AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0998940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0998940 MtrunA17_Chr6g0484911 85.789 190 16 2 28 206 17 206 3.04e-115 327
Msa0998940 MtrunA17_Chr5g0422751 68.212 151 39 4 60 206 11 156 9.70e-68 204
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0998940 AT1G68660.1 74.172 151 33 4 60 206 11 159 1.50e-73 219
Msa0998940 AT1G68660.2 56.291 151 30 5 60 206 11 129 1.46e-45 147

Find 55 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCAGGTGATAAATATTT+TGG 0.167312 6_4:-80438730 Msa0998940:intron
ACCAATCAGTAGTAATATTT+AGG 0.222061 6_4:-80437040 Msa0998940:three_prime_UTR
ATGCAAGAAGCACATATTAA+TGG 0.300616 6_4:-80437507 Msa0998940:CDS
TTTGAGTTTACAAGTCAATA+AGG 0.304316 6_4:+80439658 None:intergenic
ACTGCGTAATGAAGCTTTCA+TGG 0.335357 6_4:+80439479 None:intergenic
GGCACCTAGTTCTATACTTT+GGG 0.359915 6_4:+80439554 None:intergenic
ATTCACCACAGTCAGTAAAT+TGG 0.370829 6_4:-80437340 Msa0998940:three_prime_UTR
CGTTTGATCATCTTCATTCA+AGG 0.379794 6_4:+80437315 None:intergenic
GGTATATATAGTAAAACTAT+AGG 0.382747 6_4:-80437205 Msa0998940:three_prime_UTR
GTTTCAAATATGGCAAAGAT+AGG 0.389452 6_4:-80438708 Msa0998940:CDS
TGGCACCTAGTTCTATACTT+TGG 0.400978 6_4:+80439553 None:intergenic
ACCTAAATATTACTACTGAT+TGG 0.423762 6_4:+80437039 None:intergenic
GCAATATCAACTGTCATTCC+AGG 0.427583 6_4:+80437540 None:intergenic
GTCAAATTCAGATTCTCGTC+CGG 0.430228 6_4:+80438606 None:intergenic
TGCATGCAATTGAGAGGAAA+TGG 0.433575 6_4:-80437438 Msa0998940:CDS
TCTCTATGTGTGGTGGCAAT+TGG 0.441685 6_4:+80439511 None:intergenic
TTGTTCGATCTTCATTCAAA+AGG 0.444402 6_4:-80437251 Msa0998940:three_prime_UTR
GTGGCAATTGGAAATAATAA+TGG 0.445292 6_4:+80439523 None:intergenic
GAGAATCTGAATTTGACTTA+AGG 0.445426 6_4:-80438600 Msa0998940:intron
GAGTGGATGCATTGAGTAGT+TGG 0.453547 6_4:+80439427 None:intergenic
TGGAAAAGGTGGTGGTTTGT+TGG 0.473028 6_4:-80438659 Msa0998940:CDS
GTATACAATCTATCTTTAAG+TGG 0.490214 6_4:+80437138 None:intergenic
TTGTGTAGCATTACTCTGTA+TGG 0.492187 6_4:+80437615 None:intergenic
TTCCTCTCAATTGCATGCAA+TGG 0.502233 6_4:+80437442 None:intergenic
GTATATATAGTAAAACTATA+GGG 0.507181 6_4:-80437204 Msa0998940:three_prime_UTR
CTACTCAATGCATCCACTCC+TGG 0.512586 6_4:-80439423 Msa0998940:intron
TTAGGTGAAATTAGAGCAAG+TGG 0.519142 6_4:+80439450 None:intergenic
TCAAATTCAGATTCTCGTCC+GGG 0.525010 6_4:+80438607 None:intergenic
TAGTAAAACTATAGGGTGCT+AGG 0.525302 6_4:-80437197 Msa0998940:three_prime_UTR
ACATTGGTAGCCAATGGAAA+AGG 0.525846 6_4:-80438673 Msa0998940:CDS
ATTTATGACAAGACATTGAA+CGG 0.532711 6_4:-80437112 Msa0998940:three_prime_UTR
ACTCAACAACCACCATCAGC+TGG 0.532785 6_4:+80437396 None:intergenic
TATACAATCTATCTTTAAGT+GGG 0.544157 6_4:+80437139 None:intergenic
TTGAGTTTCTCTATGTGTGG+TGG 0.546339 6_4:+80439504 None:intergenic
AGTTCAATTGAGCCAGCTGA+TGG 0.556313 6_4:-80437408 Msa0998940:CDS
GATGCATTGAGTAGTTGGTT+AGG 0.562303 6_4:+80439432 None:intergenic
TACTCCCAAAGTATAGAACT+AGG 0.570420 6_4:-80439558 Msa0998940:CDS
GTAGCCAATGGAAAAGGTGG+TGG 0.570640 6_4:-80438667 Msa0998940:CDS
AGGTTCCAATTTACTGACTG+TGG 0.570732 6_4:+80437335 None:intergenic
TAGGAGTGTTGTAATGACAT+TGG 0.574699 6_4:-80438689 Msa0998940:CDS
CAATCTATCTTTAAGTGGGA+AGG 0.577145 6_4:+80437143 None:intergenic
GCTTTGAGTTTCTCTATGTG+TGG 0.578208 6_4:+80439501 None:intergenic
TGAGTTATAATTACCAGGAG+TGG 0.591813 6_4:+80439410 None:intergenic
GACCATTGCATGCAATTGAG+AGG 0.614338 6_4:-80437444 Msa0998940:CDS
TCTATCTTTAAGTGGGAAGG+AGG 0.615317 6_4:+80437146 None:intergenic
GAAATAATAATGGCAAGATG+TGG 0.615375 6_4:+80439533 None:intergenic
TTGGTAGCCAATGGAAAAGG+TGG 0.633632 6_4:-80438670 Msa0998940:CDS
GTGTTGATGAAAGTGATACC+TGG 0.634232 6_4:-80437558 Msa0998940:CDS
AAGTGGGAAGGAGGACACCA+TGG 0.643900 6_4:+80437155 None:intergenic
TGTAGCATTACTCTGTATGG+TGG 0.656579 6_4:+80437618 None:intergenic
GTAATGACATTGGTAGCCAA+TGG 0.658082 6_4:-80438679 Msa0998940:CDS
ACATATTAATGGATTAGCAG+TGG 0.658551 6_4:-80437496 Msa0998940:CDS
TACTGACTGTGGTGAATGCG+AGG 0.662618 6_4:+80437346 None:intergenic
TCAATTGAGCCAGCTGATGG+TGG 0.665740 6_4:-80437405 Msa0998940:CDS
CTGATTGATTGACTGCGATG+AGG 0.678803 6_4:-80437226 Msa0998940:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCCTAAAATTATAATAATAA+AGG - chr6_4:80437665-80437684 Msa0998940:intron 10.0%
!! CCTAAAATTATAATAATAAA+GGG - chr6_4:80437666-80437685 Msa0998940:intron 10.0%
!!! ACTAGTAAATTATTTTATTA+TGG - chr6_4:80438492-80438511 Msa0998940:intron 10.0%
!!! TACTATGTTGATTTTTTTTT+GGG + chr6_4:80437015-80437034 None:intergenic 15.0%
!!! TTACTATGTTGATTTTTTTT+TGG + chr6_4:80437016-80437035 None:intergenic 15.0%
!!! CCCTTTATTATTATAATTTT+AGG + chr6_4:80437669-80437688 None:intergenic 15.0%
!! ATAGATTAAATATCAAAGAT+AGG - chr6_4:80437732-80437751 Msa0998940:intron 15.0%
!! CGTTAAAAAAAATTGTATTA+AGG - chr6_4:80437834-80437853 Msa0998940:intron 15.0%
!!! AAATATTTTGGTTTCAAATA+TGG - chr6_4:80437902-80437921 Msa0998940:intron 15.0%
!!! TAAAATTTTGATGTGAAATA+TGG + chr6_4:80438185-80438204 None:intergenic 15.0%
!!! ATTTTATTATGGACTTATAT+TGG - chr6_4:80438503-80438522 Msa0998940:intron 15.0%
!! GTATATATAGTAAAACTATA+GGG - chr6_4:80439416-80439435 Msa0998940:intron 15.0%
!!! TATTGTTTTTTAATGAAACA+AGG - chr6_4:80439629-80439648 Msa0998940:exon 15.0%
!!! ACTATGTTGATTTTTTTTTG+GGG + chr6_4:80437014-80437033 None:intergenic 20.0%
!! AATTAATCAACAAAGCAAAA+TGG + chr6_4:80437312-80437331 None:intergenic 20.0%
!! ATTGTTTCAGTATATAAACT+CGG - chr6_4:80437517-80437536 Msa0998940:CDS 20.0%
!!! AATATTTTCTTCAATTGAGT+TGG + chr6_4:80437592-80437611 None:intergenic 20.0%
!! CATATAAAATTTGTAATTGC+AGG - chr6_4:80437875-80437894 Msa0998940:intron 20.0%
!!! AAATTTGAAGCTGTTTTTTT+AGG + chr6_4:80438420-80438439 None:intergenic 20.0%
!! ATTAAAGTAGATTGAAAAAC+AGG - chr6_4:80438597-80438616 Msa0998940:intron 20.0%
!!! GTTTTATTGTTTTTGTTTCT+AGG - chr6_4:80438961-80438980 Msa0998940:intron 20.0%
!! GGTATATATAGTAAAACTAT+AGG - chr6_4:80439415-80439434 Msa0998940:intron 20.0%
!!! TATATTATACACATTTTCCA+TGG - chr6_4:80439448-80439467 Msa0998940:CDS 20.0%
!! TATACAATCTATCTTTAAGT+GGG + chr6_4:80439484-80439503 None:intergenic 20.0%
!! TTTGAGTTTACAAGTCAATA+AGG + chr6_4:80436965-80436984 None:intergenic 25.0%
! AATAATCATCTAGTTGTTAG+AGG - chr6_4:80437363-80437382 Msa0998940:three_prime_UTR 25.0%
! CTGAACTTCAAATTATACAA+GGG + chr6_4:80437395-80437414 None:intergenic 25.0%
! ACTGAACTTCAAATTATACA+AGG + chr6_4:80437396-80437415 None:intergenic 25.0%
! AATAATCATCTAGTTGTTAG+AGG - chr6_4:80437363-80437382 Msa0998940:three_prime_UTR 25.0%
! CTGAACTTCAAATTATACAA+GGG + chr6_4:80437395-80437414 None:intergenic 25.0%
! ACTGAACTTCAAATTATACA+AGG + chr6_4:80437396-80437415 None:intergenic 25.0%
! TTGTTTCAGTATATAAACTC+GGG - chr6_4:80437518-80437537 Msa0998940:CDS 25.0%
! TGATTAACGAGCTTAATTTA+TGG + chr6_4:80437562-80437581 None:intergenic 25.0%
! ATTGATGAAATTGTGTAAGA+AGG - chr6_4:80437609-80437628 Msa0998940:CDS 25.0%
!!! TAGGAGTATTATAATGACTA+TGG - chr6_4:80437751-80437770 Msa0998940:intron 25.0%
!! TAACTGAAATACATTTTCAC+TGG + chr6_4:80437780-80437799 None:intergenic 25.0%
!! ATTGCAGGTGATAAATATTT+TGG - chr6_4:80437890-80437909 Msa0998940:intron 25.0%
! ATGTGAAATATGGTATCAAT+TGG + chr6_4:80438175-80438194 None:intergenic 25.0%
! ACATTAGAAGTTGAAAGATT+AGG - chr6_4:80438216-80438235 Msa0998940:intron 25.0%
! CATTAGAAGTTGAAAGATTA+GGG - chr6_4:80438217-80438236 Msa0998940:intron 25.0%
! TTTCAACATTGTTATACACA+TGG + chr6_4:80438703-80438722 None:intergenic 25.0%
! TAGTGATCAATAGCAAAATT+TGG - chr6_4:80438772-80438791 Msa0998940:intron 25.0%
! ACAATAAAACATGTCATCAA+AGG + chr6_4:80438951-80438970 None:intergenic 25.0%
! GTATACAATCTATCTTTAAG+TGG + chr6_4:80439485-80439504 None:intergenic 25.0%
! ATTTATGACAAGACATTGAA+CGG - chr6_4:80439508-80439527 Msa0998940:CDS 25.0%
! ACCAATCAGTAGTAATATTT+AGG - chr6_4:80439580-80439599 Msa0998940:CDS 25.0%
! ACCTAAATATTACTACTGAT+TGG + chr6_4:80439584-80439603 None:intergenic 25.0%
GAAATAATAATGGCAAGATG+TGG + chr6_4:80437090-80437109 None:intergenic 30.0%
GTGGCAATTGGAAATAATAA+TGG + chr6_4:80437100-80437119 None:intergenic 30.0%
AAAACAAGCAATAAAGAGTG+TGG + chr6_4:80437237-80437256 None:intergenic 30.0%
TCAGTCGAGTTAATTAAAGT+CGG - chr6_4:80437411-80437430 Msa0998940:CDS 30.0%
TCAGTCGAGTTAATTAAAGT+CGG - chr6_4:80437411-80437430 Msa0998940:CDS 30.0%
GTTTCAAATATGGCAAAGAT+AGG - chr6_4:80437912-80437931 Msa0998940:intron 30.0%
! GAGAATCTGAATTTGACTTA+AGG - chr6_4:80438020-80438039 Msa0998940:intron 30.0%
GGTCTAACTAAAATTTGACT+CGG - chr6_4:80438293-80438312 Msa0998940:intron 30.0%
AGTACACCTCAAATTGTAAA+AGG + chr6_4:80438464-80438483 None:intergenic 30.0%
! TACAATTTGAGGTGTACTTA+AGG - chr6_4:80438466-80438485 Msa0998940:intron 30.0%
! ACAATTTGAGGTGTACTTAA+GGG - chr6_4:80438467-80438486 Msa0998940:intron 30.0%
TAGTTCAATGGGAAGAATAA+TGG + chr6_4:80438554-80438573 None:intergenic 30.0%
! CTTCACATGTTTAGTTCAAT+GGG + chr6_4:80438565-80438584 None:intergenic 30.0%
! ATTTCTATTTTGCAAGCAAG+TGG - chr6_4:80438881-80438900 Msa0998940:intron 30.0%
! ATGCAAGAAGCACATATTAA+TGG - chr6_4:80439113-80439132 Msa0998940:intron 30.0%
!! ACATATTAATGGATTAGCAG+TGG - chr6_4:80439124-80439143 Msa0998940:intron 30.0%
TTGTTCGATCTTCATTCAAA+AGG - chr6_4:80439369-80439388 Msa0998940:intron 30.0%
!!! TTTTGGGGTGACATATTGTA+AGG + chr6_4:80436999-80437018 None:intergenic 35.0%
TACTCCCAAAGTATAGAACT+AGG - chr6_4:80437062-80437081 Msa0998940:three_prime_UTR 35.0%
TTAGGTGAAATTAGAGCAAG+TGG + chr6_4:80437173-80437192 None:intergenic 35.0%
TGAGTTATAATTACCAGGAG+TGG + chr6_4:80437213-80437232 None:intergenic 35.0%
GTGGATGAGTTATAATTACC+AGG + chr6_4:80437218-80437237 None:intergenic 35.0%
!! TAGGAGTGTTGTAATGACAT+TGG - chr6_4:80437931-80437950 Msa0998940:intron 35.0%
!!! GTTGTTTTTTCTATGGTTGG+AGG + chr6_4:80437992-80438011 None:intergenic 35.0%
!!! GGTGTTGTTTTTTCTATGGT+TGG + chr6_4:80437995-80438014 None:intergenic 35.0%
ACCATAGAAAAAACAACACC+CGG - chr6_4:80437995-80438014 Msa0998940:intron 35.0%
CCAATGTAATGCTTTCATGT+TGG + chr6_4:80438275-80438294 None:intergenic 35.0%
!! CCAACATGAAAGCATTACAT+TGG - chr6_4:80438272-80438291 Msa0998940:intron 35.0%
!! TTTGACTCGGAGAATCTTTA+AGG - chr6_4:80438306-80438325 Msa0998940:intron 35.0%
TTCTTTCTATCCACAAGACT+CGG + chr6_4:80438340-80438359 None:intergenic 35.0%
! CTGCATCCTTTTACAATTTG+AGG - chr6_4:80438455-80438474 Msa0998940:intron 35.0%
! CCTTCACATGTTTAGTTCAA+TGG + chr6_4:80438566-80438585 None:intergenic 35.0%
CCATTGAACTAAACATGTGA+AGG - chr6_4:80438563-80438582 Msa0998940:intron 35.0%
AACTAAACATGTGAAGGCAA+TGG - chr6_4:80438569-80438588 Msa0998940:intron 35.0%
CACAACTATTATAGCAGACA+AGG + chr6_4:80438644-80438663 None:intergenic 35.0%
CTTGTCTGCTATAATAGTTG+TGG - chr6_4:80438642-80438661 Msa0998940:CDS 35.0%
ATTGTTATACACATGGAGGA+TGG + chr6_4:80438696-80438715 None:intergenic 35.0%
CAACATTGTTATACACATGG+AGG + chr6_4:80438700-80438719 None:intergenic 35.0%
CACGAGTGTTAATATCATGT+CGG + chr6_4:80438849-80438868 None:intergenic 35.0%
TTGTGTAGCATTACTCTGTA+TGG + chr6_4:80439008-80439027 None:intergenic 35.0%
ATTCACCACAGTCAGTAAAT+TGG - chr6_4:80439280-80439299 Msa0998940:intron 35.0%
CGTTTGATCATCTTCATTCA+AGG + chr6_4:80439308-80439327 None:intergenic 35.0%
! TAGTAAAACTATAGGGTGCT+AGG - chr6_4:80439423-80439442 Msa0998940:intron 35.0%
CAATCTATCTTTAAGTGGGA+AGG + chr6_4:80439480-80439499 None:intergenic 35.0%
!! GGCACCTAGTTCTATACTTT+GGG + chr6_4:80437069-80437088 None:intergenic 40.0%
!! TGGCACCTAGTTCTATACTT+TGG + chr6_4:80437070-80437089 None:intergenic 40.0%
TTGAGTTTCTCTATGTGTGG+TGG + chr6_4:80437119-80437138 None:intergenic 40.0%
! GCTTTGAGTTTCTCTATGTG+TGG + chr6_4:80437122-80437141 None:intergenic 40.0%
ACTGCGTAATGAAGCTTTCA+TGG + chr6_4:80437144-80437163 None:intergenic 40.0%
GATGCATTGAGTAGTTGGTT+AGG + chr6_4:80437191-80437210 None:intergenic 40.0%
! GTAATGACATTGGTAGCCAA+TGG - chr6_4:80437941-80437960 Msa0998940:intron 40.0%
! ACATTGGTAGCCAATGGAAA+AGG - chr6_4:80437947-80437966 Msa0998940:intron 40.0%
!!! TCCGGGTGTTGTTTTTTCTA+TGG + chr6_4:80437999-80438018 None:intergenic 40.0%
TCAAATTCAGATTCTCGTCC+GGG + chr6_4:80438016-80438035 None:intergenic 40.0%
GTCAAATTCAGATTCTCGTC+CGG + chr6_4:80438017-80438036 None:intergenic 40.0%
!! TCGGAGAATCTTTAAGGTCT+TGG - chr6_4:80438312-80438331 Msa0998940:intron 40.0%
!! CGGAGAATCTTTAAGGTCTT+GGG - chr6_4:80438313-80438332 Msa0998940:intron 40.0%
ATGTCCGTCTAAGAACCTAA+CGG + chr6_4:80438366-80438385 None:intergenic 40.0%
GCTATAATAGTTGTGGTCAC+TGG - chr6_4:80438649-80438668 Msa0998940:CDS 40.0%
!!! AGGTTTTGAACTATGACGCA+TGG + chr6_4:80438931-80438950 None:intergenic 40.0%
TGTAGCATTACTCTGTATGG+TGG + chr6_4:80439005-80439024 None:intergenic 40.0%
! GTGTTGATGAAAGTGATACC+TGG - chr6_4:80439062-80439081 Msa0998940:intron 40.0%
GCAATATCAACTGTCATTCC+AGG + chr6_4:80439083-80439102 None:intergenic 40.0%
TTCCTCTCAATTGCATGCAA+TGG + chr6_4:80439181-80439200 None:intergenic 40.0%
TGCATGCAATTGAGAGGAAA+TGG - chr6_4:80439182-80439201 Msa0998940:intron 40.0%
! AGGTTCCAATTTACTGACTG+TGG + chr6_4:80439288-80439307 None:intergenic 40.0%
TCTATCTTTAAGTGGGAAGG+AGG + chr6_4:80439477-80439496 None:intergenic 40.0%
TCTCTATGTGTGGTGGCAAT+TGG + chr6_4:80437112-80437131 None:intergenic 45.0%
GAGTGGATGCATTGAGTAGT+TGG + chr6_4:80437196-80437215 None:intergenic 45.0%
! TTGGTAGCCAATGGAAAAGG+TGG - chr6_4:80437950-80437969 Msa0998940:intron 45.0%
! CAAACCACCACCTTTTCCAT+TGG + chr6_4:80437960-80437979 None:intergenic 45.0%
! TGGAAAAGGTGGTGGTTTGT+TGG - chr6_4:80437961-80437980 Msa0998940:intron 45.0%
GGATAGAAAGAATGCCCGTT+AGG - chr6_4:80438348-80438367 Msa0998940:intron 45.0%
ATGCCCGTTAGGTTCTTAGA+CGG - chr6_4:80438359-80438378 Msa0998940:intron 45.0%
TGTCCGTCTAAGAACCTAAC+GGG + chr6_4:80438365-80438384 None:intergenic 45.0%
GACCATTGCATGCAATTGAG+AGG - chr6_4:80439176-80439195 Msa0998940:intron 45.0%
AGTTCAATTGAGCCAGCTGA+TGG - chr6_4:80439212-80439231 Msa0998940:intron 45.0%
CTGATTGATTGACTGCGATG+AGG - chr6_4:80439394-80439413 Msa0998940:intron 45.0%
CTACTCAATGCATCCACTCC+TGG - chr6_4:80437197-80437216 Msa0998940:three_prime_UTR 50.0%
GTAGCCAATGGAAAAGGTGG+TGG - chr6_4:80437953-80437972 Msa0998940:intron 50.0%
TCAATTGAGCCAGCTGATGG+TGG - chr6_4:80439215-80439234 Msa0998940:intron 50.0%
ACTCAACAACCACCATCAGC+TGG + chr6_4:80439227-80439246 None:intergenic 50.0%
! TACTGACTGTGGTGAATGCG+AGG + chr6_4:80439277-80439296 None:intergenic 50.0%
AAGTGGGAAGGAGGACACCA+TGG + chr6_4:80439468-80439487 None:intergenic 55.0%
GGTCTTGGGTCCGAGTCTTG+TGG - chr6_4:80438327-80438346 Msa0998940:intron 60.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 80436957 80439685 80436957 ID=Msa0998940;Name=Msa0998940
chr6_4 mRNA 80436957 80439685 80436957 ID=Msa0998940-mRNA-1;Parent=Msa0998940;Name=Msa0998940-mRNA-1;_AED=0.01;_eAED=0.01;_QI=48|1|1|1|1|1|3|441|206
chr6_4 exon 80436957 80437659 80436957 ID=Msa0998940-mRNA-1:exon:15271;Parent=Msa0998940-mRNA-1
chr6_4 exon 80438601 80438745 80438601 ID=Msa0998940-mRNA-1:exon:15270;Parent=Msa0998940-mRNA-1
chr6_4 exon 80439424 80439685 80439424 ID=Msa0998940-mRNA-1:exon:15269;Parent=Msa0998940-mRNA-1
chr6_4 five_prime_UTR 80439638 80439685 80439638 ID=Msa0998940-mRNA-1:five_prime_utr;Parent=Msa0998940-mRNA-1
chr6_4 CDS 80439424 80439637 80439424 ID=Msa0998940-mRNA-1:cds;Parent=Msa0998940-mRNA-1
chr6_4 CDS 80438601 80438745 80438601 ID=Msa0998940-mRNA-1:cds;Parent=Msa0998940-mRNA-1
chr6_4 CDS 80437398 80437659 80437398 ID=Msa0998940-mRNA-1:cds;Parent=Msa0998940-mRNA-1
chr6_4 three_prime_UTR 80436957 80437397 80436957 ID=Msa0998940-mRNA-1:three_prime_utr;Parent=Msa0998940-mRNA-1
Gene Sequence

>Msa0998940

ATGTCACCCCAAAAAAAAATCAACATAGTAAAACGACAAGACAACATTACATTATTTTACTCCCAAAGTATAGAACTAGGTGCCACATCTTGCCATTATTATTTCCAATTGCCACCACACATAGAGAAACTCAAAGCCATGAAAGCTTCATTACGCAGTGCTACTCCACTTGCTCTAATTTCACCTAACCAACTACTCAATGCATCCACTCCTGGTGATAAATATTTTGGTTTCAAATATGGCAAAGATAGGAGTGTTGTAATGACATTGGTAGCCAATGGAAAAGGTGGTGGTTTGTTGGACAAGCCTCCAACCATAGAAAAAACAACACCCGGACGAGAATCTGAATTTGACTTAAGGAAATCAAAAAAGACATCTCCACCATACAGAGTAATGCTACACAATGACAACTATAACAAAAGAGAATATGTTGTGCAAGTGTTGATGAAAGTGATACCTGGAATGACAGTTGATATTGCAGTTAACGTCATGCAAGAAGCACATATTAATGGATTAGCAGTGGTCATTATTTGTGCTCAAGTTGATGCTGAAGACCATTGCATGCAATTGAGAGGAAATGGTCTTTTAAGTTCAATTGAGCCAGCTGATGGTGGTTGTTGA

Protein sequence

>Msa0998940

MSPQKKINIVKRQDNITLFYSQSIELGATSCHYYFQLPPHIEKLKAMKASLRSATPLALISPNQLLNASTPGDKYFGFKYGKDRSVVMTLVANGKGGGLLDKPPTIEKTTPGRESEFDLRKSKKTSPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVMQEAHINGLAVVIICAQVDAEDHCMQLRGNGLLSSIEPADGGC*