AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0321180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0321180 MtrunA17_Chr2g0298091 94.344 442 25 0 1 442 1 442 0.0 863
Msa0321180 MtrunA17_Chr3g0132831 77.878 443 92 3 1 440 1 440 0.0 709
Msa0321180 MtrunA17_Chr1g0163441 72.146 438 117 3 1 436 1 435 0.0 635
Msa0321180 MtrunA17_Chr8g0378151 41.121 428 219 9 16 429 16 424 6.44e-98 300
Msa0321180 MtrunA17_Chr7g0274021 25.397 441 276 18 19 424 15 437 2.33e-27 113
Msa0321180 MtrunA17_Chr1g0148851 25.355 422 266 12 35 424 27 431 1.97e-24 105
Msa0321180 MtrunA17_Chr8g0376901 24.549 277 169 9 19 276 10 265 7.10e-15 76.3
Msa0321180 MtrunA17_Chr8g0376891 28.916 166 110 4 19 180 10 171 2.48e-13 71.6
Msa0321180 MtrunA17_Chr3g0087401 27.599 279 171 10 19 275 9 278 4.10e-13 70.9
Msa0321180 MtrunA17_Chr2g0334001 24.444 270 182 10 19 276 10 269 5.88e-13 70.5
Msa0321180 MtrunA17_Chr8g0386141 25.368 272 174 9 18 273 13 271 6.52e-13 70.5
Msa0321180 MtrunA17_Chr4g0072041 24.000 275 162 9 31 276 31 287 8.09e-13 70.1
Msa0321180 MtrunA17_Chr7g0253541 29.018 224 143 6 66 275 60 281 1.32e-12 69.3
Msa0321180 MtrunA17_Chr5g0438721 30.000 120 78 3 63 180 6 121 2.19e-12 64.3
Msa0321180 MtrunA17_Chr5g0408911 27.572 243 159 10 34 269 40 272 4.55e-12 67.8
Msa0321180 MtrunA17_Chr4g0004691 27.815 151 103 2 39 186 29 176 5.04e-12 64.7
Msa0321180 MtrunA17_Chr4g0001861 24.820 278 177 11 16 275 6 269 5.45e-12 67.4
Msa0321180 MtrunA17_Chr4g0054081 22.378 429 255 17 31 404 26 431 2.19e-11 65.5
Msa0321180 MtrunA17_Chr7g0252731 23.723 274 182 8 16 272 21 284 2.69e-11 65.1
Msa0321180 MtrunA17_Chr8g0371821 24.793 242 153 9 49 273 38 267 3.96e-11 64.7
Msa0321180 MtrunA17_Chr8g0376911 24.907 269 171 12 20 273 11 263 6.53e-11 63.9
Msa0321180 MtrunA17_Chr3g0123061 23.019 265 152 11 20 268 13 241 6.92e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0321180 AT4G24510.1 39.679 436 223 13 7 425 1 413 3.22e-100 306
Msa0321180 AT4G13840.1 37.441 422 250 8 11 430 13 422 5.87e-92 285
Msa0321180 AT3G23840.1 37.097 434 247 11 1 430 1 412 2.36e-89 278
Msa0321180 AT4G29250.1 24.306 432 272 18 23 419 23 434 3.31e-19 90.1
Msa0321180 AT2G19070.1 25.763 295 189 9 19 291 11 297 1.91e-17 84.7
Msa0321180 AT3G48720.1 30.345 145 96 4 47 186 41 185 1.49e-12 69.7
Msa0321180 AT5G47950.1 26.693 251 154 9 34 277 28 255 8.26e-12 67.4
Msa0321180 AT5G41040.1 26.122 245 147 9 47 270 65 296 8.41e-12 67.4
Msa0321180 AT5G41040.2 26.230 244 146 9 47 269 49 279 9.04e-12 67.0
Msa0321180 AT1G24420.2 21.691 272 188 8 20 281 13 269 2.21e-11 65.9
Msa0321180 AT1G24420.1 21.691 272 188 8 20 281 13 269 2.21e-11 65.9
Msa0321180 AT5G63560.1 24.706 255 177 9 30 276 25 272 3.01e-11 65.5
Msa0321180 AT1G24430.1 23.466 277 186 10 33 303 27 283 3.38e-11 65.5

Find 104 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTGGTTATCTTGAAAA+TGG 0.179205 2_4:-22314426 Msa0321180:exon
CCTCCATCTCTCACCATATT+TGG 0.208293 2_4:-22314441 Msa0321180:five_prime_UTR
AGGAGGAGGTGCTTCTAAAT+TGG 0.232854 2_4:+22314394 None:intergenic
AGGGAATGGTTGGATGAAAA+TGG 0.238554 2_4:-22314071 Msa0321180:CDS
TTATATGGTGTAAAGCTTAA+TGG 0.239149 2_4:-22311311 Msa0321180:CDS
TTTGGCATGTGAAGAGATTT+TGG 0.255083 2_4:+22311857 None:intergenic
TTATTACCTTCATCATCTTC+TGG 0.255759 2_4:+22311215 None:intergenic
AAATTATTTCAGCTATGATA+TGG 0.259708 2_4:-22311634 Msa0321180:CDS
AAAACGTTGTTGGGGAATAT+TGG 0.274682 2_4:-22311772 Msa0321180:CDS
TCTTCACCTCGTGGTGTTGC+TGG 0.285592 2_4:+22314344 None:intergenic
TTAGATTTAGTGAATCTAAT+TGG 0.286165 2_4:-22311452 Msa0321180:CDS
TCAACAAATCCATGTAGTTT+AGG 0.289089 2_4:+22314306 None:intergenic
AAATCACAATTCGCCATAAT+AGG 0.292583 2_4:+22311281 None:intergenic
CTCAACAATATGTCATTTGT+TGG 0.297897 2_4:+22311515 None:intergenic
CTAAGTTGGGCTCACATTCT+TGG 0.303327 2_4:-22311944 Msa0321180:CDS
TATATGGTGTAAAGCTTAAT+GGG 0.312250 2_4:-22311310 Msa0321180:CDS
AATTGAGGTTTGGCAAGATT+TGG 0.323567 2_4:+22311839 None:intergenic
TTGGAAGAAGCTGATTTATA+TGG 0.336966 2_4:-22311326 Msa0321180:CDS
TTCGATTCTGAAGCTGTTCA+AGG 0.344410 2_4:-22314251 Msa0321180:CDS
GATAAACGGTCTACCGGATT+CGG 0.346628 2_4:+22314148 None:intergenic
TTCAGAATCGAAGAAATAAA+TGG 0.359775 2_4:+22314262 None:intergenic
ATTGGTATTGAAATTGATAT+TGG 0.366519 2_4:+22311670 None:intergenic
ACACCACGAGGTGAAGAAAA+AGG 0.368645 2_4:-22314338 Msa0321180:CDS
CAAGATGAGAGAAGTAGCTT+TGG 0.368751 2_4:+22314475 None:intergenic
GATTTGTACTCGCATGTTGC+CGG 0.368832 2_4:-22314185 Msa0321180:CDS
TTCTAGCCAACTTCACCATT+TGG 0.381913 2_4:-22311702 Msa0321180:CDS
GCTTATGTTGCTACTATGTA+AGG 0.382018 2_4:-22311007 Msa0321180:three_prime_UTR
GAAGATGATGAAGGTAATAA+TGG 0.382087 2_4:-22311212 Msa0321180:CDS
AACACCGATGTTTCCACTGC+TGG 0.384086 2_4:-22314207 Msa0321180:CDS
TAATGGGAAGAAACCTATTA+TGG 0.385797 2_4:-22311294 Msa0321180:CDS
AGCTAGTATGTGACTCCATT+TGG 0.386476 2_4:+22311892 None:intergenic
ACAAAATTGGATAGGAATTG+AGG 0.389132 2_4:+22311824 None:intergenic
GACTCTCTGTAGGACTAAGT+TGG 0.389788 2_4:-22311958 Msa0321180:CDS
GTTGAAATTCTTGAACTTGA+AGG 0.392731 2_4:+22314374 None:intergenic
TGAGAGAAGTAGCTTTGGTT+GGG 0.393211 2_4:+22314480 None:intergenic
TTTCAAGCTTATATTTCAAC+TGG 0.396814 2_4:+22311150 None:intergenic
GCATCGTTGCATTTGATAAA+CGG 0.398176 2_4:+22314134 None:intergenic
ATTGGATAGGAATTGAGGTT+TGG 0.406081 2_4:+22311829 None:intergenic
TATTTGCTCACTATCTTGTA+AGG 0.408093 2_4:-22310972 Msa0321180:three_prime_UTR
AATATAAGCTTGAAAGAGAA+TGG 0.417995 2_4:-22311142 Msa0321180:CDS
TATTTGGTTATCTTGAAAAT+GGG 0.430381 2_4:-22314425 Msa0321180:exon
GGGTGATCAAGGAGTTGTTT+TGG 0.437631 2_4:-22311249 Msa0321180:CDS
CAGTTCACGTGTTTCAAATG+TGG 0.438540 2_4:-22311983 Msa0321180:CDS
TCTAATATATTATATTCGTC+CGG 0.438576 2_4:+22311470 None:intergenic
ATGATAACAGTTTCATTGCC+AGG 0.440593 2_4:-22311185 Msa0321180:CDS
ACATTTATGAAATTATTGTA+TGG 0.442425 2_4:-22310934 Msa0321180:three_prime_UTR
CCTTCATCATCTTCTGGCCC+TGG 0.445345 2_4:+22311221 None:intergenic
AATTTCAAAATACTTAGTAT+TGG 0.449681 2_4:+22311652 None:intergenic
ATATAAGCTTGAAAGAGAAT+GGG 0.453313 2_4:-22311141 Msa0321180:CDS
AACTGGTCAAGTTCTTTCCC+TGG 0.458794 2_4:+22311167 None:intergenic
GGAGGAGGTGCTTCTAAATT+GGG 0.461109 2_4:+22314395 None:intergenic
TGATGAAGCTTCACTATGTC+CGG 0.472252 2_4:-22314286 Msa0321180:CDS
ACTCTCTGTAGGACTAAGTT+GGG 0.477168 2_4:-22311957 Msa0321180:CDS
TTTATCAAATGCAACGATGC+AGG 0.480796 2_4:-22314131 Msa0321180:CDS
CCAAATATGGTGAGAGATGG+AGG 0.494423 2_4:+22314441 None:intergenic
AGTTCACGTGTTTCAAATGT+GGG 0.497596 2_4:-22311982 Msa0321180:CDS
TCAACAAACAAACAAACAAA+AGG 0.499973 2_4:+22311035 None:intergenic
ATGAGAGAAGTAGCTTTGGT+TGG 0.502451 2_4:+22314479 None:intergenic
CTTGTTCATGATCATGTGCT+TGG 0.507531 2_4:-22314032 Msa0321180:CDS
GGGAATGGTTGGATGAAAAT+GGG 0.510486 2_4:-22314070 Msa0321180:CDS
AATTAACGAGAATTATGCAT+TGG 0.510910 2_4:-22311420 Msa0321180:CDS
AAAGTTAACCTTTGTAGACT+TGG 0.517976 2_4:-22311345 Msa0321180:CDS
GCATTTGATAAACGGTCTAC+CGG 0.524003 2_4:+22314142 None:intergenic
TTACGTGGTGTGGGTGATCA+AGG 0.528901 2_4:-22311260 Msa0321180:CDS
CTTATGTTGCTACTATGTAA+GGG 0.531130 2_4:-22311006 Msa0321180:three_prime_UTR
CGAGTTAGAATAGCCGAATC+CGG 0.533458 2_4:-22314161 Msa0321180:CDS
GAGAGAAGTAGCTTTGGTTG+GGG 0.537346 2_4:+22314481 None:intergenic
TGATAACAGTTTCATTGCCA+GGG 0.539695 2_4:-22311184 Msa0321180:CDS
GTGATAAAACGCTGAGGGAA+TGG 0.545873 2_4:-22314085 Msa0321180:CDS
CTAATATATTATATTCGTCC+GGG 0.554744 2_4:+22311471 None:intergenic
TTCGGCTATTCTAACTCGAC+CGG 0.556767 2_4:+22314166 None:intergenic
AATCGAAGAAATAAATGGAC+CGG 0.556767 2_4:+22314267 None:intergenic
TAACCAAATATGGTGAGAGA+TGG 0.557548 2_4:+22314438 None:intergenic
AAGAGGTGACATTGGACCTA+GGG 0.560954 2_4:-22311594 Msa0321180:CDS
GAATTGTGATTTACGTGGTG+TGG 0.567473 2_4:-22311270 Msa0321180:CDS
AAATGTATAGCACAAATAAG+AGG 0.570051 2_4:-22311611 Msa0321180:CDS
ATTCTTGAACTTGAAGGAGG+AGG 0.570601 2_4:+22314380 None:intergenic
AAATGGAGTCACATACTAGC+TGG 0.573672 2_4:-22311890 Msa0321180:CDS
GAAATTCTTGAACTTGAAGG+AGG 0.575868 2_4:+22314377 None:intergenic
AATCGAAACAAATTTGCGCC+CGG 0.576389 2_4:-22311489 Msa0321180:CDS
CGATGCAGGCGTGCGAATCG+CGG 0.576399 2_4:-22314117 Msa0321180:CDS
TGAACACAACCTAAACTACA+TGG 0.576874 2_4:-22314315 Msa0321180:CDS
AATTGTGATTTACGTGGTGT+GGG 0.577058 2_4:-22311269 Msa0321180:CDS
GTACATATTGTCACAACCCT+AGG 0.578375 2_4:+22311578 None:intergenic
TAAAACGCTGAGGGAATGGT+TGG 0.584184 2_4:-22314081 Msa0321180:CDS
TAAGAGGTGACATTGGACCT+AGG 0.589061 2_4:-22311595 Msa0321180:CDS
TATAAGCTTGAAAGAGAATG+GGG 0.591321 2_4:-22311140 Msa0321180:CDS
TCGTGGTGTTGCTGGAACAA+CGG 0.592050 2_4:+22314352 None:intergenic
AAATTGGTGGAGAAAGGTGA+TGG 0.594488 2_4:-22311395 Msa0321180:CDS
GTGATCTGAAATGTGTGACT+AGG 0.599482 2_4:+22311725 None:intergenic
GCACAAATAAGAGGTGACAT+TGG 0.605683 2_4:-22311602 Msa0321180:CDS
TTCACGTGTTTCAAATGTGG+GGG 0.607666 2_4:-22311980 Msa0321180:CDS
CAAATATGGTGAGAGATGGA+GGG 0.610138 2_4:+22314442 None:intergenic
CCAGGGCCAGAAGATGATGA+AGG 0.612665 2_4:-22311221 Msa0321180:CDS
AGCTTCTTCCAAGTCTACAA+AGG 0.615139 2_4:+22311337 None:intergenic
TGATCTGAAATGTGTGACTA+GGG 0.617417 2_4:+22311726 None:intergenic
AGAGAAGTAGCTTTGGTTGG+GGG 0.628854 2_4:+22314482 None:intergenic
GTTCACGTGTTTCAAATGTG+GGG 0.631051 2_4:-22311981 Msa0321180:CDS
TGCGAGTACAAATCCAGCAG+TGG 0.640512 2_4:+22314194 None:intergenic
AAATCCAGCAGTGGAAACAT+CGG 0.641078 2_4:+22314203 None:intergenic
CGCATTGTGATAAAACGCTG+AGG 0.641466 2_4:-22314091 Msa0321180:CDS
GCATTGTGATAAAACGCTGA+GGG 0.658570 2_4:-22314090 Msa0321180:CDS
ATGGCGAATTGTGATTTACG+TGG 0.721025 2_4:-22311275 Msa0321180:CDS
GTTGTTCCAGCAACACCACG+AGG 0.756952 2_4:-22314350 Msa0321180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTATTTGATAAATTAG+CGG - chr2_4:22312210-22312229 Msa0321180:intron 10.0%
!! TTATATATAAAAAGCTTAAT+AGG - chr2_4:22312921-22312940 Msa0321180:intron 10.0%
!! TATATTATTATATGATTGAT+CGG - chr2_4:22313301-22313320 Msa0321180:intron 10.0%
!!! TATTGATAAATTGAGATTTT+AGG - chr2_4:22311461-22311480 Msa0321180:CDS 15.0%
!! ATATTATGTATGTTATAAGT+GGG - chr2_4:22311686-22311705 Msa0321180:CDS 15.0%
!! CAATGTAAAATATTAGAATT+TGG + chr2_4:22311762-22311781 None:intergenic 15.0%
!! AAAATCAACAATATCAATAA+TGG - chr2_4:22312890-22312909 Msa0321180:intron 15.0%
!! AAAACAATATATCTATTATG+CGG + chr2_4:22313191-22313210 None:intergenic 15.0%
!!! ATACTCAAAATTTCTTTTTT+TGG + chr2_4:22313226-22313245 None:intergenic 15.0%
!! AATTTCAAAATACTTAGTAT+TGG + chr2_4:22313712-22313731 None:intergenic 15.0%
!! ACATTTATGAAATTATTGTA+TGG - chr2_4:22314427-22314446 Msa0321180:exon 15.0%
!!! ATTTTCAAGATAACCAAATA+TGG + chr2_4:22310936-22310955 None:intergenic 20.0%
!! ATATTTGGTTATCTTGAAAA+TGG - chr2_4:22310935-22310954 Msa0321180:three_prime_UTR 20.0%
!! TATTTGGTTATCTTGAAAAT+GGG - chr2_4:22310936-22310955 Msa0321180:three_prime_UTR 20.0%
!!! TTTTTAAATCGGATATTGTA+AGG + chr2_4:22311136-22311155 None:intergenic 20.0%
!! AATAATATGATGAAAGAAGT+AGG + chr2_4:22311427-22311446 None:intergenic 20.0%
!! ATCTCAATTTATCAATAACA+CGG + chr2_4:22311458-22311477 None:intergenic 20.0%
!!! TAAATTGAGATTTTAGGTTT+AGG - chr2_4:22311467-22311486 Msa0321180:CDS 20.0%
!!! ATATGGTATGTATTTTTAAG+TGG - chr2_4:22311512-22311531 Msa0321180:CDS 20.0%
!!! TATGGTATGTATTTTTAAGT+GGG - chr2_4:22311513-22311532 Msa0321180:CDS 20.0%
!! TTAACACTAAGTTATAGTTT+GGG + chr2_4:22311574-22311593 None:intergenic 20.0%
!! TTTAACACTAAGTTATAGTT+TGG + chr2_4:22311575-22311594 None:intergenic 20.0%
!!! TAAAGACATTTAAGATTTGT+TGG - chr2_4:22311591-22311610 Msa0321180:CDS 20.0%
!! GTTTGATATATAAAGATAGT+CGG + chr2_4:22311629-22311648 None:intergenic 20.0%
!!! ATAATATCTCATCCAATTTT+GGG + chr2_4:22311673-22311692 None:intergenic 20.0%
!! GATATTATGTATGTTATAAG+TGG - chr2_4:22311685-22311704 Msa0321180:CDS 20.0%
!! TATTATGTATGTTATAAGTG+GGG - chr2_4:22311687-22311706 Msa0321180:CDS 20.0%
!! TTAATTTAACCTTACAACAT+CGG + chr2_4:22311733-22311752 None:intergenic 20.0%
!!! TACGATAGTATTAATTTGAA+GGG + chr2_4:22311800-22311819 None:intergenic 20.0%
!!! TTACGATAGTATTAATTTGA+AGG + chr2_4:22311801-22311820 None:intergenic 20.0%
!! ATTTGACCTTTATACTAAAT+CGG - chr2_4:22311887-22311906 Msa0321180:CDS 20.0%
!!! TTAAAACCGATTTAGTATAA+AGG + chr2_4:22311896-22311915 None:intergenic 20.0%
!!! AATGTTTAGGGTTTAAATTT+TGG + chr2_4:22312326-22312345 None:intergenic 20.0%
!!! TTTCATAAGTTAGTTTAACA+AGG + chr2_4:22312399-22312418 None:intergenic 20.0%
!! ACTAACTTATGAAATATCAA+AGG - chr2_4:22312405-22312424 Msa0321180:intron 20.0%
!! TAAATAACCAAATCATATGA+AGG - chr2_4:22312851-22312870 Msa0321180:intron 20.0%
!! TAAAGCCTATTTACTTAAAT+AGG + chr2_4:22312992-22313011 None:intergenic 20.0%
!!! ACAATTTTATTAAACGAGTT+AGG - chr2_4:22313029-22313048 Msa0321180:intron 20.0%
!! ATAGAATTAATTCACAAGTA+GGG + chr2_4:22313119-22313138 None:intergenic 20.0%
!! AAACAATATATCTATTATGC+GGG + chr2_4:22313190-22313209 None:intergenic 20.0%
!! TAAACTTTAGTTAACACTTA+TGG - chr2_4:22313248-22313267 Msa0321180:intron 20.0%
!!! CAAACATAGTATTTTTAAGT+GGG + chr2_4:22313275-22313294 None:intergenic 20.0%
!!! TCAAACATAGTATTTTTAAG+TGG + chr2_4:22313276-22313295 None:intergenic 20.0%
!!! TGAAATCAACTAAAATTTTG+AGG - chr2_4:22313329-22313348 Msa0321180:intron 20.0%
!! TATCAAAAACAAAATTGGAT+AGG + chr2_4:22313548-22313567 None:intergenic 20.0%
!!! TTTTCATTTTTGATGGAAAT+GGG + chr2_4:22313573-22313592 None:intergenic 20.0%
!!! ATTGGTATTGAAATTGATAT+TGG + chr2_4:22313694-22313713 None:intergenic 20.0%
!! AAATTATTTCAGCTATGATA+TGG - chr2_4:22313727-22313746 Msa0321180:intron 20.0%
!! TCTAATATATTATATTCGTC+CGG + chr2_4:22313894-22313913 None:intergenic 20.0%
!! TTAGATTTAGTGAATCTAAT+TGG - chr2_4:22313909-22313928 Msa0321180:intron 20.0%
!!! AAAGATGATTTTTTGGTTTA+TGG - chr2_4:22313990-22314009 Msa0321180:intron 20.0%
! TTCAGAATCGAAGAAATAAA+TGG + chr2_4:22311102-22311121 None:intergenic 25.0%
!!! AAACATCGGTGTTTTTAAAT+CGG + chr2_4:22311147-22311166 None:intergenic 25.0%
! GTCTCACATTAGATATTATA+TGG - chr2_4:22311495-22311514 Msa0321180:CDS 25.0%
!!! ATGGTATGTATTTTTAAGTG+GGG - chr2_4:22311514-22311533 Msa0321180:CDS 25.0%
! TAACACTAAGTTATAGTTTG+GGG + chr2_4:22311573-22311592 None:intergenic 25.0%
!! CATAATATCTCATCCAATTT+TGG + chr2_4:22311674-22311693 None:intergenic 25.0%
! ATTATGTATGTTATAAGTGG+GGG - chr2_4:22311688-22311707 Msa0321180:CDS 25.0%
! TAATACTATCGTAAGTGAAT+CGG - chr2_4:22311807-22311826 Msa0321180:CDS 25.0%
!!! ATGGGTAAAACTTTTTTACA+TGG - chr2_4:22311950-22311969 Msa0321180:CDS 25.0%
!!! AAAACTTTTTTACATGGAGA+AGG - chr2_4:22311956-22311975 Msa0321180:CDS 25.0%
!! CATTTTGAATTGCATAACTT+GGG - chr2_4:22311998-22312017 Msa0321180:intron 25.0%
!! ATTTTGAATTGCATAACTTG+GGG - chr2_4:22311999-22312018 Msa0321180:intron 25.0%
! GTTCTGCAATTATAATTGTA+TGG - chr2_4:22312079-22312098 Msa0321180:intron 25.0%
! GATAAGGAGTAAAATGTTTA+GGG + chr2_4:22312338-22312357 None:intergenic 25.0%
! AGATAAGGAGTAAAATGTTT+AGG + chr2_4:22312339-22312358 None:intergenic 25.0%
! ATATCAAAGGACATAACATA+AGG - chr2_4:22312418-22312437 Msa0321180:intron 25.0%
! TGGTCTACTTCAAAAATTAT+AGG - chr2_4:22312605-22312624 Msa0321180:intron 25.0%
! TCTATACCTTAGTGTAAAAT+AGG + chr2_4:22312711-22312730 None:intergenic 25.0%
! AAGATTTCGTTATTTAGTAG+CGG + chr2_4:22312798-22312817 None:intergenic 25.0%
! TAAATAACGAAATCTTACGA+AGG - chr2_4:22312802-22312821 Msa0321180:intron 25.0%
!!! CTTTTTTTTAAGTCTTAGTC+TGG - chr2_4:22312966-22312985 Msa0321180:intron 25.0%
! ACTCGTTTAATAAAATTGTC+AGG + chr2_4:22313028-22313047 None:intergenic 25.0%
! TAGAATTAATTCACAAGTAG+GGG + chr2_4:22313118-22313137 None:intergenic 25.0%
! GATAGAATTAATTCACAAGT+AGG + chr2_4:22313120-22313139 None:intergenic 25.0%
! TAAAGTTTAGTTGACATTTC+TGG - chr2_4:22313162-22313181 Msa0321180:intron 25.0%
! AACAATATATCTATTATGCG+GGG + chr2_4:22313189-22313208 None:intergenic 25.0%
! ATTATTATATGATTGATCGG+TGG - chr2_4:22313304-22313323 Msa0321180:intron 25.0%
!!! CTTTTAATTTCATCACCAAA+TGG - chr2_4:22313454-22313473 Msa0321180:intron 25.0%
! GGGATTATCAAAAACAAAAT+TGG + chr2_4:22313553-22313572 None:intergenic 25.0%
!!! GTTTTCATTTTTGATGGAAA+TGG + chr2_4:22313574-22313593 None:intergenic 25.0%
!!! AACAACGTTTTCATTTTTGA+TGG + chr2_4:22313580-22313599 None:intergenic 25.0%
! ATCAAAAATGAAAACGTTGT+TGG - chr2_4:22313579-22313598 Msa0321180:intron 25.0%
! TCAAAAATGAAAACGTTGTT+GGG - chr2_4:22313580-22313599 Msa0321180:intron 25.0%
!!! TATTGGTTGTTTTTACCAAA+TGG + chr2_4:22313677-22313696 None:intergenic 25.0%
! AAATGTATAGCACAAATAAG+AGG - chr2_4:22313750-22313769 Msa0321180:intron 25.0%
! CTAATATATTATATTCGTCC+GGG + chr2_4:22313893-22313912 None:intergenic 25.0%
! AATTAACGAGAATTATGCAT+TGG - chr2_4:22313941-22313960 Msa0321180:intron 25.0%
! GAATTATGCATTGGAAAAAT+TGG - chr2_4:22313950-22313969 Msa0321180:intron 25.0%
!!! TGATGGAAAAGATGATTTTT+TGG - chr2_4:22313983-22314002 Msa0321180:intron 25.0%
! TTATATGGTGTAAAGCTTAA+TGG - chr2_4:22314050-22314069 Msa0321180:CDS 25.0%
! TATATGGTGTAAAGCTTAAT+GGG - chr2_4:22314051-22314070 Msa0321180:CDS 25.0%
! TTTCAAGCTTATATTTCAAC+TGG + chr2_4:22314214-22314233 None:intergenic 25.0%
! AATATAAGCTTGAAAGAGAA+TGG - chr2_4:22314219-22314238 Msa0321180:CDS 25.0%
! ATATAAGCTTGAAAGAGAAT+GGG - chr2_4:22314220-22314239 Msa0321180:CDS 25.0%
! TCAACAAACAAACAAACAAA+AGG + chr2_4:22314329-22314348 None:intergenic 25.0%
GTTGAAATTCTTGAACTTGA+AGG + chr2_4:22310990-22311009 None:intergenic 30.0%
TCAACAAATCCATGTAGTTT+AGG + chr2_4:22311058-22311077 None:intergenic 30.0%
AATCGAAGAAATAAATGGAC+CGG + chr2_4:22311097-22311116 None:intergenic 30.0%
!!! TGGTATGTATTTTTAAGTGG+GGG - chr2_4:22311515-22311534 Msa0321180:CDS 30.0%
! GAGTTTTACAAAATCGAAGA+TGG + chr2_4:22311548-22311567 None:intergenic 30.0%
TATAAAGATAGTCGGATAGA+AGG + chr2_4:22311621-22311640 None:intergenic 30.0%
GCTCTTAACACATATATAAG+TGG + chr2_4:22311651-22311670 None:intergenic 30.0%
TAACATGCATTGTTAGTTAG+TGG - chr2_4:22311834-22311853 Msa0321180:CDS 30.0%
ATTGTTAGTTAGTGGAAAGA+AGG - chr2_4:22311842-22311861 Msa0321180:CDS 30.0%
CCAAGTTATGCAATTCAAAA+TGG + chr2_4:22312000-22312019 None:intergenic 30.0%
! CCATTTTGAATTGCATAACT+TGG - chr2_4:22311997-22312016 Msa0321180:intron 30.0%
ATTGTATGGTTCGTCTAATA+TGG - chr2_4:22312093-22312112 Msa0321180:intron 30.0%
CTAGGAAATTAAAGGAGATA+AGG + chr2_4:22312354-22312373 None:intergenic 30.0%
TTGTTGAGCTAGGAAATTAA+AGG + chr2_4:22312362-22312381 None:intergenic 30.0%
ATATTTCATTCAACTCCTCT+TGG - chr2_4:22312446-22312465 Msa0321180:intron 30.0%
ATCACTAAAGGAAAGACAAA+AGG + chr2_4:22312474-22312493 None:intergenic 30.0%
! AGAATTGCTACTTGTGAATA+AGG - chr2_4:22312538-22312557 Msa0321180:intron 30.0%
! GAATTGCTACTTGTGAATAA+GGG - chr2_4:22312539-22312558 Msa0321180:intron 30.0%
TTAGTGTAAAATAGGCTTTC+AGG + chr2_4:22312703-22312722 None:intergenic 30.0%
! TGAAAGCCTATTTTACACTA+AGG - chr2_4:22312702-22312721 Msa0321180:intron 30.0%
CTATTTAGTAGTAGGCTTAT+AGG + chr2_4:22312738-22312757 None:intergenic 30.0%
CTATAAGCCTACTACTAAAT+AGG - chr2_4:22312736-22312755 Msa0321180:intron 30.0%
TCTGGCCTATTTAAGTAAAT+AGG - chr2_4:22312984-22313003 Msa0321180:intron 30.0%
! AGCCTATTTAAAGCTTAACT+TGG + chr2_4:22313055-22313074 None:intergenic 30.0%
!! AGTTAAGCTTTAAATAGGCT+AGG - chr2_4:22313055-22313074 Msa0321180:intron 30.0%
AGAATTAATTCACAAGTAGG+GGG + chr2_4:22313117-22313136 None:intergenic 30.0%
TTCTATCAGAGCAGAAAATT+TGG - chr2_4:22313133-22313152 Msa0321180:intron 30.0%
TCTATCAGAGCAGAAAATTT+GGG - chr2_4:22313134-22313153 Msa0321180:intron 30.0%
ACAAAATTGGATAGGAATTG+AGG + chr2_4:22313540-22313559 None:intergenic 30.0%
CAAAAATGAAAACGTTGTTG+GGG - chr2_4:22313581-22313600 Msa0321180:intron 30.0%
! TTTTTACCAAATGGTGAAGT+TGG + chr2_4:22313668-22313687 None:intergenic 30.0%
! TTCATTTTCAGCACATTTAG+AGG + chr2_4:22313823-22313842 None:intergenic 30.0%
! CTCAACAATATGTCATTTGT+TGG + chr2_4:22313849-22313868 None:intergenic 30.0%
TTATGCATTGGAAAAATTGG+TGG - chr2_4:22313953-22313972 Msa0321180:intron 30.0%
AAAGTTAACCTTTGTAGACT+TGG - chr2_4:22314016-22314035 Msa0321180:CDS 30.0%
! TTGGAAGAAGCTGATTTATA+TGG - chr2_4:22314035-22314054 Msa0321180:CDS 30.0%
TAATGGGAAGAAACCTATTA+TGG - chr2_4:22314067-22314086 Msa0321180:CDS 30.0%
AAATCACAATTCGCCATAAT+AGG + chr2_4:22314083-22314102 None:intergenic 30.0%
TTATTACCTTCATCATCTTC+TGG + chr2_4:22314149-22314168 None:intergenic 30.0%
GAAGATGATGAAGGTAATAA+TGG - chr2_4:22314149-22314168 Msa0321180:CDS 30.0%
TATAAGCTTGAAAGAGAATG+GGG - chr2_4:22314221-22314240 Msa0321180:CDS 30.0%
CTTATGTTGCTACTATGTAA+GGG - chr2_4:22314355-22314374 Msa0321180:CDS 30.0%
TATTTGCTCACTATCTTGTA+AGG - chr2_4:22314389-22314408 Msa0321180:CDS 30.0%
TAACCAAATATGGTGAGAGA+TGG + chr2_4:22310926-22310945 None:intergenic 35.0%
GAAATTCTTGAACTTGAAGG+AGG + chr2_4:22310987-22311006 None:intergenic 35.0%
TGAACACAACCTAAACTACA+TGG - chr2_4:22311046-22311065 Msa0321180:three_prime_UTR 35.0%
GCATCGTTGCATTTGATAAA+CGG + chr2_4:22311230-22311249 None:intergenic 35.0%
TTTATCAAATGCAACGATGC+AGG - chr2_4:22311230-22311249 Msa0321180:CDS 35.0%
AAAGGAGAAAAAGCAAGATC+AGG + chr2_4:22311356-22311375 None:intergenic 35.0%
!!! TGATCTTGCTTTTTCTCCTT+TGG - chr2_4:22311355-22311374 Msa0321180:CDS 35.0%
!!! TTCTCCTTTGGTTTTTGTCA+AGG - chr2_4:22311367-22311386 Msa0321180:CDS 35.0%
ATGTGTTAAGAGCCCAAAAT+TGG - chr2_4:22311658-22311677 Msa0321180:CDS 35.0%
AGTGGAAAGAAGGTTTACAT+TGG - chr2_4:22311852-22311871 Msa0321180:CDS 35.0%
GTGGAAAGAAGGTTTACATT+GGG - chr2_4:22311853-22311872 Msa0321180:CDS 35.0%
TGGAAAGAAGGTTTACATTG+GGG - chr2_4:22311854-22311873 Msa0321180:CDS 35.0%
TCATTGTGATATGCTGACAA+TGG - chr2_4:22311931-22311950 Msa0321180:CDS 35.0%
CATTGTGATATGCTGACAAT+GGG - chr2_4:22311932-22311951 Msa0321180:CDS 35.0%
ATGACATTGTGATAGCAAGA+GGG + chr2_4:22312501-22312520 None:intergenic 35.0%
AATGACATTGTGATAGCAAG+AGG + chr2_4:22312502-22312521 None:intergenic 35.0%
TTGTGAATAAGGGTGGAAAT+GGG - chr2_4:22312549-22312568 Msa0321180:intron 35.0%
!!! TTTTGAAGTAGACCAAGCTT+AGG + chr2_4:22312600-22312619 None:intergenic 35.0%
AAAAATTATAGGCCTGAGTC+TGG - chr2_4:22312616-22312635 Msa0321180:intron 35.0%
TCTGGTATATTATCCGTCAT+AGG - chr2_4:22312634-22312653 Msa0321180:intron 35.0%
TTTAGTAGTAGGCTTATAGG+TGG + chr2_4:22312735-22312754 None:intergenic 35.0%
AAATAGGCCAAAGCATATGA+AGG - chr2_4:22312752-22312771 Msa0321180:intron 35.0%
ACTCAAGCCTTCATATGATT+TGG + chr2_4:22312861-22312880 None:intergenic 35.0%
CATATGAAGGCTTGAGTTTA+TGG - chr2_4:22312864-22312883 Msa0321180:intron 35.0%
AAAAGCCTATTAAGTCCATG+AGG + chr2_4:22312951-22312970 None:intergenic 35.0%
!! GGCCAAGTTAAGCTTTAAAT+AGG - chr2_4:22313050-22313069 Msa0321180:intron 35.0%
AGTTCACGTGTTTCAAATGT+GGG - chr2_4:22313379-22313398 Msa0321180:intron 35.0%
!! CATGTGAAGAGATTTTGGTA+GGG + chr2_4:22313502-22313521 None:intergenic 35.0%
! TTTGGCATGTGAAGAGATTT+TGG + chr2_4:22313507-22313526 None:intergenic 35.0%
AATTGAGGTTTGGCAAGATT+TGG + chr2_4:22313525-22313544 None:intergenic 35.0%
ATTGGATAGGAATTGAGGTT+TGG + chr2_4:22313535-22313554 None:intergenic 35.0%
AAAACGTTGTTGGGGAATAT+TGG - chr2_4:22313589-22313608 Msa0321180:intron 35.0%
! TGATCTGAAATGTGTGACTA+GGG + chr2_4:22313638-22313657 None:intergenic 35.0%
TTGGAAAAATTGGTGGAGAA+AGG - chr2_4:22313960-22313979 Msa0321180:intron 35.0%
AATTGTGATTTACGTGGTGT+GGG - chr2_4:22314092-22314111 Msa0321180:CDS 35.0%
ATGATAACAGTTTCATTGCC+AGG - chr2_4:22314176-22314195 Msa0321180:CDS 35.0%
TGATAACAGTTTCATTGCCA+GGG - chr2_4:22314177-22314196 Msa0321180:CDS 35.0%
GCTTATGTTGCTACTATGTA+AGG - chr2_4:22314354-22314373 Msa0321180:CDS 35.0%
!! TGAGAGAAGTAGCTTTGGTT+GGG + chr2_4:22310884-22310903 None:intergenic 40.0%
!! ATGAGAGAAGTAGCTTTGGT+TGG + chr2_4:22310885-22310904 None:intergenic 40.0%
CAAGATGAGAGAAGTAGCTT+TGG + chr2_4:22310889-22310908 None:intergenic 40.0%
CAAATATGGTGAGAGATGGA+GGG + chr2_4:22310922-22310941 None:intergenic 40.0%
ATTCTTGAACTTGAAGGAGG+AGG + chr2_4:22310984-22311003 None:intergenic 40.0%
TGATGAAGCTTCACTATGTC+CGG - chr2_4:22311075-22311094 Msa0321180:three_prime_UTR 40.0%
!! TTCGATTCTGAAGCTGTTCA+AGG - chr2_4:22311110-22311129 Msa0321180:CDS 40.0%
AAATCCAGCAGTGGAAACAT+CGG + chr2_4:22311161-22311180 None:intergenic 40.0%
GCATTTGATAAACGGTCTAC+CGG + chr2_4:22311222-22311241 None:intergenic 40.0%
GCATTGTGATAAAACGCTGA+GGG - chr2_4:22311271-22311290 Msa0321180:CDS 40.0%
AGGGAATGGTTGGATGAAAA+TGG - chr2_4:22311290-22311309 Msa0321180:CDS 40.0%
GGGAATGGTTGGATGAAAAT+GGG - chr2_4:22311291-22311310 Msa0321180:CDS 40.0%
CTTGTTCATGATCATGTGCT+TGG - chr2_4:22311329-22311348 Msa0321180:CDS 40.0%
CGTACCTTGACAAAAACCAA+AGG + chr2_4:22311374-22311393 None:intergenic 40.0%
AAAGATAGTCGGATAGAAGG+TGG + chr2_4:22311618-22311637 None:intergenic 40.0%
!! CCTTACAACATCGGTTTGTA+AGG + chr2_4:22311724-22311743 None:intergenic 40.0%
CCTTACAAACCGATGTTGTA+AGG - chr2_4:22311721-22311740 Msa0321180:CDS 40.0%
GAAAGACAAAAGGTTCCAAG+AGG + chr2_4:22312464-22312483 None:intergenic 40.0%
! TTGCTACTTGTGAATAAGGG+TGG - chr2_4:22312542-22312561 Msa0321180:intron 40.0%
CTTGTGAATAAGGGTGGAAA+TGG - chr2_4:22312548-22312567 Msa0321180:intron 40.0%
ACGGATAATATACCAGACTC+AGG + chr2_4:22312631-22312650 None:intergenic 40.0%
ACCTTGAAATGAGCCTATGA+CGG + chr2_4:22312650-22312669 None:intergenic 40.0%
CATAGGCTCATTTCAAGGTA+TGG - chr2_4:22312651-22312670 Msa0321180:intron 40.0%
! GGTATGGTCTGACCTTTTAA+AGG - chr2_4:22312667-22312686 Msa0321180:intron 40.0%
GGCTTCATCAGACCTTTAAA+AGG + chr2_4:22312682-22312701 None:intergenic 40.0%
GCTTTGGCCTATTTAGTAGT+AGG + chr2_4:22312746-22312765 None:intergenic 40.0%
GTTTAGGCCTTCATATGCTT+TGG + chr2_4:22312762-22312781 None:intergenic 40.0%
CTTTAAATAGGCTAGGTCGT+AGG - chr2_4:22313062-22313081 Msa0321180:intron 40.0%
TTAATTCACAAGTAGGGGGT+GGG + chr2_4:22313113-22313132 None:intergenic 40.0%
ATTAATTCACAAGTAGGGGG+TGG + chr2_4:22313114-22313133 None:intergenic 40.0%
CAGTTCACGTGTTTCAAATG+TGG - chr2_4:22313378-22313397 Msa0321180:intron 40.0%
GTTCACGTGTTTCAAATGTG+GGG - chr2_4:22313380-22313399 Msa0321180:intron 40.0%
TTCACGTGTTTCAAATGTGG+GGG - chr2_4:22313381-22313400 Msa0321180:intron 40.0%
ACTCTCTGTAGGACTAAGTT+GGG - chr2_4:22313404-22313423 Msa0321180:intron 40.0%
AGCTAGTATGTGACTCCATT+TGG + chr2_4:22313472-22313491 None:intergenic 40.0%
AAATGGAGTCACATACTAGC+TGG - chr2_4:22313471-22313490 Msa0321180:intron 40.0%
!! GCATGTGAAGAGATTTTGGT+AGG + chr2_4:22313503-22313522 None:intergenic 40.0%
! GTGATCTGAAATGTGTGACT+AGG + chr2_4:22313639-22313658 None:intergenic 40.0%
TTCTAGCCAACTTCACCATT+TGG - chr2_4:22313659-22313678 Msa0321180:intron 40.0%
GCACAAATAAGAGGTGACAT+TGG - chr2_4:22313759-22313778 Msa0321180:intron 40.0%
GTACATATTGTCACAACCCT+AGG + chr2_4:22313786-22313805 None:intergenic 40.0%
AATCGAAACAAATTTGCGCC+CGG - chr2_4:22313872-22313891 Msa0321180:intron 40.0%
AAATTGGTGGAGAAAGGTGA+TGG - chr2_4:22313966-22313985 Msa0321180:intron 40.0%
AGCTTCTTCCAAGTCTACAA+AGG + chr2_4:22314027-22314046 None:intergenic 40.0%
ATGGCGAATTGTGATTTACG+TGG - chr2_4:22314086-22314105 Msa0321180:CDS 40.0%
GAATTGTGATTTACGTGGTG+TGG - chr2_4:22314091-22314110 Msa0321180:CDS 40.0%
!!! GAGTTGTTTTGGTTCTTCCA+GGG - chr2_4:22314123-22314142 Msa0321180:CDS 40.0%
!! AGAGAAGTAGCTTTGGTTGG+GGG + chr2_4:22310882-22310901 None:intergenic 45.0%
!! GAGAGAAGTAGCTTTGGTTG+GGG + chr2_4:22310883-22310902 None:intergenic 45.0%
CCAAATATGGTGAGAGATGG+AGG + chr2_4:22310923-22310942 None:intergenic 45.0%
CCTCCATCTCTCACCATATT+TGG - chr2_4:22310920-22310939 Msa0321180:three_prime_UTR 45.0%
!! GGAGGAGGTGCTTCTAAATT+GGG + chr2_4:22310969-22310988 None:intergenic 45.0%
!! AGGAGGAGGTGCTTCTAAAT+TGG + chr2_4:22310970-22310989 None:intergenic 45.0%
ACACCACGAGGTGAAGAAAA+AGG - chr2_4:22311023-22311042 Msa0321180:three_prime_UTR 45.0%
! TCACCTTTTTCTTCACCTCG+TGG + chr2_4:22311029-22311048 None:intergenic 45.0%
GATTTGTACTCGCATGTTGC+CGG - chr2_4:22311176-22311195 Msa0321180:CDS 45.0%
TTCGGCTATTCTAACTCGAC+CGG + chr2_4:22311198-22311217 None:intergenic 45.0%
CGAGTTAGAATAGCCGAATC+CGG - chr2_4:22311200-22311219 Msa0321180:CDS 45.0%
GATAAACGGTCTACCGGATT+CGG + chr2_4:22311216-22311235 None:intergenic 45.0%
CGCATTGTGATAAAACGCTG+AGG - chr2_4:22311270-22311289 Msa0321180:CDS 45.0%
GTGATAAAACGCTGAGGGAA+TGG - chr2_4:22311276-22311295 Msa0321180:CDS 45.0%
TAAAACGCTGAGGGAATGGT+TGG - chr2_4:22311280-22311299 Msa0321180:CDS 45.0%
GTAGCTCACTTTGTTGAGCT+AGG + chr2_4:22312372-22312391 None:intergenic 45.0%
CAAGAGGGCTTGATCACTAA+AGG + chr2_4:22312486-22312505 None:intergenic 45.0%
! AATAAGGGTGGAAATGGGCT+AGG - chr2_4:22312554-22312573 Msa0321180:intron 45.0%
! GGCTTTATAAGGCCTAAGCT+TGG - chr2_4:22312585-22312604 Msa0321180:intron 45.0%
TCCGTCATAGGCTCATTTCA+AGG - chr2_4:22312646-22312665 Msa0321180:intron 45.0%
AAGGCCTAAACCACACGAAT+AGG - chr2_4:22312771-22312790 Msa0321180:intron 45.0%
AGGCCTAAACCACACGAATA+GGG - chr2_4:22312772-22312791 Msa0321180:intron 45.0%
AGCTTAATAGGTCAGCCTCA+TGG - chr2_4:22312933-22312952 Msa0321180:intron 45.0%
GTCAGCCTCATGGACTTAAT+AGG - chr2_4:22312943-22312962 Msa0321180:intron 45.0%
GACTCTCTGTAGGACTAAGT+TGG - chr2_4:22313403-22313422 Msa0321180:intron 45.0%
! CTAAGTTGGGCTCACATTCT+TGG - chr2_4:22313417-22313436 Msa0321180:intron 45.0%
TAAGAGGTGACATTGGACCT+AGG - chr2_4:22313766-22313785 Msa0321180:intron 45.0%
AAGAGGTGACATTGGACCTA+GGG - chr2_4:22313767-22313786 Msa0321180:intron 45.0%
! GGGTGATCAAGGAGTTGTTT+TGG - chr2_4:22314112-22314131 Msa0321180:CDS 45.0%
!!! GGAGTTGTTTTGGTTCTTCC+AGG - chr2_4:22314122-22314141 Msa0321180:CDS 45.0%
AACTGGTCAAGTTCTTTCCC+TGG + chr2_4:22314197-22314216 None:intergenic 45.0%
!!! TAATTAATTTGTAAAAAAAA+AGG + chr2_4:22312058-22312077 None:intergenic 5.0%
!! TCGTGGTGTTGCTGGAACAA+CGG + chr2_4:22311012-22311031 None:intergenic 50.0%
AACACCGATGTTTCCACTGC+TGG - chr2_4:22311154-22311173 Msa0321180:CDS 50.0%
TGCGAGTACAAATCCAGCAG+TGG + chr2_4:22311170-22311189 None:intergenic 50.0%
AAATGTGGGGGACTCTCTGT+AGG - chr2_4:22313393-22313412 Msa0321180:intron 50.0%
TTACGTGGTGTGGGTGATCA+AGG - chr2_4:22314101-22314120 Msa0321180:CDS 50.0%
GTTGTTCCAGCAACACCACG+AGG - chr2_4:22311011-22311030 Msa0321180:three_prime_UTR 55.0%
!! TCTTCACCTCGTGGTGTTGC+TGG + chr2_4:22311020-22311039 None:intergenic 55.0%
!! AGGGTGGAAATGGGCTAGGT+CGG - chr2_4:22312558-22312577 Msa0321180:intron 55.0%
! AGGTCGGGTCGGGCTTTATA+AGG - chr2_4:22312574-22312593 Msa0321180:intron 55.0%
CGGCCCTATTCGTGTGGTTT+AGG + chr2_4:22312778-22312797 None:intergenic 55.0%
TAGTAGCGGCCCTATTCGTG+TGG + chr2_4:22312784-22312803 None:intergenic 55.0%
CTAGGTCGTAGGCCTCTGTT+GGG - chr2_4:22313073-22313092 Msa0321180:intron 55.0%
CCTTCATCATCTTCTGGCCC+TGG + chr2_4:22314143-22314162 None:intergenic 55.0%
CCAGGGCCAGAAGATGATGA+AGG - chr2_4:22314140-22314159 Msa0321180:CDS 55.0%
!! GGGTGGAAATGGGCTAGGTC+GGG - chr2_4:22312559-22312578 Msa0321180:intron 60.0%
!! GGAAATGGGCTAGGTCGGGT+CGG - chr2_4:22312563-22312582 Msa0321180:intron 60.0%
!! GAAATGGGCTAGGTCGGGTC+GGG - chr2_4:22312564-22312583 Msa0321180:intron 60.0%
GCTAGGTCGTAGGCCTCTGT+TGG - chr2_4:22313072-22313091 Msa0321180:intron 60.0%
TAGGCCTCTGTTGGGCGGTT+TGG - chr2_4:22313081-22313100 Msa0321180:intron 60.0%
CATGCCAAACCGCCCAACAG+AGG + chr2_4:22313088-22313107 None:intergenic 60.0%
CGATGCAGGCGTGCGAATCG+CGG - chr2_4:22311244-22311263 Msa0321180:CDS 65.0%
GGTCGTAGGCCTCTGTTGGG+CGG - chr2_4:22313076-22313095 Msa0321180:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 22310864 22314519 22310864 ID=Msa0321180;Name=Msa0321180
chr2_4 mRNA 22310864 22314519 22310864 ID=Msa0321180-mRNA-1;Parent=Msa0321180;Name=Msa0321180-mRNA-1;_AED=0.00;_eAED=0.00;_QI=90|1|1|1|1|1|2|245|442
chr2_4 exon 22310864 22312002 22310864 ID=Msa0321180-mRNA-1:exon:8228;Parent=Msa0321180-mRNA-1
chr2_4 exon 22313995 22314519 22313995 ID=Msa0321180-mRNA-1:exon:8227;Parent=Msa0321180-mRNA-1
chr2_4 five_prime_UTR 22314430 22314519 22314430 ID=Msa0321180-mRNA-1:five_prime_utr;Parent=Msa0321180-mRNA-1
chr2_4 CDS 22313995 22314429 22313995 ID=Msa0321180-mRNA-1:cds;Parent=Msa0321180-mRNA-1
chr2_4 CDS 22311109 22312002 22311109 ID=Msa0321180-mRNA-1:cds;Parent=Msa0321180-mRNA-1
chr2_4 three_prime_UTR 22310864 22311108 22310864 ID=Msa0321180-mRNA-1:three_prime_utr;Parent=Msa0321180-mRNA-1
Gene Sequence

>Msa0321180

ATGGGTTCACTACCCAATTTAGAAGCACCTCCTCCTTCAAGTTCAAGAATTTCAACCGTTGTTCCAGCAACACCACGAGGTGAAGAAAAAGGTGAACACAACCTAAACTACATGGATTTGTTGATGAAGCTTCACTATGTCCGGTCCATTTATTTCTTCGATTCTGAAGCTGTTCAAGGCCTTACAATATCCGATTTAAAAACACCGATGTTTCCACTGCTGGATTTGTACTCGCATGTTGCCGGTCGAGTTAGAATAGCCGAATCCGGTAGACCGTTTATCAAATGCAACGATGCAGGCGTGCGAATCGCGGAGTCGCATTGTGATAAAACGCTGAGGGAATGGTTGGATGAAAATGGGTATTCAGTTGATGAACTTGTTCATGATCATGTGCTTGGTCCTGATCTTGCTTTTTCTCCTTTGGTTTTTGTCAAGTTCACGTGTTTCAAATGTGGGGGACTCTCTGTAGGACTAAGTTGGGCTCACATTCTTGGAGATGCATTTTCAGCTTTTAATTTCATCACCAAATGGAGTCACATACTAGCTGGTCAATCCCTACCAAAATCTCTTCACATGCCAAATCTTGCCAAACCTCAATTCCTATCCAATTTTGTTTTTGATAATCCCATTTCCATCAAAAATGAAAACGTTGTTGGGGAATATTGGCTTGCTGCAAATGATTGTTATGTCCCTAGTCACACATTTCAGATCACTTCTAGCCAACTTCACCATTTGGTAAAAACAACCAATATCAATTTCAATACCAATACTAAGTATTTTGAAATTATTTCAGCTATGATATGGAAATGTATAGCACAAATAAGAGGTGACATTGGACCTAGGGTTGTGACAATATGTACTAAAAATAAAAATACCTCTAAATGTGCTGAAAATGAATTTCCAACAAATGACATATTGTTGAGCAAAATCGAAACAAATTTGCGCCCGGACGAATATAATATATTAGATTTAGTGAATCTAATTGGTGAGAAAAAAATTAACGAGAATTATGCATTGGAAAAATTGGTGGAGAAAGGTGATGGAAAAGATGATTTTTTGGTTTATGGAGCAAAGTTAACCTTTGTAGACTTGGAAGAAGCTGATTTATATGGTGTAAAGCTTAATGGGAAGAAACCTATTATGGCGAATTGTGATTTACGTGGTGTGGGTGATCAAGGAGTTGTTTTGGTTCTTCCAGGGCCAGAAGATGATGAAGGTAATAATGGAAGAATGATAACAGTTTCATTGCCAGGGAAAGAACTTGACCAGTTGAAATATAAGCTTGAAAGAGAATGGGGTATACAACATTATGCAAGTCTACAATTTTAA

Protein sequence

>Msa0321180

MGSLPNLEAPPPSSSRISTVVPATPRGEEKGEHNLNYMDLLMKLHYVRSIYFFDSEAVQGLTISDLKTPMFPLLDLYSHVAGRVRIAESGRPFIKCNDAGVRIAESHCDKTLREWLDENGYSVDELVHDHVLGPDLAFSPLVFVKFTCFKCGGLSVGLSWAHILGDAFSAFNFITKWSHILAGQSLPKSLHMPNLAKPQFLSNFVFDNPISIKNENVVGEYWLAANDCYVPSHTFQITSSQLHHLVKTTNINFNTNTKYFEIISAMIWKCIAQIRGDIGPRVVTICTKNKNTSKCAENEFPTNDILLSKIETNLRPDEYNILDLVNLIGEKKINENYALEKLVEKGDGKDDFLVYGAKLTFVDLEEADLYGVKLNGKKPIMANCDLRGVGDQGVVLVLPGPEDDEGNNGRMITVSLPGKELDQLKYKLEREWGIQHYASLQF*