT+AGG | 0.446570 | 1_1:+73721209 | Msa0042790:CDS |
| TACAGCAATGAGAAGATTAC+CGG | 0.449081 | 1_1:-73721507 | None:intergenic |
| GAAGTAGTCCTATGAGTGTA+AGG | 0.459679 | 1_1:-73721217 | None:intergenic |
| AGGAATTGGGATTGTTGTGT+TGG | 0.466637 | 1_1:+73722273 | Msa0042790:CDS |
| GTGCAAATACAAGTTTACTT+AGG | 0.473864 | 1_1:-73721286 | None:intergenic |
| TTGGAATTAAAACTACAATT+GGG | 0.477581 | 1_1:+73722215 | Msa0042790:CDS |
| TGGGAGCAATTGCTAGCTTG+AGG | 0.481846 | 1_1:+73722383 | Msa0042790:CDS |
| ACAATCTCATAATACTCAAA+AGG | 0.487804 | 1_1:-73721665 | None:intergenic |
| CTTGTAGAAGCTGAGTGGCC+TGG | 0.487906 | 1_1:+73721755 | Msa0042790:CDS |
| GCCAACAAAGATGCAATTGT+TGG | 0.492975 | 1_1:-73722028 | None:intergenic |
| CTTATCCTCCTAACAACTCT+AGG | 0.497949 | 1_1:-73721962 | None:intergenic |
| AATAATGGACGAGGAAATAC+CGG | 0.501207 | 1_1:-73721843 | None:intergenic |
| AATGAATCGAAATCAGGATC+AGG | 0.507261 | 1_1:-73721866 | None:intergenic |
| ATGCTTACTTGGATTCATAG+TGG | 0.536626 | 1_1:+73721418 | Msa0042790:CDS |
| AGGATCAGTAATGGCGGACG+AGG | 0.545194 | 1_1:+73721892 | Msa0042790:CDS |
| AACTACAATTGGGATAATTG+TGG | 0.546358 | 1_1:+73722225 | Msa0042790:CDS |
| ATCTATTAAACCTTTGAGGT+GGG | 0.559127 | 1_1:-73721454 | None:intergenic |
| GGAGCAATTGCTAGCTTGAG+GGG | 0.563569 | 1_1:+73722385 | Msa0042790:CDS |
| AGATTCACAATCATAATGAC+AGG | 0.565619 | 1_1:+73721473 | Msa0042790:CDS |
| CTATATGTCACCCACCTCAA+AGG | 0.567998 | 1_1:+73721444 | Msa0042790:CDS |
| TTGTGTAATGCTTATATTAG+GGG | 0.572998 | 1_1:+73722159 | Msa0042790:CDS |
| CTATCTGTCATAAAAGACAT+TGG | 0.574241 | 1_1:-73722106 | None:intergenic |
| TTTACTTAGGAGTTTAAATG+TGG | 0.575857 | 1_1:-73721273 | None:intergenic |
| AGGCAGATTAACTTCAACAA+AGG | 0.577831 | 1_1:-73721197 | None:intergenic |
| GGACCAAATGAGTCAACACT+TGG | 0.581085 | 1_1:+73722196 | Msa0042790:CDS |
| TTCATTATCAGGATCAGTAA+TGG | 0.585783 | 1_1:+73721883 | Msa0042790:CDS |
| CACTCAGCTTCTACAAGAAG+CGG | 0.586574 | 1_1:-73721749 | None:intergenic |
| ATGAAAATAATGATAAAATG+AGG | 0.590735 | 1_1:+73721141 | Msa0042790:CDS |
| AACAAAGATGCAATTGTTGG+TGG | 0.598573 | 1_1:-73722025 | None:intergenic |
| GGAAAACAATGCAATGCAAG+AGG | 0.599070 | 1_1:+73721566 | Msa0042790:CDS |
| AATCTATTAAACCTTTGAGG+TGG | 0.609661 | 1_1:-73721455 | None:intergenic |
| TGTGTAATGCTTATATTAGG+GGG | 0.611243 | 1_1:+73722160 | Msa0042790:CDS |
| CTGAGCCTAGAGTTGTTAGG+AGG | 0.617408 | 1_1:+73721957 | Msa0042790:CDS |
| GCTCCCAACAAAATAGCACT+TGG | 0.619409 | 1_1:-73722367 | None:intergenic |
| ATCTCATAATACTCAAAAGG+AGG | 0.634016 | 1_1:-73721662 | None:intergenic |
| ATGACAGGATTTGGAAACAC+CGG | 0.646503 | 1_1:+73721488 | Msa0042790:CDS |
| AGGATCAGGAATAATGGACG+AGG | 0.649375 | 1_1:-73721852 | None:intergenic |
| CGCTTCTTGTAGAAGCTGAG+TGG | 0.653516 | 1_1:+73721750 | Msa0042790:CDS |
| AGTTCACTAAATATTAGGCA+AGG | 0.654744 | 1_1:-73721317 | None:intergenic |
| ATTATCAGGATCAGTAATGG+CGG | 0.689441 | 1_1:+73721886 | Msa0042790:CDS |
| CCTAATATAAGCATTACACA+AGG | 0.709180 | 1_1:-73722157 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCATATATAGTAATATTC+AGG | + | chr1_1:73720907-73720926 | Msa0042790:CDS | 15.0% |
| !! | ATGAAAATAATGATAAAATG+AGG | + | chr1_1:73721141-73721160 | Msa0042790:CDS | 15.0% |
| !! | AAAATAATCATATGTCTATT+AGG | + | chr1_1:73721927-73721946 | Msa0042790:CDS | 15.0% |
| !! | ATTCATATATAGTAATATTC+AGG | + | chr1_1:73720907-73720926 | Msa0042790:CDS | 15.0% |
| !! | ATGAAAATAATGATAAAATG+AGG | + | chr1_1:73721141-73721160 | Msa0042790:CDS | 15.0% |
| !! | AAAATAATCATATGTCTATT+AGG | + | chr1_1:73721927-73721946 | Msa0042790:CDS | 15.0% |
| !! | TAGGAATTAATTTCATTCTT+GGG | - | chr1_1:73721250-73721269 | None:intergenic | 20.0% |
| !! | TTAGGAATTAATTTCATTCT+TGG | - | chr1_1:73721251-73721270 | None:intergenic | 20.0% |
| !! | TTAAAGATTCTAGCAATAAA+GGG | - | chr1_1:73721815-73721834 | None:intergenic | 20.0% |
| !!! | AAAGAAAAATGTTTTCAACT+GGG | - | chr1_1:73722074-73722093 | None:intergenic | 20.0% |
| !! | TTGGAATTAAAACTACAATT+GGG | + | chr1_1:73722215-73722234 | Msa0042790:CDS | 20.0% |
| !! | TAGGAATTAATTTCATTCTT+GGG | - | chr1_1:73721250-73721269 | None:intergenic | 20.0% |
| !! | TTAGGAATTAATTTCATTCT+TGG | - | chr1_1:73721251-73721270 | None:intergenic | 20.0% |
| !! | TTAAAGATTCTAGCAATAAA+GGG | - | chr1_1:73721815-73721834 | None:intergenic | 20.0% |
| !!! | AAAGAAAAATGTTTTCAACT+GGG | - | chr1_1:73722074-73722093 | None:intergenic | 20.0% |
| !! | TTGGAATTAAAACTACAATT+GGG | + | chr1_1:73722215-73722234 | Msa0042790:CDS | 20.0% |
| ! | CAATATTCATAATCATCACA+TGG | - | chr1_1:73720965-73720984 | None:intergenic | 25.0% |
| ! | CATGTGATGATTATGAATAT+TGG | + | chr1_1:73720963-73720982 | Msa0042790:intron | 25.0% |
| ! | TTTACTTAGGAGTTTAAATG+TGG | - | chr1_1:73721276-73721295 | None:intergenic | 25.0% |
| ! | AACCAAGTTCACTAAATATT+AGG | - | chr1_1:73721325-73721344 | None:intergenic | 25.0% |
| !! | CATTACTCTTGAGAATTTTA+AGG | + | chr1_1:73721349-73721368 | Msa0042790:CDS | 25.0% |
| ! | CTTATGTTTCTTTATCTCAA+TGG | + | chr1_1:73721594-73721613 | Msa0042790:CDS | 25.0% |
| ! | ACAATCTCATAATACTCAAA+AGG | - | chr1_1:73721668-73721687 | None:intergenic | 25.0% |
| ! | CTTAAAGATTCTAGCAATAA+AGG | - | chr1_1:73721816-73721835 | None:intergenic | 25.0% |
| !! | AAGAAAAATGTTTTCAACTG+GGG | - | chr1_1:73722073-73722092 | None:intergenic | 25.0% |
| !! | CAAAGAAAAATGTTTTCAAC+TGG | - | chr1_1:73722075-73722094 | None:intergenic | 25.0% |
| !! | CAGTTGAAAACATTTTTCTT+TGG | + | chr1_1:73722073-73722092 | Msa0042790:CDS | 25.0% |
| ! | CTTGTGTAATGCTTATATTA+GGG | + | chr1_1:73722158-73722177 | Msa0042790:CDS | 25.0% |
| ! | TTGTGTAATGCTTATATTAG+GGG | + | chr1_1:73722159-73722178 | Msa0042790:CDS | 25.0% |
| ! | CTTGGAATTAAAACTACAAT+TGG | + | chr1_1:73722214-73722233 | Msa0042790:CDS | 25.0% |
| ! | CAATATTCATAATCATCACA+TGG | - | chr1_1:73720965-73720984 | None:intergenic | 25.0% |
| ! | CATGTGATGATTATGAATAT+TGG | + | chr1_1:73720963-73720982 | Msa0042790:intron | 25.0% |
| ! | TTTACTTAGGAGTTTAAATG+TGG | - | chr1_1:73721276-73721295 | None:intergenic | 25.0% |
| ! | AACCAAGTTCACTAAATATT+AGG | - | chr1_1:73721325-73721344 | None:intergenic | 25.0% |
| !! | CATTACTCTTGAGAATTTTA+AGG | + | chr1_1:73721349-73721368 | Msa0042790:CDS | 25.0% |
| ! | CTTATGTTTCTTTATCTCAA+TGG | + | chr1_1:73721594-73721613 | Msa0042790:CDS | 25.0% |
| ! | ACAATCTCATAATACTCAAA+AGG | - | chr1_1:73721668-73721687 | None:intergenic | 25.0% |
| ! | CTTAAAGATTCTAGCAATAA+AGG | - | chr1_1:73721816-73721835 | None:intergenic | 25.0% |
| !! | AAGAAAAATGTTTTCAACTG+GGG | - | chr1_1:73722073-73722092 | None:intergenic | 25.0% |
| !! | CAAAGAAAAATGTTTTCAAC+TGG | - | chr1_1:73722075-73722094 | None:intergenic | 25.0% |
| !! | CAGTTGAAAACATTTTTCTT+TGG | + | chr1_1:73722073-73722092 | Msa0042790:CDS | 25.0% |
| ! | CTTGTGTAATGCTTATATTA+GGG | + | chr1_1:73722158-73722177 | Msa0042790:CDS | 25.0% |
| ! | TTGTGTAATGCTTATATTAG+GGG | + | chr1_1:73722159-73722178 | Msa0042790:CDS | 25.0% |
| ! | CTTGGAATTAAAACTACAAT+TGG | + | chr1_1:73722214-73722233 | Msa0042790:CDS | 25.0% |
| !!! | CTTAGTTTTAGTCTTTGTTG+CGG | + | chr1_1:73720882-73720901 | Msa0042790:CDS | 30.0% |
| !!! | TTAGTTTTAGTCTTTGTTGC+GGG | + | chr1_1:73720883-73720902 | Msa0042790:CDS | 30.0% |
| TTTCTTATGAACTCAATTGC+AGG | + | chr1_1:73721081-73721100 | Msa0042790:intron | 30.0% | |
| GTGCAAATACAAGTTTACTT+AGG | - | chr1_1:73721289-73721308 | None:intergenic | 30.0% | |
| AGTTCACTAAATATTAGGCA+AGG | - | chr1_1:73721320-73721339 | None:intergenic | 30.0% | |
| TGCCTAATATTTAGTGAACT+TGG | + | chr1_1:73721320-73721339 | Msa0042790:CDS | 30.0% | |
| !! | CTCTTGAGAATTTTAAGGAA+TGG | + | chr1_1:73721354-73721373 | Msa0042790:CDS | 30.0% |
| !! | TTGAGAATTTTAAGGAATGG+TGG | + | chr1_1:73721357-73721376 | Msa0042790:CDS | 30.0% |
| ! | GTGCTTCTTAGTACATTTTT+CGG | + | chr1_1:73721395-73721414 | Msa0042790:CDS | 30.0% |
| !! | ATCTATTAAACCTTTGAGGT+GGG | - | chr1_1:73721457-73721476 | None:intergenic | 30.0% |
| ! | AATCTATTAAACCTTTGAGG+TGG | - | chr1_1:73721458-73721477 | None:intergenic | 30.0% |
| GTGAATCTATTAAACCTTTG+AGG | - | chr1_1:73721461-73721480 | None:intergenic | 30.0% | |
| AGATTCACAATCATAATGAC+AGG | + | chr1_1:73721473-73721492 | Msa0042790:CDS | 30.0% | |
| ACAATCATAATGACAGGATT+TGG | + | chr1_1:73721479-73721498 | Msa0042790:CDS | 30.0% | |
| ! | CATACTCAAAATACTCCTTT+TGG | + | chr1_1:73721545-73721564 | Msa0042790:CDS | 30.0% |
| !! | CACTTTTGTTTATCACATGA+TGG | + | chr1_1:73721637-73721656 | Msa0042790:CDS | 30.0% |
| ATCTCATAATACTCAAAAGG+AGG | - | chr1_1:73721665-73721684 | None:intergenic | 30.0% | |
| GTTTCTTTATCTTCAATTCC+AGG | - | chr1_1:73721776-73721795 | None:intergenic | 30.0% | |
| !! | AGAATCTTTAAGAGCTTTTC+CGG | + | chr1_1:73721824-73721843 | Msa0042790:CDS | 30.0% |
| TTCATTATCAGGATCAGTAA+TGG | + | chr1_1:73721883-73721902 | Msa0042790:CDS | 30.0% | |
| TCATATGTCTATTAGGTGTT+TGG | + | chr1_1:73721934-73721953 | Msa0042790:CDS | 30.0% | |
| ! | TCTTTGTTGGCTATTATCAT+TGG | + | chr1_1:73722040-73722059 | Msa0042790:CDS | 30.0% |
| CTATCTGTCATAAAAGACAT+TGG | - | chr1_1:73722109-73722128 | None:intergenic | 30.0% | |
| ! | GTCTTTTATGACAGATAGTT+TGG | + | chr1_1:73722111-73722130 | Msa0042790:CDS | 30.0% |
| ! | GACAGATAGTTTGGAAATTT+TGG | + | chr1_1:73722120-73722139 | Msa0042790:CDS | 30.0% |
| CCTAATATAAGCATTACACA+AGG | - | chr1_1:73722160-73722179 | None:intergenic | 30.0% | |
| CCTTGTGTAATGCTTATATT+AGG | + | chr1_1:73722157-73722176 | Msa0042790:CDS | 30.0% | |
| TGTGTAATGCTTATATTAGG+GGG | + | chr1_1:73722160-73722179 | Msa0042790:CDS | 30.0% | |
| AACTACAATTGGGATAATTG+TGG | + | chr1_1:73722225-73722244 | Msa0042790:CDS | 30.0% | |
| !!! | GGCTGATAAGTTGAATTTTT+TGG | + | chr1_1:73722294-73722313 | Msa0042790:CDS | 30.0% |
| !!! | CTTAGTTTTAGTCTTTGTTG+CGG | + | chr1_1:73720882-73720901 | Msa0042790:CDS | 30.0% |
| !!! | TTAGTTTTAGTCTTTGTTGC+GGG | + | chr1_1:73720883-73720902 | Msa0042790:CDS | 30.0% |
| TTTCTTATGAACTCAATTGC+AGG | + | chr1_1:73721081-73721100 | Msa0042790:intron | 30.0% | |
| GTGCAAATACAAGTTTACTT+AGG | - | chr1_1:73721289-73721308 | None:intergenic | 30.0% | |
| AGTTCACTAAATATTAGGCA+AGG | - | chr1_1:73721320-73721339 | None:intergenic | 30.0% | |
| TGCCTAATATTTAGTGAACT+TGG | + | chr1_1:73721320-73721339 | Msa0042790:CDS | 30.0% | |
| !! | CTCTTGAGAATTTTAAGGAA+TGG | + | chr1_1:73721354-73721373 | Msa0042790:CDS | 30.0% |
| !! | TTGAGAATTTTAAGGAATGG+TGG | + | chr1_1:73721357-73721376 | Msa0042790:CDS | 30.0% |
| ! | GTGCTTCTTAGTACATTTTT+CGG | + | chr1_1:73721395-73721414 | Msa0042790:CDS | 30.0% |
| !! | ATCTATTAAACCTTTGAGGT+GGG | - | chr1_1:73721457-73721476 | None:intergenic | 30.0% |
| ! | AATCTATTAAACCTTTGAGG+TGG | - | chr1_1:73721458-73721477 | None:intergenic | 30.0% |
| GTGAATCTATTAAACCTTTG+AGG | - | chr1_1:73721461-73721480 | None:intergenic | 30.0% | |
| AGATTCACAATCATAATGAC+AGG | + | chr1_1:73721473-73721492 | Msa0042790:CDS | 30.0% | |
| ACAATCATAATGACAGGATT+TGG | + | chr1_1:73721479-73721498 | Msa0042790:CDS | 30.0% | |
| ! | CATACTCAAAATACTCCTTT+TGG | + | chr1_1:73721545-73721564 | Msa0042790:CDS | 30.0% |
| !! | CACTTTTGTTTATCACATGA+TGG | + | chr1_1:73721637-73721656 | Msa0042790:CDS | 30.0% |
| ATCTCATAATACTCAAAAGG+AGG | - | chr1_1:73721665-73721684 | None:intergenic | 30.0% | |
| GTTTCTTTATCTTCAATTCC+AGG | - | chr1_1:73721776-73721795 | None:intergenic | 30.0% | |
| !! | AGAATCTTTAAGAGCTTTTC+CGG | + | chr1_1:73721824-73721843 | Msa0042790:CDS | 30.0% |
| TTCATTATCAGGATCAGTAA+TGG | + | chr1_1:73721883-73721902 | Msa0042790:CDS | 30.0% | |
| TCATATGTCTATTAGGTGTT+TGG | + | chr1_1:73721934-73721953 | Msa0042790:CDS | 30.0% | |
| ! | TCTTTGTTGGCTATTATCAT+TGG | + | chr1_1:73722040-73722059 | Msa0042790:CDS | 30.0% |
| CTATCTGTCATAAAAGACAT+TGG | - | chr1_1:73722109-73722128 | None:intergenic | 30.0% | |
| ! | GTCTTTTATGACAGATAGTT+TGG | + | chr1_1:73722111-73722130 | Msa0042790:CDS | 30.0% |
| ! | GACAGATAGTTTGGAAATTT+TGG | + | chr1_1:73722120-73722139 | Msa0042790:CDS | 30.0% |
| CCTAATATAAGCATTACACA+AGG | - | chr1_1:73722160-73722179 | None:intergenic | 30.0% | |
| CCTTGTGTAATGCTTATATT+AGG | + | chr1_1:73722157-73722176 | Msa0042790:CDS | 30.0% | |
| TGTGTAATGCTTATATTAGG+GGG | + | chr1_1:73722160-73722179 | Msa0042790:CDS | 30.0% | |
| AACTACAATTGGGATAATTG+TGG | + | chr1_1:73722225-73722244 | Msa0042790:CDS | 30.0% | |
| !!! | GGCTGATAAGTTGAATTTTT+TGG | + | chr1_1:73722294-73722313 | Msa0042790:CDS | 30.0% |
| CGCAACAAAGACTAAAACTA+AGG | - | chr1_1:73720884-73720903 | None:intergenic | 35.0% | |
| AGGCAGATTAACTTCAACAA+AGG | - | chr1_1:73721200-73721219 | None:intergenic | 35.0% | |
| TTAATCTGCCTTACACTCAT+AGG | + | chr1_1:73721209-73721228 | Msa0042790:CDS | 35.0% | |
| AGGAGTTTAAATGTGGCTTT+AGG | - | chr1_1:73721269-73721288 | None:intergenic | 35.0% | |
| ! | GTACTAAGAAGCACATTAAC+TGG | - | chr1_1:73721389-73721408 | None:intergenic | 35.0% |
| !! | ACATTTTTCGGATGCTTACT+TGG | + | chr1_1:73721407-73721426 | Msa0042790:CDS | 35.0% |
| ATGCTTACTTGGATTCATAG+TGG | + | chr1_1:73721418-73721437 | Msa0042790:CDS | 35.0% | |
| TACAGCAATGAGAAGATTAC+CGG | - | chr1_1:73721510-73721529 | None:intergenic | 35.0% | |
| AATCTTCTCATTGCTGTAGT+TGG | + | chr1_1:73721512-73721531 | Msa0042790:CDS | 35.0% | |
| ! | GCATTGCATTGTTTTCCAAA+AGG | - | chr1_1:73721563-73721582 | None:intergenic | 35.0% |
| !! | AATAATGGACGAGGAAATAC+CGG | - | chr1_1:73721846-73721865 | None:intergenic | 35.0% |
| GAAATCAGGATCAGGAATAA+TGG | - | chr1_1:73721861-73721880 | None:intergenic | 35.0% | |
| AATGAATCGAAATCAGGATC+AGG | - | chr1_1:73721869-73721888 | None:intergenic | 35.0% | |
| ! | CCTGATAATGAATCGAAATC+AGG | - | chr1_1:73721875-73721894 | None:intergenic | 35.0% |
| CCTGATTTCGATTCATTATC+AGG | + | chr1_1:73721872-73721891 | Msa0042790:CDS | 35.0% | |
| ATTATCAGGATCAGTAATGG+CGG | + | chr1_1:73721886-73721905 | Msa0042790:CDS | 35.0% | |
| GGTTGAAGTATGTGATGAAT+TGG | - | chr1_1:73722007-73722026 | None:intergenic | 35.0% | |
| AACAAAGATGCAATTGTTGG+TGG | - | chr1_1:73722028-73722047 | None:intergenic | 35.0% | |
| ACCAACAATTGCATCTTTGT+TGG | + | chr1_1:73722027-73722046 | Msa0042790:CDS | 35.0% | |
| !! | GATAGTTTGGAAATTTTGGC+TGG | + | chr1_1:73722124-73722143 | Msa0042790:CDS | 35.0% |
| !! | ATTCCAAGTGTTGACTCATT+TGG | - | chr1_1:73722202-73722221 | None:intergenic | 35.0% |
| TGCTTCCTGTTATAGGAATT+GGG | + | chr1_1:73722260-73722279 | Msa0042790:CDS | 35.0% | |
| ACAATCCCAATTCCTATAAC+AGG | - | chr1_1:73722268-73722287 | None:intergenic | 35.0% | |
| !!! | AACACCAAGTGCTATTTTGT+TGG | + | chr1_1:73722363-73722382 | Msa0042790:CDS | 35.0% |
| !!! | ACACCAAGTGCTATTTTGTT+GGG | + | chr1_1:73722364-73722383 | Msa0042790:CDS | 35.0% |
| CGCAACAAAGACTAAAACTA+AGG | - | chr1_1:73720884-73720903 | None:intergenic | 35.0% | |
| AGGCAGATTAACTTCAACAA+AGG | - | chr1_1:73721200-73721219 | None:intergenic | 35.0% | |
| TTAATCTGCCTTACACTCAT+AGG | + | chr1_1:73721209-73721228 | Msa0042790:CDS | 35.0% | |
| AGGAGTTTAAATGTGGCTTT+AGG | - | chr1_1:73721269-73721288 | None:intergenic | 35.0% | |
| ! | GTACTAAGAAGCACATTAAC+TGG | - | chr1_1:73721389-73721408 | None:intergenic | 35.0% |
| !! | ACATTTTTCGGATGCTTACT+TGG | + | chr1_1:73721407-73721426 | Msa0042790:CDS | 35.0% |
| ATGCTTACTTGGATTCATAG+TGG | + | chr1_1:73721418-73721437 | Msa0042790:CDS | 35.0% | |
| TACAGCAATGAGAAGATTAC+CGG | - | chr1_1:73721510-73721529 | None:intergenic | 35.0% | |
| AATCTTCTCATTGCTGTAGT+TGG | + | chr1_1:73721512-73721531 | Msa0042790:CDS | 35.0% | |
| ! | GCATTGCATTGTTTTCCAAA+AGG | - | chr1_1:73721563-73721582 | None:intergenic | 35.0% |
| !! | AATAATGGACGAGGAAATAC+CGG | - | chr1_1:73721846-73721865 | None:intergenic | 35.0% |
| GAAATCAGGATCAGGAATAA+TGG | - | chr1_1:73721861-73721880 | None:intergenic | 35.0% | |
| AATGAATCGAAATCAGGATC+AGG | - | chr1_1:73721869-73721888 | None:intergenic | 35.0% | |
| ! | CCTGATAATGAATCGAAATC+AGG | - | chr1_1:73721875-73721894 | None:intergenic | 35.0% |
| CCTGATTTCGATTCATTATC+AGG | + | chr1_1:73721872-73721891 | Msa0042790:CDS | 35.0% | |
| ATTATCAGGATCAGTAATGG+CGG | + | chr1_1:73721886-73721905 | Msa0042790:CDS | 35.0% | |
| GGTTGAAGTATGTGATGAAT+TGG | - | chr1_1:73722007-73722026 | None:intergenic | 35.0% | |
| AACAAAGATGCAATTGTTGG+TGG | - | chr1_1:73722028-73722047 | None:intergenic | 35.0% | |
| ACCAACAATTGCATCTTTGT+TGG | + | chr1_1:73722027-73722046 | Msa0042790:CDS | 35.0% | |
| !! | GATAGTTTGGAAATTTTGGC+TGG | + | chr1_1:73722124-73722143 | Msa0042790:CDS | 35.0% |
| !! | ATTCCAAGTGTTGACTCATT+TGG | - | chr1_1:73722202-73722221 | None:intergenic | 35.0% |
| TGCTTCCTGTTATAGGAATT+GGG | + | chr1_1:73722260-73722279 | Msa0042790:CDS | 35.0% | |
| ACAATCCCAATTCCTATAAC+AGG | - | chr1_1:73722268-73722287 | None:intergenic | 35.0% | |
| !!! | AACACCAAGTGCTATTTTGT+TGG | + | chr1_1:73722363-73722382 | Msa0042790:CDS | 35.0% |
| !!! | ACACCAAGTGCTATTTTGTT+GGG | + | chr1_1:73722364-73722383 | Msa0042790:CDS | 35.0% |
| !! | GGTGTTATTGCAATCTACTC+TGG | + | chr1_1:73720984-73721003 | Msa0042790:intron | 40.0% |
| GAAGTAGTCCTATGAGTGTA+AGG | - | chr1_1:73721220-73721239 | None:intergenic | 40.0% | |
| ATGACAGGATTTGGAAACAC+CGG | + | chr1_1:73721488-73721507 | Msa0042790:CDS | 40.0% | |
| GGAAAACAATGCAATGCAAG+AGG | + | chr1_1:73721566-73721585 | Msa0042790:CDS | 40.0% | |
| CTTATCCTCCTAACAACTCT+AGG | - | chr1_1:73721965-73721984 | None:intergenic | 40.0% | |
| GCCAACAAAGATGCAATTGT+TGG | - | chr1_1:73722031-73722050 | None:intergenic | 40.0% | |
| ! | CTTGTTGTGCTTCCTGTTAT+AGG | + | chr1_1:73722253-73722272 | Msa0042790:CDS | 40.0% |
| GTGCTTCCTGTTATAGGAAT+TGG | + | chr1_1:73722259-73722278 | Msa0042790:CDS | 40.0% | |
| AGGAATTGGGATTGTTGTGT+TGG | + | chr1_1:73722273-73722292 | Msa0042790:CDS | 40.0% | |
| AAGCTTCAGCAGTTCTATTC+TGG | + | chr1_1:73722422-73722441 | Msa0042790:CDS | 40.0% | |
| !! | GGTGTTATTGCAATCTACTC+TGG | + | chr1_1:73720984-73721003 | Msa0042790:intron | 40.0% |
| GAAGTAGTCCTATGAGTGTA+AGG | - | chr1_1:73721220-73721239 | None:intergenic | 40.0% | |
| ATGACAGGATTTGGAAACAC+CGG | + | chr1_1:73721488-73721507 | Msa0042790:CDS | 40.0% | |
| GGAAAACAATGCAATGCAAG+AGG | + | chr1_1:73721566-73721585 | Msa0042790:CDS | 40.0% | |
| CTTATCCTCCTAACAACTCT+AGG | - | chr1_1:73721965-73721984 | None:intergenic | 40.0% | |
| GCCAACAAAGATGCAATTGT+TGG | - | chr1_1:73722031-73722050 | None:intergenic | 40.0% | |
| ! | CTTGTTGTGCTTCCTGTTAT+AGG | + | chr1_1:73722253-73722272 | Msa0042790:CDS | 40.0% |
| GTGCTTCCTGTTATAGGAAT+TGG | + | chr1_1:73722259-73722278 | Msa0042790:CDS | 40.0% | |
| AGGAATTGGGATTGTTGTGT+TGG | + | chr1_1:73722273-73722292 | Msa0042790:CDS | 40.0% | |
| AAGCTTCAGCAGTTCTATTC+TGG | + | chr1_1:73722422-73722441 | Msa0042790:CDS | 40.0% | |
| CTATATGTCACCCACCTCAA+AGG | + | chr1_1:73721444-73721463 | Msa0042790:CDS | 45.0% | |
| CACTCAGCTTCTACAAGAAG+CGG | - | chr1_1:73721752-73721771 | None:intergenic | 45.0% | |
| !! | AGGATCAGGAATAATGGACG+AGG | - | chr1_1:73721855-73721874 | None:intergenic | 45.0% |
| !!! | GGAAATTTTGGCTGGTGCAA+TGG | + | chr1_1:73722132-73722151 | Msa0042790:CDS | 45.0% |
| GGACCAAATGAGTCAACACT+TGG | + | chr1_1:73722196-73722215 | Msa0042790:CDS | 45.0% | |
| GCTCCCAACAAAATAGCACT+TGG | - | chr1_1:73722370-73722389 | None:intergenic | 45.0% | |
| CTATATGTCACCCACCTCAA+AGG | + | chr1_1:73721444-73721463 | Msa0042790:CDS | 45.0% | |
| CACTCAGCTTCTACAAGAAG+CGG | - | chr1_1:73721752-73721771 | None:intergenic | 45.0% | |
| !! | AGGATCAGGAATAATGGACG+AGG | - | chr1_1:73721855-73721874 | None:intergenic | 45.0% |
| !!! | GGAAATTTTGGCTGGTGCAA+TGG | + | chr1_1:73722132-73722151 | Msa0042790:CDS | 45.0% |
| GGACCAAATGAGTCAACACT+TGG | + | chr1_1:73722196-73722215 | Msa0042790:CDS | 45.0% | |
| GCTCCCAACAAAATAGCACT+TGG | - | chr1_1:73722370-73722389 | None:intergenic | 45.0% | |
| CGCTTCTTGTAGAAGCTGAG+TGG | + | chr1_1:73721750-73721769 | Msa0042790:CDS | 50.0% | |
| TGGCTGAGCCTAGAGTTGTT+AGG | + | chr1_1:73721954-73721973 | Msa0042790:CDS | 50.0% | |
| CTGAGCCTAGAGTTGTTAGG+AGG | + | chr1_1:73721957-73721976 | Msa0042790:CDS | 50.0% | |
| ! | TTAGGGGGTATGCTAGCTGA+AGG | + | chr1_1:73722175-73722194 | Msa0042790:CDS | 50.0% |
| ! | TGGGAGCAATTGCTAGCTTG+AGG | + | chr1_1:73722383-73722402 | Msa0042790:CDS | 50.0% |
| ! | GGGAGCAATTGCTAGCTTGA+GGG | + | chr1_1:73722384-73722403 | Msa0042790:CDS | 50.0% |
| ! | GGAGCAATTGCTAGCTTGAG+GGG | + | chr1_1:73722385-73722404 | Msa0042790:CDS | 50.0% |
| CGCTTCTTGTAGAAGCTGAG+TGG | + | chr1_1:73721750-73721769 | Msa0042790:CDS | 50.0% | |
| TGGCTGAGCCTAGAGTTGTT+AGG | + | chr1_1:73721954-73721973 | Msa0042790:CDS | 50.0% | |
| CTGAGCCTAGAGTTGTTAGG+AGG | + | chr1_1:73721957-73721976 | Msa0042790:CDS | 50.0% | |
| ! | TTAGGGGGTATGCTAGCTGA+AGG | + | chr1_1:73722175-73722194 | Msa0042790:CDS | 50.0% |
| ! | TGGGAGCAATTGCTAGCTTG+AGG | + | chr1_1:73722383-73722402 | Msa0042790:CDS | 50.0% |
| ! | GGGAGCAATTGCTAGCTTGA+GGG | + | chr1_1:73722384-73722403 | Msa0042790:CDS | 50.0% |
| ! | GGAGCAATTGCTAGCTTGAG+GGG | + | chr1_1:73722385-73722404 | Msa0042790:CDS | 50.0% |
| CTTGTAGAAGCTGAGTGGCC+TGG | + | chr1_1:73721755-73721774 | Msa0042790:CDS | 55.0% | |
| !! | AGGATCAGTAATGGCGGACG+AGG | + | chr1_1:73721892-73721911 | Msa0042790:CDS | 55.0% |
| CTTGTAGAAGCTGAGTGGCC+TGG | + | chr1_1:73721755-73721774 | Msa0042790:CDS | 55.0% | |
| !! | AGGATCAGTAATGGCGGACG+AGG | + | chr1_1:73721892-73721911 | Msa0042790:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 73720828 | 73722516 | 73720828 | ID=Msa0042790;Name=Msa0042790 |
| chr1_1 | mRNA | 73720828 | 73722516 | 73720828 | ID=Msa0042790-mRNA-1;Parent=Msa0042790;Name=Msa0042790-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0|1|0|0|2|0|504 |
| chr1_1 | exon | 73720828 | 73720928 | 73720828 | ID=Msa0042790-mRNA-1:exon:24711;Parent=Msa0042790-mRNA-1 |
| chr1_1 | exon | 73721103 | 73722516 | 73721103 | ID=Msa0042790-mRNA-1:exon:24712;Parent=Msa0042790-mRNA-1 |
| chr1_1 | CDS | 73720828 | 73720928 | 73720828 | ID=Msa0042790-mRNA-1:cds;Parent=Msa0042790-mRNA-1 |
| chr1_1 | CDS | 73721103 | 73722516 | 73721103 | ID=Msa0042790-mRNA-1:cds;Parent=Msa0042790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
