AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0218430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0218430 MtrunA17_Chr2g0320581 94.106 509 24 1 1 509 1 503 0.0 997
Msa0218430 MtrunA17_Chr2g0315161 59.836 488 173 9 10 495 8 474 0.0 583
Msa0218430 MtrunA17_Chr7g0266851 50.766 457 200 7 56 498 53 498 4.64e-156 454
Msa0218430 MtrunA17_Chr7g0266831 48.472 458 216 6 56 499 66 517 8.58e-147 431
Msa0218430 MtrunA17_Chr4g0054411 43.816 477 217 8 56 495 56 518 2.18e-129 386
Msa0218430 MtrunA17_Chr5g0405091 31.347 453 228 26 11 435 7 404 8.31e-33 130
Msa0218430 MtrunA17_Chr7g0216291 65.789 76 24 1 119 192 3 78 3.01e-25 99.4
Msa0218430 MtrunA17_Chr8g0372201 28.519 270 152 12 183 435 28 273 1.83e-14 74.7
Msa0218430 MtrunA17_Chr2g0316381 58.696 46 19 0 458 503 8 53 4.49e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0218430 AT5G22860.1 50.398 502 227 8 13 502 8 499 1.14e-171 494
Msa0218430 AT5G22860.4 51.106 452 205 7 13 452 8 455 1.23e-155 451
Msa0218430 AT5G22860.2 51.376 436 196 7 13 436 8 439 1.26e-150 438
Msa0218430 AT5G22860.3 51.376 436 196 7 13 436 8 439 1.26e-150 438
Msa0218430 AT2G24280.1 44.071 506 245 7 11 498 5 490 6.94e-145 425
Msa0218430 AT5G65760.1 45.952 457 220 8 56 497 59 503 7.96e-138 408
Msa0218430 AT5G22860.7 50.123 407 187 7 13 407 8 410 1.37e-133 397
Msa0218430 AT5G22860.5 50.123 407 187 7 13 407 8 410 1.37e-133 397
Msa0218430 AT5G22860.6 50.123 407 187 7 13 407 8 410 1.37e-133 397
Msa0218430 AT2G24280.2 44.144 444 216 6 11 436 5 434 2.21e-125 373
Msa0218430 AT5G22860.8 49.861 359 165 6 13 360 8 362 8.70e-114 341
Msa0218430 AT3G28680.1 42.529 174 95 4 190 359 18 190 5.15e-42 149
Msa0218430 AT4G36195.2 27.805 410 225 16 56 435 46 414 1.02e-24 107
Msa0218430 AT4G36195.3 27.805 410 225 16 56 435 46 414 1.99e-24 106
Msa0218430 AT4G36195.1 27.805 410 225 16 56 435 46 414 1.99e-24 106
Msa0218430 AT4G36190.1 28.710 411 220 18 56 435 46 414 3.82e-24 105
Msa0218430 AT2G18080.1 25.208 480 268 21 58 493 48 480 5.44e-22 99.4

Find 109 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGGTTGCAATGTCGTTTA+AGG 0.140246 2_1:-65591199 None:intergenic
ATATACTAAAAGAGCTTTAA+AGG 0.168188 2_1:-65591448 None:intergenic
ATTTGATCAATTTCAAATAT+TGG 0.182290 2_1:+65591322 Msa0218430:CDS
CATTGGATTACTACTTATTA+TGG 0.189882 2_1:+65594710 Msa0218430:CDS
TTTGATCAATTTCAAATATT+GGG 0.216568 2_1:+65591323 Msa0218430:CDS
TAAAATGTTTCAACATCTTT+TGG 0.224312 2_1:-65591234 None:intergenic
TCACGACTACTGGGGAGTTT+TGG 0.230509 2_1:-65591746 None:intergenic
AAAGTTATTCTCCTTATAAT+TGG 0.237681 2_1:+65591053 Msa0218430:five_prime_UTR
TTATATCAGCATCGGTATTA+TGG 0.238679 2_1:+65591594 Msa0218430:intron
GGAATTGATAAAGCTTCTTT+TGG 0.245805 2_1:+65593133 Msa0218430:CDS
ATCATATATATCATTTGTTT+TGG 0.250067 2_1:-65597128 None:intergenic
TCACTTGGCCATTGGTGCTT+TGG 0.266851 2_1:+65592122 Msa0218430:CDS
TTTCATTGCAACCAATTATA+AGG 0.267506 2_1:-65591064 None:intergenic
CAACTCAAAAGAATGGTTTA+AGG 0.287048 2_1:-65593029 None:intergenic
AAACGAGTTCTTCAAAAGTT+TGG 0.309801 2_1:+65595300 Msa0218430:CDS
ATAGACATTAATTCTATTGC+AGG 0.319412 2_1:+65596961 Msa0218430:intron
CAGTGCTTGCTGCATGGTTT+AGG 0.320590 2_1:+65592088 Msa0218430:intron
CCACTACATATCACGGTAAC+TGG 0.327485 2_1:-65593112 None:intergenic
TGCTCCAATATTTGTCTACT+TGG 0.333285 2_1:+65591362 Msa0218430:CDS
TCTTTCATTCATAGTTGAAT+TGG 0.336976 2_1:+65591017 None:intergenic
GAACCATCTATTGCTTGTTC+TGG 0.339066 2_1:-65591387 None:intergenic
GGACCCAAGTAGACAAATAT+TGG 0.343910 2_1:-65591366 None:intergenic
TATTGCAGGATCCCATTGTT+TGG 0.351682 2_1:+65596975 Msa0218430:CDS
GGCCAGTATTATATTGATCT+TGG 0.358230 2_1:+65597081 Msa0218430:CDS
CGTTGTTCAATCAACCATCT+TGG 0.362655 2_1:-65597024 None:intergenic
GCTTACCCGGCACTACTATA+AGG 0.362908 2_1:-65595357 None:intergenic
CTAAGAATTGAAAGACCATT+TGG 0.372278 2_1:-65592721 None:intergenic
ATCCTTGATAAGATATATTC+AGG 0.388285 2_1:+65593163 Msa0218430:CDS
CCGCAACAAGACTCTTTGAT+AGG 0.388564 2_1:-65595482 None:intergenic
GAAAGATGCAAGAAAGAATA+TGG 0.398219 2_1:+65594671 Msa0218430:CDS
GTGTCTCACCTCGCCCTCAT+TGG 0.398503 2_1:+65594693 Msa0218430:CDS
ATGAAACAATATTGAACTCT+TGG 0.400378 2_1:+65592671 Msa0218430:CDS
ACAAATCTCTTTAAGTCAAA+AGG 0.401588 2_1:-65594647 None:intergenic
CTTAAACGACATTGCAACCT+TGG 0.412069 2_1:+65591200 Msa0218430:CDS
TATGGAAAATCAATACCGTT+TGG 0.413960 2_1:+65591612 Msa0218430:CDS
CACCAAGATCAATATAATAC+TGG 0.419795 2_1:-65597083 None:intergenic
TTAAATGTATTATAGCTTTG+TGG 0.421207 2_1:-65591291 None:intergenic
GATGGTTCTCCTAAGGGTAT+AGG 0.432542 2_1:+65591402 Msa0218430:CDS
GATCCTCCAATCACGACTAC+TGG 0.442947 2_1:-65591756 None:intergenic
AACTCAAAAGAATGGTTTAA+GGG 0.443392 2_1:-65593028 None:intergenic
TTCAGGTGTTGTGGCTTACA+AGG 0.449221 2_1:+65593180 Msa0218430:CDS
ACAACATCGAAATAAGCATT+TGG 0.451510 2_1:-65592186 None:intergenic
ATCACGGTAACTGGATAGTC+TGG 0.453975 2_1:-65593103 None:intergenic
AAAGATCCTTATAGTAGTGC+CGG 0.462281 2_1:+65595351 Msa0218430:CDS
TAGGAGTGGGATTGATAGAA+TGG 0.473688 2_1:-65591131 None:intergenic
ACTAAAAGAGCTTTAAAGGT+TGG 0.474337 2_1:-65591444 None:intergenic
GGTCCAGAACAAGCAATAGA+TGG 0.474492 2_1:+65591384 Msa0218430:CDS
AACTCCCCAGTAGTCGTGAT+TGG 0.475352 2_1:+65591750 Msa0218430:CDS
ATGGTGATGCCTTTCGCTAT+AGG 0.480405 2_1:+65594599 Msa0218430:CDS
GCTCCAATATTTGTCTACTT+GGG 0.484351 2_1:+65591363 Msa0218430:CDS
AGCAATAGATGGTTCTCCTA+AGG 0.489568 2_1:+65591395 Msa0218430:CDS
ATCCTCCAATCACGACTACT+GGG 0.489793 2_1:-65591755 None:intergenic
GCCATGTGAACAAGTTGAAA+TGG 0.491904 2_1:-65591089 None:intergenic
AATTTAGACATGCAGTGAAA+TGG 0.492903 2_1:+65594580 Msa0218430:intron
GTTGTGGCTTACAAGGGAAA+TGG 0.503894 2_1:+65593187 Msa0218430:CDS
AAATATCCTCACTTGGCCAT+TGG 0.510773 2_1:+65592114 Msa0218430:CDS
AGGTAGAATATCCAAACAAT+GGG 0.510816 2_1:-65596986 None:intergenic
TTCAAGAATGCAAACACACT+TGG 0.510819 2_1:+65591651 Msa0218430:CDS
ATTGATCTTGGTGCACTCCA+TGG 0.511982 2_1:+65597093 Msa0218430:CDS
AGACGAGGCCAAAGCACCAA+TGG 0.515427 2_1:-65592130 None:intergenic
GTTGCGGTCCATGCGATCAA+TGG 0.519229 2_1:+65595498 Msa0218430:CDS
ATCAATTTCAAATATTGGGG+TGG 0.520871 2_1:+65591327 Msa0218430:CDS
ATATCATCAAAGTAGAGGAT+TGG 0.521474 2_1:-65592156 None:intergenic
AAAGTAGCGTCGCAGCCAAA+TGG 0.523922 2_1:+65592706 Msa0218430:CDS
GAGATTATTCAAGAGTGGAT+TGG 0.526156 2_1:+65597060 Msa0218430:CDS
TAAGATATATTCAGGTGTTG+TGG 0.531386 2_1:+65593171 Msa0218430:CDS
CACCTGAATATATCTTATCA+AGG 0.532694 2_1:-65593165 None:intergenic
TTGATCAATTTCAAATATTG+GGG 0.533645 2_1:+65591324 Msa0218430:CDS
GCAATAGATGGTTCTCCTAA+GGG 0.537093 2_1:+65591396 Msa0218430:CDS
AAGGTAGAATATCCAAACAA+TGG 0.537131 2_1:-65596987 None:intergenic
CCTCTGACAACTCAAAAGAA+TGG 0.537469 2_1:-65593036 None:intergenic
GTCGTGATTGGAGGATCATA+TGG 0.541129 2_1:+65591762 Msa0218430:CDS
ATCAATTCCACTACATATCA+CGG 0.544440 2_1:-65593119 None:intergenic
CTCTTTAAGTCAAAAGGAGA+AGG 0.546964 2_1:-65594641 None:intergenic
CAAAAGAAAGTGATCCAAGA+TGG 0.547883 2_1:+65597010 Msa0218430:CDS
AGACAGAAGTGGGTTGGAGA+TGG 0.550445 2_1:+65593245 Msa0218430:CDS
TGTCAATGAGTGTGTAGGAG+TGG 0.553790 2_1:-65591145 None:intergenic
AAGATCCTTATAGTAGTGCC+GGG 0.557200 2_1:+65595352 Msa0218430:CDS
AGAAGTGGGTTGGAGATGGC+AGG 0.557628 2_1:+65593249 Msa0218430:CDS
ACCATTTCAACTTGTTCACA+TGG 0.558388 2_1:+65591088 Msa0218430:CDS
TAGGCTCAAATATCCTCACT+TGG 0.561155 2_1:+65592107 Msa0218430:CDS
TATCTGAGACAGAAGTGGGT+TGG 0.562993 2_1:+65593239 Msa0218430:CDS
CCAGTTACCGTGATATGTAG+TGG 0.564278 2_1:+65593112 Msa0218430:CDS
TGGATTACTACTTATTATGG+AGG 0.567337 2_1:+65594713 Msa0218430:CDS
GCTTCTTCTCTTGATCCAAA+CGG 0.572228 2_1:-65591627 None:intergenic
TCCCCAGTAGTCGTGATTGG+AGG 0.577046 2_1:+65591753 Msa0218430:CDS
GATTGAACAACGAAATAAAG+AGG 0.581874 2_1:+65597035 Msa0218430:CDS
AAATATATCTGAGACAGAAG+TGG 0.583630 2_1:+65593234 Msa0218430:CDS
AAGACATACCATTGATCGCA+TGG 0.584348 2_1:-65595506 None:intergenic
TCGTCGAATGGAGATAACCT+TGG 0.586295 2_1:-65591171 None:intergenic
AGGTCGAGATTATTCAAGAG+TGG 0.591638 2_1:+65597055 Msa0218430:CDS
GTCAATGAGTGTGTAGGAGT+GGG 0.593257 2_1:-65591144 None:intergenic
TATACACAGTGCTTGCTGCA+TGG 0.596133 2_1:+65592082 Msa0218430:intron
AATATATCTGAGACAGAAGT+GGG 0.597565 2_1:+65593235 Msa0218430:CDS
AATAAGTAGTAATCCAATGA+GGG 0.598968 2_1:-65594706 None:intergenic
GTAGTAATCCAATGAGGGCG+AGG 0.600782 2_1:-65594701 None:intergenic
GTAGAGGATTGGAGCAGACG+AGG 0.605838 2_1:-65592145 None:intergenic
TCAGGTGTTGTGGCTTACAA+GGG 0.616951 2_1:+65593181 Msa0218430:CDS
GTATCATTTCCTATAGCGAA+AGG 0.619045 2_1:-65594608 None:intergenic
TAATAAGTAGTAATCCAATG+AGG 0.619229 2_1:-65594707 None:intergenic
ATGTAATATCATCAAAGTAG+AGG 0.625566 2_1:-65592161 None:intergenic
ACTCAAAAGAATGGTTTAAG+GGG 0.631595 2_1:-65593027 None:intergenic
GGTATTGTCAATGAGTGTGT+AGG 0.656725 2_1:-65591150 None:intergenic
AAAGCACCAATGGCCAAGTG+AGG 0.660296 2_1:-65592120 None:intergenic
CCTATCAAAGAGTCTTGTTG+CGG 0.666760 2_1:+65595482 Msa0218430:CDS
GTGATTGGAGGATCATATGG+TGG 0.675642 2_1:+65591765 Msa0218430:CDS
ACGGTAACTGGATAGTCTGG+AGG 0.692907 2_1:-65593100 None:intergenic
CACACTCATTGACAATACCA+AGG 0.695882 2_1:+65591154 Msa0218430:CDS
TCCTCCAATCACGACTACTG+GGG 0.724998 2_1:-65591754 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr2_1:65595565-65595584 Msa0218430:intron 0.0%
!! TATATATATATATATATATA+GGG + chr2_1:65595564-65595583 Msa0218430:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr2_1:65595565-65595584 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr2_1:65595564-65595583 None:intergenic 0.0%
!!! TTATATTTATAATAATTTTA+AGG - chr2_1:65596746-65596765 None:intergenic 0.0%
!! AAAAACTAAATAAAAGAATA+CGG - chr2_1:65592010-65592029 None:intergenic 10.0%
!!! AAAAAATTAGTTTATTTACA+GGG - chr2_1:65592272-65592291 None:intergenic 10.0%
!!! CTAATTTTTTCTTTAAAATT+TGG + chr2_1:65592282-65592301 Msa0218430:intron 10.0%
!! AAAAAATGTATAATAAATAG+AGG - chr2_1:65594079-65594098 None:intergenic 10.0%
!! ATAATGTTATATATTAATGT+AGG - chr2_1:65594851-65594870 None:intergenic 10.0%
!!! TAATAAGATAATAATTTTTC+GGG + chr2_1:65595987-65596006 Msa0218430:intron 10.0%
!!! TATTAATTTATGATTTTCTT+GGG - chr2_1:65596035-65596054 None:intergenic 10.0%
!!! TTATTAATTTATGATTTTCT+TGG - chr2_1:65596036-65596055 None:intergenic 10.0%
!! TTATGTATGTAAATTTATAA+TGG + chr2_1:65596541-65596560 Msa0218430:intron 10.0%
!! ATTTGATCAATTTCAAATAT+TGG + chr2_1:65591322-65591341 Msa0218430:CDS 15.0%
!! TTTGATCAATTTCAAATATT+GGG + chr2_1:65591323-65591342 Msa0218430:CDS 15.0%
!!! TAATAATTTTATATCAGCAT+CGG + chr2_1:65591586-65591605 Msa0218430:intron 15.0%
!! AATCTTAATCATAACATAAA+GGG - chr2_1:65591963-65591982 None:intergenic 15.0%
!!! GAAAAAATTAGTTTATTTAC+AGG - chr2_1:65592273-65592292 None:intergenic 15.0%
!!! AAATCTATTCATTTTGAAAT+TGG - chr2_1:65592424-65592443 None:intergenic 15.0%
!! AAACAAAACAAAAAATTACA+AGG + chr2_1:65592512-65592531 Msa0218430:intron 15.0%
!!! TAACTAATTAATTCATTTTC+AGG + chr2_1:65592630-65592649 Msa0218430:intron 15.0%
!!! AATTTAACGTTTTTTTTTTG+TGG - chr2_1:65592922-65592941 None:intergenic 15.0%
!! AACGTTAAATTATTAAATGT+TGG + chr2_1:65592931-65592950 Msa0218430:intron 15.0%
!!! AAAGTCTTATTTTTTTAATG+CGG - chr2_1:65593388-65593407 None:intergenic 15.0%
!!! GACAATTTTTTTTCATAAAA+GGG - chr2_1:65593997-65594016 None:intergenic 15.0%
!!! TTTTTATCTTTGCATATATA+TGG + chr2_1:65594526-65594545 Msa0218430:intron 15.0%
!! AAAAAAAGACATTTAAATCA+AGG - chr2_1:65595156-65595175 None:intergenic 15.0%
!!! GATTTAAATGTCTTTTTTTA+AGG + chr2_1:65595157-65595176 Msa0218430:intron 15.0%
!!! ATTGTTACATTTTTCTTTTT+TGG - chr2_1:65595234-65595253 None:intergenic 15.0%
!!! CAATTCAATTTTGAATTTTA+TGG - chr2_1:65595384-65595403 None:intergenic 15.0%
!!! TCTAAAATAATAAATTTGTC+CGG + chr2_1:65595921-65595940 Msa0218430:intron 15.0%
!!! AGTTTTTCAATTTTTTACAT+TGG - chr2_1:65595959-65595978 None:intergenic 15.0%
!!! TATATTTTTTTCAGTTTCTA+TGG - chr2_1:65596060-65596079 None:intergenic 15.0%
!! TCTAAATTAATAAATTTCTC+CGG + chr2_1:65596319-65596338 Msa0218430:intron 15.0%
!! CTCTATAAATTAATAATGTT+AGG - chr2_1:65596346-65596365 None:intergenic 15.0%
!! ATCAGTTAAGTTAAAATTTA+TGG - chr2_1:65596460-65596479 None:intergenic 15.0%
!! TTTATACTACTAAAATATTG+TGG + chr2_1:65596805-65596824 Msa0218430:intron 15.0%
!! AAATAATTTAGTGACTAAAT+TGG + chr2_1:65596875-65596894 Msa0218430:intron 15.0%
!! AAAGTTATTCTCCTTATAAT+TGG + chr2_1:65591053-65591072 Msa0218430:five_prime_UTR 20.0%
!!! TAAAATGTTTCAACATCTTT+TGG - chr2_1:65591237-65591256 None:intergenic 20.0%
!!! TTAAATGTATTATAGCTTTG+TGG - chr2_1:65591294-65591313 None:intergenic 20.0%
!! TTGATCAATTTCAAATATTG+GGG + chr2_1:65591324-65591343 Msa0218430:CDS 20.0%
!!! ATATACTAAAAGAGCTTTAA+AGG - chr2_1:65591451-65591470 None:intergenic 20.0%
!! AAAAAAATATTGCTAGCAAA+GGG - chr2_1:65591507-65591526 None:intergenic 20.0%
!! TAAAAAAATATTGCTAGCAA+AGG - chr2_1:65591508-65591527 None:intergenic 20.0%
!!! TAAAGGGTTTTGAATTTTTT+TGG - chr2_1:65591947-65591966 None:intergenic 20.0%
!! CAATCTTAATCATAACATAA+AGG - chr2_1:65591964-65591983 None:intergenic 20.0%
!!! TAATTTTAGTCCTTATTTTG+AGG + chr2_1:65592365-65592384 Msa0218430:intron 20.0%
!!! AATTTTAGTCCTTATTTTGA+GGG + chr2_1:65592366-65592385 Msa0218430:intron 20.0%
!! TGACTAAATCAAAACAATAA+TGG + chr2_1:65592449-65592468 Msa0218430:intron 20.0%
!!! AACACTTTTTGTTTTGTTTT+TGG - chr2_1:65592475-65592494 None:intergenic 20.0%
!!! TAATGAAAGTATGTTTATAC+TGG - chr2_1:65592765-65592784 None:intergenic 20.0%
!! TGGTAATAAAAAACAAACAA+AGG - chr2_1:65592805-65592824 None:intergenic 20.0%
!!! TTTGTTTTTTATTACCAAAC+AGG + chr2_1:65592808-65592827 Msa0218430:intron 20.0%
!!! AAGTCTTATTTTTTTAATGC+GGG - chr2_1:65593387-65593406 None:intergenic 20.0%
!!! TACCATATATGTTTTTATGT+TGG - chr2_1:65593488-65593507 None:intergenic 20.0%
!!! CCTTATAAAATTGATTTAAC+CGG - chr2_1:65593680-65593699 None:intergenic 20.0%
!!! ATATGTTTTATATTCTCTCT+AGG - chr2_1:65593711-65593730 None:intergenic 20.0%
!! AACTTTCTGTCAATTTATAT+CGG + chr2_1:65593820-65593839 Msa0218430:intron 20.0%
!!! GGACAATTTTTTTTCATAAA+AGG - chr2_1:65593998-65594017 None:intergenic 20.0%
!! ATGTACTTGAAAATAACAAA+GGG - chr2_1:65594034-65594053 None:intergenic 20.0%
!! AATGTACTTGAAAATAACAA+AGG - chr2_1:65594035-65594054 None:intergenic 20.0%
!! AGTCAAATAAATGCAATAAT+TGG + chr2_1:65594290-65594309 Msa0218430:intron 20.0%
!!! AATATGTAACATTGATTAGA+GGG + chr2_1:65594414-65594433 Msa0218430:intron 20.0%
!! AATTATTACATCAAAGAAAG+AGG + chr2_1:65594818-65594837 Msa0218430:intron 20.0%
!! AATTATTACATCAAAGAAAG+AGG + chr2_1:65594818-65594837 Msa0218430:intron 20.0%
!! TAGACAATCTAAATTAATGT+AGG - chr2_1:65594946-65594965 None:intergenic 20.0%
!!! ACAAGAAATTAATTTTGTTG+TGG + chr2_1:65595255-65595274 Msa0218430:intron 20.0%
!! CAATGTTATAAAATATTGCA+GGG + chr2_1:65595449-65595468 Msa0218430:intron 20.0%
!! AAACTCTTTGAATTAATACT+CGG + chr2_1:65595883-65595902 Msa0218430:intron 20.0%
!! TAAATTAATAATGTTAGGAC+CGG - chr2_1:65596341-65596360 None:intergenic 20.0%
!!! TGTTTTTTCTTGATAAAGAA+AGG - chr2_1:65596652-65596671 None:intergenic 20.0%
!!! AATATTGTGGATTAAATTGA+TGG + chr2_1:65596818-65596837 Msa0218430:intron 20.0%
! TTTCATTGCAACCAATTATA+AGG - chr2_1:65591067-65591086 None:intergenic 25.0%
!!! TATAGGATTTTTGGTAGAAA+AGG + chr2_1:65591419-65591438 Msa0218430:CDS 25.0%
!! AGCTCTTTTAGTATATATAG+AGG + chr2_1:65591455-65591474 Msa0218430:CDS 25.0%
! TATGATTAAGATTGTGATTG+TGG + chr2_1:65591970-65591989 Msa0218430:intron 25.0%
! ATGTAATATCATCAAAGTAG+AGG - chr2_1:65592164-65592183 None:intergenic 25.0%
! CTAAAAGTTGTATGTTTACA+AGG - chr2_1:65592333-65592352 None:intergenic 25.0%
!!! AATTTTAGTCCCTCAAAATA+AGG - chr2_1:65592378-65592397 None:intergenic 25.0%
! ATGAAACAATATTGAACTCT+TGG + chr2_1:65592671-65592690 Msa0218430:CDS 25.0%
! GATAATGCATAATATATGCA+AGG + chr2_1:65592869-65592888 Msa0218430:intron 25.0%
!!! TTAACGTTTTTTTTTTGTGG+TGG - chr2_1:65592919-65592938 None:intergenic 25.0%
! AACTCAAAAGAATGGTTTAA+GGG - chr2_1:65593031-65593050 None:intergenic 25.0%
! ATCCTTGATAAGATATATTC+AGG + chr2_1:65593163-65593182 Msa0218430:CDS 25.0%
!! TCTGTCTCAGATATATTTTT+GGG - chr2_1:65593232-65593251 None:intergenic 25.0%
!! TTCTGTCTCAGATATATTTT+TGG - chr2_1:65593233-65593252 None:intergenic 25.0%
! GGTAAAAATGTCTAAATTGT+TGG + chr2_1:65593330-65593349 Msa0218430:intron 25.0%
!! TTTTTCCTAACAATAACATC+CGG - chr2_1:65593357-65593376 None:intergenic 25.0%
! GTCCAACATAAAAACATATA+TGG + chr2_1:65593483-65593502 Msa0218430:intron 25.0%
!! CCGGTTAAATCAATTTTATA+AGG + chr2_1:65593677-65593696 Msa0218430:intron 25.0%
! TGTACTTGAAAATAACAAAG+GGG - chr2_1:65594033-65594052 None:intergenic 25.0%
!! TATCTTAATTCCTGTGATTT+TGG + chr2_1:65594210-65594229 Msa0218430:intron 25.0%
! GTAGCAATTATACTAAAATG+TGG + chr2_1:65594264-65594283 Msa0218430:intron 25.0%
! TTGTATAAAAGTCAATTGCT+TGG + chr2_1:65594368-65594387 Msa0218430:intron 25.0%
!! GAATATGTAACATTGATTAG+AGG + chr2_1:65594413-65594432 Msa0218430:intron 25.0%
! ACAAATCTCTTTAAGTCAAA+AGG - chr2_1:65594650-65594669 None:intergenic 25.0%
!!! TTTTGACTTAAAGAGATTTG+TGG + chr2_1:65594649-65594668 Msa0218430:CDS 25.0%
! AATAAGTAGTAATCCAATGA+GGG - chr2_1:65594709-65594728 None:intergenic 25.0%
! TAATAAGTAGTAATCCAATG+AGG - chr2_1:65594710-65594729 None:intergenic 25.0%
! CATTGGATTACTACTTATTA+TGG + chr2_1:65594710-65594729 Msa0218430:CDS 25.0%
!! AGAAAAAAGAAGTACAAACA+TGG - chr2_1:65594739-65594758 None:intergenic 25.0%
!!! AACACTTTTTACACTTTTGA+TGG - chr2_1:65595061-65595080 None:intergenic 25.0%
!! AGCAACATTATATTTTCGAA+TGG + chr2_1:65595324-65595343 Msa0218430:CDS 25.0%
! GCAATGTTATAAAATATTGC+AGG + chr2_1:65595448-65595467 Msa0218430:intron 25.0%
!!! GACTAATTTGTCTTTTTGTT+TGG + chr2_1:65596226-65596245 Msa0218430:intron 25.0%
!! TATAGAGTTCTAACTGTATA+AGG + chr2_1:65596359-65596378 Msa0218430:intron 25.0%
!! ATAGAGTTCTAACTGTATAA+GGG + chr2_1:65596360-65596379 Msa0218430:intron 25.0%
!!! ACACCTTAATGTTTTTATGT+GGG - chr2_1:65596400-65596419 None:intergenic 25.0%
!!! TACACCTTAATGTTTTTATG+TGG - chr2_1:65596401-65596420 None:intergenic 25.0%
! ATACATAAATGAAGTTGTCA+GGG - chr2_1:65596529-65596548 None:intergenic 25.0%
! TATCTGTCATGTTCTATAAT+TGG - chr2_1:65596682-65596701 None:intergenic 25.0%
!! GATGGATCACATATATTTTA+AGG + chr2_1:65596836-65596855 Msa0218430:intron 25.0%
! TAATTTAGTGACTAAATTGG+AGG + chr2_1:65596878-65596897 Msa0218430:intron 25.0%
! AATTTAGTGACTAAATTGGA+GGG + chr2_1:65596879-65596898 Msa0218430:intron 25.0%
! ATAGACATTAATTCTATTGC+AGG + chr2_1:65596961-65596980 Msa0218430:intron 25.0%
GAATGGATGAAAAATATGAG+AGG - chr2_1:65591117-65591136 None:intergenic 30.0%
!!! TTTAAGGTTTTTTCGTCGAA+TGG - chr2_1:65591186-65591205 None:intergenic 30.0%
ATCAATTTCAAATATTGGGG+TGG + chr2_1:65591327-65591346 Msa0218430:CDS 30.0%
!! ACTAAAAGAGCTTTAAAGGT+TGG - chr2_1:65591447-65591466 None:intergenic 30.0%
!! TTATATCAGCATCGGTATTA+TGG + chr2_1:65591594-65591613 Msa0218430:intron 30.0%
TATGGAAAATCAATACCGTT+TGG + chr2_1:65591612-65591631 Msa0218430:CDS 30.0%
!!! CACACTTGGATATTTTAACT+CGG + chr2_1:65591665-65591684 Msa0218430:CDS 30.0%
! GGTTACATGGTAACATTTTA+TGG - chr2_1:65591896-65591915 None:intergenic 30.0%
TTACCATGTAACCTCAAATA+TGG + chr2_1:65591903-65591922 Msa0218430:intron 30.0%
ATATCATCAAAGTAGAGGAT+TGG - chr2_1:65592159-65592178 None:intergenic 30.0%
ACAACATCGAAATAAGCATT+TGG - chr2_1:65592189-65592208 None:intergenic 30.0%
CTAAGAATTGAAAGACCATT+TGG - chr2_1:65592724-65592743 None:intergenic 30.0%
AGGACTAATAATTTCCTGTT+TGG - chr2_1:65592825-65592844 None:intergenic 30.0%
ACTCAAAAGAATGGTTTAAG+GGG - chr2_1:65593030-65593049 None:intergenic 30.0%
CAACTCAAAAGAATGGTTTA+AGG - chr2_1:65593032-65593051 None:intergenic 30.0%
ATCAATTCCACTACATATCA+CGG - chr2_1:65593122-65593141 None:intergenic 30.0%
! GGAATTGATAAAGCTTCTTT+TGG + chr2_1:65593133-65593152 Msa0218430:CDS 30.0%
CACCTGAATATATCTTATCA+AGG - chr2_1:65593168-65593187 None:intergenic 30.0%
! TAAGATATATTCAGGTGTTG+TGG + chr2_1:65593171-65593190 Msa0218430:CDS 30.0%
!! CTGTCTCAGATATATTTTTG+GGG - chr2_1:65593231-65593250 None:intergenic 30.0%
! AAATATATCTGAGACAGAAG+TGG + chr2_1:65593234-65593253 Msa0218430:CDS 30.0%
! AATATATCTGAGACAGAAGT+GGG + chr2_1:65593235-65593254 Msa0218430:CDS 30.0%
TCCATAAATTCTAACTCAAC+TGG + chr2_1:65593309-65593328 Msa0218430:intron 30.0%
ACCAGTTGAGTTAGAATTTA+TGG - chr2_1:65593313-65593332 None:intergenic 30.0%
AAATGTCTAAATTGTTGGAC+CGG + chr2_1:65593335-65593354 Msa0218430:intron 30.0%
TATATCAAGCTATAAGCACT+AGG - chr2_1:65593786-65593805 None:intergenic 30.0%
! AAGGGTCTTATAATTAGAGA+CGG - chr2_1:65593979-65593998 None:intergenic 30.0%
ACAAAGGGGTCATATAAAAA+GGG - chr2_1:65594019-65594038 None:intergenic 30.0%
AACAAAGGGGTCATATAAAA+AGG - chr2_1:65594020-65594039 None:intergenic 30.0%
AAACTAACTCTCTCTCTTAA+AGG + chr2_1:65594134-65594153 Msa0218430:intron 30.0%
AATCACAGGAATTAAGATAG+TGG - chr2_1:65594209-65594228 None:intergenic 30.0%
! GCAAAAGGGTCTTATATATA+AGG + chr2_1:65594232-65594251 Msa0218430:intron 30.0%
AATTTAGACATGCAGTGAAA+TGG + chr2_1:65594580-65594599 Msa0218430:intron 30.0%
GAAAGATGCAAGAAAGAATA+TGG + chr2_1:65594671-65594690 Msa0218430:CDS 30.0%
TGGATTACTACTTATTATGG+AGG + chr2_1:65594713-65594732 Msa0218430:CDS 30.0%
!!! TTTGTTGTGGTTTTGACTAA+TGG + chr2_1:65595268-65595287 Msa0218430:intron 30.0%
AAACGAGTTCTTCAAAAGTT+TGG + chr2_1:65595300-65595319 Msa0218430:CDS 30.0%
ACACCTTCATAAAAAGTAGT+TGG + chr2_1:65595736-65595755 Msa0218430:intron 30.0%
!!! ACACCAACTACTTTTTATGA+AGG - chr2_1:65595742-65595761 None:intergenic 30.0%
ATAAAAGACACCTTCACAAA+AGG + chr2_1:65595791-65595810 Msa0218430:intron 30.0%
GTACAGTATATGTAAACAAG+AGG - chr2_1:65596109-65596128 None:intergenic 30.0%
! TAGAGTTCTAACTGTATAAG+GGG + chr2_1:65596361-65596380 Msa0218430:intron 30.0%
ACACCCACATAAAAACATTA+AGG + chr2_1:65596394-65596413 Msa0218430:intron 30.0%
CATACATAAATGAAGTTGTC+AGG - chr2_1:65596530-65596549 None:intergenic 30.0%
TCTCAATAAAAAGAAGAGCT+AGG - chr2_1:65596622-65596641 None:intergenic 30.0%
AGGTAGAATATCCAAACAAT+GGG - chr2_1:65596989-65597008 None:intergenic 30.0%
AAGGTAGAATATCCAAACAA+TGG - chr2_1:65596990-65597009 None:intergenic 30.0%
GATTGAACAACGAAATAAAG+AGG + chr2_1:65597035-65597054 Msa0218430:CDS 30.0%
CACCAAGATCAATATAATAC+TGG - chr2_1:65597086-65597105 None:intergenic 30.0%
! ACCATTTCAACTTGTTCACA+TGG + chr2_1:65591088-65591107 Msa0218430:CDS 35.0%
! TTCAACATCTTTTGGATCAG+TGG - chr2_1:65591229-65591248 None:intergenic 35.0%
TGCTCCAATATTTGTCTACT+TGG + chr2_1:65591362-65591381 Msa0218430:CDS 35.0%
GCTCCAATATTTGTCTACTT+GGG + chr2_1:65591363-65591382 Msa0218430:CDS 35.0%
!! TCCTAAGGGTATAGGATTTT+TGG + chr2_1:65591410-65591429 Msa0218430:CDS 35.0%
ACCAAAAATCCTATACCCTT+AGG - chr2_1:65591414-65591433 None:intergenic 35.0%
TTCAAGAATGCAAACACACT+TGG + chr2_1:65591651-65591670 Msa0218430:CDS 35.0%
! CAACCATATTTGAGGTTACA+TGG - chr2_1:65591909-65591928 None:intergenic 35.0%
AGCAATCACAACCATATTTG+AGG - chr2_1:65591917-65591936 None:intergenic 35.0%
TGAGCTTAACTCAGTTGTTA+AGG + chr2_1:65592847-65592866 Msa0218430:intron 35.0%
TGCATAATATATGCAAGGTC+TGG + chr2_1:65592874-65592893 Msa0218430:intron 35.0%
GCATAATATATGCAAGGTCT+GGG + chr2_1:65592875-65592894 Msa0218430:intron 35.0%
CATAATATATGCAAGGTCTG+GGG + chr2_1:65592876-65592895 Msa0218430:intron 35.0%
!!! TTTTTTTTTTGTGGTGGTCG+AGG - chr2_1:65592913-65592932 None:intergenic 35.0%
!! ACAACAAAACTCTAGAGTGT+TGG + chr2_1:65592963-65592982 Msa0218430:intron 35.0%
GCTTTGTAAGGATGTGTTAT+AGG + chr2_1:65593461-65593480 Msa0218430:intron 35.0%
ATGCTCATAACTATTGAGCT+TGG - chr2_1:65593566-65593585 None:intergenic 35.0%
CTCAATAGTTATGAGCATGA+GGG + chr2_1:65593568-65593587 Msa0218430:intron 35.0%
TCAATAGTTATGAGCATGAG+GGG + chr2_1:65593569-65593588 Msa0218430:intron 35.0%
! GAGTTCTGTCTTTTCAATGT+GGG - chr2_1:65593615-65593634 None:intergenic 35.0%
! AGAGTTCTGTCTTTTCAATG+TGG - chr2_1:65593616-65593635 None:intergenic 35.0%
!! ATTGATTTAACCGGCTTGTA+AGG - chr2_1:65593671-65593690 None:intergenic 35.0%
!! ATTCCTGTGATTTTGGCAAA+AGG + chr2_1:65594217-65594236 Msa0218430:intron 35.0%
!! TTCCTGTGATTTTGGCAAAA+GGG + chr2_1:65594218-65594237 Msa0218430:intron 35.0%
! GGTCTTATATATAAGGACGT+AGG + chr2_1:65594239-65594258 Msa0218430:intron 35.0%
AAATGTGACTCATTGTGAGA+TGG + chr2_1:65594480-65594499 Msa0218430:intron 35.0%
GTATCATTTCCTATAGCGAA+AGG - chr2_1:65594611-65594630 None:intergenic 35.0%
CTCTTTAAGTCAAAAGGAGA+AGG - chr2_1:65594644-65594663 None:intergenic 35.0%
AAAGATCCTTATAGTAGTGC+CGG + chr2_1:65595351-65595370 Msa0218430:CDS 35.0%
! TGAATTTTATGGTGCTTACC+CGG - chr2_1:65595373-65595392 None:intergenic 35.0%
!!! CACACTACTTTTTATGAAGG+TGG - chr2_1:65595650-65595669 None:intergenic 35.0%
CACCTTCATAAAAAGTAGTG+TGG + chr2_1:65595648-65595667 Msa0218430:intron 35.0%
!!! CACCACACTACTTTTTATGA+AGG - chr2_1:65595653-65595672 None:intergenic 35.0%
! TTTTATCAAGTCACACCTCA+AGG + chr2_1:65595675-65595694 Msa0218430:intron 35.0%
AAAGTGAAAATCACACCTTG+AGG - chr2_1:65595693-65595712 None:intergenic 35.0%
! ATAGAAGACACCTTTTGTGA+AGG - chr2_1:65595804-65595823 None:intergenic 35.0%
!!! TTTTTTACATTGGCCCAAGT+CGG - chr2_1:65595949-65595968 None:intergenic 35.0%
ACTACTGTGTTCATATGCAT+TGG - chr2_1:65596152-65596171 None:intergenic 35.0%
TGGACAAAGAAATACACTAG+TGG - chr2_1:65596440-65596459 None:intergenic 35.0%
AGCTAGGAAAAATAGAACGA+GGG - chr2_1:65596606-65596625 None:intergenic 35.0%
! CTTGGATCACTTTCTTTTGA+AGG - chr2_1:65597009-65597028 None:intergenic 35.0%
CAAAAGAAAGTGATCCAAGA+TGG + chr2_1:65597010-65597029 Msa0218430:CDS 35.0%
GAGATTATTCAAGAGTGGAT+TGG + chr2_1:65597060-65597079 Msa0218430:CDS 35.0%
GGCCAGTATTATATTGATCT+TGG + chr2_1:65597081-65597100 Msa0218430:CDS 35.0%
! GCCATGTGAACAAGTTGAAA+TGG - chr2_1:65591092-65591111 None:intergenic 40.0%
TAGGAGTGGGATTGATAGAA+TGG - chr2_1:65591134-65591153 None:intergenic 40.0%
GGTATTGTCAATGAGTGTGT+AGG - chr2_1:65591153-65591172 None:intergenic 40.0%
CACACTCATTGACAATACCA+AGG + chr2_1:65591154-65591173 Msa0218430:CDS 40.0%
! CAAGGTTGCAATGTCGTTTA+AGG - chr2_1:65591202-65591221 None:intergenic 40.0%
CTTAAACGACATTGCAACCT+TGG + chr2_1:65591200-65591219 Msa0218430:CDS 40.0%
! TTTTGGATCAGTGGAAACCA+AGG - chr2_1:65591220-65591239 None:intergenic 40.0%
GGACCCAAGTAGACAAATAT+TGG - chr2_1:65591369-65591388 None:intergenic 40.0%
GAACCATCTATTGCTTGTTC+TGG - chr2_1:65591390-65591409 None:intergenic 40.0%
AGCAATAGATGGTTCTCCTA+AGG + chr2_1:65591395-65591414 Msa0218430:CDS 40.0%
GCAATAGATGGTTCTCCTAA+GGG + chr2_1:65591396-65591415 Msa0218430:CDS 40.0%
GCTTCTTCTCTTGATCCAAA+CGG - chr2_1:65591630-65591649 None:intergenic 40.0%
TAGGCTCAAATATCCTCACT+TGG + chr2_1:65592107-65592126 Msa0218430:CDS 40.0%
AAATATCCTCACTTGGCCAT+TGG + chr2_1:65592114-65592133 Msa0218430:CDS 40.0%
CCTCTGACAACTCAAAAGAA+TGG - chr2_1:65593039-65593058 None:intergenic 40.0%
!!! CCATTCTTTTGAGTTGTCAG+AGG + chr2_1:65593036-65593055 Msa0218430:CDS 40.0%
!!! TTTTGAGTTGTCAGAGGACT+TGG + chr2_1:65593042-65593061 Msa0218430:CDS 40.0%
TTGGACCGGATGTTATTGTT+AGG + chr2_1:65593349-65593368 Msa0218430:intron 40.0%
ACCTTACAAGTCGCTTAAGA+TGG + chr2_1:65593439-65593458 Msa0218430:intron 40.0%
!! TCGCTTAAGATGGCTTTGTA+AGG + chr2_1:65593449-65593468 Msa0218430:intron 40.0%
! GGTATCAAGTCTTATCGATC+AGG + chr2_1:65593504-65593523 Msa0218430:intron 40.0%
GCTCAATAGTTATGAGCATG+AGG + chr2_1:65593567-65593586 Msa0218430:intron 40.0%
CACTCATTGTAGCAAAGAGA+GGG - chr2_1:65593897-65593916 None:intergenic 40.0%
TCACTCATTGTAGCAAAGAG+AGG - chr2_1:65593898-65593917 None:intergenic 40.0%
! GGTCTTATAATTAGAGACGG+AGG - chr2_1:65593976-65593995 None:intergenic 40.0%
!! TGTTCTGAGGACAATGGTTA+AGG - chr2_1:65595114-65595133 None:intergenic 40.0%
!!! TTGTGGTTTTGACTAATGGC+AGG + chr2_1:65595272-65595291 Msa0218430:intron 40.0%
AAGATCCTTATAGTAGTGCC+GGG + chr2_1:65595352-65595371 Msa0218430:CDS 40.0%
!! CCTATCAAAGAGTCTTGTTG+CGG + chr2_1:65595482-65595501 Msa0218430:CDS 40.0%
AAGACATACCATTGATCGCA+TGG - chr2_1:65595509-65595528 None:intergenic 40.0%
! TTTTTACATTGGCCCAAGTC+GGG - chr2_1:65595948-65595967 None:intergenic 40.0%
CTAATTTACGTTGAGTCCCA+AGG + chr2_1:65596174-65596193 Msa0218430:intron 40.0%
GAGCTAGGAAAAATAGAACG+AGG - chr2_1:65596607-65596626 None:intergenic 40.0%
TATTGCAGGATCCCATTGTT+TGG + chr2_1:65596975-65596994 Msa0218430:CDS 40.0%
CGTTGTTCAATCAACCATCT+TGG - chr2_1:65597027-65597046 None:intergenic 40.0%
AGGTCGAGATTATTCAAGAG+TGG + chr2_1:65597055-65597074 Msa0218430:CDS 40.0%
GTCAATGAGTGTGTAGGAGT+GGG - chr2_1:65591147-65591166 None:intergenic 45.0%
TGTCAATGAGTGTGTAGGAG+TGG - chr2_1:65591148-65591167 None:intergenic 45.0%
TCGTCGAATGGAGATAACCT+TGG - chr2_1:65591174-65591193 None:intergenic 45.0%
GGTCCAGAACAAGCAATAGA+TGG + chr2_1:65591384-65591403 Msa0218430:CDS 45.0%
! GATGGTTCTCCTAAGGGTAT+AGG + chr2_1:65591402-65591421 Msa0218430:CDS 45.0%
ATCCTCCAATCACGACTACT+GGG - chr2_1:65591758-65591777 None:intergenic 45.0%
GTCGTGATTGGAGGATCATA+TGG + chr2_1:65591762-65591781 Msa0218430:CDS 45.0%
GTGATTGGAGGATCATATGG+TGG + chr2_1:65591765-65591784 Msa0218430:CDS 45.0%
! TATACACAGTGCTTGCTGCA+TGG + chr2_1:65592082-65592101 Msa0218430:intron 45.0%
ACAACTGAGTTAAGCTCACG+AGG - chr2_1:65592845-65592864 None:intergenic 45.0%
ATCACGGTAACTGGATAGTC+TGG - chr2_1:65593106-65593125 None:intergenic 45.0%
CCACTACATATCACGGTAAC+TGG - chr2_1:65593115-65593134 None:intergenic 45.0%
CCAGTTACCGTGATATGTAG+TGG + chr2_1:65593112-65593131 Msa0218430:CDS 45.0%
! TTCAGGTGTTGTGGCTTACA+AGG + chr2_1:65593180-65593199 Msa0218430:CDS 45.0%
! TCAGGTGTTGTGGCTTACAA+GGG + chr2_1:65593181-65593200 Msa0218430:CDS 45.0%
GTTGTGGCTTACAAGGGAAA+TGG + chr2_1:65593187-65593206 Msa0218430:CDS 45.0%
! TATCTGAGACAGAAGTGGGT+TGG + chr2_1:65593239-65593258 Msa0218430:CDS 45.0%
CTTAAGCGACTTGTAAGGTG+AGG - chr2_1:65593438-65593457 None:intergenic 45.0%
GCCATCTTAAGCGACTTGTA+AGG - chr2_1:65593443-65593462 None:intergenic 45.0%
!! TGCTTGGTGCGTGAATATGT+AGG - chr2_1:65593533-65593552 None:intergenic 45.0%
! TATGAGCATGAGGGGTGTAT+TGG + chr2_1:65593577-65593596 Msa0218430:intron 45.0%
!! TTTAACCGGCTTGTAAGGTG+AGG - chr2_1:65593666-65593685 None:intergenic 45.0%
! GACCCTTTTGCCAAAATCAC+AGG - chr2_1:65594223-65594242 None:intergenic 45.0%
! ATGGTGATGCCTTTCGCTAT+AGG + chr2_1:65594599-65594618 Msa0218430:CDS 45.0%
TGCTCTCAGAGTAGTGGTTA+AGG + chr2_1:65594993-65595012 Msa0218430:intron 45.0%
TTAACCAGTGTCGTGTTCTG+AGG - chr2_1:65595127-65595146 None:intergenic 45.0%
CCGCAACAAGACTCTTTGAT+AGG - chr2_1:65595485-65595504 None:intergenic 45.0%
ATTACGTTGCAGCGAACCTT+GGG - chr2_1:65596193-65596212 None:intergenic 45.0%
AATTACGTTGCAGCGAACCT+TGG - chr2_1:65596194-65596213 None:intergenic 45.0%
CGCTGCAACGTAATTCTAAG+AGG + chr2_1:65596199-65596218 Msa0218430:intron 45.0%
! ATTGATCTTGGTGCACTCCA+TGG + chr2_1:65597093-65597112 Msa0218430:CDS 45.0%
!! TTTGGAATTTTGGTGCGCCA+TGG - chr2_1:65597113-65597132 None:intergenic 45.0%
!! TAAAAAAATTATATATTTGT+AGG + chr2_1:65592549-65592568 Msa0218430:intron 5.0%
!! AAAAAAATTATATATTTGTA+GGG + chr2_1:65592550-65592569 Msa0218430:intron 5.0%
!!! TTATTTTATTTAGAATAATT+TGG + chr2_1:65592594-65592613 Msa0218430:intron 5.0%
!!! TTTTTTTTTTTTTTAAAGAA+TGG + chr2_1:65595531-65595550 Msa0218430:intron 5.0%
!!! ATAATAAGATAATAATTTTT+CGG + chr2_1:65595986-65596005 Msa0218430:intron 5.0%
! CACGACTACTGGGGAGTTTT+GGG - chr2_1:65591748-65591767 None:intergenic 50.0%
! TCACGACTACTGGGGAGTTT+TGG - chr2_1:65591749-65591768 None:intergenic 50.0%
AACTCCCCAGTAGTCGTGAT+TGG + chr2_1:65591750-65591769 Msa0218430:CDS 50.0%
TCCTCCAATCACGACTACTG+GGG - chr2_1:65591757-65591776 None:intergenic 50.0%
GATCCTCCAATCACGACTAC+TGG - chr2_1:65591759-65591778 None:intergenic 50.0%
! CAGTGCTTGCTGCATGGTTT+AGG + chr2_1:65592088-65592107 Msa0218430:intron 50.0%
! AAAGCACCAATGGCCAAGTG+AGG - chr2_1:65592123-65592142 None:intergenic 50.0%
! TCACTTGGCCATTGGTGCTT+TGG + chr2_1:65592122-65592141 Msa0218430:CDS 50.0%
AAAGTAGCGTCGCAGCCAAA+TGG + chr2_1:65592706-65592725 Msa0218430:CDS 50.0%
ACGGTAACTGGATAGTCTGG+AGG - chr2_1:65593103-65593122 None:intergenic 50.0%
!! AGACAGAAGTGGGTTGGAGA+TGG + chr2_1:65593245-65593264 Msa0218430:CDS 50.0%
!! GCTTGGTGCGTGAATATGCT+TGG - chr2_1:65593549-65593568 None:intergenic 50.0%
ACGTTCCTCACCTTACAAGC+CGG + chr2_1:65593658-65593677 Msa0218430:intron 50.0%
GTAGTAATCCAATGAGGGCG+AGG - chr2_1:65594704-65594723 None:intergenic 50.0%
AACCAGTGCTCTCAGAGTAG+TGG + chr2_1:65594987-65595006 Msa0218430:intron 50.0%
! AACCACTACTCTGAGAGCAC+TGG - chr2_1:65594992-65595011 None:intergenic 50.0%
!! GTGTCGTGTTCTGAGGACAA+TGG - chr2_1:65595120-65595139 None:intergenic 50.0%
TTGTCCTCAGAACACGACAC+TGG + chr2_1:65595120-65595139 Msa0218430:intron 50.0%
GCTTACCCGGCACTACTATA+AGG - chr2_1:65595360-65595379 None:intergenic 50.0%
AAATTTGTCCGGTCCCGACT+TGG + chr2_1:65595932-65595951 Msa0218430:intron 50.0%
AATTTGTCCGGTCCCGACTT+GGG + chr2_1:65595933-65595952 Msa0218430:intron 50.0%
TCCCCAGTAGTCGTGATTGG+AGG + chr2_1:65591753-65591772 Msa0218430:CDS 55.0%
! AGACGAGGCCAAAGCACCAA+TGG - chr2_1:65592133-65592152 None:intergenic 55.0%
GTAGAGGATTGGAGCAGACG+AGG - chr2_1:65592148-65592167 None:intergenic 55.0%
!! AGAAGTGGGTTGGAGATGGC+AGG + chr2_1:65593249-65593268 Msa0218430:CDS 55.0%
GTTGCGGTCCATGCGATCAA+TGG + chr2_1:65595498-65595517 Msa0218430:CDS 55.0%
TGCGCGCACGCGTTTGTGTT+CGG - chr2_1:65591827-65591846 None:intergenic 60.0%
GTGTCTCACCTCGCCCTCAT+TGG + chr2_1:65594693-65594712 Msa0218430:CDS 60.0%
ACATTGGCCCAAGTCGGGAC+CGG - chr2_1:65595943-65595962 None:intergenic 60.0%
GCGCGCACGCGTTTGTGTTC+GGG - chr2_1:65591826-65591845 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 65591023 65597140 65591023 ID=Msa0218430;Name=Msa0218430
chr2_1 mRNA 65591023 65597140 65591023 ID=Msa0218430-mRNA-1;Parent=Msa0218430;Name=Msa0218430-mRNA-1;_AED=0.27;_eAED=0.27;_QI=58|0.87|0.88|1|1|1|9|0|510
chr2_1 exon 65591023 65591476 65591023 ID=Msa0218430-mRNA-1:exon:18336;Parent=Msa0218430-mRNA-1
chr2_1 exon 65591603 65591789 65591603 ID=Msa0218430-mRNA-1:exon:18337;Parent=Msa0218430-mRNA-1
chr2_1 exon 65592091 65592224 65592091 ID=Msa0218430-mRNA-1:exon:18338;Parent=Msa0218430-mRNA-1
chr2_1 exon 65592652 65592764 65592652 ID=Msa0218430-mRNA-1:exon:18339;Parent=Msa0218430-mRNA-1
chr2_1 exon 65593027 65593270 65593027 ID=Msa0218430-mRNA-1:exon:18340;Parent=Msa0218430-mRNA-1
chr2_1 exon 65594587 65594739 65594587 ID=Msa0218430-mRNA-1:exon:18341;Parent=Msa0218430-mRNA-1
chr2_1 exon 65595294 65595373 65595294 ID=Msa0218430-mRNA-1:exon:18342;Parent=Msa0218430-mRNA-1
chr2_1 exon 65595470 65595519 65595470 ID=Msa0218430-mRNA-1:exon:18343;Parent=Msa0218430-mRNA-1
chr2_1 exon 65596965 65597140 65596965 ID=Msa0218430-mRNA-1:exon:18344;Parent=Msa0218430-mRNA-1
chr2_1 five_prime_UTR 65591023 65591080 65591023 ID=Msa0218430-mRNA-1:five_prime_utr;Parent=Msa0218430-mRNA-1
chr2_1 CDS 65591081 65591476 65591081 ID=Msa0218430-mRNA-1:cds;Parent=Msa0218430-mRNA-1
chr2_1 CDS 65591603 65591789 65591603 ID=Msa0218430-mRNA-1:cds;Parent=Msa0218430-mRNA-1
chr2_1 CDS 65592091 65592224 65592091 ID=Msa0218430-mRNA-1:cds;Parent=Msa0218430-mRNA-1
chr2_1 CDS 65592652 65592764 65592652 ID=Msa0218430-mRNA-1:cds;Parent=Msa0218430-mRNA-1
chr2_1 CDS 65593027 65593270 65593027 ID=Msa0218430-mRNA-1:cds;Parent=Msa0218430-mRNA-1
chr2_1 CDS 65594587 65594739 65594587 ID=Msa0218430-mRNA-1:cds;Parent=Msa0218430-mRNA-1
chr2_1 CDS 65595294 65595373 65595294 ID=Msa0218430-mRNA-1:cds;Parent=Msa0218430-mRNA-1
chr2_1 CDS 65595470 65595519 65595470 ID=Msa0218430-mRNA-1:cds;Parent=Msa0218430-mRNA-1
chr2_1 CDS 65596965 65597140 65596965 ID=Msa0218430-mRNA-1:cds;Parent=Msa0218430-mRNA-1
Gene Sequence

>Msa0218430

ATGAAACACCATTTCAACTTGTTCACATGGCTTCCTCTCATATTTTTCATCCATTCTATCAATCCCACTCCTACACACTCATTGACAATACCAAGGTTATCTCCATTCGACGAAAAAACCTTAAACGACATTGCAACCTTGGTTTCCACTGATCCAAAAGATGTTGAAACATTTTACTACAAACAAGTTCTTGATCACTTCAACTATAATCCACAAAGCTATAATACATTTAATCAAAGATATTTGATCAATTTCAAATATTGGGGTGGTGCAAATTCTAGTGCTCCAATATTTGTCTACTTGGGTCCAGAACAAGCAATAGATGGTTCTCCTAAGGGTATAGGATTTTTGGTAGAAAAGGCACCAACCTTTAAAGCTCTTTTAGTATATATAGAGCATCGGTATTATGGAAAATCAATACCGTTTGGATCAAGAGAAGAAGCGTTCAAGAATGCAAACACACTTGGATATTTTAACTCGGCTCAAGCACTTGCAGATTATGCAGAAGTGATCATAGACATAAAGAAGACATTGCATGCCCAAAACTCCCCAGTAGTCGTGATTGGAGGATCATATGGTGGAATGCTTGCTGCATGGTTTAGGCTCAAATATCCTCACTTGGCCATTGGTGCTTTGGCCTCGTCTGCTCCAATCCTCTACTTTGATGATATTACATCACCAAATGCTTATTTCGATGTTGTTTCAAGAGATTTCAAAGAAGTCAGTGAGACATGTTATGAAACAATATTGAACTCTTGGTCTGAAATTGACAAAGTAGCGTCGCAGCCAAATGGTCTTTCAATTCTTAGTCAAAGATTCAACACTTGCCACCCCTTAAACCATTCTTTTGAGTTGTCAGAGGACTTGGAAAGCATGTATACAAGTGCAGCTCAATATAATCATCCTCCAGACTATCCAGTTACCGTGATATGTAGTGGAATTGATAAAGCTTCTTTTGGAAATAATATCCTTGATAAGATATATTCAGGTGTTGTGGCTTACAAGGGAAATGGCACATGCAAAGTTAATAACCCCAAAAATATATCTGAGACAGAAGTGGGTTGGAGATGGCAGACATGCAGTGAAATGGTGATGCCTTTCGCTATAGGAAATGATACTATGTTTCAACCTTCTCCTTTTGACTTAAAGAGATTTGTGGAAAGATGCAAGAAAGAATATGGTGTCTCACCTCGCCCTCATTGGATTACTACTTATTATGGAGGCCATGATATAAAACGAGTTCTTCAAAAGTTTGGTAGCAACATTATATTTTCGAATGGACTAAAAGATCCTTATAGTAGTGCCGGGGTTTTGCACAACCTATCAAAGAGTCTTGTTGCGGTCCATGCGATCAATGACATTAATTCTATTGCAGGATCCCATTGTTTGGATATTCTACCTTCAAAAGAAAGTGATCCAAGATGGTTGATTGAACAACGAAATAAAGAGGTCGAGATTATTCAAGAGTGGATTGGCCAGTATTATATTGATCTTGGTGCACTCCATGGCGCACCAAAATTCCAAAACAAATGA

Protein sequence

>Msa0218430

MKHHFNLFTWLPLIFFIHSINPTPTHSLTIPRLSPFDEKTLNDIATLVSTDPKDVETFYYKQVLDHFNYNPQSYNTFNQRYLINFKYWGGANSSAPIFVYLGPEQAIDGSPKGIGFLVEKAPTFKALLVYIEHRYYGKSIPFGSREEAFKNANTLGYFNSAQALADYAEVIIDIKKTLHAQNSPVVVIGGSYGGMLAAWFRLKYPHLAIGALASSAPILYFDDITSPNAYFDVVSRDFKEVSETCYETILNSWSEIDKVASQPNGLSILSQRFNTCHPLNHSFELSEDLESMYTSAAQYNHPPDYPVTVICSGIDKASFGNNILDKIYSGVVAYKGNGTCKVNNPKNISETEVGWRWQTCSEMVMPFAIGNDTMFQPSPFDLKRFVERCKKEYGVSPRPHWITTYYGGHDIKRVLQKFGSNIIFSNGLKDPYSSAGVLHNLSKSLVAVHAINDINSIAGSHCLDILPSKESDPRWLIEQRNKEVEIIQEWIGQYYIDLGALHGAPKFQNK*