AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0520810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0520810 MtrunA17_Chr3g0136771 95.471 552 25 0 1 552 1 552 0.0 1079
Msa0520810 MtrunA17_Chr4g0027961 28.918 453 260 16 96 519 90 509 5.31e-54 191
Msa0520810 MtrunA17_Chr8g0378671 27.938 451 252 11 84 503 67 475 2.13e-47 173
Msa0520810 MtrunA17_Chr8g0378721 26.600 500 289 13 84 549 67 522 5.09e-46 169
Msa0520810 MtrunA17_Chr8g0378701 30.094 319 195 7 84 380 81 393 1.23e-39 149
Msa0520810 MtrunA17_Chr1g0159921 26.176 340 205 14 99 421 210 520 1.47e-20 95.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0520810 AT2G24820.1 78.004 491 102 4 64 552 53 539 0.0 796
Msa0520810 AT3G44880.1 28.014 564 303 21 6 533 22 518 1.48e-50 182
Msa0520810 AT4G25650.1 26.371 474 278 14 96 535 79 515 1.10e-43 163
Msa0520810 AT4G25650.2 25.150 501 273 15 96 535 79 538 4.52e-40 153
Msa0520810 AT1G44446.4 25.959 339 207 14 99 421 116 426 4.82e-23 102
Msa0520810 AT1G44446.1 25.959 339 207 14 99 421 218 528 1.53e-22 101
Msa0520810 AT1G44446.2 27.076 277 164 12 99 361 218 470 3.06e-20 94.4
Msa0520810 AT1G44446.3 29.944 177 109 6 99 270 218 384 5.52e-17 84.0

Find 157 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATATCTATTTGCTAAATT+TGG 0.091375 3_4:-73347076 None:intergenic
CTTTCAAAAGAATTTCATTT+TGG 0.099582 3_4:-73346823 None:intergenic
TGAATACAACAAACTTTATT+AGG 0.168312 3_4:+73347296 Msa0520810:CDS
TTTACCTTAAAATGAAAATT+TGG 0.181657 3_4:-73344678 None:intergenic
TTTGGCTTAAATAACATAAA+TGG 0.195114 3_4:-73347418 None:intergenic
GCATTGGCAATTCTTGTATC+TGG 0.209307 3_4:+73347193 Msa0520810:CDS
GGGATTCTCAAGGTGTTATT+TGG 0.225677 3_4:+73346273 Msa0520810:CDS
CACGGGATGCCATATCATTT+TGG 0.253652 3_4:+73346935 Msa0520810:CDS
TACAGTTTGTATTATAGTTT+TGG 0.253843 3_4:+73347376 Msa0520810:three_prime_UTR
TCAGTGGTCTGTTCCTTTGT+AGG 0.259166 3_4:+73346660 Msa0520810:CDS
ATTTAGCAAATAGATATTTC+AGG 0.298772 3_4:+73347080 Msa0520810:CDS
CTTGTGTTCTACAAAATAAC+AGG 0.302734 3_4:+73346603 Msa0520810:CDS
TATTCTACTGGAAAACTTGA+TGG 0.338578 3_4:+73346412 Msa0520810:CDS
TCAGGAAACAGTTTCACTAT+TGG 0.342040 3_4:-73346740 None:intergenic
ATGCAAAGCAAAATGAGTTT+TGG 0.346312 3_4:-73344857 None:intergenic
GCACCTGCTGGACTTGTTGC+AGG 0.354157 3_4:+73347004 Msa0520810:CDS
CCATTCCTCTTTCCAATCAT+AGG 0.358558 3_4:-73345109 None:intergenic
GGATTCTCAAGGTGTTATTT+GGG 0.369826 3_4:+73346274 Msa0520810:CDS
TCAACTACAGCAGGCTCTTT+AGG 0.377075 3_4:-73346977 None:intergenic
CTGTTCCTTTGTAGGCCAAC+TGG 0.383836 3_4:+73346668 Msa0520810:CDS
AGTCCAAAGGAGTATTTGTT+TGG 0.385986 3_4:-73344896 None:intergenic
TTCTGATGGAAGTACCATTC+AGG 0.391509 3_4:-73346758 None:intergenic
GCCTAACTTCTTACGGTTTG+AGG 0.395482 3_4:+73346577 Msa0520810:CDS
GTTGAGATTGAAACTGAAAC+TGG 0.401389 3_4:-73344929 None:intergenic
CGAACTGATAGAGGGTTTGC+AGG 0.406206 3_4:+73346524 Msa0520810:CDS
AGTAGAATAGAATGATCATA+TGG 0.408492 3_4:-73346398 None:intergenic
ATATGATCATTCTATTCTAC+TGG 0.410613 3_4:+73346400 Msa0520810:CDS
TCTGAAGGCCAGTTGATTGA+TGG 0.416371 3_4:+73346027 Msa0520810:CDS
CTCAAGGTGTTATTTGGGTA+TGG 0.419926 3_4:+73346279 Msa0520810:CDS
TCCATGCTGATAGTGAGGTT+TGG 0.420466 3_4:+73346701 Msa0520810:CDS
ACCCCTGCGTTCTTGCTCAC+TGG 0.427222 3_4:-73345070 None:intergenic
GGCTGTTGCGTTAGCTGCAT+TGG 0.431876 3_4:+73347177 Msa0520810:CDS
CCAAGTTTGAAAAGCTTTGA+CGG 0.431998 3_4:-73347134 None:intergenic
GTGCTGTGACCAAAATGATA+TGG 0.432114 3_4:-73346944 None:intergenic
GAGAACTTGCAGCCTATGAT+TGG 0.435775 3_4:+73345097 Msa0520810:CDS
CATCCAAACAAATACTCCTT+TGG 0.438298 3_4:+73344893 Msa0520810:CDS
TAGAGGGTTTGCAGGTTGGT+GGG 0.438638 3_4:+73346532 Msa0520810:CDS
GCTGCATCAACTGTACTTGA+TGG 0.444392 3_4:+73345015 Msa0520810:CDS
CAAGCCTTCCATCAATCAAC+TGG 0.448979 3_4:-73346035 None:intergenic
CGAATTGCCATCCATGATAC+AGG 0.448989 3_4:-73346062 None:intergenic
AACAATGTCTTCCGATGAAA+AGG 0.450694 3_4:+73347466 Msa0520810:three_prime_UTR
TCTGTTCTATCATGCGAGAT+TGG 0.453393 3_4:-73346449 None:intergenic
TTCAGGTATAGTTCCTTTGT+CGG 0.454673 3_4:-73346854 None:intergenic
TGTCTGATGATCTTAAATTC+AGG 0.456895 3_4:-73346871 None:intergenic
CAAAGGAGTATTTGTTTGGA+TGG 0.457186 3_4:-73344892 None:intergenic
CTGATAGAGGGTTTGCAGGT+TGG 0.459478 3_4:+73346528 Msa0520810:CDS
CGCAACAGCCACAGCCGAAA+GGG 0.460635 3_4:-73347164 None:intergenic
GTACTAAGCCTAACTTCTTA+CGG 0.464513 3_4:+73346570 Msa0520810:CDS
ATGGATTTCCCTTGTCCAGT+TGG 0.465078 3_4:-73346683 None:intergenic
TCTGCATCCCTATGCTCTGT+TGG 0.465909 3_4:+73347244 Msa0520810:CDS
AAACCTTGCTTGCATTCTGA+TGG 0.468051 3_4:-73346772 None:intergenic
TTGAAACTGAAACTGGAAGA+TGG 0.472271 3_4:-73344922 None:intergenic
ATAGAGGGTTTGCAGGTTGG+TGG 0.475534 3_4:+73346531 Msa0520810:CDS
GCCTCAAACCGTAAGAAGTT+AGG 0.477957 3_4:-73346578 None:intergenic
CTGTAAGTGTTCGATTGAAA+AGG 0.479508 3_4:-73347358 None:intergenic
TTTGAGAACTTTGCAAGGCC+AGG 0.480628 3_4:+73346344 Msa0520810:CDS
TCAGCTTCCTCACCTGCAAA+GGG 0.482663 3_4:+73347031 Msa0520810:CDS
CTTTGTAGGCCAACTGGACA+AGG 0.485841 3_4:+73346674 Msa0520810:CDS
ACACATGGGTTGCTGAATAC+AGG 0.486315 3_4:+73346891 Msa0520810:CDS
CATTGGCAATTCTTGTATCT+GGG 0.491960 3_4:+73347194 Msa0520810:CDS
ATAGGGATGCAGATGCCAAC+AGG 0.493759 3_4:-73347234 None:intergenic
GTGACAGAACGAACTGATAG+AGG 0.493826 3_4:+73346515 Msa0520810:CDS
TAGTGAAACTGTTTCCTGAA+TGG 0.500632 3_4:+73346744 Msa0520810:CDS
CTGCATCAACTGTACTTGAT+GGG 0.506544 3_4:+73345016 Msa0520810:CDS
GTAGTTGAACATGCACCTGC+TGG 0.507696 3_4:+73346992 Msa0520810:CDS
AGAGGGTTTGCAGGTTGGTG+GGG 0.507806 3_4:+73346533 Msa0520810:CDS
ATCAGCTTCCTCACCTGCAA+AGG 0.509289 3_4:+73347030 Msa0520810:CDS
ACGCAACAGCCACAGCCGAA+AGG 0.521750 3_4:-73347165 None:intergenic
TGCGAGATTGGAATATGAGC+AGG 0.522604 3_4:-73346437 None:intergenic
CATTCTTAGTGAGGTACAAA+GGG 0.524490 3_4:-73345134 None:intergenic
TTCAGTTTCAATCTCAACAA+AGG 0.530425 3_4:+73344934 Msa0520810:CDS
ATGAAGATCGGTGTCCTCAC+AGG 0.535900 3_4:+73345241 Msa0520810:CDS
GAAAGAGAAGGTTCCGACAA+AGG 0.535987 3_4:+73346841 Msa0520810:CDS
TTGATTTCACTCCATGGCGT+TGG 0.537003 3_4:+73344813 Msa0520810:exon
AGCTTCCTCACCTGCAAAGG+GGG 0.537835 3_4:+73347033 Msa0520810:CDS
AGGCTTGAATGCCTGTATCA+TGG 0.538330 3_4:+73346051 Msa0520810:CDS
TGAAACTGAAACTGGAAGAT+GGG 0.541256 3_4:-73344921 None:intergenic
ATGCTGATAGTGAGGTTTGG+AGG 0.541567 3_4:+73346704 Msa0520810:CDS
TTGAGAACTTTGCAAGGCCA+GGG 0.544089 3_4:+73346345 Msa0520810:CDS
CTGCGTTCTTGCTCACTGGA+AGG 0.546061 3_4:-73345066 None:intergenic
CTTGTCCAGTTGGCCTACAA+AGG 0.550809 3_4:-73346673 None:intergenic
AGGAGTATTTGTTTGGATGG+TGG 0.552067 3_4:-73344889 None:intergenic
GTACCACACGATGCACCACT+TGG 0.552643 3_4:+73345156 Msa0520810:CDS
CAAATGTCAGTAAAATACCT+TGG 0.554742 3_4:+73346321 Msa0520810:CDS
ACATTCTTAGTGAGGTACAA+AGG 0.557836 3_4:-73345135 None:intergenic
ATACGCTCCAACAGAGCATA+GGG 0.559167 3_4:-73347251 None:intergenic
TTCTTGTATCTGGGAGACAA+TGG 0.561754 3_4:+73347203 Msa0520810:CDS
CATACGCTCCAACAGAGCAT+AGG 0.563760 3_4:-73347252 None:intergenic
GTTTGTTGTATTCAATGCAA+TGG 0.564073 3_4:-73347287 None:intergenic
TGCCATCTTTAAACAAAACA+AGG 0.564133 3_4:-73345200 None:intergenic
AGTCCTGCAACAAGTCCAGC+AGG 0.564418 3_4:-73347007 None:intergenic
CAAACTTTATTAGGACACAT+AGG 0.568168 3_4:+73347305 Msa0520810:CDS
TCTCGCATGATAGAACAGAT+TGG 0.569347 3_4:+73346453 Msa0520810:CDS
TACCTCTTGATTTCACTCCA+TGG 0.570579 3_4:+73344807 Msa0520810:exon
GGATGGCAATTCGAAGGCGA+AGG 0.570725 3_4:+73346072 Msa0520810:CDS
AGATTCAATGCTATGAAGAT+CGG 0.573811 3_4:+73345229 Msa0520810:CDS
TCAAGCAGAAGAAAGCATGC+AGG 0.578242 3_4:+73344964 Msa0520810:CDS
GGTGCATGTTCAACTACAGC+AGG 0.578727 3_4:-73346986 None:intergenic
CTTCCATCAGAATGCAAGCA+AGG 0.579730 3_4:+73346769 Msa0520810:CDS
GTTGAAACATCTTGAAACCC+TGG 0.581335 3_4:-73346362 None:intergenic
CTTGCAAAGTTCTCAAACCA+AGG 0.582584 3_4:-73346338 None:intergenic
AGAAGATCAGAAAGTTCTAG+TGG 0.585811 3_4:+73345041 Msa0520810:CDS
GGGTTGCTGAATACAGGAAG+TGG 0.586558 3_4:+73346897 Msa0520810:CDS
GTCTTCCGATGAAAAGGTCA+TGG 0.587508 3_4:+73347472 Msa0520810:three_prime_UTR
TCCAAACCTCACTATCAGCA+TGG 0.589532 3_4:-73346702 None:intergenic
TTCCAGTGAGCAAGAACGCA+GGG 0.590208 3_4:+73345068 Msa0520810:CDS
TGGAAGATGGGTTAGTCCAA+AGG 0.593475 3_4:-73344909 None:intergenic
TGGATGGACAAAGTGGGACA+CGG 0.594552 3_4:+73346917 Msa0520810:CDS
CCTATGATTGGAAAGAGGAA+TGG 0.595339 3_4:+73345109 Msa0520810:CDS
TGTTAAAACATATGAAGTGA+GGG 0.595344 3_4:+73346253 Msa0520810:CDS
TACAGCAGGCTCTTTAGGCA+AGG 0.595665 3_4:-73346972 None:intergenic
CGCCATGGAGTGAAATCAAG+AGG 0.599770 3_4:-73344809 None:intergenic
GTAGAATAGAATGATCATAT+GGG 0.601415 3_4:-73346397 None:intergenic
TGCAGCCTATGATTGGAAAG+AGG 0.602118 3_4:+73345104 Msa0520810:CDS
TATCATGGATGGCAATTCGA+AGG 0.603135 3_4:+73346066 Msa0520810:CDS
AAGGCCAGTTGATTGATGGA+AGG 0.603495 3_4:+73346031 Msa0520810:CDS
AGTATTTGTTTGGATGGTGG+AGG 0.603781 3_4:-73344886 None:intergenic
CTTGGTTTGAGAACTTTGCA+AGG 0.608245 3_4:+73346339 Msa0520810:CDS
ATTTAAGATCATCAGACACA+TGG 0.611628 3_4:+73346876 Msa0520810:CDS
TGCTGAATACAGGAAGTGGA+TGG 0.613748 3_4:+73346901 Msa0520810:CDS
AAATGGATTTACCAACGCCA+TGG 0.614476 3_4:-73344824 None:intergenic
CTTCCAGTGAGCAAGAACGC+AGG 0.616535 3_4:+73345067 Msa0520810:CDS
TGCATCAACTGTACTTGATG+GGG 0.616664 3_4:+73345017 Msa0520810:CDS
TGCAGGGTATGTCACCGCCA+CGG 0.619960 3_4:+73344981 Msa0520810:CDS
GGATGGACAAAGTGGGACAC+GGG 0.620612 3_4:+73346918 Msa0520810:CDS
GGTGAAATAAACTACTTCAG+TGG 0.621651 3_4:+73346644 Msa0520810:CDS
CAAGCAGAAGAAAGCATGCA+GGG 0.625644 3_4:+73344965 Msa0520810:CDS
GTGTTAAAACATATGAAGTG+AGG 0.626515 3_4:+73346252 Msa0520810:CDS
GATGGCAATTCGAAGGCGAA+GGG 0.627130 3_4:+73346073 Msa0520810:CDS
AGGTTAGCAAAACTATCTGA+AGG 0.627154 3_4:+73346012 Msa0520810:intron
ACAATGGAAAGTCCTCCTGT+TGG 0.632385 3_4:+73347219 Msa0520810:CDS
CAGGAAGTGGATGGACAAAG+TGG 0.633627 3_4:+73346910 Msa0520810:CDS
TGGTCTGCCAGAAAAGCCTA+CGG 0.635054 3_4:+73347492 Msa0520810:three_prime_UTR
GAAAGAGAACAATAGACCGT+AGG 0.638406 3_4:-73347508 None:intergenic
TTTAAGATCATCAGACACAT+GGG 0.641224 3_4:+73346877 Msa0520810:CDS
GCTTCCTCACCTGCAAAGGG+GGG 0.641330 3_4:+73347034 Msa0520810:CDS
GAAATGTGTGAAGATACCTC+AGG 0.642067 3_4:+73346095 Msa0520810:CDS
TGACAGAACGAACTGATAGA+GGG 0.642389 3_4:+73346516 Msa0520810:CDS
TGCAGCTTTGACATCTGCCG+TGG 0.643956 3_4:-73344998 None:intergenic
TTGAATGCCTGTATCATGGA+TGG 0.646528 3_4:+73346055 Msa0520810:CDS
AGCTTTGACATCTGCCGTGG+CGG 0.646677 3_4:-73344995 None:intergenic
GGAAATCCATGCTGATAGTG+AGG 0.648025 3_4:+73346696 Msa0520810:CDS
GAAGATCAGAAAGTTCTAGT+GGG 0.652494 3_4:+73345042 Msa0520810:CDS
TTTGTAGGCCAACTGGACAA+GGG 0.655506 3_4:+73346675 Msa0520810:CDS
CGTGTGGTACATTCTTAGTG+AGG 0.668970 3_4:-73345143 None:intergenic
TCAAACACTGTGAGACCAAG+TGG 0.669069 3_4:-73345171 None:intergenic
AGGAAGTGGATGGACAAAGT+GGG 0.674817 3_4:+73346911 Msa0520810:CDS
CAGCTTCCTCACCTGCAAAG+GGG 0.676647 3_4:+73347032 Msa0520810:CDS
TATGAAGTGAGGGATTCTCA+AGG 0.679527 3_4:+73346263 Msa0520810:CDS
TTGTGTTCTACAAAATAACA+GGG 0.682628 3_4:+73346604 Msa0520810:CDS
AGACCAAGTGGTGCATCGTG+TGG 0.684416 3_4:-73345159 None:intergenic
TGGTGGGGACGAGAGAAAGA+CGG 0.685767 3_4:+73346548 Msa0520810:CDS
GGGATGCAGATGCCAACAGG+AGG 0.688384 3_4:-73347231 None:intergenic
TAAATTAAAACTAACCTGTG+AGG 0.697625 3_4:-73345255 None:intergenic
TCCAGTGAGCAAGAACGCAG+GGG 0.708243 3_4:+73345069 Msa0520810:CDS
AGTTTGAAAAGCTTTGACGG+CGG 0.714074 3_4:-73347131 None:intergenic
GTAGTACTAGAAACTGATCG+AGG 0.751550 3_4:-73344787 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTACCTTAAAATGAAAATT+TGG - chr3_4:73344681-73344700 None:intergenic 15.0%
!! ATTTGTAAGTAATTGAAATT+GGG - chr3_4:73345811-73345830 None:intergenic 15.0%
!! AATTTGTAAGTAATTGAAAT+TGG - chr3_4:73345812-73345831 None:intergenic 15.0%
!!! TTTCAAAAGAATTTCATTTT+GGG - chr3_4:73346825-73346844 None:intergenic 15.0%
!!! AAATATCTATTTGCTAAATT+TGG - chr3_4:73347079-73347098 None:intergenic 15.0%
!! TCAATCATAAGAATAATTAG+AGG - chr3_4:73345286-73345305 None:intergenic 20.0%
!! AATTATGAACTCTTACTTAT+GGG - chr3_4:73345340-73345359 None:intergenic 20.0%
!! TCTATTTAGGAATAAGATAT+TGG + chr3_4:73345580-73345599 Msa0520810:intron 20.0%
!! ATTGGTATTAATAAAGTTAG+TGG + chr3_4:73345598-73345617 Msa0520810:intron 20.0%
!! TTAATATTTGTATCTTTCCT+AGG + chr3_4:73345746-73345765 Msa0520810:intron 20.0%
!! ACATACTATCATTATTCATT+AGG - chr3_4:73345788-73345807 None:intergenic 20.0%
!!! CTTTCAAAAGAATTTCATTT+TGG - chr3_4:73346826-73346845 None:intergenic 20.0%
!! ATTTAGCAAATAGATATTTC+AGG + chr3_4:73347080-73347099 Msa0520810:CDS 20.0%
!! TGAATACAACAAACTTTATT+AGG + chr3_4:73347296-73347315 Msa0520810:CDS 20.0%
!!! TACAGTTTGTATTATAGTTT+TGG + chr3_4:73347376-73347395 Msa0520810:three_prime_UTR 20.0%
!!! TTTGGCTTAAATAACATAAA+TGG - chr3_4:73347421-73347440 None:intergenic 20.0%
!!! TTTTTCTTCTATTCATTGTT+TGG - chr3_4:73347439-73347458 None:intergenic 20.0%
!! GTGTCCAAATTTTCATTTTA+AGG + chr3_4:73344674-73344693 Msa0520810:five_prime_UTR 25.0%
!! AAAGAATCAGCAATATTTTG+TGG + chr3_4:73344699-73344718 Msa0520810:five_prime_UTR 25.0%
!! AAGAAAGAAGAGATACTTTT+AGG - chr3_4:73344765-73344784 None:intergenic 25.0%
!!! AACCTTGTTTTGTTTAAAGA+TGG + chr3_4:73345198-73345217 Msa0520810:CDS 25.0%
! TAAATTAAAACTAACCTGTG+AGG - chr3_4:73345258-73345277 None:intergenic 25.0%
! CAATTATGAACTCTTACTTA+TGG - chr3_4:73345341-73345360 None:intergenic 25.0%
! AAAAAATAAACCCGAACATT+AGG - chr3_4:73345483-73345502 None:intergenic 25.0%
! AGATCTATATTGCTCTATTT+AGG + chr3_4:73345567-73345586 Msa0520810:intron 25.0%
! ATAAATATTCTCACGTTAAC+TGG + chr3_4:73345873-73345892 Msa0520810:intron 25.0%
! ATCAAACCATCTAAATTGAT+TGG + chr3_4:73345915-73345934 Msa0520810:intron 25.0%
! CCTGAATCATGTAAAATATA+AGG - chr3_4:73345995-73346014 None:intergenic 25.0%
!! CCTTATATTTTACATGATTC+AGG + chr3_4:73345992-73346011 Msa0520810:intron 25.0%
! TATAAGGACATTCATGATAT+AGG - chr3_4:73346149-73346168 None:intergenic 25.0%
! ATATCATGAATGTCCTTATA+TGG + chr3_4:73346149-73346168 Msa0520810:intron 25.0%
! TGTTAAAACATATGAAGTGA+GGG + chr3_4:73346253-73346272 Msa0520810:CDS 25.0%
! GTAGAATAGAATGATCATAT+GGG - chr3_4:73346400-73346419 None:intergenic 25.0%
! AGTAGAATAGAATGATCATA+TGG - chr3_4:73346401-73346420 None:intergenic 25.0%
! ATATGATCATTCTATTCTAC+TGG + chr3_4:73346400-73346419 Msa0520810:CDS 25.0%
! TTGTGTTCTACAAAATAACA+GGG + chr3_4:73346604-73346623 Msa0520810:CDS 25.0%
! AGGGAAATTGTAGATAAAAA+TGG + chr3_4:73346623-73346642 Msa0520810:CDS 25.0%
!!! TGAAATTCTTTTGAAAGAGA+AGG + chr3_4:73346829-73346848 Msa0520810:CDS 25.0%
!! AAAGCAAAATGAGTTTTGGT+GGG - chr3_4:73344856-73344875 None:intergenic 30.0%
! ATGCAAAGCAAAATGAGTTT+TGG - chr3_4:73344860-73344879 None:intergenic 30.0%
TTCAGTTTCAATCTCAACAA+AGG + chr3_4:73344934-73344953 Msa0520810:CDS 30.0%
TGCCATCTTTAAACAAAACA+AGG - chr3_4:73345203-73345222 None:intergenic 30.0%
AGATTCAATGCTATGAAGAT+CGG + chr3_4:73345229-73345248 Msa0520810:CDS 30.0%
! TTGAGTTTGATTTCACATCA+TGG - chr3_4:73345510-73345529 None:intergenic 30.0%
ATGATGTGAAATCAAACTCA+AGG + chr3_4:73345509-73345528 Msa0520810:intron 30.0%
TCATTATCAGACAAACACAT+TGG - chr3_4:73345548-73345567 None:intergenic 30.0%
CAGTAGCAGTATTGTAAATA+AGG - chr3_4:73345656-73345675 None:intergenic 30.0%
TACTTGCCAATCAATTTAGA+TGG - chr3_4:73345924-73345943 None:intergenic 30.0%
! TTTTATTCCTTTCACAATGC+TGG + chr3_4:73345963-73345982 Msa0520810:intron 30.0%
TGTTAGCATCAAACCATATA+AGG - chr3_4:73346165-73346184 None:intergenic 30.0%
!!! CACTTCATATGTTTTAACAC+AGG - chr3_4:73346252-73346271 None:intergenic 30.0%
GTGTTAAAACATATGAAGTG+AGG + chr3_4:73346252-73346271 Msa0520810:CDS 30.0%
!! CAAGGTATTTTACTGACATT+TGG - chr3_4:73346323-73346342 None:intergenic 30.0%
CAAATGTCAGTAAAATACCT+TGG + chr3_4:73346321-73346340 Msa0520810:CDS 30.0%
TATTCTACTGGAAAACTTGA+TGG + chr3_4:73346412-73346431 Msa0520810:CDS 30.0%
!!! CTGTTATTTTGTAGAACACA+AGG - chr3_4:73346605-73346624 None:intergenic 30.0%
CTTGTGTTCTACAAAATAAC+AGG + chr3_4:73346603-73346622 Msa0520810:CDS 30.0%
! AAGGTTTTTGAACAAGACAT+GGG + chr3_4:73346788-73346807 Msa0520810:CDS 30.0%
TGTCTGATGATCTTAAATTC+AGG - chr3_4:73346874-73346893 None:intergenic 30.0%
! ATTTAAGATCATCAGACACA+TGG + chr3_4:73346876-73346895 Msa0520810:CDS 30.0%
! TTTAAGATCATCAGACACAT+GGG + chr3_4:73346877-73346896 Msa0520810:CDS 30.0%
!! GTTTGTTGTATTCAATGCAA+TGG - chr3_4:73347290-73347309 None:intergenic 30.0%
CAAACTTTATTAGGACACAT+AGG + chr3_4:73347305-73347324 Msa0520810:CDS 30.0%
!!! TTATAGTTTTGGATGACATC+TGG + chr3_4:73347387-73347406 Msa0520810:three_prime_UTR 30.0%
!! AAGCAAAATGAGTTTTGGTG+GGG - chr3_4:73344855-73344874 None:intergenic 35.0%
!! CAAAGCAAAATGAGTTTTGG+TGG - chr3_4:73344857-73344876 None:intergenic 35.0%
!! CAAAGGAGTATTTGTTTGGA+TGG - chr3_4:73344895-73344914 None:intergenic 35.0%
CATCCAAACAAATACTCCTT+TGG + chr3_4:73344893-73344912 Msa0520810:CDS 35.0%
!! AGTCCAAAGGAGTATTTGTT+TGG - chr3_4:73344899-73344918 None:intergenic 35.0%
TGAAACTGAAACTGGAAGAT+GGG - chr3_4:73344924-73344943 None:intergenic 35.0%
TTGAAACTGAAACTGGAAGA+TGG - chr3_4:73344925-73344944 None:intergenic 35.0%
GTTGAGATTGAAACTGAAAC+TGG - chr3_4:73344932-73344951 None:intergenic 35.0%
! AGAAGATCAGAAAGTTCTAG+TGG + chr3_4:73345041-73345060 Msa0520810:CDS 35.0%
! GAAGATCAGAAAGTTCTAGT+GGG + chr3_4:73345042-73345061 Msa0520810:CDS 35.0%
CATTCTTAGTGAGGTACAAA+GGG - chr3_4:73345137-73345156 None:intergenic 35.0%
ACATTCTTAGTGAGGTACAA+AGG - chr3_4:73345138-73345157 None:intergenic 35.0%
AATCACATAGCATGCAACTT+TGG - chr3_4:73345370-73345389 None:intergenic 35.0%
TACTTAGTGCTCCTAATGTT+CGG + chr3_4:73345469-73345488 Msa0520810:intron 35.0%
AGGTTAGCAAAACTATCTGA+AGG + chr3_4:73346012-73346031 Msa0520810:intron 35.0%
!! GGATTCTCAAGGTGTTATTT+GGG + chr3_4:73346274-73346293 Msa0520810:CDS 35.0%
! GGTATTTTACTGACATTTGG+AGG - chr3_4:73346320-73346339 None:intergenic 35.0%
GTACTAAGCCTAACTTCTTA+CGG + chr3_4:73346570-73346589 Msa0520810:CDS 35.0%
GGTGAAATAAACTACTTCAG+TGG + chr3_4:73346644-73346663 Msa0520810:CDS 35.0%
TCAGGAAACAGTTTCACTAT+TGG - chr3_4:73346743-73346762 None:intergenic 35.0%
TAGTGAAACTGTTTCCTGAA+TGG + chr3_4:73346744-73346763 Msa0520810:CDS 35.0%
! CAAGGTTTTTGAACAAGACA+TGG + chr3_4:73346787-73346806 Msa0520810:CDS 35.0%
TTCAGGTATAGTTCCTTTGT+CGG - chr3_4:73346857-73346876 None:intergenic 35.0%
! CCAAGTTTGAAAAGCTTTGA+CGG - chr3_4:73347137-73347156 None:intergenic 35.0%
AACTTGGAAAAATGCCCTTT+CGG + chr3_4:73347150-73347169 Msa0520810:CDS 35.0%
CATTGGCAATTCTTGTATCT+GGG + chr3_4:73347194-73347213 Msa0520810:CDS 35.0%
CTGTAAGTGTTCGATTGAAA+AGG - chr3_4:73347361-73347380 None:intergenic 35.0%
AACAATGTCTTCCGATGAAA+AGG + chr3_4:73347466-73347485 Msa0520810:three_prime_UTR 35.0%
GTAGTACTAGAAACTGATCG+AGG - chr3_4:73344790-73344809 None:intergenic 40.0%
TACCTCTTGATTTCACTCCA+TGG + chr3_4:73344807-73344826 Msa0520810:exon 40.0%
! AAATGGATTTACCAACGCCA+TGG - chr3_4:73344827-73344846 None:intergenic 40.0%
! AGTATTTGTTTGGATGGTGG+AGG - chr3_4:73344889-73344908 None:intergenic 40.0%
!! AGGAGTATTTGTTTGGATGG+TGG - chr3_4:73344892-73344911 None:intergenic 40.0%
CTGCATCAACTGTACTTGAT+GGG + chr3_4:73345016-73345035 Msa0520810:CDS 40.0%
TGCATCAACTGTACTTGATG+GGG + chr3_4:73345017-73345036 Msa0520810:CDS 40.0%
CCATTCCTCTTTCCAATCAT+AGG - chr3_4:73345112-73345131 None:intergenic 40.0%
CCTATGATTGGAAAGAGGAA+TGG + chr3_4:73345109-73345128 Msa0520810:CDS 40.0%
ACTTAGTGCTCCTAATGTTC+GGG + chr3_4:73345470-73345489 Msa0520810:intron 40.0%
CATGAAAACTACTAGCACAG+GGG - chr3_4:73345836-73345855 None:intergenic 40.0%
CCATGAAAACTACTAGCACA+GGG - chr3_4:73345837-73345856 None:intergenic 40.0%
! CCTGTGCTAGTAGTTTTCAT+GGG + chr3_4:73345835-73345854 Msa0520810:intron 40.0%
TTGAATGCCTGTATCATGGA+TGG + chr3_4:73346055-73346074 Msa0520810:CDS 40.0%
TATCATGGATGGCAATTCGA+AGG + chr3_4:73346066-73346085 Msa0520810:CDS 40.0%
GAAATGTGTGAAGATACCTC+AGG + chr3_4:73346095-73346114 Msa0520810:CDS 40.0%
TATGAAGTGAGGGATTCTCA+AGG + chr3_4:73346263-73346282 Msa0520810:CDS 40.0%
!! GGGATTCTCAAGGTGTTATT+TGG + chr3_4:73346273-73346292 Msa0520810:CDS 40.0%
!! CTCAAGGTGTTATTTGGGTA+TGG + chr3_4:73346279-73346298 Msa0520810:CDS 40.0%
CTTGCAAAGTTCTCAAACCA+AGG - chr3_4:73346341-73346360 None:intergenic 40.0%
! CTTGGTTTGAGAACTTTGCA+AGG + chr3_4:73346339-73346358 Msa0520810:CDS 40.0%
GTTGAAACATCTTGAAACCC+TGG - chr3_4:73346365-73346384 None:intergenic 40.0%
TCTGTTCTATCATGCGAGAT+TGG - chr3_4:73346452-73346471 None:intergenic 40.0%
TCTCGCATGATAGAACAGAT+TGG + chr3_4:73346453-73346472 Msa0520810:CDS 40.0%
TCTGTCACCTCAAAAAGTAG+CGG - chr3_4:73346503-73346522 None:intergenic 40.0%
TGACAGAACGAACTGATAGA+GGG + chr3_4:73346516-73346535 Msa0520810:CDS 40.0%
!! TTCTGATGGAAGTACCATTC+AGG - chr3_4:73346761-73346780 None:intergenic 40.0%
AAACCTTGCTTGCATTCTGA+TGG - chr3_4:73346775-73346794 None:intergenic 40.0%
GTGCTGTGACCAAAATGATA+TGG - chr3_4:73346947-73346966 None:intergenic 40.0%
! AGTTTGAAAAGCTTTGACGG+CGG - chr3_4:73347134-73347153 None:intergenic 40.0%
! CCGTCAAAGCTTTTCAAACT+TGG + chr3_4:73347134-73347153 Msa0520810:CDS 40.0%
! GCATTGGCAATTCTTGTATC+TGG + chr3_4:73347193-73347212 Msa0520810:CDS 40.0%
TTCTTGTATCTGGGAGACAA+TGG + chr3_4:73347203-73347222 Msa0520810:CDS 40.0%
GAAAGAGAACAATAGACCGT+AGG - chr3_4:73347511-73347530 None:intergenic 40.0%
!! TACTTTTAGGTGCGTGTGTG+TGG - chr3_4:73344752-73344771 None:intergenic 45.0%
TTGATTTCACTCCATGGCGT+TGG + chr3_4:73344813-73344832 Msa0520810:exon 45.0%
!! GTTTTGGTGGGGAGAAGAAA+TGG - chr3_4:73344844-73344863 None:intergenic 45.0%
!! TGGAAGATGGGTTAGTCCAA+AGG - chr3_4:73344912-73344931 None:intergenic 45.0%
! TCAAGCAGAAGAAAGCATGC+AGG + chr3_4:73344964-73344983 Msa0520810:CDS 45.0%
! CAAGCAGAAGAAAGCATGCA+GGG + chr3_4:73344965-73344984 Msa0520810:CDS 45.0%
GCTGCATCAACTGTACTTGA+TGG + chr3_4:73345015-73345034 Msa0520810:CDS 45.0%
GAGAACTTGCAGCCTATGAT+TGG + chr3_4:73345097-73345116 Msa0520810:CDS 45.0%
TGCAGCCTATGATTGGAAAG+AGG + chr3_4:73345104-73345123 Msa0520810:CDS 45.0%
CGTGTGGTACATTCTTAGTG+AGG - chr3_4:73345146-73345165 None:intergenic 45.0%
TCAAACACTGTGAGACCAAG+TGG - chr3_4:73345174-73345193 None:intergenic 45.0%
ACAATACTGCTACTGCTGAC+AGG + chr3_4:73345661-73345680 Msa0520810:intron 45.0%
GTGAACTTAGTGACTGTCCT+AGG - chr3_4:73345766-73345785 None:intergenic 45.0%
! CCCTGTGCTAGTAGTTTTCA+TGG + chr3_4:73345834-73345853 Msa0520810:intron 45.0%
CCCATGAAAACTACTAGCAC+AGG - chr3_4:73345838-73345857 None:intergenic 45.0%
TTCCTTTCACAATGCTGGAC+TGG + chr3_4:73345968-73345987 Msa0520810:intron 45.0%
TCTGAAGGCCAGTTGATTGA+TGG + chr3_4:73346027-73346046 Msa0520810:CDS 45.0%
AAGGCCAGTTGATTGATGGA+AGG + chr3_4:73346031-73346050 Msa0520810:CDS 45.0%
CAAGCCTTCCATCAATCAAC+TGG - chr3_4:73346038-73346057 None:intergenic 45.0%
AGGCTTGAATGCCTGTATCA+TGG + chr3_4:73346051-73346070 Msa0520810:CDS 45.0%
CGAATTGCCATCCATGATAC+AGG - chr3_4:73346065-73346084 None:intergenic 45.0%
TGTGTGAAGATACCTCAGGT+AGG + chr3_4:73346099-73346118 Msa0520810:intron 45.0%
TAAAGTCAGTAGCCTACCTG+AGG - chr3_4:73346114-73346133 None:intergenic 45.0%
! CTGGGAATTTTTGCATCAGC+TGG - chr3_4:73346224-73346243 None:intergenic 45.0%
CAGCTGATGCAAAAATTCCC+AGG + chr3_4:73346222-73346241 Msa0520810:CDS 45.0%
!! GTTTTAACACAGGCTGACCT+GGG - chr3_4:73346242-73346261 None:intergenic 45.0%
!!! TGTTTTAACACAGGCTGACC+TGG - chr3_4:73346243-73346262 None:intergenic 45.0%
TTTGAGAACTTTGCAAGGCC+AGG + chr3_4:73346344-73346363 Msa0520810:CDS 45.0%
TTGAGAACTTTGCAAGGCCA+GGG + chr3_4:73346345-73346364 Msa0520810:CDS 45.0%
TGCGAGATTGGAATATGAGC+AGG - chr3_4:73346440-73346459 None:intergenic 45.0%
!!! TGCACAACCGCTACTTTTTG+AGG + chr3_4:73346493-73346512 Msa0520810:CDS 45.0%
GTGACAGAACGAACTGATAG+AGG + chr3_4:73346515-73346534 Msa0520810:CDS 45.0%
GCCTAACTTCTTACGGTTTG+AGG + chr3_4:73346577-73346596 Msa0520810:CDS 45.0%
GCCTCAAACCGTAAGAAGTT+AGG - chr3_4:73346581-73346600 None:intergenic 45.0%
TCAGTGGTCTGTTCCTTTGT+AGG + chr3_4:73346660-73346679 Msa0520810:CDS 45.0%
TTTGTAGGCCAACTGGACAA+GGG + chr3_4:73346675-73346694 Msa0520810:CDS 45.0%
ATGGATTTCCCTTGTCCAGT+TGG - chr3_4:73346686-73346705 None:intergenic 45.0%
! GGAAATCCATGCTGATAGTG+AGG + chr3_4:73346696-73346715 Msa0520810:CDS 45.0%
! TCCATGCTGATAGTGAGGTT+TGG + chr3_4:73346701-73346720 Msa0520810:CDS 45.0%
TCCAAACCTCACTATCAGCA+TGG - chr3_4:73346705-73346724 None:intergenic 45.0%
! ATGCTGATAGTGAGGTTTGG+AGG + chr3_4:73346704-73346723 Msa0520810:CDS 45.0%
CTTCCATCAGAATGCAAGCA+AGG + chr3_4:73346769-73346788 Msa0520810:CDS 45.0%
GAAAGAGAAGGTTCCGACAA+AGG + chr3_4:73346841-73346860 Msa0520810:CDS 45.0%
! ACACATGGGTTGCTGAATAC+AGG + chr3_4:73346891-73346910 Msa0520810:CDS 45.0%
TGCTGAATACAGGAAGTGGA+TGG + chr3_4:73346901-73346920 Msa0520810:CDS 45.0%
AGGAAGTGGATGGACAAAGT+GGG + chr3_4:73346911-73346930 Msa0520810:CDS 45.0%
! CACGGGATGCCATATCATTT+TGG + chr3_4:73346935-73346954 Msa0520810:CDS 45.0%
TCAACTACAGCAGGCTCTTT+AGG - chr3_4:73346980-73346999 None:intergenic 45.0%
ACAATGGAAAGTCCTCCTGT+TGG + chr3_4:73347219-73347238 Msa0520810:CDS 45.0%
ATACGCTCCAACAGAGCATA+GGG - chr3_4:73347254-73347273 None:intergenic 45.0%
GTCTTCCGATGAAAAGGTCA+TGG + chr3_4:73347472-73347491 Msa0520810:three_prime_UTR 45.0%
! GCAGACCATGACCTTTTCAT+CGG - chr3_4:73347480-73347499 None:intergenic 45.0%
! CAATAGACCGTAGGCTTTTC+TGG - chr3_4:73347502-73347521 None:intergenic 45.0%
CGCCATGGAGTGAAATCAAG+AGG - chr3_4:73344812-73344831 None:intergenic 50.0%
TTCCAGTGAGCAAGAACGCA+GGG + chr3_4:73345068-73345087 Msa0520810:CDS 50.0%
! ATGAAGATCGGTGTCCTCAC+AGG + chr3_4:73345241-73345260 Msa0520810:CDS 50.0%
ATACTGCTACTGCTGACAGG+AGG + chr3_4:73345664-73345683 Msa0520810:intron 50.0%
GTCCAGTCCAGCATTGTGAA+AGG - chr3_4:73345973-73345992 None:intergenic 50.0%
GATGGCAATTCGAAGGCGAA+GGG + chr3_4:73346073-73346092 Msa0520810:CDS 50.0%
CGAACTGATAGAGGGTTTGC+AGG + chr3_4:73346524-73346543 Msa0520810:CDS 50.0%
CTGATAGAGGGTTTGCAGGT+TGG + chr3_4:73346528-73346547 Msa0520810:CDS 50.0%
! ATAGAGGGTTTGCAGGTTGG+TGG + chr3_4:73346531-73346550 Msa0520810:CDS 50.0%
!! TAGAGGGTTTGCAGGTTGGT+GGG + chr3_4:73346532-73346551 Msa0520810:CDS 50.0%
CTGTTCCTTTGTAGGCCAAC+TGG + chr3_4:73346668-73346687 Msa0520810:CDS 50.0%
! CTTGTCCAGTTGGCCTACAA+AGG - chr3_4:73346676-73346695 None:intergenic 50.0%
CTTTGTAGGCCAACTGGACA+AGG + chr3_4:73346674-73346693 Msa0520810:CDS 50.0%
GGGTTGCTGAATACAGGAAG+TGG + chr3_4:73346897-73346916 Msa0520810:CDS 50.0%
CAGGAAGTGGATGGACAAAG+TGG + chr3_4:73346910-73346929 Msa0520810:CDS 50.0%
TGGATGGACAAAGTGGGACA+CGG + chr3_4:73346917-73346936 Msa0520810:CDS 50.0%
TACAGCAGGCTCTTTAGGCA+AGG - chr3_4:73346975-73346994 None:intergenic 50.0%
GGTGCATGTTCAACTACAGC+AGG - chr3_4:73346989-73347008 None:intergenic 50.0%
GTAGTTGAACATGCACCTGC+TGG + chr3_4:73346992-73347011 Msa0520810:CDS 50.0%
ATCAGCTTCCTCACCTGCAA+AGG + chr3_4:73347030-73347049 Msa0520810:CDS 50.0%
TCAGCTTCCTCACCTGCAAA+GGG + chr3_4:73347031-73347050 Msa0520810:CDS 50.0%
GAAAAATGCCCTTTCGGCTG+TGG + chr3_4:73347156-73347175 Msa0520810:CDS 50.0%
ATAGGGATGCAGATGCCAAC+AGG - chr3_4:73347237-73347256 None:intergenic 50.0%
TCTGCATCCCTATGCTCTGT+TGG + chr3_4:73347244-73347263 Msa0520810:CDS 50.0%
CATACGCTCCAACAGAGCAT+AGG - chr3_4:73347255-73347274 None:intergenic 50.0%
TGGTCTGCCAGAAAAGCCTA+CGG + chr3_4:73347492-73347511 Msa0520810:three_prime_UTR 50.0%
! AGCTTTGACATCTGCCGTGG+CGG - chr3_4:73344998-73345017 None:intergenic 55.0%
! TGCAGCTTTGACATCTGCCG+TGG - chr3_4:73345001-73345020 None:intergenic 55.0%
CTGCGTTCTTGCTCACTGGA+AGG - chr3_4:73345069-73345088 None:intergenic 55.0%
CTTCCAGTGAGCAAGAACGC+AGG + chr3_4:73345067-73345086 Msa0520810:CDS 55.0%
TCCAGTGAGCAAGAACGCAG+GGG + chr3_4:73345069-73345088 Msa0520810:CDS 55.0%
GTACCACACGATGCACCACT+TGG + chr3_4:73345156-73345175 Msa0520810:CDS 55.0%
AGACCAAGTGGTGCATCGTG+TGG - chr3_4:73345162-73345181 None:intergenic 55.0%
CTACTGCTGACAGGAGGCTA+GGG + chr3_4:73345670-73345689 Msa0520810:intron 55.0%
GGATGGCAATTCGAAGGCGA+AGG + chr3_4:73346072-73346091 Msa0520810:CDS 55.0%
!! AGAGGGTTTGCAGGTTGGTG+GGG + chr3_4:73346533-73346552 Msa0520810:CDS 55.0%
TGGTGGGGACGAGAGAAAGA+CGG + chr3_4:73346548-73346567 Msa0520810:CDS 55.0%
GGATGGACAAAGTGGGACAC+GGG + chr3_4:73346918-73346937 Msa0520810:CDS 55.0%
AGTCCTGCAACAAGTCCAGC+AGG - chr3_4:73347010-73347029 None:intergenic 55.0%
CAGCTTCCTCACCTGCAAAG+GGG + chr3_4:73347032-73347051 Msa0520810:CDS 55.0%
AGCTTCCTCACCTGCAAAGG+GGG + chr3_4:73347033-73347052 Msa0520810:CDS 55.0%
GGCTGTTGCGTTAGCTGCAT+TGG + chr3_4:73347177-73347196 Msa0520810:CDS 55.0%
TGCAGGGTATGTCACCGCCA+CGG + chr3_4:73344981-73345000 Msa0520810:CDS 60.0%
ACCCCTGCGTTCTTGCTCAC+TGG - chr3_4:73345073-73345092 None:intergenic 60.0%
GCTACTGCTGACAGGAGGCT+AGG + chr3_4:73345669-73345688 Msa0520810:intron 60.0%
!! GCACCTGCTGGACTTGTTGC+AGG + chr3_4:73347004-73347023 Msa0520810:CDS 60.0%
GCTTCCTCACCTGCAAAGGG+GGG + chr3_4:73347034-73347053 Msa0520810:CDS 60.0%
AATGCCCCCCTTTGCAGGTG+AGG - chr3_4:73347041-73347060 None:intergenic 60.0%
! TCACCTGCAAAGGGGGGCAT+TGG + chr3_4:73347040-73347059 Msa0520810:CDS 60.0%
!! CACCTGCAAAGGGGGGCATT+GGG + chr3_4:73347041-73347060 Msa0520810:CDS 60.0%
CGCAACAGCCACAGCCGAAA+GGG - chr3_4:73347167-73347186 None:intergenic 60.0%
ACGCAACAGCCACAGCCGAA+AGG - chr3_4:73347168-73347187 None:intergenic 60.0%
GGGATGCAGATGCCAACAGG+AGG - chr3_4:73347234-73347253 None:intergenic 60.0%
GTCCCAATGCCCCCCTTTGC+AGG - chr3_4:73347046-73347065 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 73344667 73347563 73344667 ID=Msa0520810;Name=Msa0520810
chr3_4 mRNA 73344667 73347563 73344667 ID=Msa0520810-mRNA-1;Parent=Msa0520810;Name=Msa0520810-mRNA-1;_AED=0.00;_eAED=0.00;_QI=159|1|1|1|1|1|3|227|552
chr3_4 exon 73344667 73345262 73344667 ID=Msa0520810-mRNA-1:exon:20534;Parent=Msa0520810-mRNA-1
chr3_4 exon 73346014 73346116 73346014 ID=Msa0520810-mRNA-1:exon:20535;Parent=Msa0520810-mRNA-1
chr3_4 exon 73346218 73347563 73346218 ID=Msa0520810-mRNA-1:exon:20536;Parent=Msa0520810-mRNA-1
chr3_4 five_prime_UTR 73344667 73344825 73344667 ID=Msa0520810-mRNA-1:five_prime_utr;Parent=Msa0520810-mRNA-1
chr3_4 CDS 73344826 73345262 73344826 ID=Msa0520810-mRNA-1:cds;Parent=Msa0520810-mRNA-1
chr3_4 CDS 73346014 73346116 73346014 ID=Msa0520810-mRNA-1:cds;Parent=Msa0520810-mRNA-1
chr3_4 CDS 73346218 73347336 73346218 ID=Msa0520810-mRNA-1:cds;Parent=Msa0520810-mRNA-1
chr3_4 three_prime_UTR 73347337 73347563 73347337 ID=Msa0520810-mRNA-1:three_prime_utr;Parent=Msa0520810-mRNA-1
Gene Sequence

>Msa0520810

ATGGCGTTGGTAAATCCATTTCTTCTCCCCACCAAAACTCATTTTGCTTTGCATGTTTCACCTCCACCATCCAAACAAATACTCCTTTGGACTAACCCATCTTCCAGTTTCAGTTTCAATCTCAACAAAGGCTTGTCATCAAGCAGAAGAAAGCATGCAGGGTATGTCACCGCCACGGCAGATGTCAAAGCTGCATCAACTGTACTTGATGGGGAAGAAGATCAGAAAGTTCTAGTGGGACCTTCCAGTGAGCAAGAACGCAGGGGTGAGAGAGAACTTGCAGCCTATGATTGGAAAGAGGAATGGTACCCTTTGTACCTCACTAAGAATGTACCACACGATGCACCACTTGGTCTCACAGTGTTTGACAAGAACCTTGTTTTGTTTAAAGATGGCAATGATCAGATTCAATGCTATGAAGATCGGTGTCCTCACAGGTTAGCAAAACTATCTGAAGGCCAGTTGATTGATGGAAGGCTTGAATGCCTGTATCATGGATGGCAATTCGAAGGCGAAGGGAAATGTGTGAAGATACCTCAGCTTCCAGCTGATGCAAAAATTCCCAGGTCAGCCTGTGTTAAAACATATGAAGTGAGGGATTCTCAAGGTGTTATTTGGGTATGGATGTCACAAAAGATACCTCCAAATGTCAGTAAAATACCTTGGTTTGAGAACTTTGCAAGGCCAGGGTTTCAAGATGTTTCAACAACTCATGAACTCCCATATGATCATTCTATTCTACTGGAAAACTTGATGGATCCTGCTCATATTCCAATCTCGCATGATAGAACAGATTGGACTGCAAAGAGAGAAGATGCACAACCGCTACTTTTTGAGGTGACAGAACGAACTGATAGAGGGTTTGCAGGTTGGTGGGGACGAGAGAAAGACGGTACTAAGCCTAACTTCTTACGGTTTGAGGCTCCTTGTGTTCTACAAAATAACAGGGAAATTGTAGATAAAAATGGTGAAATAAACTACTTCAGTGGTCTGTTCCTTTGTAGGCCAACTGGACAAGGGAAATCCATGCTGATAGTGAGGTTTGGAGGAACAAAAAGATCTCCAATAGTGAAACTGTTTCCTGAATGGTACTTCCATCAGAATGCAAGCAAGGTTTTTGAACAAGACATGGGATTCTTATCATCCCAAAATGAAATTCTTTTGAAAGAGAAGGTTCCGACAAAGGAACTATACCTGAATTTAAGATCATCAGACACATGGGTTGCTGAATACAGGAAGTGGATGGACAAAGTGGGACACGGGATGCCATATCATTTTGGTCACAGCACTATTTCCTTGCCTAAAGAGCCTGCTGTAGTTGAACATGCACCTGCTGGACTTGTTGCAGGACTATCAGCTTCCTCACCTGCAAAGGGGGGCATTGGGACAATGCATGCTCCAAATTTAGCAAATAGATATTTCAGGCATGTAATACATTGCAATACATGTAGAACCGCCGTCAAAGCTTTTCAAACTTGGAAAAATGCCCTTTCGGCTGTGGCTGTTGCGTTAGCTGCATTGGCAATTCTTGTATCTGGGAGACAATGGAAAGTCCTCCTGTTGGCATCTGCATCCCTATGCTCTGTTGGAGCGTATGCTTGTTCAACAGCCATTGCATTGAATACAACAAACTTTATTAGGACACATAGGAGATTGTGA

Protein sequence

>Msa0520810

MALVNPFLLPTKTHFALHVSPPPSKQILLWTNPSSSFSFNLNKGLSSSRRKHAGYVTATADVKAASTVLDGEEDQKVLVGPSSEQERRGERELAAYDWKEEWYPLYLTKNVPHDAPLGLTVFDKNLVLFKDGNDQIQCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVKTYEVRDSQGVIWVWMSQKIPPNVSKIPWFENFARPGFQDVSTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLLFEVTERTDRGFAGWWGREKDGTKPNFLRFEAPCVLQNNREIVDKNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPIVKLFPEWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKEPAVVEHAPAGLVAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCNTCRTAVKAFQTWKNALSAVAVALAALAILVSGRQWKVLLLASASLCSVGAYACSTAIALNTTNFIRTHRRL*