AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0321200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0321200 MtrunA17_Chr2g0298091 94.344 442 25 0 1 442 1 442 0.0 863
Msa0321200 MtrunA17_Chr3g0132831 77.878 443 92 3 1 440 1 440 0.0 709
Msa0321200 MtrunA17_Chr1g0163441 72.146 438 117 3 1 436 1 435 0.0 635
Msa0321200 MtrunA17_Chr8g0378151 41.121 428 219 9 16 429 16 424 6.44e-98 300
Msa0321200 MtrunA17_Chr7g0274021 25.397 441 276 18 19 424 15 437 2.33e-27 113
Msa0321200 MtrunA17_Chr1g0148851 25.355 422 266 12 35 424 27 431 1.97e-24 105
Msa0321200 MtrunA17_Chr8g0376901 24.549 277 169 9 19 276 10 265 7.10e-15 76.3
Msa0321200 MtrunA17_Chr8g0376891 28.916 166 110 4 19 180 10 171 2.48e-13 71.6
Msa0321200 MtrunA17_Chr3g0087401 27.599 279 171 10 19 275 9 278 4.10e-13 70.9
Msa0321200 MtrunA17_Chr2g0334001 24.444 270 182 10 19 276 10 269 5.88e-13 70.5
Msa0321200 MtrunA17_Chr8g0386141 25.368 272 174 9 18 273 13 271 6.52e-13 70.5
Msa0321200 MtrunA17_Chr4g0072041 24.000 275 162 9 31 276 31 287 8.09e-13 70.1
Msa0321200 MtrunA17_Chr7g0253541 29.018 224 143 6 66 275 60 281 1.32e-12 69.3
Msa0321200 MtrunA17_Chr5g0438721 30.000 120 78 3 63 180 6 121 2.19e-12 64.3
Msa0321200 MtrunA17_Chr5g0408911 27.572 243 159 10 34 269 40 272 4.55e-12 67.8
Msa0321200 MtrunA17_Chr4g0004691 27.815 151 103 2 39 186 29 176 5.04e-12 64.7
Msa0321200 MtrunA17_Chr4g0001861 24.820 278 177 11 16 275 6 269 5.45e-12 67.4
Msa0321200 MtrunA17_Chr4g0054081 22.378 429 255 17 31 404 26 431 2.19e-11 65.5
Msa0321200 MtrunA17_Chr7g0252731 23.723 274 182 8 16 272 21 284 2.69e-11 65.1
Msa0321200 MtrunA17_Chr8g0371821 24.793 242 153 9 49 273 38 267 3.96e-11 64.7
Msa0321200 MtrunA17_Chr8g0376911 24.907 269 171 12 20 273 11 263 6.53e-11 63.9
Msa0321200 MtrunA17_Chr3g0123061 23.019 265 152 11 20 268 13 241 6.92e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0321200 AT4G24510.1 39.679 436 223 13 7 425 1 413 3.22e-100 306
Msa0321200 AT4G13840.1 37.441 422 250 8 11 430 13 422 5.87e-92 285
Msa0321200 AT3G23840.1 37.097 434 247 11 1 430 1 412 2.36e-89 278
Msa0321200 AT4G29250.1 24.306 432 272 18 23 419 23 434 3.31e-19 90.1
Msa0321200 AT2G19070.1 25.763 295 189 9 19 291 11 297 1.91e-17 84.7
Msa0321200 AT3G48720.1 30.345 145 96 4 47 186 41 185 1.49e-12 69.7
Msa0321200 AT5G47950.1 26.693 251 154 9 34 277 28 255 8.26e-12 67.4
Msa0321200 AT5G41040.1 26.122 245 147 9 47 270 65 296 8.41e-12 67.4
Msa0321200 AT5G41040.2 26.230 244 146 9 47 269 49 279 9.04e-12 67.0
Msa0321200 AT1G24420.2 21.691 272 188 8 20 281 13 269 2.21e-11 65.9
Msa0321200 AT1G24420.1 21.691 272 188 8 20 281 13 269 2.21e-11 65.9
Msa0321200 AT5G63560.1 24.706 255 177 9 30 276 25 272 3.01e-11 65.5
Msa0321200 AT1G24430.1 23.466 277 186 10 33 303 27 283 3.38e-11 65.5

Find 104 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTGGTTATCTTGAAAA+TGG 0.179205 2_4:-22336981 Msa0321200:exon
CCTCCATCTCTCACCATATT+TGG 0.208293 2_4:-22336996 Msa0321200:five_prime_UTR
AGGAGGAGGTGCTTCTAAAT+TGG 0.232854 2_4:+22336949 None:intergenic
AGGGAATGGTTGGATGAAAA+TGG 0.238554 2_4:-22336626 Msa0321200:CDS
TTATATGGTGTAAAGCTTAA+TGG 0.239149 2_4:-22333866 Msa0321200:CDS
TTTGGCATGTGAAGAGATTT+TGG 0.255083 2_4:+22334412 None:intergenic
TTATTACCTTCATCATCTTC+TGG 0.255759 2_4:+22333770 None:intergenic
AAATTATTTCAGCTATGATA+TGG 0.259708 2_4:-22334189 Msa0321200:CDS
AAAACGTTGTTGGGGAATAT+TGG 0.274682 2_4:-22334327 Msa0321200:CDS
TCTTCACCTCGTGGTGTTGC+TGG 0.285592 2_4:+22336899 None:intergenic
TTAGATTTAGTGAATCTAAT+TGG 0.286165 2_4:-22334007 Msa0321200:CDS
TCAACAAATCCATGTAGTTT+AGG 0.289089 2_4:+22336861 None:intergenic
AAATCACAATTCGCCATAAT+AGG 0.292583 2_4:+22333836 None:intergenic
CTCAACAATATGTCATTTGT+TGG 0.297897 2_4:+22334070 None:intergenic
CTAAGTTGGGCTCACATTCT+TGG 0.303327 2_4:-22334499 Msa0321200:CDS
TATATGGTGTAAAGCTTAAT+GGG 0.312250 2_4:-22333865 Msa0321200:CDS
AATTGAGGTTTGGCAAGATT+TGG 0.323567 2_4:+22334394 None:intergenic
TTGGAAGAAGCTGATTTATA+TGG 0.336966 2_4:-22333881 Msa0321200:CDS
TTCGATTCTGAAGCTGTTCA+AGG 0.344410 2_4:-22336806 Msa0321200:CDS
GATAAACGGTCTACCGGATT+CGG 0.346628 2_4:+22336703 None:intergenic
TTCAGAATCGAAGAAATAAA+TGG 0.359775 2_4:+22336817 None:intergenic
ATTGGTATTGAAATTGATAT+TGG 0.366519 2_4:+22334225 None:intergenic
ACACCACGAGGTGAAGAAAA+AGG 0.368645 2_4:-22336893 Msa0321200:CDS
CAAGATGAGAGAAGTAGCTT+TGG 0.368751 2_4:+22337030 None:intergenic
GATTTGTACTCGCATGTTGC+CGG 0.368832 2_4:-22336740 Msa0321200:CDS
TTCTAGCCAACTTCACCATT+TGG 0.381913 2_4:-22334257 Msa0321200:CDS
GCTTATGTTGCTACTATGTA+AGG 0.382018 2_4:-22333562 Msa0321200:three_prime_UTR
GAAGATGATGAAGGTAATAA+TGG 0.382087 2_4:-22333767 Msa0321200:CDS
AACACCGATGTTTCCACTGC+TGG 0.384086 2_4:-22336762 Msa0321200:CDS
TAATGGGAAGAAACCTATTA+TGG 0.385797 2_4:-22333849 Msa0321200:CDS
AGCTAGTATGTGACTCCATT+TGG 0.386476 2_4:+22334447 None:intergenic
ACAAAATTGGATAGGAATTG+AGG 0.389132 2_4:+22334379 None:intergenic
GACTCTCTGTAGGACTAAGT+TGG 0.389788 2_4:-22334513 Msa0321200:CDS
GTTGAAATTCTTGAACTTGA+AGG 0.392731 2_4:+22336929 None:intergenic
TGAGAGAAGTAGCTTTGGTT+GGG 0.393211 2_4:+22337035 None:intergenic
TTTCAAGCTTATATTTCAAC+TGG 0.396814 2_4:+22333705 None:intergenic
GCATCGTTGCATTTGATAAA+CGG 0.398176 2_4:+22336689 None:intergenic
ATTGGATAGGAATTGAGGTT+TGG 0.406081 2_4:+22334384 None:intergenic
TATTTGCTCACTATCTTGTA+AGG 0.408093 2_4:-22333527 Msa0321200:three_prime_UTR
AATATAAGCTTGAAAGAGAA+TGG 0.417995 2_4:-22333697 Msa0321200:CDS
TATTTGGTTATCTTGAAAAT+GGG 0.430381 2_4:-22336980 Msa0321200:exon
GGGTGATCAAGGAGTTGTTT+TGG 0.437631 2_4:-22333804 Msa0321200:CDS
CAGTTCACGTGTTTCAAATG+TGG 0.438540 2_4:-22334538 Msa0321200:CDS
TCTAATATATTATATTCGTC+CGG 0.438576 2_4:+22334025 None:intergenic
ATGATAACAGTTTCATTGCC+AGG 0.440593 2_4:-22333740 Msa0321200:CDS
ACATTTATGAAATTATTGTA+TGG 0.442425 2_4:-22333489 Msa0321200:three_prime_UTR
CCTTCATCATCTTCTGGCCC+TGG 0.445345 2_4:+22333776 None:intergenic
AATTTCAAAATACTTAGTAT+TGG 0.449681 2_4:+22334207 None:intergenic
ATATAAGCTTGAAAGAGAAT+GGG 0.453313 2_4:-22333696 Msa0321200:CDS
AACTGGTCAAGTTCTTTCCC+TGG 0.458794 2_4:+22333722 None:intergenic
GGAGGAGGTGCTTCTAAATT+GGG 0.461109 2_4:+22336950 None:intergenic
TGATGAAGCTTCACTATGTC+CGG 0.472252 2_4:-22336841 Msa0321200:CDS
ACTCTCTGTAGGACTAAGTT+GGG 0.477168 2_4:-22334512 Msa0321200:CDS
TTTATCAAATGCAACGATGC+AGG 0.480796 2_4:-22336686 Msa0321200:CDS
CCAAATATGGTGAGAGATGG+AGG 0.494423 2_4:+22336996 None:intergenic
AGTTCACGTGTTTCAAATGT+GGG 0.497596 2_4:-22334537 Msa0321200:CDS
TCAACAAACAAACAAACAAA+AGG 0.499973 2_4:+22333590 None:intergenic
ATGAGAGAAGTAGCTTTGGT+TGG 0.502451 2_4:+22337034 None:intergenic
CTTGTTCATGATCATGTGCT+TGG 0.507531 2_4:-22336587 Msa0321200:CDS
GGGAATGGTTGGATGAAAAT+GGG 0.510486 2_4:-22336625 Msa0321200:CDS
AATTAACGAGAATTATGCAT+TGG 0.510910 2_4:-22333975 Msa0321200:CDS
AAAGTTAACCTTTGTAGACT+TGG 0.517976 2_4:-22333900 Msa0321200:CDS
GCATTTGATAAACGGTCTAC+CGG 0.524003 2_4:+22336697 None:intergenic
TTACGTGGTGTGGGTGATCA+AGG 0.528901 2_4:-22333815 Msa0321200:CDS
CTTATGTTGCTACTATGTAA+GGG 0.531130 2_4:-22333561 Msa0321200:three_prime_UTR
CGAGTTAGAATAGCCGAATC+CGG 0.533458 2_4:-22336716 Msa0321200:CDS
GAGAGAAGTAGCTTTGGTTG+GGG 0.537346 2_4:+22337036 None:intergenic
TGATAACAGTTTCATTGCCA+GGG 0.539695 2_4:-22333739 Msa0321200:CDS
GTGATAAAACGCTGAGGGAA+TGG 0.545873 2_4:-22336640 Msa0321200:CDS
CTAATATATTATATTCGTCC+GGG 0.554744 2_4:+22334026 None:intergenic
TTCGGCTATTCTAACTCGAC+CGG 0.556767 2_4:+22336721 None:intergenic
AATCGAAGAAATAAATGGAC+CGG 0.556767 2_4:+22336822 None:intergenic
TAACCAAATATGGTGAGAGA+TGG 0.557548 2_4:+22336993 None:intergenic
AAGAGGTGACATTGGACCTA+GGG 0.560954 2_4:-22334149 Msa0321200:CDS
GAATTGTGATTTACGTGGTG+TGG 0.567473 2_4:-22333825 Msa0321200:CDS
AAATGTATAGCACAAATAAG+AGG 0.570051 2_4:-22334166 Msa0321200:CDS
ATTCTTGAACTTGAAGGAGG+AGG 0.570601 2_4:+22336935 None:intergenic
AAATGGAGTCACATACTAGC+TGG 0.573672 2_4:-22334445 Msa0321200:CDS
GAAATTCTTGAACTTGAAGG+AGG 0.575868 2_4:+22336932 None:intergenic
AATCGAAACAAATTTGCGCC+CGG 0.576389 2_4:-22334044 Msa0321200:CDS
CGATGCAGGCGTGCGAATCG+CGG 0.576399 2_4:-22336672 Msa0321200:CDS
TGAACACAACCTAAACTACA+TGG 0.576874 2_4:-22336870 Msa0321200:CDS
AATTGTGATTTACGTGGTGT+GGG 0.577058 2_4:-22333824 Msa0321200:CDS
GTACATATTGTCACAACCCT+AGG 0.578375 2_4:+22334133 None:intergenic
TAAAACGCTGAGGGAATGGT+TGG 0.584184 2_4:-22336636 Msa0321200:CDS
TAAGAGGTGACATTGGACCT+AGG 0.589061 2_4:-22334150 Msa0321200:CDS
TATAAGCTTGAAAGAGAATG+GGG 0.591321 2_4:-22333695 Msa0321200:CDS
TCGTGGTGTTGCTGGAACAA+CGG 0.592050 2_4:+22336907 None:intergenic
AAATTGGTGGAGAAAGGTGA+TGG 0.594488 2_4:-22333950 Msa0321200:CDS
GTGATCTGAAATGTGTGACT+AGG 0.599482 2_4:+22334280 None:intergenic
GCACAAATAAGAGGTGACAT+TGG 0.605683 2_4:-22334157 Msa0321200:CDS
TTCACGTGTTTCAAATGTGG+GGG 0.607666 2_4:-22334535 Msa0321200:CDS
CAAATATGGTGAGAGATGGA+GGG 0.610138 2_4:+22336997 None:intergenic
CCAGGGCCAGAAGATGATGA+AGG 0.612665 2_4:-22333776 Msa0321200:CDS
AGCTTCTTCCAAGTCTACAA+AGG 0.615139 2_4:+22333892 None:intergenic
TGATCTGAAATGTGTGACTA+GGG 0.617417 2_4:+22334281 None:intergenic
AGAGAAGTAGCTTTGGTTGG+GGG 0.628854 2_4:+22337037 None:intergenic
GTTCACGTGTTTCAAATGTG+GGG 0.631051 2_4:-22334536 Msa0321200:CDS
TGCGAGTACAAATCCAGCAG+TGG 0.640512 2_4:+22336749 None:intergenic
AAATCCAGCAGTGGAAACAT+CGG 0.641078 2_4:+22336758 None:intergenic
CGCATTGTGATAAAACGCTG+AGG 0.641466 2_4:-22336646 Msa0321200:CDS
GCATTGTGATAAAACGCTGA+GGG 0.658570 2_4:-22336645 Msa0321200:CDS
ATGGCGAATTGTGATTTACG+TGG 0.721025 2_4:-22333830 Msa0321200:CDS
GTTGTTCCAGCAACACCACG+AGG 0.756952 2_4:-22336905 Msa0321200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTATTTGATAAATTAG+CGG - chr2_4:22334765-22334784 Msa0321200:intron 10.0%
!! TTATATATAAAAAGCTTAAT+AGG - chr2_4:22335476-22335495 Msa0321200:intron 10.0%
!! TATATTATTATATGATTGAT+CGG - chr2_4:22335856-22335875 Msa0321200:intron 10.0%
!!! TATTGATAAATTGAGATTTT+AGG - chr2_4:22334016-22334035 Msa0321200:CDS 15.0%
!! ATATTATGTATGTTATAAGT+GGG - chr2_4:22334241-22334260 Msa0321200:CDS 15.0%
!! CAATGTAAAATATTAGAATT+TGG + chr2_4:22334317-22334336 None:intergenic 15.0%
!! AAAATCAACAATATCAATAA+TGG - chr2_4:22335445-22335464 Msa0321200:intron 15.0%
!! AAAACAATATATCTATTATG+CGG + chr2_4:22335746-22335765 None:intergenic 15.0%
!!! ATACTCAAAATTTCTTTTTT+TGG + chr2_4:22335781-22335800 None:intergenic 15.0%
!! AATTTCAAAATACTTAGTAT+TGG + chr2_4:22336267-22336286 None:intergenic 15.0%
!! ACATTTATGAAATTATTGTA+TGG - chr2_4:22336982-22337001 Msa0321200:exon 15.0%
!!! ATTTTCAAGATAACCAAATA+TGG + chr2_4:22333491-22333510 None:intergenic 20.0%
!! ATATTTGGTTATCTTGAAAA+TGG - chr2_4:22333490-22333509 Msa0321200:three_prime_UTR 20.0%
!! TATTTGGTTATCTTGAAAAT+GGG - chr2_4:22333491-22333510 Msa0321200:three_prime_UTR 20.0%
!!! TTTTTAAATCGGATATTGTA+AGG + chr2_4:22333691-22333710 None:intergenic 20.0%
!! AATAATATGATGAAAGAAGT+AGG + chr2_4:22333982-22334001 None:intergenic 20.0%
!! ATCTCAATTTATCAATAACA+CGG + chr2_4:22334013-22334032 None:intergenic 20.0%
!!! TAAATTGAGATTTTAGGTTT+AGG - chr2_4:22334022-22334041 Msa0321200:CDS 20.0%
!!! ATATGGTATGTATTTTTAAG+TGG - chr2_4:22334067-22334086 Msa0321200:CDS 20.0%
!!! TATGGTATGTATTTTTAAGT+GGG - chr2_4:22334068-22334087 Msa0321200:CDS 20.0%
!! TTAACACTAAGTTATAGTTT+GGG + chr2_4:22334129-22334148 None:intergenic 20.0%
!! TTTAACACTAAGTTATAGTT+TGG + chr2_4:22334130-22334149 None:intergenic 20.0%
!!! TAAAGACATTTAAGATTTGT+TGG - chr2_4:22334146-22334165 Msa0321200:CDS 20.0%
!! GTTTGATATATAAAGATAGT+CGG + chr2_4:22334184-22334203 None:intergenic 20.0%
!!! ATAATATCTCATCCAATTTT+GGG + chr2_4:22334228-22334247 None:intergenic 20.0%
!! GATATTATGTATGTTATAAG+TGG - chr2_4:22334240-22334259 Msa0321200:CDS 20.0%
!! TATTATGTATGTTATAAGTG+GGG - chr2_4:22334242-22334261 Msa0321200:CDS 20.0%
!! TTAATTTAACCTTACAACAT+CGG + chr2_4:22334288-22334307 None:intergenic 20.0%
!!! TACGATAGTATTAATTTGAA+GGG + chr2_4:22334355-22334374 None:intergenic 20.0%
!!! TTACGATAGTATTAATTTGA+AGG + chr2_4:22334356-22334375 None:intergenic 20.0%
!! ATTTGACCTTTATACTAAAT+CGG - chr2_4:22334442-22334461 Msa0321200:CDS 20.0%
!!! TTAAAACCGATTTAGTATAA+AGG + chr2_4:22334451-22334470 None:intergenic 20.0%
!!! AATGTTTAGGGTTTAAATTT+TGG + chr2_4:22334881-22334900 None:intergenic 20.0%
!!! TTTCATAAGTTAGTTTAACA+AGG + chr2_4:22334954-22334973 None:intergenic 20.0%
!! ACTAACTTATGAAATATCAA+AGG - chr2_4:22334960-22334979 Msa0321200:intron 20.0%
!! TAAATAACCAAATCATATGA+AGG - chr2_4:22335406-22335425 Msa0321200:intron 20.0%
!! TAAAGCCTATTTACTTAAAT+AGG + chr2_4:22335547-22335566 None:intergenic 20.0%
!!! ACAATTTTATTAAACGAGTT+AGG - chr2_4:22335584-22335603 Msa0321200:intron 20.0%
!! ATAGAATTAATTCACAAGTA+GGG + chr2_4:22335674-22335693 None:intergenic 20.0%
!! AAACAATATATCTATTATGC+GGG + chr2_4:22335745-22335764 None:intergenic 20.0%
!! TAAACTTTAGTTAACACTTA+TGG - chr2_4:22335803-22335822 Msa0321200:intron 20.0%
!!! CAAACATAGTATTTTTAAGT+GGG + chr2_4:22335830-22335849 None:intergenic 20.0%
!!! TCAAACATAGTATTTTTAAG+TGG + chr2_4:22335831-22335850 None:intergenic 20.0%
!!! TGAAATCAACTAAAATTTTG+AGG - chr2_4:22335884-22335903 Msa0321200:intron 20.0%
!! TATCAAAAACAAAATTGGAT+AGG + chr2_4:22336103-22336122 None:intergenic 20.0%
!!! TTTTCATTTTTGATGGAAAT+GGG + chr2_4:22336128-22336147 None:intergenic 20.0%
!!! ATTGGTATTGAAATTGATAT+TGG + chr2_4:22336249-22336268 None:intergenic 20.0%
!! AAATTATTTCAGCTATGATA+TGG - chr2_4:22336282-22336301 Msa0321200:intron 20.0%
!! TCTAATATATTATATTCGTC+CGG + chr2_4:22336449-22336468 None:intergenic 20.0%
!! TTAGATTTAGTGAATCTAAT+TGG - chr2_4:22336464-22336483 Msa0321200:intron 20.0%
!!! AAAGATGATTTTTTGGTTTA+TGG - chr2_4:22336545-22336564 Msa0321200:intron 20.0%
! TTCAGAATCGAAGAAATAAA+TGG + chr2_4:22333657-22333676 None:intergenic 25.0%
!!! AAACATCGGTGTTTTTAAAT+CGG + chr2_4:22333702-22333721 None:intergenic 25.0%
! GTCTCACATTAGATATTATA+TGG - chr2_4:22334050-22334069 Msa0321200:CDS 25.0%
!!! ATGGTATGTATTTTTAAGTG+GGG - chr2_4:22334069-22334088 Msa0321200:CDS 25.0%
! TAACACTAAGTTATAGTTTG+GGG + chr2_4:22334128-22334147 None:intergenic 25.0%
!! CATAATATCTCATCCAATTT+TGG + chr2_4:22334229-22334248 None:intergenic 25.0%
! ATTATGTATGTTATAAGTGG+GGG - chr2_4:22334243-22334262 Msa0321200:CDS 25.0%
! TAATACTATCGTAAGTGAAT+CGG - chr2_4:22334362-22334381 Msa0321200:CDS 25.0%
!!! ATGGGTAAAACTTTTTTACA+TGG - chr2_4:22334505-22334524 Msa0321200:CDS 25.0%
!!! AAAACTTTTTTACATGGAGA+AGG - chr2_4:22334511-22334530 Msa0321200:CDS 25.0%
!! CATTTTGAATTGCATAACTT+GGG - chr2_4:22334553-22334572 Msa0321200:intron 25.0%
!! ATTTTGAATTGCATAACTTG+GGG - chr2_4:22334554-22334573 Msa0321200:intron 25.0%
! GTTCTGCAATTATAATTGTA+TGG - chr2_4:22334634-22334653 Msa0321200:intron 25.0%
! GATAAGGAGTAAAATGTTTA+GGG + chr2_4:22334893-22334912 None:intergenic 25.0%
! AGATAAGGAGTAAAATGTTT+AGG + chr2_4:22334894-22334913 None:intergenic 25.0%
! ATATCAAAGGACATAACATA+AGG - chr2_4:22334973-22334992 Msa0321200:intron 25.0%
! TGGTCTACTTCAAAAATTAT+AGG - chr2_4:22335160-22335179 Msa0321200:intron 25.0%
! TCTATACCTTAGTGTAAAAT+AGG + chr2_4:22335266-22335285 None:intergenic 25.0%
! AAGATTTCGTTATTTAGTAG+CGG + chr2_4:22335353-22335372 None:intergenic 25.0%
! TAAATAACGAAATCTTACGA+AGG - chr2_4:22335357-22335376 Msa0321200:intron 25.0%
!!! CTTTTTTTTAAGTCTTAGTC+TGG - chr2_4:22335521-22335540 Msa0321200:intron 25.0%
! ACTCGTTTAATAAAATTGTC+AGG + chr2_4:22335583-22335602 None:intergenic 25.0%
! TAGAATTAATTCACAAGTAG+GGG + chr2_4:22335673-22335692 None:intergenic 25.0%
! GATAGAATTAATTCACAAGT+AGG + chr2_4:22335675-22335694 None:intergenic 25.0%
! TAAAGTTTAGTTGACATTTC+TGG - chr2_4:22335717-22335736 Msa0321200:intron 25.0%
! AACAATATATCTATTATGCG+GGG + chr2_4:22335744-22335763 None:intergenic 25.0%
! ATTATTATATGATTGATCGG+TGG - chr2_4:22335859-22335878 Msa0321200:intron 25.0%
!!! CTTTTAATTTCATCACCAAA+TGG - chr2_4:22336009-22336028 Msa0321200:intron 25.0%
! GGGATTATCAAAAACAAAAT+TGG + chr2_4:22336108-22336127 None:intergenic 25.0%
!!! GTTTTCATTTTTGATGGAAA+TGG + chr2_4:22336129-22336148 None:intergenic 25.0%
!!! AACAACGTTTTCATTTTTGA+TGG + chr2_4:22336135-22336154 None:intergenic 25.0%
! ATCAAAAATGAAAACGTTGT+TGG - chr2_4:22336134-22336153 Msa0321200:intron 25.0%
! TCAAAAATGAAAACGTTGTT+GGG - chr2_4:22336135-22336154 Msa0321200:intron 25.0%
!!! TATTGGTTGTTTTTACCAAA+TGG + chr2_4:22336232-22336251 None:intergenic 25.0%
! AAATGTATAGCACAAATAAG+AGG - chr2_4:22336305-22336324 Msa0321200:intron 25.0%
! CTAATATATTATATTCGTCC+GGG + chr2_4:22336448-22336467 None:intergenic 25.0%
! AATTAACGAGAATTATGCAT+TGG - chr2_4:22336496-22336515 Msa0321200:intron 25.0%
! GAATTATGCATTGGAAAAAT+TGG - chr2_4:22336505-22336524 Msa0321200:intron 25.0%
!!! TGATGGAAAAGATGATTTTT+TGG - chr2_4:22336538-22336557 Msa0321200:intron 25.0%
! TTATATGGTGTAAAGCTTAA+TGG - chr2_4:22336605-22336624 Msa0321200:CDS 25.0%
! TATATGGTGTAAAGCTTAAT+GGG - chr2_4:22336606-22336625 Msa0321200:CDS 25.0%
! TTTCAAGCTTATATTTCAAC+TGG + chr2_4:22336769-22336788 None:intergenic 25.0%
! AATATAAGCTTGAAAGAGAA+TGG - chr2_4:22336774-22336793 Msa0321200:CDS 25.0%
! ATATAAGCTTGAAAGAGAAT+GGG - chr2_4:22336775-22336794 Msa0321200:CDS 25.0%
! TCAACAAACAAACAAACAAA+AGG + chr2_4:22336884-22336903 None:intergenic 25.0%
GTTGAAATTCTTGAACTTGA+AGG + chr2_4:22333545-22333564 None:intergenic 30.0%
TCAACAAATCCATGTAGTTT+AGG + chr2_4:22333613-22333632 None:intergenic 30.0%
AATCGAAGAAATAAATGGAC+CGG + chr2_4:22333652-22333671 None:intergenic 30.0%
!!! TGGTATGTATTTTTAAGTGG+GGG - chr2_4:22334070-22334089 Msa0321200:CDS 30.0%
! GAGTTTTACAAAATCGAAGA+TGG + chr2_4:22334103-22334122 None:intergenic 30.0%
TATAAAGATAGTCGGATAGA+AGG + chr2_4:22334176-22334195 None:intergenic 30.0%
GCTCTTAACACATATATAAG+TGG + chr2_4:22334206-22334225 None:intergenic 30.0%
TAACATGCATTGTTAGTTAG+TGG - chr2_4:22334389-22334408 Msa0321200:CDS 30.0%
ATTGTTAGTTAGTGGAAAGA+AGG - chr2_4:22334397-22334416 Msa0321200:CDS 30.0%
CCAAGTTATGCAATTCAAAA+TGG + chr2_4:22334555-22334574 None:intergenic 30.0%
! CCATTTTGAATTGCATAACT+TGG - chr2_4:22334552-22334571 Msa0321200:intron 30.0%
ATTGTATGGTTCGTCTAATA+TGG - chr2_4:22334648-22334667 Msa0321200:intron 30.0%
CTAGGAAATTAAAGGAGATA+AGG + chr2_4:22334909-22334928 None:intergenic 30.0%
TTGTTGAGCTAGGAAATTAA+AGG + chr2_4:22334917-22334936 None:intergenic 30.0%
ATATTTCATTCAACTCCTCT+TGG - chr2_4:22335001-22335020 Msa0321200:intron 30.0%
ATCACTAAAGGAAAGACAAA+AGG + chr2_4:22335029-22335048 None:intergenic 30.0%
! AGAATTGCTACTTGTGAATA+AGG - chr2_4:22335093-22335112 Msa0321200:intron 30.0%
! GAATTGCTACTTGTGAATAA+GGG - chr2_4:22335094-22335113 Msa0321200:intron 30.0%
TTAGTGTAAAATAGGCTTTC+AGG + chr2_4:22335258-22335277 None:intergenic 30.0%
! TGAAAGCCTATTTTACACTA+AGG - chr2_4:22335257-22335276 Msa0321200:intron 30.0%
CTATTTAGTAGTAGGCTTAT+AGG + chr2_4:22335293-22335312 None:intergenic 30.0%
CTATAAGCCTACTACTAAAT+AGG - chr2_4:22335291-22335310 Msa0321200:intron 30.0%
TCTGGCCTATTTAAGTAAAT+AGG - chr2_4:22335539-22335558 Msa0321200:intron 30.0%
! AGCCTATTTAAAGCTTAACT+TGG + chr2_4:22335610-22335629 None:intergenic 30.0%
!! AGTTAAGCTTTAAATAGGCT+AGG - chr2_4:22335610-22335629 Msa0321200:intron 30.0%
AGAATTAATTCACAAGTAGG+GGG + chr2_4:22335672-22335691 None:intergenic 30.0%
TTCTATCAGAGCAGAAAATT+TGG - chr2_4:22335688-22335707 Msa0321200:intron 30.0%
TCTATCAGAGCAGAAAATTT+GGG - chr2_4:22335689-22335708 Msa0321200:intron 30.0%
ACAAAATTGGATAGGAATTG+AGG + chr2_4:22336095-22336114 None:intergenic 30.0%
CAAAAATGAAAACGTTGTTG+GGG - chr2_4:22336136-22336155 Msa0321200:intron 30.0%
! TTTTTACCAAATGGTGAAGT+TGG + chr2_4:22336223-22336242 None:intergenic 30.0%
! TTCATTTTCAGCACATTTAG+AGG + chr2_4:22336378-22336397 None:intergenic 30.0%
! CTCAACAATATGTCATTTGT+TGG + chr2_4:22336404-22336423 None:intergenic 30.0%
TTATGCATTGGAAAAATTGG+TGG - chr2_4:22336508-22336527 Msa0321200:intron 30.0%
AAAGTTAACCTTTGTAGACT+TGG - chr2_4:22336571-22336590 Msa0321200:CDS 30.0%
! TTGGAAGAAGCTGATTTATA+TGG - chr2_4:22336590-22336609 Msa0321200:CDS 30.0%
TAATGGGAAGAAACCTATTA+TGG - chr2_4:22336622-22336641 Msa0321200:CDS 30.0%
AAATCACAATTCGCCATAAT+AGG + chr2_4:22336638-22336657 None:intergenic 30.0%
TTATTACCTTCATCATCTTC+TGG + chr2_4:22336704-22336723 None:intergenic 30.0%
GAAGATGATGAAGGTAATAA+TGG - chr2_4:22336704-22336723 Msa0321200:CDS 30.0%
TATAAGCTTGAAAGAGAATG+GGG - chr2_4:22336776-22336795 Msa0321200:CDS 30.0%
CTTATGTTGCTACTATGTAA+GGG - chr2_4:22336910-22336929 Msa0321200:CDS 30.0%
TATTTGCTCACTATCTTGTA+AGG - chr2_4:22336944-22336963 Msa0321200:CDS 30.0%
TAACCAAATATGGTGAGAGA+TGG + chr2_4:22333481-22333500 None:intergenic 35.0%
GAAATTCTTGAACTTGAAGG+AGG + chr2_4:22333542-22333561 None:intergenic 35.0%
TGAACACAACCTAAACTACA+TGG - chr2_4:22333601-22333620 Msa0321200:three_prime_UTR 35.0%
GCATCGTTGCATTTGATAAA+CGG + chr2_4:22333785-22333804 None:intergenic 35.0%
TTTATCAAATGCAACGATGC+AGG - chr2_4:22333785-22333804 Msa0321200:CDS 35.0%
AAAGGAGAAAAAGCAAGATC+AGG + chr2_4:22333911-22333930 None:intergenic 35.0%
!!! TGATCTTGCTTTTTCTCCTT+TGG - chr2_4:22333910-22333929 Msa0321200:CDS 35.0%
!!! TTCTCCTTTGGTTTTTGTCA+AGG - chr2_4:22333922-22333941 Msa0321200:CDS 35.0%
ATGTGTTAAGAGCCCAAAAT+TGG - chr2_4:22334213-22334232 Msa0321200:CDS 35.0%
AGTGGAAAGAAGGTTTACAT+TGG - chr2_4:22334407-22334426 Msa0321200:CDS 35.0%
GTGGAAAGAAGGTTTACATT+GGG - chr2_4:22334408-22334427 Msa0321200:CDS 35.0%
TGGAAAGAAGGTTTACATTG+GGG - chr2_4:22334409-22334428 Msa0321200:CDS 35.0%
TCATTGTGATATGCTGACAA+TGG - chr2_4:22334486-22334505 Msa0321200:CDS 35.0%
CATTGTGATATGCTGACAAT+GGG - chr2_4:22334487-22334506 Msa0321200:CDS 35.0%
ATGACATTGTGATAGCAAGA+GGG + chr2_4:22335056-22335075 None:intergenic 35.0%
AATGACATTGTGATAGCAAG+AGG + chr2_4:22335057-22335076 None:intergenic 35.0%
TTGTGAATAAGGGTGGAAAT+GGG - chr2_4:22335104-22335123 Msa0321200:intron 35.0%
!!! TTTTGAAGTAGACCAAGCTT+AGG + chr2_4:22335155-22335174 None:intergenic 35.0%
AAAAATTATAGGCCTGAGTC+TGG - chr2_4:22335171-22335190 Msa0321200:intron 35.0%
TCTGGTATATTATCCGTCAT+AGG - chr2_4:22335189-22335208 Msa0321200:intron 35.0%
TTTAGTAGTAGGCTTATAGG+TGG + chr2_4:22335290-22335309 None:intergenic 35.0%
AAATAGGCCAAAGCATATGA+AGG - chr2_4:22335307-22335326 Msa0321200:intron 35.0%
ACTCAAGCCTTCATATGATT+TGG + chr2_4:22335416-22335435 None:intergenic 35.0%
CATATGAAGGCTTGAGTTTA+TGG - chr2_4:22335419-22335438 Msa0321200:intron 35.0%
AAAAGCCTATTAAGTCCATG+AGG + chr2_4:22335506-22335525 None:intergenic 35.0%
!! GGCCAAGTTAAGCTTTAAAT+AGG - chr2_4:22335605-22335624 Msa0321200:intron 35.0%
AGTTCACGTGTTTCAAATGT+GGG - chr2_4:22335934-22335953 Msa0321200:intron 35.0%
!! CATGTGAAGAGATTTTGGTA+GGG + chr2_4:22336057-22336076 None:intergenic 35.0%
! TTTGGCATGTGAAGAGATTT+TGG + chr2_4:22336062-22336081 None:intergenic 35.0%
AATTGAGGTTTGGCAAGATT+TGG + chr2_4:22336080-22336099 None:intergenic 35.0%
ATTGGATAGGAATTGAGGTT+TGG + chr2_4:22336090-22336109 None:intergenic 35.0%
AAAACGTTGTTGGGGAATAT+TGG - chr2_4:22336144-22336163 Msa0321200:intron 35.0%
! TGATCTGAAATGTGTGACTA+GGG + chr2_4:22336193-22336212 None:intergenic 35.0%
TTGGAAAAATTGGTGGAGAA+AGG - chr2_4:22336515-22336534 Msa0321200:intron 35.0%
AATTGTGATTTACGTGGTGT+GGG - chr2_4:22336647-22336666 Msa0321200:CDS 35.0%
ATGATAACAGTTTCATTGCC+AGG - chr2_4:22336731-22336750 Msa0321200:CDS 35.0%
TGATAACAGTTTCATTGCCA+GGG - chr2_4:22336732-22336751 Msa0321200:CDS 35.0%
GCTTATGTTGCTACTATGTA+AGG - chr2_4:22336909-22336928 Msa0321200:CDS 35.0%
!! TGAGAGAAGTAGCTTTGGTT+GGG + chr2_4:22333439-22333458 None:intergenic 40.0%
!! ATGAGAGAAGTAGCTTTGGT+TGG + chr2_4:22333440-22333459 None:intergenic 40.0%
CAAGATGAGAGAAGTAGCTT+TGG + chr2_4:22333444-22333463 None:intergenic 40.0%
CAAATATGGTGAGAGATGGA+GGG + chr2_4:22333477-22333496 None:intergenic 40.0%
ATTCTTGAACTTGAAGGAGG+AGG + chr2_4:22333539-22333558 None:intergenic 40.0%
TGATGAAGCTTCACTATGTC+CGG - chr2_4:22333630-22333649 Msa0321200:three_prime_UTR 40.0%
!! TTCGATTCTGAAGCTGTTCA+AGG - chr2_4:22333665-22333684 Msa0321200:CDS 40.0%
AAATCCAGCAGTGGAAACAT+CGG + chr2_4:22333716-22333735 None:intergenic 40.0%
GCATTTGATAAACGGTCTAC+CGG + chr2_4:22333777-22333796 None:intergenic 40.0%
GCATTGTGATAAAACGCTGA+GGG - chr2_4:22333826-22333845 Msa0321200:CDS 40.0%
AGGGAATGGTTGGATGAAAA+TGG - chr2_4:22333845-22333864 Msa0321200:CDS 40.0%
GGGAATGGTTGGATGAAAAT+GGG - chr2_4:22333846-22333865 Msa0321200:CDS 40.0%
CTTGTTCATGATCATGTGCT+TGG - chr2_4:22333884-22333903 Msa0321200:CDS 40.0%
CGTACCTTGACAAAAACCAA+AGG + chr2_4:22333929-22333948 None:intergenic 40.0%
AAAGATAGTCGGATAGAAGG+TGG + chr2_4:22334173-22334192 None:intergenic 40.0%
!! CCTTACAACATCGGTTTGTA+AGG + chr2_4:22334279-22334298 None:intergenic 40.0%
CCTTACAAACCGATGTTGTA+AGG - chr2_4:22334276-22334295 Msa0321200:CDS 40.0%
GAAAGACAAAAGGTTCCAAG+AGG + chr2_4:22335019-22335038 None:intergenic 40.0%
! TTGCTACTTGTGAATAAGGG+TGG - chr2_4:22335097-22335116 Msa0321200:intron 40.0%
CTTGTGAATAAGGGTGGAAA+TGG - chr2_4:22335103-22335122 Msa0321200:intron 40.0%
ACGGATAATATACCAGACTC+AGG + chr2_4:22335186-22335205 None:intergenic 40.0%
ACCTTGAAATGAGCCTATGA+CGG + chr2_4:22335205-22335224 None:intergenic 40.0%
CATAGGCTCATTTCAAGGTA+TGG - chr2_4:22335206-22335225 Msa0321200:intron 40.0%
! GGTATGGTCTGACCTTTTAA+AGG - chr2_4:22335222-22335241 Msa0321200:intron 40.0%
GGCTTCATCAGACCTTTAAA+AGG + chr2_4:22335237-22335256 None:intergenic 40.0%
GCTTTGGCCTATTTAGTAGT+AGG + chr2_4:22335301-22335320 None:intergenic 40.0%
GTTTAGGCCTTCATATGCTT+TGG + chr2_4:22335317-22335336 None:intergenic 40.0%
CTTTAAATAGGCTAGGTCGT+AGG - chr2_4:22335617-22335636 Msa0321200:intron 40.0%
TTAATTCACAAGTAGGGGGT+GGG + chr2_4:22335668-22335687 None:intergenic 40.0%
ATTAATTCACAAGTAGGGGG+TGG + chr2_4:22335669-22335688 None:intergenic 40.0%
CAGTTCACGTGTTTCAAATG+TGG - chr2_4:22335933-22335952 Msa0321200:intron 40.0%
GTTCACGTGTTTCAAATGTG+GGG - chr2_4:22335935-22335954 Msa0321200:intron 40.0%
TTCACGTGTTTCAAATGTGG+GGG - chr2_4:22335936-22335955 Msa0321200:intron 40.0%
ACTCTCTGTAGGACTAAGTT+GGG - chr2_4:22335959-22335978 Msa0321200:intron 40.0%
AGCTAGTATGTGACTCCATT+TGG + chr2_4:22336027-22336046 None:intergenic 40.0%
AAATGGAGTCACATACTAGC+TGG - chr2_4:22336026-22336045 Msa0321200:intron 40.0%
!! GCATGTGAAGAGATTTTGGT+AGG + chr2_4:22336058-22336077 None:intergenic 40.0%
! GTGATCTGAAATGTGTGACT+AGG + chr2_4:22336194-22336213 None:intergenic 40.0%
TTCTAGCCAACTTCACCATT+TGG - chr2_4:22336214-22336233 Msa0321200:intron 40.0%
GCACAAATAAGAGGTGACAT+TGG - chr2_4:22336314-22336333 Msa0321200:intron 40.0%
GTACATATTGTCACAACCCT+AGG + chr2_4:22336341-22336360 None:intergenic 40.0%
AATCGAAACAAATTTGCGCC+CGG - chr2_4:22336427-22336446 Msa0321200:intron 40.0%
AAATTGGTGGAGAAAGGTGA+TGG - chr2_4:22336521-22336540 Msa0321200:intron 40.0%
AGCTTCTTCCAAGTCTACAA+AGG + chr2_4:22336582-22336601 None:intergenic 40.0%
ATGGCGAATTGTGATTTACG+TGG - chr2_4:22336641-22336660 Msa0321200:CDS 40.0%
GAATTGTGATTTACGTGGTG+TGG - chr2_4:22336646-22336665 Msa0321200:CDS 40.0%
!!! GAGTTGTTTTGGTTCTTCCA+GGG - chr2_4:22336678-22336697 Msa0321200:CDS 40.0%
!! AGAGAAGTAGCTTTGGTTGG+GGG + chr2_4:22333437-22333456 None:intergenic 45.0%
!! GAGAGAAGTAGCTTTGGTTG+GGG + chr2_4:22333438-22333457 None:intergenic 45.0%
CCAAATATGGTGAGAGATGG+AGG + chr2_4:22333478-22333497 None:intergenic 45.0%
CCTCCATCTCTCACCATATT+TGG - chr2_4:22333475-22333494 Msa0321200:three_prime_UTR 45.0%
!! GGAGGAGGTGCTTCTAAATT+GGG + chr2_4:22333524-22333543 None:intergenic 45.0%
!! AGGAGGAGGTGCTTCTAAAT+TGG + chr2_4:22333525-22333544 None:intergenic 45.0%
ACACCACGAGGTGAAGAAAA+AGG - chr2_4:22333578-22333597 Msa0321200:three_prime_UTR 45.0%
! TCACCTTTTTCTTCACCTCG+TGG + chr2_4:22333584-22333603 None:intergenic 45.0%
GATTTGTACTCGCATGTTGC+CGG - chr2_4:22333731-22333750 Msa0321200:CDS 45.0%
TTCGGCTATTCTAACTCGAC+CGG + chr2_4:22333753-22333772 None:intergenic 45.0%
CGAGTTAGAATAGCCGAATC+CGG - chr2_4:22333755-22333774 Msa0321200:CDS 45.0%
GATAAACGGTCTACCGGATT+CGG + chr2_4:22333771-22333790 None:intergenic 45.0%
CGCATTGTGATAAAACGCTG+AGG - chr2_4:22333825-22333844 Msa0321200:CDS 45.0%
GTGATAAAACGCTGAGGGAA+TGG - chr2_4:22333831-22333850 Msa0321200:CDS 45.0%
TAAAACGCTGAGGGAATGGT+TGG - chr2_4:22333835-22333854 Msa0321200:CDS 45.0%
GTAGCTCACTTTGTTGAGCT+AGG + chr2_4:22334927-22334946 None:intergenic 45.0%
CAAGAGGGCTTGATCACTAA+AGG + chr2_4:22335041-22335060 None:intergenic 45.0%
! AATAAGGGTGGAAATGGGCT+AGG - chr2_4:22335109-22335128 Msa0321200:intron 45.0%
! GGCTTTATAAGGCCTAAGCT+TGG - chr2_4:22335140-22335159 Msa0321200:intron 45.0%
TCCGTCATAGGCTCATTTCA+AGG - chr2_4:22335201-22335220 Msa0321200:intron 45.0%
AAGGCCTAAACCACACGAAT+AGG - chr2_4:22335326-22335345 Msa0321200:intron 45.0%
AGGCCTAAACCACACGAATA+GGG - chr2_4:22335327-22335346 Msa0321200:intron 45.0%
AGCTTAATAGGTCAGCCTCA+TGG - chr2_4:22335488-22335507 Msa0321200:intron 45.0%
GTCAGCCTCATGGACTTAAT+AGG - chr2_4:22335498-22335517 Msa0321200:intron 45.0%
GACTCTCTGTAGGACTAAGT+TGG - chr2_4:22335958-22335977 Msa0321200:intron 45.0%
! CTAAGTTGGGCTCACATTCT+TGG - chr2_4:22335972-22335991 Msa0321200:intron 45.0%
TAAGAGGTGACATTGGACCT+AGG - chr2_4:22336321-22336340 Msa0321200:intron 45.0%
AAGAGGTGACATTGGACCTA+GGG - chr2_4:22336322-22336341 Msa0321200:intron 45.0%
! GGGTGATCAAGGAGTTGTTT+TGG - chr2_4:22336667-22336686 Msa0321200:CDS 45.0%
!!! GGAGTTGTTTTGGTTCTTCC+AGG - chr2_4:22336677-22336696 Msa0321200:CDS 45.0%
AACTGGTCAAGTTCTTTCCC+TGG + chr2_4:22336752-22336771 None:intergenic 45.0%
!!! TAATTAATTTGTAAAAAAAA+AGG + chr2_4:22334613-22334632 None:intergenic 5.0%
!! TCGTGGTGTTGCTGGAACAA+CGG + chr2_4:22333567-22333586 None:intergenic 50.0%
AACACCGATGTTTCCACTGC+TGG - chr2_4:22333709-22333728 Msa0321200:CDS 50.0%
TGCGAGTACAAATCCAGCAG+TGG + chr2_4:22333725-22333744 None:intergenic 50.0%
AAATGTGGGGGACTCTCTGT+AGG - chr2_4:22335948-22335967 Msa0321200:intron 50.0%
TTACGTGGTGTGGGTGATCA+AGG - chr2_4:22336656-22336675 Msa0321200:CDS 50.0%
GTTGTTCCAGCAACACCACG+AGG - chr2_4:22333566-22333585 Msa0321200:three_prime_UTR 55.0%
!! TCTTCACCTCGTGGTGTTGC+TGG + chr2_4:22333575-22333594 None:intergenic 55.0%
!! AGGGTGGAAATGGGCTAGGT+CGG - chr2_4:22335113-22335132 Msa0321200:intron 55.0%
! AGGTCGGGTCGGGCTTTATA+AGG - chr2_4:22335129-22335148 Msa0321200:intron 55.0%
CGGCCCTATTCGTGTGGTTT+AGG + chr2_4:22335333-22335352 None:intergenic 55.0%
TAGTAGCGGCCCTATTCGTG+TGG + chr2_4:22335339-22335358 None:intergenic 55.0%
CTAGGTCGTAGGCCTCTGTT+GGG - chr2_4:22335628-22335647 Msa0321200:intron 55.0%
CCTTCATCATCTTCTGGCCC+TGG + chr2_4:22336698-22336717 None:intergenic 55.0%
CCAGGGCCAGAAGATGATGA+AGG - chr2_4:22336695-22336714 Msa0321200:CDS 55.0%
!! GGGTGGAAATGGGCTAGGTC+GGG - chr2_4:22335114-22335133 Msa0321200:intron 60.0%
!! GGAAATGGGCTAGGTCGGGT+CGG - chr2_4:22335118-22335137 Msa0321200:intron 60.0%
!! GAAATGGGCTAGGTCGGGTC+GGG - chr2_4:22335119-22335138 Msa0321200:intron 60.0%
GCTAGGTCGTAGGCCTCTGT+TGG - chr2_4:22335627-22335646 Msa0321200:intron 60.0%
TAGGCCTCTGTTGGGCGGTT+TGG - chr2_4:22335636-22335655 Msa0321200:intron 60.0%
CATGCCAAACCGCCCAACAG+AGG + chr2_4:22335643-22335662 None:intergenic 60.0%
CGATGCAGGCGTGCGAATCG+CGG - chr2_4:22333799-22333818 Msa0321200:CDS 65.0%
GGTCGTAGGCCTCTGTTGGG+CGG - chr2_4:22335631-22335650 Msa0321200:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 22333419 22337074 22333419 ID=Msa0321200;Name=Msa0321200
chr2_4 mRNA 22333419 22337074 22333419 ID=Msa0321200-mRNA-1;Parent=Msa0321200;Name=Msa0321200-mRNA-1;_AED=0.00;_eAED=0.00;_QI=90|1|1|1|1|1|2|245|442
chr2_4 exon 22333419 22334557 22333419 ID=Msa0321200-mRNA-1:exon:8230;Parent=Msa0321200-mRNA-1
chr2_4 exon 22336550 22337074 22336550 ID=Msa0321200-mRNA-1:exon:8229;Parent=Msa0321200-mRNA-1
chr2_4 five_prime_UTR 22336985 22337074 22336985 ID=Msa0321200-mRNA-1:five_prime_utr;Parent=Msa0321200-mRNA-1
chr2_4 CDS 22336550 22336984 22336550 ID=Msa0321200-mRNA-1:cds;Parent=Msa0321200-mRNA-1
chr2_4 CDS 22333664 22334557 22333664 ID=Msa0321200-mRNA-1:cds;Parent=Msa0321200-mRNA-1
chr2_4 three_prime_UTR 22333419 22333663 22333419 ID=Msa0321200-mRNA-1:three_prime_utr;Parent=Msa0321200-mRNA-1
Gene Sequence

>Msa0321200

ATGGGTTCACTACCCAATTTAGAAGCACCTCCTCCTTCAAGTTCAAGAATTTCAACCGTTGTTCCAGCAACACCACGAGGTGAAGAAAAAGGTGAACACAACCTAAACTACATGGATTTGTTGATGAAGCTTCACTATGTCCGGTCCATTTATTTCTTCGATTCTGAAGCTGTTCAAGGCCTTACAATATCCGATTTAAAAACACCGATGTTTCCACTGCTGGATTTGTACTCGCATGTTGCCGGTCGAGTTAGAATAGCCGAATCCGGTAGACCGTTTATCAAATGCAACGATGCAGGCGTGCGAATCGCGGAGTCGCATTGTGATAAAACGCTGAGGGAATGGTTGGATGAAAATGGGTATTCAGTTGATGAACTTGTTCATGATCATGTGCTTGGTCCTGATCTTGCTTTTTCTCCTTTGGTTTTTGTCAAGTTCACGTGTTTCAAATGTGGGGGACTCTCTGTAGGACTAAGTTGGGCTCACATTCTTGGAGATGCATTTTCAGCTTTTAATTTCATCACCAAATGGAGTCACATACTAGCTGGTCAATCCCTACCAAAATCTCTTCACATGCCAAATCTTGCCAAACCTCAATTCCTATCCAATTTTGTTTTTGATAATCCCATTTCCATCAAAAATGAAAACGTTGTTGGGGAATATTGGCTTGCTGCAAATGATTGTTATGTCCCTAGTCACACATTTCAGATCACTTCTAGCCAACTTCACCATTTGGTAAAAACAACCAATATCAATTTCAATACCAATACTAAGTATTTTGAAATTATTTCAGCTATGATATGGAAATGTATAGCACAAATAAGAGGTGACATTGGACCTAGGGTTGTGACAATATGTACTAAAAATAAAAATACCTCTAAATGTGCTGAAAATGAATTTCCAACAAATGACATATTGTTGAGCAAAATCGAAACAAATTTGCGCCCGGACGAATATAATATATTAGATTTAGTGAATCTAATTGGTGAGAAAAAAATTAACGAGAATTATGCATTGGAAAAATTGGTGGAGAAAGGTGATGGAAAAGATGATTTTTTGGTTTATGGAGCAAAGTTAACCTTTGTAGACTTGGAAGAAGCTGATTTATATGGTGTAAAGCTTAATGGGAAGAAACCTATTATGGCGAATTGTGATTTACGTGGTGTGGGTGATCAAGGAGTTGTTTTGGTTCTTCCAGGGCCAGAAGATGATGAAGGTAATAATGGAAGAATGATAACAGTTTCATTGCCAGGGAAAGAACTTGACCAGTTGAAATATAAGCTTGAAAGAGAATGGGGTATACAACATTATGCAAGTCTACAATTTTAA

Protein sequence

>Msa0321200

MGSLPNLEAPPPSSSRISTVVPATPRGEEKGEHNLNYMDLLMKLHYVRSIYFFDSEAVQGLTISDLKTPMFPLLDLYSHVAGRVRIAESGRPFIKCNDAGVRIAESHCDKTLREWLDENGYSVDELVHDHVLGPDLAFSPLVFVKFTCFKCGGLSVGLSWAHILGDAFSAFNFITKWSHILAGQSLPKSLHMPNLAKPQFLSNFVFDNPISIKNENVVGEYWLAANDCYVPSHTFQITSSQLHHLVKTTNINFNTNTKYFEIISAMIWKCIAQIRGDIGPRVVTICTKNKNTSKCAENEFPTNDILLSKIETNLRPDEYNILDLVNLIGEKKINENYALEKLVEKGDGKDDFLVYGAKLTFVDLEEADLYGVKLNGKKPIMANCDLRGVGDQGVVLVLPGPEDDEGNNGRMITVSLPGKELDQLKYKLEREWGIQHYASLQF*