AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1308460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308460 MtrunA17_Chr8g0335161 96.375 469 17 0 1 469 1 469 0.0 927
Msa1308460 MtrunA17_Chr8g0335141 84.861 469 70 1 1 469 4 471 0.0 823
Msa1308460 MtrunA17_Chr6g0459311 75.584 471 109 4 1 469 8 474 0.0 724
Msa1308460 MtrunA17_Chr6g0486251 73.876 467 116 4 1 465 1 463 0.0 701
Msa1308460 MtrunA17_Chr6g0486201 73.876 467 116 4 1 465 1 463 0.0 701
Msa1308460 MtrunA17_Chr8g0361371 59.408 473 175 9 3 465 4 469 0.0 539
Msa1308460 MtrunA17_Chr8g0334831 56.818 484 183 10 1 465 1 477 0.0 515
Msa1308460 MtrunA17_Chr7g0232341 46.526 475 240 9 1 468 1 468 1.41e-142 417
Msa1308460 MtrunA17_Chr7g0232391 47.368 475 237 8 1 469 1 468 5.13e-142 415
Msa1308460 MtrunA17_Chr7g0232311 48.608 467 227 9 1 462 1 459 1.52e-141 414
Msa1308460 MtrunA17_Chr7g0232401 47.059 476 233 11 1 466 1 467 3.26e-140 410
Msa1308460 MtrunA17_Chr7g0232411 46.316 475 242 8 1 469 1 468 6.40e-139 407
Msa1308460 MtrunA17_Chr7g0232331 45.148 474 246 9 1 467 1 467 1.19e-136 402
Msa1308460 MtrunA17_Chr8g0336741 46.072 471 242 8 4 469 11 474 2.96e-136 400
Msa1308460 MtrunA17_Chr8g0336731 46.781 466 236 8 9 469 35 493 2.40e-134 397
Msa1308460 MtrunA17_Chr8g0347281 45.788 463 237 10 7 465 19 471 3.17e-132 390
Msa1308460 MtrunA17_Chr1g0153451 44.515 474 250 9 1 469 1 466 5.18e-132 390
Msa1308460 MtrunA17_Chr7g0275511 45.416 469 242 10 7 468 16 477 1.52e-131 389
Msa1308460 MtrunA17_Chr8g0373301 44.842 475 237 12 5 468 8 468 5.81e-130 384
Msa1308460 MtrunA17_Chr8g0336651 47.257 474 238 8 1 469 1 467 8.13e-130 405
Msa1308460 MtrunA17_Chr8g0336651 46.008 476 241 10 3 469 778 1246 2.12e-129 404
Msa1308460 MtrunA17_Chr8g0336651 42.560 336 145 5 137 469 487 777 6.96e-72 247
Msa1308460 MtrunA17_Chr8g0336691 46.849 476 239 9 1 469 8 476 3.50e-129 406
Msa1308460 MtrunA17_Chr8g0336691 44.937 474 247 9 3 469 916 1382 2.93e-121 385
Msa1308460 MtrunA17_Chr8g0336691 42.797 472 232 9 3 469 477 915 2.07e-112 361
Msa1308460 MtrunA17_Chr8g0347271 44.276 463 244 10 7 465 20 472 7.15e-129 382
Msa1308460 MtrunA17_Chr6g0449931 44.979 478 246 11 1 469 1 470 1.39e-125 373
Msa1308460 MtrunA17_Chr8g0339451 44.068 472 247 8 9 469 1 466 6.40e-124 369
Msa1308460 MtrunA17_Chr8g0339461 42.739 482 255 9 1 469 1 474 1.14e-121 363
Msa1308460 MtrunA17_Chr8g0334851 44.259 479 242 12 1 465 1 468 1.99e-121 363
Msa1308460 MtrunA17_Chr8g0334861 42.616 474 251 12 1 465 1 462 3.10e-121 362
Msa1308460 MtrunA17_Chr8g0339631 43.125 480 253 10 1 469 1 471 5.05e-118 354
Msa1308460 MtrunA17_Chr8g0339441 41.545 479 223 9 1 469 1 432 6.85e-111 334
Msa1308460 MtrunA17_Chr8g0339601 50.296 338 155 6 140 469 1 333 2.97e-109 327
Msa1308460 MtrunA17_Chr7g0232351 46.094 384 196 7 1 379 1 378 3.77e-106 320
Msa1308460 MtrunA17_Chr8g0370941 37.398 492 266 13 3 463 5 485 1.95e-94 295
Msa1308460 MtrunA17_Chr5g0403641 34.756 492 260 14 1 468 54 508 1.73e-86 274
Msa1308460 MtrunA17_Chr3g0079731 35.833 480 286 8 1 462 1 476 3.86e-86 272
Msa1308460 MtrunA17_Chr1g0153461 58.411 214 87 2 257 469 3 215 9.81e-83 254
Msa1308460 MtrunA17_Chr6g0462531 35.611 483 265 12 4 463 2 461 1.91e-80 257
Msa1308460 MtrunA17_Chr6g0462521 33.686 472 275 9 4 463 2 447 3.75e-80 256
Msa1308460 MtrunA17_Chr6g0462551 34.864 479 274 11 4 463 2 461 5.69e-79 253
Msa1308460 MtrunA17_Chr6g0462541 33.755 474 279 11 7 463 5 460 4.44e-74 241
Msa1308460 MtrunA17_Chr5g0442541 31.875 480 287 16 3 462 2 461 7.64e-72 234
Msa1308460 MtrunA17_Chr5g0442581 33.131 495 272 16 3 462 2 472 4.18e-71 234
Msa1308460 MtrunA17_Chr5g0448521 31.733 479 291 15 3 462 2 463 1.42e-70 231
Msa1308460 MtrunA17_Chr5g0442491 32.640 481 291 12 3 462 2 470 1.78e-70 231
Msa1308460 MtrunA17_Chr6g0462571 31.224 474 295 10 4 463 2 458 1.87e-70 231
Msa1308460 MtrunA17_Chr5g0429681 33.262 469 267 16 1 447 39 483 1.57e-69 229
Msa1308460 MtrunA17_Chr5g0442561 31.911 492 290 16 3 468 2 474 6.66e-69 227
Msa1308460 MtrunA17_Chr2g0302991 32.298 483 278 16 7 466 6 462 1.51e-66 221
Msa1308460 MtrunA17_Chr2g0302961 31.211 487 287 14 4 466 3 465 1.13e-65 218
Msa1308460 MtrunA17_Chr5g0442521 31.263 483 296 14 3 462 2 471 1.90e-65 218
Msa1308460 MtrunA17_Chr5g0429711 31.893 486 273 18 1 462 6 457 3.19e-65 217
Msa1308460 MtrunA17_Chr5g0442601 30.864 486 295 14 3 462 401 871 9.59e-63 218
Msa1308460 MtrunA17_Chr5g0442601 31.714 350 199 8 61 402 16 333 2.49e-41 157
Msa1308460 MtrunA17_Chr4g0044511 32.582 488 279 16 2 462 36 500 3.24e-59 202
Msa1308460 MtrunA17_Chr8g0366391 30.285 492 295 12 6 469 9 480 1.37e-57 197
Msa1308460 MtrunA17_Chr5g0442511 29.350 477 287 13 3 462 46 489 2.56e-57 197
Msa1308460 MtrunA17_Chr5g0426431 33.200 500 255 22 5 462 11 473 1.14e-56 195
Msa1308460 MtrunA17_Chr3g0092641 31.463 499 263 21 6 462 12 473 2.04e-53 186
Msa1308460 MtrunA17_Chr5g0420801 31.148 488 283 16 2 467 3 459 8.10e-53 184
Msa1308460 MtrunA17_Chr7g0265041 32.238 487 273 16 6 455 11 477 7.26e-52 182
Msa1308460 MtrunA17_Chr8g0369341 32.365 482 285 16 2 462 3 464 8.39e-52 182
Msa1308460 MtrunA17_Chr4g0053501 29.598 473 300 14 7 466 12 464 2.83e-51 181
Msa1308460 MtrunA17_Chr3g0112771 30.608 477 280 16 1 462 7 447 4.74e-51 179
Msa1308460 MtrunA17_Chr7g0265051 29.532 491 293 14 4 460 7 478 8.81e-51 180
Msa1308460 MtrunA17_Chr7g0265141 29.184 490 287 15 4 455 7 474 1.23e-50 179
Msa1308460 MtrunA17_Chr3g0078841 29.839 496 271 20 2 455 6 466 2.11e-50 178
Msa1308460 MtrunA17_Chr4g0066221 28.398 493 300 15 1 462 6 476 6.55e-50 177
Msa1308460 MtrunA17_Chr7g0265151 28.600 493 268 19 12 456 17 473 7.05e-50 177
Msa1308460 MtrunA17_Chr4g0066151 37.050 278 141 10 210 462 207 475 8.06e-50 177
Msa1308460 MtrunA17_Chr4g0044501 32.536 418 233 13 70 466 86 475 2.06e-49 176
Msa1308460 MtrunA17_Chr7g0275681 30.738 488 280 16 1 455 7 469 3.80e-49 175
Msa1308460 MtrunA17_Chr7g0265101 29.352 494 292 15 4 460 7 480 5.11e-49 175
Msa1308460 MtrunA17_Chr4g0044521 35.691 311 166 9 177 462 161 462 5.31e-49 174
Msa1308460 MtrunA17_Chr7g0243871 37.809 283 151 7 191 459 194 465 6.06e-49 174
Msa1308460 MtrunA17_Chr4g0066281 38.376 271 141 8 211 462 199 462 6.15e-49 174
Msa1308460 MtrunA17_Chr4g0042891 32.225 481 262 21 6 460 7 449 1.82e-48 173
Msa1308460 MtrunA17_Chr3g0079711 48.663 187 83 3 284 462 3 184 6.83e-48 163
Msa1308460 MtrunA17_Chr8g0377921 28.803 493 276 15 7 462 5 459 8.95e-48 171
Msa1308460 MtrunA17_Chr5g0426401 36.196 326 162 15 161 468 12 309 1.30e-47 166
Msa1308460 MtrunA17_Chr6g0454401 28.800 500 288 17 2 462 6 476 1.34e-47 171
Msa1308460 MtrunA17_Chr2g0278711 30.894 492 281 20 3 462 8 472 1.61e-47 170
Msa1308460 MtrunA17_Chr8g0374901 30.533 488 281 20 7 462 13 474 1.82e-47 170
Msa1308460 MtrunA17_Chr5g0440421 29.388 490 293 14 3 456 7 479 2.03e-47 171
Msa1308460 MtrunA17_Chr4g0042931 30.882 476 299 13 6 468 7 465 2.78e-47 169
Msa1308460 MtrunA17_Chr7g0243771 29.779 497 288 18 1 462 1 471 2.92e-47 170
Msa1308460 MtrunA17_Chr6g0454341 28.715 498 288 19 2 462 6 473 3.01e-47 170
Msa1308460 MtrunA17_Chr5g0414331 27.629 485 295 13 2 468 9 455 3.39e-47 169
Msa1308460 MtrunA17_Chr6g0463861 34.364 291 161 9 197 462 184 469 4.15e-47 169
Msa1308460 MtrunA17_Chr4g0014061 35.000 280 149 5 211 468 206 474 5.59e-47 169
Msa1308460 MtrunA17_Chr7g0243781 38.060 268 139 7 211 462 215 471 6.08e-47 169
Msa1308460 MtrunA17_Chr8g0374971 35.395 291 158 8 197 462 191 476 1.27e-46 168
Msa1308460 MtrunA17_Chr2g0329111 29.106 481 262 17 1 440 1 443 1.53e-46 168
Msa1308460 MtrunA17_Chr7g0217881 32.239 335 189 10 147 462 142 457 2.08e-46 167
Msa1308460 MtrunA17_Chr6g0464881 27.066 484 284 15 2 459 7 447 2.30e-46 167
Msa1308460 MtrunA17_Chr1g0179901 30.321 498 268 23 6 455 16 482 2.33e-46 167
Msa1308460 MtrunA17_Chr5g0414321 27.066 484 299 12 2 468 7 453 4.78e-46 166
Msa1308460 MtrunA17_Chr4g0032331 30.126 478 277 16 4 462 6 445 4.86e-46 166
Msa1308460 MtrunA17_Chr3g0118671 27.510 498 296 17 1 462 1 469 1.05e-45 166
Msa1308460 MtrunA17_Chr8g0359821 28.600 493 293 15 3 462 7 473 1.21e-45 165
Msa1308460 MtrunA17_Chr6g0464921 33.835 266 148 5 205 459 200 448 1.50e-45 164
Msa1308460 MtrunA17_Chr6g0454261 31.565 377 214 14 106 462 123 475 1.60e-45 165
Msa1308460 MtrunA17_Chr8g0367221 29.476 458 285 11 3 443 1285 1721 1.71e-45 170
Msa1308460 MtrunA17_Chr8g0367221 28.821 458 288 13 3 443 795 1231 8.89e-43 162
Msa1308460 MtrunA17_Chr8g0367221 28.166 458 290 11 3 443 9 444 9.87e-40 153
Msa1308460 MtrunA17_Chr4g0053321 36.704 267 146 10 199 455 215 468 2.45e-45 165
Msa1308460 MtrunA17_Chr7g0218811 31.429 420 228 15 62 462 67 445 2.67e-45 164
Msa1308460 MtrunA17_Chr6g0453951 32.323 297 170 10 171 455 238 515 3.60e-45 165
Msa1308460 MtrunA17_Chr7g0249961 36.800 250 128 6 231 468 30 261 3.88e-45 158
Msa1308460 MtrunA17_Chr7g0243801 29.532 491 285 18 7 462 8 472 4.30e-45 164
Msa1308460 MtrunA17_Chr7g0249981 27.992 493 280 17 4 468 23 468 4.49e-45 164
Msa1308460 MtrunA17_Chr6g0464871 28.980 490 288 18 3 469 17 469 6.88e-45 163
Msa1308460 MtrunA17_Chr4g0050341 28.150 508 286 18 4 466 17 490 8.52e-45 163
Msa1308460 MtrunA17_Chr6g0464841 29.508 488 280 20 4 466 6 454 9.78e-45 162
Msa1308460 MtrunA17_Chr6g0454151 35.738 305 161 13 171 462 191 473 1.38e-44 162
Msa1308460 MtrunA17_Chr2g0278721 29.130 460 286 14 2 441 513 952 3.26e-44 166
Msa1308460 MtrunA17_Chr2g0278721 28.009 457 286 13 2 441 11 441 6.53e-38 147
Msa1308460 MtrunA17_Chr6g0449991 34.503 342 190 12 1 333 1 317 4.28e-44 157
Msa1308460 MtrunA17_Chr1g0173121 34.528 307 183 8 164 462 162 458 4.36e-44 160
Msa1308460 MtrunA17_Chr6g0454271 33.559 295 156 9 178 455 4 275 4.89e-44 156
Msa1308460 MtrunA17_Chr6g0454201 33.557 298 165 10 171 455 192 469 5.46e-44 161
Msa1308460 MtrunA17_Chr3g0112761 28.243 478 296 14 3 466 5 449 9.74e-44 160
Msa1308460 MtrunA17_Chr6g0463851 32.248 307 181 9 185 469 184 485 1.22e-43 160
Msa1308460 MtrunA17_Chr6g0454121 33.882 304 170 9 171 462 190 474 1.63e-43 159
Msa1308460 MtrunA17_Chr8g0337381 58.015 131 52 2 339 469 1 128 1.67e-43 149
Msa1308460 MtrunA17_Chr4g0066201 32.353 306 179 9 178 462 172 470 1.89e-43 159
Msa1308460 MtrunA17_Chr7g0243681 28.398 493 289 17 6 462 11 475 2.42e-43 159
Msa1308460 MtrunA17_Chr6g0454141 31.830 377 213 15 106 462 123 475 3.30e-43 159
Msa1308460 MtrunA17_Chr4g0066131 33.942 274 155 8 210 462 202 470 3.43e-43 159
Msa1308460 MtrunA17_Chr4g0060511 36.364 275 141 6 211 462 220 483 3.74e-43 159
Msa1308460 MtrunA17_Chr6g0454301 27.364 497 296 18 2 462 259 726 4.04e-43 162
Msa1308460 MtrunA17_Chr6g0454301 34.335 233 125 7 234 455 3 218 2.84e-34 136
Msa1308460 MtrunA17_Chr6g0454211 31.250 368 213 11 106 455 410 755 4.05e-43 162
Msa1308460 MtrunA17_Chr6g0454211 30.603 232 102 11 160 379 52 236 3.53e-21 97.1
Msa1308460 MtrunA17_Chr6g0454191 28.600 493 284 18 2 455 6 469 5.45e-43 158
Msa1308460 MtrunA17_Chr1g0207981 33.657 309 178 9 162 459 173 465 6.91e-43 158
Msa1308460 MtrunA17_Chr4g0066261 33.225 307 178 10 178 462 176 477 7.00e-43 158
Msa1308460 MtrunA17_Chr3g0118691 27.143 490 308 14 1 462 10 478 8.93e-43 157
Msa1308460 MtrunA17_Chr4g0066171 32.680 306 178 10 178 462 174 472 1.08e-42 157
Msa1308460 MtrunA17_Chr7g0218311 35.662 272 151 7 210 462 213 479 1.17e-42 157
Msa1308460 MtrunA17_Chr8g0374941 36.101 277 143 10 211 462 1146 1413 1.24e-42 162
Msa1308460 MtrunA17_Chr8g0374941 35.338 266 138 11 211 451 208 464 1.12e-39 153
Msa1308460 MtrunA17_Chr8g0374941 35.907 259 140 8 211 448 673 926 1.81e-39 152
Msa1308460 MtrunA17_Chr4g0011051 29.249 506 276 19 1 456 4 477 1.27e-42 157
Msa1308460 MtrunA17_Chr6g0454131 34.539 304 168 11 171 462 190 474 2.01e-42 157
Msa1308460 MtrunA17_Chr8g0377941 28.151 476 290 15 7 459 8 454 2.13e-42 156
Msa1308460 MtrunA17_Chr8g0336331 28.056 499 289 19 2 462 6 472 2.19e-42 156
Msa1308460 MtrunA17_Chr2g0294941 31.006 358 211 13 121 457 28 370 2.32e-42 154
Msa1308460 MtrunA17_Chr3g0118701 27.551 490 306 15 1 462 10 478 2.53e-42 156
Msa1308460 MtrunA17_Chr1g0159551 32.990 291 181 6 179 462 172 455 2.89e-42 155
Msa1308460 MtrunA17_Chr5g0431441 29.046 482 279 16 6 462 18 461 3.54e-42 155
Msa1308460 MtrunA17_Chr8g0350881 36.264 273 148 8 211 462 209 476 3.61e-42 156
Msa1308460 MtrunA17_Chr7g0243931 27.976 504 290 14 2 462 13 486 3.78e-42 156
Msa1308460 MtrunA17_Chr3g0121991 28.764 518 289 25 5 461 42 540 4.01e-42 157
Msa1308460 MtrunA17_Chr7g0243631 29.376 497 272 20 11 462 20 482 4.06e-42 156
Msa1308460 MtrunA17_Chr8g0361411 28.660 485 289 19 4 467 6 454 4.11e-42 155
Msa1308460 MtrunA17_Chr5g0419761 32.703 370 197 14 123 462 134 481 4.25e-42 156
Msa1308460 MtrunA17_Chr5g0412111 30.939 362 217 11 114 462 116 457 6.88e-42 155
Msa1308460 MtrunA17_Chr6g0482061 27.813 471 293 17 5 446 10 462 9.00e-42 155
Msa1308460 MtrunA17_Chr7g0218831 28.918 453 266 17 6 442 6 418 9.97e-42 154
Msa1308460 MtrunA17_Chr6g0454321 29.915 351 200 14 122 449 133 460 1.35e-41 157
Msa1308460 MtrunA17_Chr7g0218821 30.000 380 217 13 92 459 101 443 2.24e-41 153
Msa1308460 MtrunA17_Chr7g0243951 26.453 499 303 12 2 462 7 479 2.30e-41 154
Msa1308460 MtrunA17_Chr7g0218791 28.184 479 260 18 10 455 9 436 4.04e-41 152
Msa1308460 MtrunA17_Chr6g0454291 33.333 297 167 10 171 455 188 465 4.47e-41 153
Msa1308460 MtrunA17_Chr5g0431361 27.869 488 279 19 2 462 8 449 4.53e-41 152
Msa1308460 MtrunA17_Chr6g0454331 32.323 297 171 7 178 462 196 474 5.54e-41 152
Msa1308460 MtrunA17_Chr5g0419771 34.962 266 143 7 211 455 245 501 6.76e-41 153
Msa1308460 MtrunA17_Chr5g0423981 32.566 304 174 10 171 462 156 440 7.42e-41 152
Msa1308460 MtrunA17_Chr3g0118771 26.347 501 310 17 2 468 17 492 7.48e-41 152
Msa1308460 MtrunA17_Chr6g0453961 31.212 330 184 10 145 462 187 485 9.52e-41 152
Msa1308460 MtrunA17_Chr4g0044481 36.404 228 124 4 211 429 209 424 1.07e-40 150
Msa1308460 MtrunA17_Chr6g0464861 35.055 271 143 8 209 466 203 453 1.09e-40 151
Msa1308460 MtrunA17_Chr5g0401721 29.912 341 201 12 136 462 150 466 1.25e-40 151
Msa1308460 MtrunA17_Chr2g0294931 35.662 272 150 8 211 462 211 477 1.64e-40 151
Msa1308460 MtrunA17_Chr7g0235051 35.793 271 141 6 211 459 187 446 1.81e-40 151
Msa1308460 MtrunA17_Chr1g0207861 34.875 281 158 7 200 468 203 470 3.00e-40 150
Msa1308460 MtrunA17_Chr2g0278741 28.884 457 282 14 2 441 93 523 3.19e-40 152
Msa1308460 MtrunA17_Chr3g0118721 32.333 300 166 10 180 462 6 285 4.13e-40 145
Msa1308460 MtrunA17_Chr8g0365811 30.334 389 228 15 94 462 588 953 4.27e-40 154
Msa1308460 MtrunA17_Chr8g0365811 31.949 313 188 9 130 431 142 440 3.31e-38 148
Msa1308460 MtrunA17_Chr5g0428081 27.027 481 309 14 7 462 12 475 4.53e-40 150
Msa1308460 MtrunA17_Chr3g0118661 29.614 466 252 19 2 426 9 439 4.81e-40 150
Msa1308460 MtrunA17_Chr2g0294921 35.145 276 154 8 211 466 360 630 4.92e-40 152
Msa1308460 MtrunA17_Chr8g0382021 31.551 374 221 10 99 462 136 484 4.93e-40 150
Msa1308460 MtrunA17_Chr8g0355221 39.474 228 122 4 250 469 270 489 6.70e-40 150
Msa1308460 MtrunA17_Chr3g0122001 31.217 378 217 15 111 462 109 469 6.98e-40 153
Msa1308460 MtrunA17_Chr3g0122001 31.746 378 214 16 111 462 589 948 3.06e-39 151
Msa1308460 MtrunA17_Chr8g0334841 49.315 146 70 3 171 314 1 144 7.52e-40 141
Msa1308460 MtrunA17_Chr4g0069611 29.890 455 273 15 3 441 12 436 7.65e-40 149
Msa1308460 MtrunA17_Chr1g0161351 30.867 392 239 12 83 462 122 493 7.81e-40 150
Msa1308460 MtrunA17_Chr7g0249931 39.409 203 104 5 258 459 292 476 8.73e-40 149
Msa1308460 MtrunA17_Chr5g0412101 29.275 386 226 12 99 462 106 466 9.96e-40 149
Msa1308460 MtrunA17_Chr3g0118711 27.621 496 294 18 3 462 10 476 1.08e-39 149
Msa1308460 MtrunA17_Chr1g0207951 34.363 259 141 7 214 462 865 1104 1.27e-39 152
Msa1308460 MtrunA17_Chr1g0207951 31.481 270 153 6 204 462 318 566 1.65e-37 146
Msa1308460 MtrunA17_Chr6g0454181 31.313 297 173 10 171 455 191 468 1.34e-39 149
Msa1308460 MtrunA17_Chr1g0207931 29.863 365 199 12 136 462 148 493 3.43e-39 148
Msa1308460 MtrunA17_Chr8g0380531 27.443 481 296 15 6 466 10 457 4.04e-39 147
Msa1308460 MtrunA17_Chr7g0218841 28.139 462 259 19 6 442 6 419 4.09e-39 147
Msa1308460 MtrunA17_Chr3g0098111 32.616 279 167 6 200 468 204 471 4.29e-39 147
Msa1308460 MtrunA17_Chr7g0250001 27.291 491 294 19 1 469 1 450 1.19e-38 145
Msa1308460 MtrunA17_Chr4g0072761 34.752 282 161 7 182 462 189 448 1.25e-38 145
Msa1308460 MtrunA17_Chr1g0207971 29.213 356 209 13 122 462 122 449 1.39e-38 145
Msa1308460 MtrunA17_Chr4g0029131 28.000 450 287 12 1 440 7 429 1.45e-38 148
Msa1308460 MtrunA17_Chr7g0243711 39.631 217 109 4 257 462 107 312 2.56e-38 142
Msa1308460 MtrunA17_Chr6g0452771 32.237 304 175 8 171 462 191 475 2.89e-38 145
Msa1308460 MtrunA17_Chr5g0412131 26.667 480 303 15 6 462 12 465 4.54e-38 144
Msa1308460 MtrunA17_Chr7g0243851 35.379 277 141 8 211 462 175 438 4.60e-38 144
Msa1308460 MtrunA17_Chr6g0454361 31.250 304 178 9 171 462 192 476 7.19e-38 144
Msa1308460 MtrunA17_Chr1g0165701 37.826 230 121 4 250 469 269 486 9.31e-38 144
Msa1308460 MtrunA17_Chr7g0243861 36.232 276 140 7 211 462 220 483 1.06e-37 144
Msa1308460 MtrunA17_Chr8g0374931 34.340 265 149 8 211 455 211 470 1.26e-37 143
Msa1308460 MtrunA17_Chr6g0454221 34.188 234 125 7 234 455 3 219 2.80e-37 138
Msa1308460 MtrunA17_Chr4g0072771 32.632 285 171 5 178 462 198 461 8.07e-37 141
Msa1308460 MtrunA17_Chr7g0243811 40.102 197 102 4 211 402 190 375 1.49e-36 139
Msa1308460 MtrunA17_Chr5g0401851 38.182 220 119 4 257 468 275 485 1.71e-36 140
Msa1308460 MtrunA17_Chr3g0106251 30.769 286 165 8 179 455 21 282 2.10e-36 136
Msa1308460 MtrunA17_Chr7g0241781 27.033 455 262 14 3 442 6 405 4.78e-36 138
Msa1308460 MtrunA17_Chr5g0416741 26.680 491 308 13 7 466 14 483 7.55e-36 139
Msa1308460 MtrunA17_Chr5g0410941 31.183 279 167 7 211 469 219 492 8.11e-36 139
Msa1308460 MtrunA17_Chr5g0409591 34.559 272 149 7 211 462 212 474 9.31e-36 138
Msa1308460 MtrunA17_Chr7g0243761 27.126 494 269 18 6 445 11 467 9.81e-36 138
Msa1308460 MtrunA17_Chr5g0432731 31.317 281 165 6 191 462 31 292 1.01e-35 134
Msa1308460 MtrunA17_Chr7g0243911 41.000 200 94 5 258 446 22 208 2.43e-35 131
Msa1308460 MtrunA17_Chr3g0106231 25.949 474 278 15 5 455 17 440 2.63e-35 137
Msa1308460 MtrunA17_Chr5g0431401 25.988 481 286 18 6 462 10 444 2.72e-35 136
Msa1308460 MtrunA17_Chr5g0393591 33.200 250 126 8 213 462 223 431 7.13e-35 135
Msa1308460 MtrunA17_Chr4g0029151 25.785 446 302 9 1 440 15 437 8.28e-35 135
Msa1308460 MtrunA17_Chr6g0466831 27.837 467 285 15 3 451 15 447 9.21e-35 135
Msa1308460 MtrunA17_Chr7g0265111 36.866 217 114 5 258 462 306 511 1.23e-34 135
Msa1308460 MtrunA17_Chr7g0241801 27.033 455 262 14 3 442 6 405 1.64e-34 134
Msa1308460 MtrunA17_Chr3g0118751 25.686 510 275 17 1 468 1 448 1.88e-34 134
Msa1308460 MtrunA17_Chr1g0207831 31.071 280 158 7 197 462 201 459 5.87e-34 133
Msa1308460 MtrunA17_Chr7g0243611 37.273 220 111 6 196 402 66 271 7.11e-34 129
Msa1308460 MtrunA17_Chr2g0307961 29.737 380 210 11 111 466 122 468 1.18e-33 132
Msa1308460 MtrunA17_Chr6g0454171 30.435 276 145 9 201 462 63 305 1.78e-33 128
Msa1308460 MtrunA17_Chr6g0454351 29.022 317 174 11 161 462 180 460 2.11e-33 131
Msa1308460 MtrunA17_Chr6g0464091 27.015 459 292 14 2 442 14 447 2.59e-33 131
Msa1308460 MtrunA17_Chr5g0431421 25.786 477 292 18 6 462 10 444 3.36e-33 130
Msa1308460 MtrunA17_Chr8g0355011 30.029 343 180 11 106 441 47 336 6.80e-33 128
Msa1308460 MtrunA17_Chr8g0336321 26.998 463 280 13 6 440 7 439 8.17e-33 129
Msa1308460 MtrunA17_Chr6g0463891 36.123 227 120 5 244 459 265 477 1.91e-32 129
Msa1308460 MtrunA17_Chr6g0466841 26.767 467 290 15 3 451 15 447 3.27e-32 128
Msa1308460 MtrunA17_Chr5g0442501 28.435 313 206 8 3 306 2 305 7.31e-32 124
Msa1308460 MtrunA17_Chr8g0336251 26.840 462 282 13 6 440 7 439 1.09e-31 126
Msa1308460 MtrunA17_Chr5g0431371 25.314 478 293 17 6 462 10 444 2.58e-31 125
Msa1308460 MtrunA17_Chr5g0427571 34.000 250 137 6 213 449 46 280 2.63e-31 122
Msa1308460 MtrunA17_Chr4g0039881 34.025 241 139 5 207 441 187 413 2.73e-31 125
Msa1308460 MtrunA17_Chr4g0040691 25.959 443 296 13 6 439 8 427 3.71e-31 125
Msa1308460 MtrunA17_Chr1g0196851 26.180 466 276 11 2 440 45 469 6.18e-31 125
Msa1308460 MtrunA17_Chr2g0302851 24.896 482 266 15 2 442 12 438 2.68e-30 122
Msa1308460 MtrunA17_Chr3g0092031 36.813 182 101 3 260 441 6 173 4.30e-30 116
Msa1308460 MtrunA17_Chr5g0448551 24.831 443 287 15 3 426 4 419 5.18e-29 119
Msa1308460 MtrunA17_Chr6g0454251 33.023 215 119 6 178 380 194 395 6.24e-29 117
Msa1308460 MtrunA17_Chr6g0454371 32.778 180 104 4 283 462 4 166 1.02e-28 111
Msa1308460 MtrunA17_Chr4g0066141 38.462 156 85 3 318 462 192 347 1.20e-28 116
Msa1308460 MtrunA17_Chr5g0416821 32.374 278 141 8 211 466 221 473 3.23e-28 117
Msa1308460 MtrunA17_Chr2g0283041 30.493 223 143 3 210 432 210 420 1.95e-27 114
Msa1308460 MtrunA17_Chr4g0040711 24.661 442 303 11 6 439 8 427 2.97e-27 114
Msa1308460 MtrunA17_Chr3g0079721 28.966 290 187 7 4 278 3 288 4.16e-27 110
Msa1308460 MtrunA17_Chr8g0357361 39.726 146 75 2 257 402 117 249 5.37e-27 109
Msa1308460 MtrunA17_Chr4g0029161 26.222 450 267 14 1 440 7 401 6.41e-26 109
Msa1308460 MtrunA17_Chr5g0431431 30.651 261 139 7 171 422 116 343 2.42e-25 107
Msa1308460 MtrunA17_Chr7g0231631 30.909 275 143 7 209 462 7 255 4.33e-24 101
Msa1308460 MtrunA17_Chr8g0336261 34.000 150 82 4 280 429 1 133 5.24e-24 97.4
Msa1308460 MtrunA17_Chr6g0454231 25.490 255 129 6 209 455 5 206 7.28e-22 98.2
Msa1308460 MtrunA17_Chr2g0319801 24.834 451 299 13 6 443 8 431 1.18e-21 97.4
Msa1308460 MtrunA17_Chr2g0319761 24.215 446 308 11 6 441 8 433 4.75e-21 95.5
Msa1308460 MtrunA17_Chr1g0207881 35.762 151 87 4 315 462 237 380 6.06e-21 94.7
Msa1308460 MtrunA17_Chr5g0442551 26.246 301 183 11 61 349 21 294 7.89e-21 92.8
Msa1308460 MtrunA17_Chr2g0319791 24.554 448 296 16 6 439 8 427 4.50e-20 92.4
Msa1308460 MtrunA17_Chr2g0319731 23.608 449 307 13 6 443 25 448 2.53e-19 90.5
Msa1308460 MtrunA17_Chr2g0319751 24.719 445 299 14 6 439 485 904 6.62e-19 90.1
Msa1308460 MtrunA17_Chr2g0319751 36.752 117 71 2 324 439 289 403 1.74e-15 79.3
Msa1308460 MtrunA17_Chr2g0321331 32.961 179 91 4 265 443 91 240 2.43e-18 85.1
Msa1308460 MtrunA17_Chr7g0243731 47.887 71 37 0 333 403 2 72 2.98e-18 79.3
Msa1308460 MtrunA17_Chr6g0449971 51.948 77 36 1 389 465 1 76 4.95e-17 75.9
Msa1308460 MtrunA17_Chr6g0469961 34.507 142 78 5 170 300 27 164 1.00e-15 74.7
Msa1308460 MtrunA17_Chr6g0453941 27.950 161 102 6 171 319 113 271 4.82e-15 75.5
Msa1308460 MtrunA17_Chr6g0453981 31.507 146 86 6 171 304 61 204 1.83e-13 69.7
Msa1308460 MtrunA17_Chr6g0454391 43.284 67 33 2 356 422 13 74 1.09e-12 64.7
Msa1308460 MtrunA17_Chr6g0454111 33.333 135 77 4 178 300 50 183 5.02e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308460 AT1G01420.1 46.581 468 232 13 6 465 8 465 1.58e-132 392
Msa1308460 AT4G01070.1 45.032 473 241 11 2 465 4 466 1.72e-132 392
Msa1308460 AT1G01420.2 46.581 468 232 13 6 465 11 468 1.98e-132 392
Msa1308460 AT1G01390.2 46.497 471 229 14 6 465 25 483 1.00e-124 372
Msa1308460 AT1G01390.1 46.497 471 229 14 6 465 8 466 1.07e-124 372
Msa1308460 AT5G26310.1 36.250 480 278 11 4 469 5 470 2.02e-97 301
Msa1308460 AT3G50740.1 36.326 479 273 11 4 463 5 470 6.19e-93 290
Msa1308460 AT5G66690.1 36.069 463 272 9 4 455 5 454 3.94e-91 285
Msa1308460 AT2G18570.1 35.430 477 273 15 9 467 8 467 6.81e-82 261
Msa1308460 AT4G36770.1 35.808 458 259 13 8 448 6 445 1.15e-81 260
Msa1308460 AT3G16520.3 35.118 467 275 11 7 462 6 455 3.55e-81 259
Msa1308460 AT1G07260.1 34.402 468 264 14 11 455 13 460 3.03e-77 249
Msa1308460 AT3G16520.1 34.649 456 270 11 7 451 6 444 3.66e-77 248
Msa1308460 AT3G16520.2 34.649 456 270 11 7 451 6 444 4.50e-77 248
Msa1308460 AT4G01070.2 42.090 354 185 11 2 346 4 346 9.37e-77 244
Msa1308460 AT1G07250.1 31.762 488 295 12 1 466 1 472 9.55e-76 245
Msa1308460 AT2G18560.1 38.058 381 213 10 95 465 8 375 2.71e-72 233
Msa1308460 AT3G21790.1 32.025 484 293 13 4 462 2 474 1.43e-70 232
Msa1308460 AT2G29750.1 32.770 473 275 17 7 455 9 462 9.73e-70 230
Msa1308460 AT3G21750.1 32.000 475 289 9 4 459 2 461 6.09e-69 228
Msa1308460 AT3G21780.1 32.780 482 276 14 4 459 2 461 4.93e-68 225
Msa1308460 AT4G15280.1 30.498 482 298 13 4 462 2 469 7.48e-67 222
Msa1308460 AT4G15280.2 30.498 482 298 13 4 462 34 501 1.64e-66 222
Msa1308460 AT2G29730.1 29.079 478 300 14 3 462 2 458 5.90e-66 219
Msa1308460 AT2G29740.1 31.303 476 289 13 2 455 4 463 1.24e-65 219
Msa1308460 AT3G21800.1 31.535 482 293 13 1 459 1 468 1.37e-65 219
Msa1308460 AT1G07240.1 31.120 482 290 11 3 458 2 467 3.35e-65 218
Msa1308460 AT2G29710.1 29.684 475 295 14 3 459 2 455 5.61e-63 211
Msa1308460 AT4G15260.1 32.682 358 223 7 115 462 1 350 1.31e-61 205
Msa1308460 AT3G21760.1 31.417 487 288 14 4 459 2 473 9.46e-61 206
Msa1308460 AT4G34131.1 29.116 498 288 11 2 462 6 475 1.13e-56 195
Msa1308460 AT2G15490.1 30.162 494 281 17 1 455 1 469 2.04e-56 195
Msa1308460 AT2G15490.3 30.567 494 276 18 1 455 1 466 4.74e-56 194
Msa1308460 AT2G16890.2 30.081 492 280 16 6 466 9 467 1.02e-53 187
Msa1308460 AT2G36800.1 29.518 498 284 13 6 462 12 483 1.09e-53 187
Msa1308460 AT4G34135.1 30.081 492 292 11 2 462 7 477 8.61e-53 185
Msa1308460 AT2G15480.1 32.115 383 220 10 91 455 109 469 1.06e-52 185
Msa1308460 AT2G36770.1 30.123 488 293 18 6 462 14 484 1.20e-52 185
Msa1308460 AT2G15480.2 31.807 393 218 11 91 455 109 479 7.64e-52 182
Msa1308460 AT2G36780.1 30.444 496 281 16 6 462 14 484 1.49e-51 182
Msa1308460 AT1G22340.1 30.099 505 279 22 3 466 10 481 4.18e-51 181
Msa1308460 AT3G53160.1 30.957 491 285 17 6 462 8 478 1.57e-50 179
Msa1308460 AT5G14860.1 30.550 491 280 15 6 462 8 471 1.81e-50 179
Msa1308460 AT1G05675.1 29.106 481 289 14 1 462 1 448 8.96e-50 176
Msa1308460 AT2G36760.1 30.223 493 272 15 6 455 14 477 1.91e-49 176
Msa1308460 AT2G36750.1 27.869 488 303 14 6 462 10 479 3.30e-49 176
Msa1308460 AT2G23260.1 28.870 478 283 13 2 459 6 446 1.88e-48 172
Msa1308460 AT1G05680.1 27.778 486 289 14 1 462 1 448 2.70e-48 172
Msa1308460 AT4G34138.1 29.904 418 230 11 61 455 90 467 8.47e-48 172
Msa1308460 AT1G22360.1 28.947 494 278 20 3 456 7 467 1.29e-47 171
Msa1308460 AT2G36790.1 29.600 500 280 15 6 462 13 483 2.27e-47 171
Msa1308460 AT5G03490.1 28.953 487 277 16 2 462 15 458 2.29e-47 170
Msa1308460 AT3G53150.1 29.492 512 270 16 3 455 19 498 3.11e-47 171
Msa1308460 AT1G22380.1 29.583 480 278 17 3 449 10 462 5.34e-47 169
Msa1308460 AT1G22400.1 29.243 489 284 17 2 455 9 470 7.70e-47 169
Msa1308460 AT2G16890.3 29.399 449 254 15 6 424 9 424 9.09e-47 167
Msa1308460 AT2G43820.1 28.024 496 278 18 2 468 3 448 1.19e-46 167
Msa1308460 AT2G31790.1 34.815 270 141 6 209 462 202 452 1.62e-46 167
Msa1308460 AT3G46680.1 28.810 479 287 16 1 462 4 445 3.36e-46 166
Msa1308460 AT2G43840.2 26.176 489 290 14 4 467 5 447 9.66e-46 165
Msa1308460 AT3G55700.1 28.690 481 299 14 2 469 4 453 1.62e-45 165
Msa1308460 AT2G31750.1 34.432 273 145 7 209 466 201 454 2.83e-45 164
Msa1308460 AT2G23250.1 28.758 459 278 14 17 462 9 431 3.05e-45 164
Msa1308460 AT3G46650.1 27.872 470 279 16 1 459 5 425 3.67e-45 163
Msa1308460 AT1G24100.1 28.719 484 278 14 4 460 9 452 4.19e-45 164
Msa1308460 AT2G30140.2 29.339 484 285 15 2 468 9 452 5.09e-45 163
Msa1308460 AT2G31750.2 34.432 273 145 7 209 466 201 454 6.88e-45 164
Msa1308460 AT2G43840.1 26.176 489 290 14 4 467 5 447 1.04e-44 162
Msa1308460 AT2G30140.1 29.630 486 282 17 2 468 9 453 3.84e-44 161
Msa1308460 AT3G55710.1 29.243 489 290 15 2 469 4 457 4.26e-44 161
Msa1308460 AT3G46700.1 27.966 472 299 12 3 466 6 444 5.03e-44 160
Msa1308460 AT1G10400.1 36.918 279 149 7 192 462 199 458 6.22e-44 160
Msa1308460 AT5G59580.1 27.664 488 289 17 4 469 7 452 1.04e-43 160
Msa1308460 AT5G17050.1 30.833 360 224 7 106 462 115 452 1.23e-43 160
Msa1308460 AT1G22370.2 29.363 487 278 17 3 455 10 464 2.30e-43 159
Msa1308460 AT3G46690.1 27.601 471 299 13 3 462 6 445 5.63e-43 158
Msa1308460 AT2G36970.1 26.210 496 308 16 2 468 6 472 9.03e-43 158
Msa1308460 AT5G59590.1 27.253 466 300 14 3 459 7 442 1.46e-42 157
Msa1308460 AT1G22360.2 27.935 494 271 20 3 456 7 455 4.18e-42 155
Msa1308460 AT5G05880.1 32.660 297 179 7 177 469 172 451 4.31e-42 155
Msa1308460 AT5G12890.1 28.838 482 262 17 7 443 11 456 1.77e-41 154
Msa1308460 AT1G78270.1 27.016 496 274 18 2 450 9 463 2.46e-41 154
Msa1308460 AT5G38010.1 27.368 475 300 13 2 462 6 449 7.63e-41 152
Msa1308460 AT1G05560.1 31.025 361 217 12 111 462 110 447 1.11e-39 149
Msa1308460 AT1G30530.1 31.073 354 212 10 106 455 114 439 1.47e-39 149
Msa1308460 AT1G22370.1 34.708 291 157 10 180 455 22 294 1.56e-39 145
Msa1308460 AT4G15550.1 32.320 362 217 13 111 462 126 469 1.57e-39 149
Msa1308460 AT1G05530.1 29.235 366 228 10 111 466 110 454 2.27e-39 148
Msa1308460 AT2G30150.2 28.726 463 283 15 6 455 13 441 2.80e-39 148
Msa1308460 AT1G05560.2 31.025 361 217 12 111 462 160 497 3.37e-39 149
Msa1308460 AT3G46660.1 27.061 473 292 16 4 459 12 448 4.46e-39 147
Msa1308460 AT2G30150.1 28.976 459 279 15 10 455 1 425 4.89e-39 147
Msa1308460 AT5G17030.1 28.954 411 258 11 64 469 77 458 7.71e-39 147
Msa1308460 AT3G46670.1 27.813 471 283 17 7 459 10 441 7.72e-39 146
Msa1308460 AT1G73880.1 29.314 481 288 20 4 462 12 462 1.09e-38 146
Msa1308460 AT5G38040.1 26.856 458 284 15 17 459 21 442 1.25e-38 146
Msa1308460 AT5G49690.1 26.339 448 295 10 6 443 10 432 1.33e-38 146
Msa1308460 AT1G51210.1 28.509 456 269 17 4 442 18 433 3.63e-38 144
Msa1308460 AT5G05860.1 34.375 256 150 5 211 463 204 444 8.20e-38 144
Msa1308460 AT3G11340.1 31.973 294 181 6 179 469 170 447 4.21e-37 142
Msa1308460 AT5G05890.1 32.660 297 179 8 177 469 176 455 6.56e-37 141
Msa1308460 AT2G26480.1 34.014 294 166 9 177 462 168 441 2.18e-36 140
Msa1308460 AT5G05870.1 29.577 355 220 9 120 466 122 454 2.83e-36 139
Msa1308460 AT3G21560.1 27.361 413 260 12 73 466 81 472 1.85e-35 138
Msa1308460 AT5G17040.1 28.502 414 242 13 58 455 53 428 2.28e-35 137
Msa1308460 AT2G28080.1 30.919 359 221 13 95 445 113 452 2.94e-35 137
Msa1308460 AT3G02100.1 26.190 462 282 14 4 441 11 437 5.49e-35 136
Msa1308460 AT5G05900.1 30.928 291 172 8 177 462 177 443 9.26e-35 135
Msa1308460 AT4G15490.1 25.662 491 311 18 2 466 4 466 1.73e-34 135
Msa1308460 AT1G06000.1 34.962 266 154 7 211 466 177 433 5.78e-34 132
Msa1308460 AT4G15480.1 27.762 353 230 7 123 466 142 478 8.58e-34 133
Msa1308460 AT5G65550.1 25.499 451 283 14 4 431 7 427 9.21e-34 132
Msa1308460 AT3G46720.1 34.559 272 145 7 199 462 190 436 1.30e-33 132
Msa1308460 AT4G14090.1 32.800 250 142 9 213 455 214 444 4.69e-33 130
Msa1308460 AT5G17040.2 30.872 298 177 8 173 462 57 333 1.76e-32 127
Msa1308460 AT4G15500.1 29.856 278 172 6 198 466 199 462 1.83e-32 129
Msa1308460 AT3G29630.1 26.991 452 280 14 1 440 1 414 2.62e-32 128
Msa1308460 AT4G27570.1 26.818 440 278 12 4 432 5 411 8.98e-32 127
Msa1308460 AT1G50580.1 26.403 481 304 14 1 468 1 444 3.18e-31 125
Msa1308460 AT5G54010.1 26.862 443 281 12 1 432 1 411 3.23e-31 125
Msa1308460 AT4G27560.1 26.802 444 273 14 4 432 5 411 2.71e-30 122
Msa1308460 AT1G64910.1 26.049 453 280 15 1 440 1 411 1.03e-29 121
Msa1308460 AT2G22590.1 24.169 451 313 11 4 442 13 446 3.39e-29 120
Msa1308460 AT5G53990.1 26.726 449 268 16 1 432 1 405 4.34e-29 119
Msa1308460 AT3G29630.2 27.069 447 260 15 1 440 1 388 3.97e-28 116
Msa1308460 AT3G22250.1 35.233 193 96 8 257 445 273 440 6.73e-27 113
Msa1308460 AT5G37950.2 26.957 345 211 11 52 380 19 338 9.93e-27 110
Msa1308460 AT5G54060.1 25.652 460 309 13 7 455 14 451 2.69e-26 111
Msa1308460 AT5G37950.1 27.326 344 217 11 52 380 19 344 8.36e-26 108
Msa1308460 AT2G22930.1 23.347 484 292 14 1 464 1 425 1.32e-25 109
Msa1308460 AT1G64920.1 25.926 459 273 19 1 437 1 414 1.01e-24 106
Msa1308460 AT4G09500.2 25.556 450 272 16 1 432 1 405 2.25e-23 102
Msa1308460 AT4G09500.1 25.734 443 255 16 1 432 1 380 1.04e-22 100
Msa1308460 AT4G34135.2 26.667 330 205 10 2 304 7 326 1.09e-19 90.5

Find 86 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTAATTCAATGTGTTTA+AGG 0.145467 8_4:-4751489 Msa1308460:CDS
CTTTCACAAAGAATTATTTC+TGG 0.191482 8_4:+4751694 None:intergenic
TTGGAAAGAAACAAAGAAAA+TGG 0.208037 8_4:-4751253 Msa1308460:CDS
ATTAGACTCATTTCTAATAA+TGG 0.226365 8_4:+4751522 None:intergenic
ATTCAACTTGTGGAATTAAA+TGG 0.235675 8_4:+4752196 None:intergenic
TAAAGAAACAAGGTTAGTTT+TGG 0.255731 8_4:+4751933 None:intergenic
ATTTGGAGCCAGATATTATA+AGG 0.256438 8_4:-4751588 Msa1308460:CDS
AATCAGCACTTTCACTGATT+TGG 0.256891 8_4:-4751605 Msa1308460:CDS
TCTGTTCTTTATGTATGTTT+TGG 0.258567 8_4:-4751442 Msa1308460:CDS
ATGAGTTTCATTTGTGTTGC+AGG 0.282778 8_4:+4752006 None:intergenic
TGAAGAACCCTTATAATATC+TGG 0.294429 8_4:+4751580 None:intergenic
GGAATATCTTTGATATGAAA+TGG 0.301284 8_4:+4751715 None:intergenic
CAACTCAATGAGTTAGCATT+TGG 0.306842 8_4:-4751394 Msa1308460:CDS
CAATGAATTCATTGTGTTGT+TGG 0.323001 8_4:+4752157 None:intergenic
TTTACTTCTTCTTGTAGAAA+TGG 0.328693 8_4:+4751967 None:intergenic
GTATTTACCAAATGGTTTCT+TGG 0.330315 8_4:-4751272 Msa1308460:CDS
TTAGACTCATTTCTAATAAT+GGG 0.340721 8_4:+4751523 None:intergenic
TATGAAACTGTGAATATTCC+AGG 0.341809 8_4:-4751748 Msa1308460:CDS
ACTTTGGAGAGTGTGGTTAA+TGG 0.345363 8_4:-4751142 Msa1308460:CDS
CTTGGTCATGGTTCAATTGG+TGG 0.364820 8_4:-4751193 Msa1308460:CDS
TTCAAGACTTGTTGCATTGA+AGG 0.367448 8_4:+4752099 None:intergenic
AACCTTGTTTCTTTAATCTT+CGG 0.368883 8_4:-4751925 Msa1308460:CDS
TTCAATGTGTTTAAGGTGGT+TGG 0.369384 8_4:-4751482 Msa1308460:CDS
GCACCACAAGTTGAGATTCT+TGG 0.370993 8_4:-4751211 Msa1308460:CDS
GAAACAGAGTCGTCGAGATT+CGG 0.378552 8_4:+4751799 None:intergenic
TTTCTTTCCAAGAAACCATT+TGG 0.380414 8_4:+4751265 None:intergenic
CCACTTTCATCATCAACCTT+TGG 0.392355 8_4:+4751034 None:intergenic
AATCTTTGTTCTGCAAATAG+AGG 0.409100 8_4:+4751100 None:intergenic
ATTCTTGGTCATGGTTCAAT+TGG 0.416708 8_4:-4751196 Msa1308460:CDS
AATAGAGGCCATGCAATCAT+AGG 0.417514 8_4:+4751115 None:intergenic
GCAGAGTTAACAGCTTTACT+TGG 0.420196 8_4:+4751328 None:intergenic
AGAAGAATGAATTCTATGTT+TGG 0.423723 8_4:+4752066 None:intergenic
ATTGCTATGGTTCCTTCCCC+TGG 0.428614 8_4:-4752225 Msa1308460:CDS
CCGTTAGAGTATTTACCAAA+TGG 0.450358 8_4:-4751280 Msa1308460:CDS
CCAAAGGTTGATGATGAAAG+TGG 0.450373 8_4:-4751034 Msa1308460:CDS
ATGGATTGGTTGTTCCATCA+TGG 0.450594 8_4:-4751234 Msa1308460:CDS
TTGTGGTTGGGGTTCAACTT+TGG 0.450652 8_4:-4751158 Msa1308460:CDS
GTGTTGTTGGAGTAATTGTT+TGG 0.475857 8_4:+4752170 None:intergenic
TTTGGAGCCAGATATTATAA+GGG 0.493888 8_4:-4751587 Msa1308460:CDS
TGGATTGGTTGTTCCATCAT+GGG 0.505053 8_4:-4751233 Msa1308460:CDS
GAATATCTTTGATATGAAAT+GGG 0.509722 8_4:+4751716 None:intergenic
GGGTTCAACTTTGGAGAGTG+TGG 0.511321 8_4:-4751149 Msa1308460:CDS
CAAGTTGAGATTCTTGGTCA+TGG 0.513039 8_4:-4751205 Msa1308460:CDS
CATGGAAGGTGATGAAAGCT+TGG 0.514512 8_4:-4750969 Msa1308460:CDS
CATACATAAAGAACAGAACT+TGG 0.526486 8_4:+4751448 None:intergenic
GGAATTAAATGGCTAAGTCC+AGG 0.532715 8_4:+4752207 None:intergenic
TGTTTGGCAAATTCAACTTG+TGG 0.534373 8_4:+4752186 None:intergenic
AAGAAACAAAGAAAATGGAT+TGG 0.539283 8_4:-4751248 Msa1308460:CDS
AGAATGAATTCTATGTTTGG+TGG 0.540562 8_4:+4752069 None:intergenic
GCAGGTTCAAGATTAATCTC+TGG 0.542912 8_4:+4752024 None:intergenic
TCAACTTGTGGTGCCCATGA+TGG 0.543506 8_4:+4751220 None:intergenic
GAATTAAATGGCTAAGTCCA+GGG 0.544089 8_4:+4752208 None:intergenic
TGAAATGGGATGACACAACC+TGG 0.545651 8_4:+4751730 None:intergenic
CAAGTGAACACGGTTCATCT+AGG 0.546895 8_4:-4750898 Msa1308460:CDS
ACATTCCTCATTCCAACACT+TGG 0.548904 8_4:-4752132 Msa1308460:CDS
TATAGCAACTTCATGTGCAT+CGG 0.554116 8_4:+4751891 None:intergenic
TTTCTAATAATGGGTCCCAC+TGG 0.554519 8_4:+4751532 None:intergenic
GAGTGGCAAGAAATTCTTGT+GGG 0.556381 8_4:-4751362 Msa1308460:CDS
ATGGTGTTCCTATGATTGCA+TGG 0.560119 8_4:-4751123 Msa1308460:CDS
TTAATTCAATGTGTTTAAGG+TGG 0.567516 8_4:-4751486 Msa1308460:CDS
GGAGTGAGAGGACCAAGTGT+TGG 0.574957 8_4:+4752120 None:intergenic
GAGGACCAAGTGTTGGAATG+AGG 0.575225 8_4:+4752127 None:intergenic
GAGCACCTGAGGCATAGAAA+AGG 0.577258 8_4:+4751848 None:intergenic
GCATTTGGATTAGAATTGAG+TGG 0.583901 8_4:-4751379 Msa1308460:CDS
CCATTTGGTAAATACTCTAA+CGG 0.585513 8_4:+4751280 None:intergenic
AAACCTTGTGTTTATCCAGT+GGG 0.588499 8_4:-4751547 Msa1308460:CDS
AGAATCAAAGAATTGAGTGA+TGG 0.599141 8_4:-4750935 Msa1308460:CDS
ACATAAAGAACAGAACTTGG+TGG 0.614992 8_4:+4751451 None:intergenic
TGAACACGGTTCATCTAGGA+AGG 0.615852 8_4:-4750894 Msa1308460:CDS
GAAACCTTGTGTTTATCCAG+TGG 0.617602 8_4:-4751548 Msa1308460:CDS
TGTTGCATTGAAGGAGTGAG+AGG 0.618094 8_4:+4752108 None:intergenic
TGAGAATGAAAGAGCACCTG+AGG 0.624676 8_4:+4751837 None:intergenic
TAAATGTGTAAAGAGAATCA+TGG 0.637525 8_4:-4750987 Msa1308460:CDS
CAAAGGTTGATGATGAAAGT+GGG 0.642278 8_4:-4751033 Msa1308460:CDS
GTTCAAGATTAATCTCTGGA+AGG 0.643047 8_4:+4752028 None:intergenic
GACCGAAGATTAAAGAAACA+AGG 0.654587 8_4:+4751923 None:intergenic
AAATGGCTAAGTCCAGGGGA+AGG 0.656957 8_4:+4752213 None:intergenic
TGTGTAAAGAGAATCATGGA+AGG 0.659730 8_4:-4750983 Msa1308460:CDS
CAAAGTGGCTGTGAGGCCAA+AGG 0.659851 8_4:-4751050 Msa1308460:CDS
TGACCAAGAATCTCAACTTG+TGG 0.660415 8_4:+4751208 None:intergenic
TGAGTGGCAAGAAATTCTTG+TGG 0.685840 8_4:-4751363 Msa1308460:CDS
GGTCCCACTGGATAAACACA+AGG 0.696810 8_4:+4751544 None:intergenic
ATTGACAGATGTGCTCAAAG+TGG 0.698009 8_4:-4751065 Msa1308460:CDS
AATTAAATGGCTAAGTCCAG+GGG 0.708782 8_4:+4752209 None:intergenic
ATGTGCTCAAAGTGGCTGTG+AGG 0.734532 8_4:-4751057 Msa1308460:CDS
GCTGTTGCAACAAGTGAACA+CGG 0.748601 8_4:-4750908 Msa1308460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAACATACATTGCTA+TGG - chr8_4:4750861-4750880 Msa1308460:CDS 20.0%
!! GAATATCTTTGATATGAAAT+GGG + chr8_4:4751386-4751405 None:intergenic 20.0%
!! TTAGACTCATTTCTAATAAT+GGG + chr8_4:4751579-4751598 None:intergenic 20.0%
!! ATTAGACTCATTTCTAATAA+TGG + chr8_4:4751580-4751599 None:intergenic 20.0%
!! ACATTAATTCAATGTGTTTA+AGG - chr8_4:4751610-4751629 Msa1308460:CDS 20.0%
!! TAAAAAAACATACATTGCTA+TGG - chr8_4:4750861-4750880 Msa1308460:CDS 20.0%
!! GAATATCTTTGATATGAAAT+GGG + chr8_4:4751386-4751405 None:intergenic 20.0%
!! TTAGACTCATTTCTAATAAT+GGG + chr8_4:4751579-4751598 None:intergenic 20.0%
!! ATTAGACTCATTTCTAATAA+TGG + chr8_4:4751580-4751599 None:intergenic 20.0%
!! ACATTAATTCAATGTGTTTA+AGG - chr8_4:4751610-4751629 Msa1308460:CDS 20.0%
! ATTCAACTTGTGGAATTAAA+TGG + chr8_4:4750906-4750925 None:intergenic 25.0%
! AGAAGAATGAATTCTATGTT+TGG + chr8_4:4751036-4751055 None:intergenic 25.0%
! TTTACTTCTTCTTGTAGAAA+TGG + chr8_4:4751135-4751154 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG + chr8_4:4751169-4751188 None:intergenic 25.0%
!! AACCTTGTTTCTTTAATCTT+CGG - chr8_4:4751174-4751193 Msa1308460:CDS 25.0%
!!! TGAAGTAGAGTTTTTAGAAT+CGG - chr8_4:4751326-4751345 Msa1308460:CDS 25.0%
! GGAATATCTTTGATATGAAA+TGG + chr8_4:4751387-4751406 None:intergenic 25.0%
! CTTTCACAAAGAATTATTTC+TGG + chr8_4:4751408-4751427 None:intergenic 25.0%
! TTAATTCAATGTGTTTAAGG+TGG - chr8_4:4751613-4751632 Msa1308460:CDS 25.0%
!! TCTGTTCTTTATGTATGTTT+TGG - chr8_4:4751657-4751676 Msa1308460:CDS 25.0%
!! CTGTTCTTTATGTATGTTTT+GGG - chr8_4:4751658-4751677 Msa1308460:CDS 25.0%
! TTGGAAAGAAACAAAGAAAA+TGG - chr8_4:4751846-4751865 Msa1308460:CDS 25.0%
! AAGAAACAAAGAAAATGGAT+TGG - chr8_4:4751851-4751870 Msa1308460:CDS 25.0%
! TAAATGTGTAAAGAGAATCA+TGG - chr8_4:4752112-4752131 Msa1308460:CDS 25.0%
! ATTCAACTTGTGGAATTAAA+TGG + chr8_4:4750906-4750925 None:intergenic 25.0%
! AGAAGAATGAATTCTATGTT+TGG + chr8_4:4751036-4751055 None:intergenic 25.0%
! TTTACTTCTTCTTGTAGAAA+TGG + chr8_4:4751135-4751154 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG + chr8_4:4751169-4751188 None:intergenic 25.0%
!! AACCTTGTTTCTTTAATCTT+CGG - chr8_4:4751174-4751193 Msa1308460:CDS 25.0%
!!! TGAAGTAGAGTTTTTAGAAT+CGG - chr8_4:4751326-4751345 Msa1308460:CDS 25.0%
! GGAATATCTTTGATATGAAA+TGG + chr8_4:4751387-4751406 None:intergenic 25.0%
! CTTTCACAAAGAATTATTTC+TGG + chr8_4:4751408-4751427 None:intergenic 25.0%
! TTAATTCAATGTGTTTAAGG+TGG - chr8_4:4751613-4751632 Msa1308460:CDS 25.0%
!! TCTGTTCTTTATGTATGTTT+TGG - chr8_4:4751657-4751676 Msa1308460:CDS 25.0%
!! CTGTTCTTTATGTATGTTTT+GGG - chr8_4:4751658-4751677 Msa1308460:CDS 25.0%
! TTGGAAAGAAACAAAGAAAA+TGG - chr8_4:4751846-4751865 Msa1308460:CDS 25.0%
! AAGAAACAAAGAAAATGGAT+TGG - chr8_4:4751851-4751870 Msa1308460:CDS 25.0%
! TAAATGTGTAAAGAGAATCA+TGG - chr8_4:4752112-4752131 Msa1308460:CDS 25.0%
CAATGAATTCATTGTGTTGT+TGG + chr8_4:4750945-4750964 None:intergenic 30.0%
AGAATGAATTCTATGTTTGG+TGG + chr8_4:4751033-4751052 None:intergenic 30.0%
! TTCTAAAAACTCTACTTCAG+AGG + chr8_4:4751325-4751344 None:intergenic 30.0%
TATGAAACTGTGAATATTCC+AGG - chr8_4:4751351-4751370 Msa1308460:CDS 30.0%
CAAAAACTCTCATTAGTTGA+TGG - chr8_4:4751465-4751484 Msa1308460:CDS 30.0%
! ATTTGGAGCCAGATATTATA+AGG - chr8_4:4751511-4751530 Msa1308460:CDS 30.0%
! TTTGGAGCCAGATATTATAA+GGG - chr8_4:4751512-4751531 Msa1308460:CDS 30.0%
TGAAGAACCCTTATAATATC+TGG + chr8_4:4751522-4751541 None:intergenic 30.0%
CATACATAAAGAACAGAACT+TGG + chr8_4:4751654-4751673 None:intergenic 30.0%
!!! GTTAACTCTGCTTATTTTGT+TGG - chr8_4:4751783-4751802 Msa1308460:CDS 30.0%
CCATTTGGTAAATACTCTAA+CGG + chr8_4:4751822-4751841 None:intergenic 30.0%
GTATTTACCAAATGGTTTCT+TGG - chr8_4:4751827-4751846 Msa1308460:CDS 30.0%
TTTCTTTCCAAGAAACCATT+TGG + chr8_4:4751837-4751856 None:intergenic 30.0%
!!! TTTTTTGAGTCATTGTGGTT+GGG - chr8_4:4751929-4751948 Msa1308460:CDS 30.0%
AATCTTTGTTCTGCAAATAG+AGG + chr8_4:4752002-4752021 None:intergenic 30.0%
AGAATCAAAGAATTGAGTGA+TGG - chr8_4:4752164-4752183 Msa1308460:CDS 30.0%
CAATGAATTCATTGTGTTGT+TGG + chr8_4:4750945-4750964 None:intergenic 30.0%
AGAATGAATTCTATGTTTGG+TGG + chr8_4:4751033-4751052 None:intergenic 30.0%
! TTCTAAAAACTCTACTTCAG+AGG + chr8_4:4751325-4751344 None:intergenic 30.0%
TATGAAACTGTGAATATTCC+AGG - chr8_4:4751351-4751370 Msa1308460:CDS 30.0%
CAAAAACTCTCATTAGTTGA+TGG - chr8_4:4751465-4751484 Msa1308460:CDS 30.0%
! ATTTGGAGCCAGATATTATA+AGG - chr8_4:4751511-4751530 Msa1308460:CDS 30.0%
! TTTGGAGCCAGATATTATAA+GGG - chr8_4:4751512-4751531 Msa1308460:CDS 30.0%
TGAAGAACCCTTATAATATC+TGG + chr8_4:4751522-4751541 None:intergenic 30.0%
CATACATAAAGAACAGAACT+TGG + chr8_4:4751654-4751673 None:intergenic 30.0%
!!! GTTAACTCTGCTTATTTTGT+TGG - chr8_4:4751783-4751802 Msa1308460:CDS 30.0%
CCATTTGGTAAATACTCTAA+CGG + chr8_4:4751822-4751841 None:intergenic 30.0%
GTATTTACCAAATGGTTTCT+TGG - chr8_4:4751827-4751846 Msa1308460:CDS 30.0%
TTTCTTTCCAAGAAACCATT+TGG + chr8_4:4751837-4751856 None:intergenic 30.0%
!!! TTTTTTGAGTCATTGTGGTT+GGG - chr8_4:4751929-4751948 Msa1308460:CDS 30.0%
AATCTTTGTTCTGCAAATAG+AGG + chr8_4:4752002-4752021 None:intergenic 30.0%
AGAATCAAAGAATTGAGTGA+TGG - chr8_4:4752164-4752183 Msa1308460:CDS 30.0%
AATTAAATGGCTAAGTCCAG+GGG + chr8_4:4750893-4750912 None:intergenic 35.0%
GAATTAAATGGCTAAGTCCA+GGG + chr8_4:4750894-4750913 None:intergenic 35.0%
TGTTTGGCAAATTCAACTTG+TGG + chr8_4:4750916-4750935 None:intergenic 35.0%
! GTGTTGTTGGAGTAATTGTT+TGG + chr8_4:4750932-4750951 None:intergenic 35.0%
!! TTCAAGACTTGTTGCATTGA+AGG + chr8_4:4751003-4751022 None:intergenic 35.0%
GTTCAAGATTAATCTCTGGA+AGG + chr8_4:4751074-4751093 None:intergenic 35.0%
ATGAGTTTCATTTGTGTTGC+AGG + chr8_4:4751096-4751115 None:intergenic 35.0%
GACCGAAGATTAAAGAAACA+AGG + chr8_4:4751179-4751198 None:intergenic 35.0%
TATAGCAACTTCATGTGCAT+CGG + chr8_4:4751211-4751230 None:intergenic 35.0%
! AATCAGCACTTTCACTGATT+TGG - chr8_4:4751494-4751513 Msa1308460:CDS 35.0%
AAACCTTGTGTTTATCCAGT+GGG - chr8_4:4751552-4751571 Msa1308460:CDS 35.0%
! TTCAATGTGTTTAAGGTGGT+TGG - chr8_4:4751617-4751636 Msa1308460:CDS 35.0%
ACATAAAGAACAGAACTTGG+TGG + chr8_4:4751651-4751670 None:intergenic 35.0%
!!! CTTTATGTATGTTTTGGGAG+TGG - chr8_4:4751663-4751682 Msa1308460:CDS 35.0%
CAACTCAATGAGTTAGCATT+TGG - chr8_4:4751705-4751724 Msa1308460:CDS 35.0%
! GCATTTGGATTAGAATTGAG+TGG - chr8_4:4751720-4751739 Msa1308460:CDS 35.0%
! CCGTTAGAGTATTTACCAAA+TGG - chr8_4:4751819-4751838 Msa1308460:CDS 35.0%
ATTCTTGGTCATGGTTCAAT+TGG - chr8_4:4751903-4751922 Msa1308460:CDS 35.0%
!!! GTTTTTTGAGTCATTGTGGT+TGG - chr8_4:4751928-4751947 Msa1308460:CDS 35.0%
!!! TTTTTGAGTCATTGTGGTTG+GGG - chr8_4:4751930-4751949 Msa1308460:CDS 35.0%
!! CAAAGGTTGATGATGAAAGT+GGG - chr8_4:4752066-4752085 Msa1308460:CDS 35.0%
TGTGTAAAGAGAATCATGGA+AGG - chr8_4:4752116-4752135 Msa1308460:CDS 35.0%
AATTAAATGGCTAAGTCCAG+GGG + chr8_4:4750893-4750912 None:intergenic 35.0%
GAATTAAATGGCTAAGTCCA+GGG + chr8_4:4750894-4750913 None:intergenic 35.0%
TGTTTGGCAAATTCAACTTG+TGG + chr8_4:4750916-4750935 None:intergenic 35.0%
! GTGTTGTTGGAGTAATTGTT+TGG + chr8_4:4750932-4750951 None:intergenic 35.0%
!! TTCAAGACTTGTTGCATTGA+AGG + chr8_4:4751003-4751022 None:intergenic 35.0%
GTTCAAGATTAATCTCTGGA+AGG + chr8_4:4751074-4751093 None:intergenic 35.0%
ATGAGTTTCATTTGTGTTGC+AGG + chr8_4:4751096-4751115 None:intergenic 35.0%
GACCGAAGATTAAAGAAACA+AGG + chr8_4:4751179-4751198 None:intergenic 35.0%
TATAGCAACTTCATGTGCAT+CGG + chr8_4:4751211-4751230 None:intergenic 35.0%
! AATCAGCACTTTCACTGATT+TGG - chr8_4:4751494-4751513 Msa1308460:CDS 35.0%
AAACCTTGTGTTTATCCAGT+GGG - chr8_4:4751552-4751571 Msa1308460:CDS 35.0%
! TTCAATGTGTTTAAGGTGGT+TGG - chr8_4:4751617-4751636 Msa1308460:CDS 35.0%
ACATAAAGAACAGAACTTGG+TGG + chr8_4:4751651-4751670 None:intergenic 35.0%
!!! CTTTATGTATGTTTTGGGAG+TGG - chr8_4:4751663-4751682 Msa1308460:CDS 35.0%
CAACTCAATGAGTTAGCATT+TGG - chr8_4:4751705-4751724 Msa1308460:CDS 35.0%
! GCATTTGGATTAGAATTGAG+TGG - chr8_4:4751720-4751739 Msa1308460:CDS 35.0%
! CCGTTAGAGTATTTACCAAA+TGG - chr8_4:4751819-4751838 Msa1308460:CDS 35.0%
ATTCTTGGTCATGGTTCAAT+TGG - chr8_4:4751903-4751922 Msa1308460:CDS 35.0%
!!! GTTTTTTGAGTCATTGTGGT+TGG - chr8_4:4751928-4751947 Msa1308460:CDS 35.0%
!!! TTTTTGAGTCATTGTGGTTG+GGG - chr8_4:4751930-4751949 Msa1308460:CDS 35.0%
!! CAAAGGTTGATGATGAAAGT+GGG - chr8_4:4752066-4752085 Msa1308460:CDS 35.0%
TGTGTAAAGAGAATCATGGA+AGG - chr8_4:4752116-4752135 Msa1308460:CDS 35.0%
GGAATTAAATGGCTAAGTCC+AGG + chr8_4:4750895-4750914 None:intergenic 40.0%
ACATTCCTCATTCCAACACT+TGG - chr8_4:4750967-4750986 Msa1308460:CDS 40.0%
!!! TCTGGAAGGTGTTTTACTTG+AGG + chr8_4:4751060-4751079 None:intergenic 40.0%
GCAGGTTCAAGATTAATCTC+TGG + chr8_4:4751078-4751097 None:intergenic 40.0%
! TCTTACCTTTTCTATGCCTC+AGG - chr8_4:4751246-4751265 Msa1308460:CDS 40.0%
GAAACCTTGTGTTTATCCAG+TGG - chr8_4:4751551-4751570 Msa1308460:CDS 40.0%
!! TTTCTAATAATGGGTCCCAC+TGG + chr8_4:4751570-4751589 None:intergenic 40.0%
!!! TATGTATGTTTTGGGAGTGG+TGG - chr8_4:4751666-4751685 Msa1308460:CDS 40.0%
TGAGTGGCAAGAAATTCTTG+TGG - chr8_4:4751736-4751755 Msa1308460:CDS 40.0%
GAGTGGCAAGAAATTCTTGT+GGG - chr8_4:4751737-4751756 Msa1308460:CDS 40.0%
GCAGAGTTAACAGCTTTACT+TGG + chr8_4:4751774-4751793 None:intergenic 40.0%
!! ATGGATTGGTTGTTCCATCA+TGG - chr8_4:4751865-4751884 Msa1308460:CDS 40.0%
!! TGGATTGGTTGTTCCATCAT+GGG - chr8_4:4751866-4751885 Msa1308460:CDS 40.0%
TGACCAAGAATCTCAACTTG+TGG + chr8_4:4751894-4751913 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG - chr8_4:4751894-4751913 Msa1308460:CDS 40.0%
!!! GGTGGTTTTTTGAGTCATTG+TGG - chr8_4:4751924-4751943 Msa1308460:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+TGG - chr8_4:4751957-4751976 Msa1308460:CDS 40.0%
ATGGTGTTCCTATGATTGCA+TGG - chr8_4:4751976-4751995 Msa1308460:CDS 40.0%
AATAGAGGCCATGCAATCAT+AGG + chr8_4:4751987-4752006 None:intergenic 40.0%
ATTGACAGATGTGCTCAAAG+TGG - chr8_4:4752034-4752053 Msa1308460:CDS 40.0%
CCACTTTCATCATCAACCTT+TGG + chr8_4:4752068-4752087 None:intergenic 40.0%
!! CCAAAGGTTGATGATGAAAG+TGG - chr8_4:4752065-4752084 Msa1308460:CDS 40.0%
GGAATTAAATGGCTAAGTCC+AGG + chr8_4:4750895-4750914 None:intergenic 40.0%
ACATTCCTCATTCCAACACT+TGG - chr8_4:4750967-4750986 Msa1308460:CDS 40.0%
!!! TCTGGAAGGTGTTTTACTTG+AGG + chr8_4:4751060-4751079 None:intergenic 40.0%
GCAGGTTCAAGATTAATCTC+TGG + chr8_4:4751078-4751097 None:intergenic 40.0%
! TCTTACCTTTTCTATGCCTC+AGG - chr8_4:4751246-4751265 Msa1308460:CDS 40.0%
GAAACCTTGTGTTTATCCAG+TGG - chr8_4:4751551-4751570 Msa1308460:CDS 40.0%
!! TTTCTAATAATGGGTCCCAC+TGG + chr8_4:4751570-4751589 None:intergenic 40.0%
!!! TATGTATGTTTTGGGAGTGG+TGG - chr8_4:4751666-4751685 Msa1308460:CDS 40.0%
TGAGTGGCAAGAAATTCTTG+TGG - chr8_4:4751736-4751755 Msa1308460:CDS 40.0%
GAGTGGCAAGAAATTCTTGT+GGG - chr8_4:4751737-4751756 Msa1308460:CDS 40.0%
GCAGAGTTAACAGCTTTACT+TGG + chr8_4:4751774-4751793 None:intergenic 40.0%
!! ATGGATTGGTTGTTCCATCA+TGG - chr8_4:4751865-4751884 Msa1308460:CDS 40.0%
!! TGGATTGGTTGTTCCATCAT+GGG - chr8_4:4751866-4751885 Msa1308460:CDS 40.0%
TGACCAAGAATCTCAACTTG+TGG + chr8_4:4751894-4751913 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG - chr8_4:4751894-4751913 Msa1308460:CDS 40.0%
!!! GGTGGTTTTTTGAGTCATTG+TGG - chr8_4:4751924-4751943 Msa1308460:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+TGG - chr8_4:4751957-4751976 Msa1308460:CDS 40.0%
ATGGTGTTCCTATGATTGCA+TGG - chr8_4:4751976-4751995 Msa1308460:CDS 40.0%
AATAGAGGCCATGCAATCAT+AGG + chr8_4:4751987-4752006 None:intergenic 40.0%
ATTGACAGATGTGCTCAAAG+TGG - chr8_4:4752034-4752053 Msa1308460:CDS 40.0%
CCACTTTCATCATCAACCTT+TGG + chr8_4:4752068-4752087 None:intergenic 40.0%
!! CCAAAGGTTGATGATGAAAG+TGG - chr8_4:4752065-4752084 Msa1308460:CDS 40.0%
TGTTGCATTGAAGGAGTGAG+AGG + chr8_4:4750994-4751013 None:intergenic 45.0%
!! TGAGAATGAAAGAGCACCTG+AGG + chr8_4:4751265-4751284 None:intergenic 45.0%
GAAACAGAGTCGTCGAGATT+CGG + chr8_4:4751303-4751322 None:intergenic 45.0%
TGAAATGGGATGACACAACC+TGG + chr8_4:4751372-4751391 None:intergenic 45.0%
! GCACCACAAGTTGAGATTCT+TGG - chr8_4:4751888-4751907 Msa1308460:CDS 45.0%
CTTGGTCATGGTTCAATTGG+TGG - chr8_4:4751906-4751925 Msa1308460:CDS 45.0%
TTGTGGTTGGGGTTCAACTT+TGG - chr8_4:4751941-4751960 Msa1308460:CDS 45.0%
CATGGAAGGTGATGAAAGCT+TGG - chr8_4:4752130-4752149 Msa1308460:CDS 45.0%
GCTGTTGCAACAAGTGAACA+CGG - chr8_4:4752191-4752210 Msa1308460:CDS 45.0%
CAAGTGAACACGGTTCATCT+AGG - chr8_4:4752201-4752220 Msa1308460:CDS 45.0%
TGAACACGGTTCATCTAGGA+AGG - chr8_4:4752205-4752224 Msa1308460:CDS 45.0%
TGTTGCATTGAAGGAGTGAG+AGG + chr8_4:4750994-4751013 None:intergenic 45.0%
!! TGAGAATGAAAGAGCACCTG+AGG + chr8_4:4751265-4751284 None:intergenic 45.0%
GAAACAGAGTCGTCGAGATT+CGG + chr8_4:4751303-4751322 None:intergenic 45.0%
TGAAATGGGATGACACAACC+TGG + chr8_4:4751372-4751391 None:intergenic 45.0%
! GCACCACAAGTTGAGATTCT+TGG - chr8_4:4751888-4751907 Msa1308460:CDS 45.0%
CTTGGTCATGGTTCAATTGG+TGG - chr8_4:4751906-4751925 Msa1308460:CDS 45.0%
TTGTGGTTGGGGTTCAACTT+TGG - chr8_4:4751941-4751960 Msa1308460:CDS 45.0%
CATGGAAGGTGATGAAAGCT+TGG - chr8_4:4752130-4752149 Msa1308460:CDS 45.0%
GCTGTTGCAACAAGTGAACA+CGG - chr8_4:4752191-4752210 Msa1308460:CDS 45.0%
CAAGTGAACACGGTTCATCT+AGG - chr8_4:4752201-4752220 Msa1308460:CDS 45.0%
TGAACACGGTTCATCTAGGA+AGG - chr8_4:4752205-4752224 Msa1308460:CDS 45.0%
ATTGCTATGGTTCCTTCCCC+TGG - chr8_4:4750874-4750893 Msa1308460:CDS 50.0%
AAATGGCTAAGTCCAGGGGA+AGG + chr8_4:4750889-4750908 None:intergenic 50.0%
!! GAGGACCAAGTGTTGGAATG+AGG + chr8_4:4750975-4750994 None:intergenic 50.0%
GAGCACCTGAGGCATAGAAA+AGG + chr8_4:4751254-4751273 None:intergenic 50.0%
GGTCCCACTGGATAAACACA+AGG + chr8_4:4751558-4751577 None:intergenic 50.0%
TCAACTTGTGGTGCCCATGA+TGG + chr8_4:4751882-4751901 None:intergenic 50.0%
! GGGTTCAACTTTGGAGAGTG+TGG - chr8_4:4751950-4751969 Msa1308460:CDS 50.0%
ATGTGCTCAAAGTGGCTGTG+AGG - chr8_4:4752042-4752061 Msa1308460:CDS 50.0%
ATTGCTATGGTTCCTTCCCC+TGG - chr8_4:4750874-4750893 Msa1308460:CDS 50.0%
AAATGGCTAAGTCCAGGGGA+AGG + chr8_4:4750889-4750908 None:intergenic 50.0%
!! GAGGACCAAGTGTTGGAATG+AGG + chr8_4:4750975-4750994 None:intergenic 50.0%
GAGCACCTGAGGCATAGAAA+AGG + chr8_4:4751254-4751273 None:intergenic 50.0%
GGTCCCACTGGATAAACACA+AGG + chr8_4:4751558-4751577 None:intergenic 50.0%
TCAACTTGTGGTGCCCATGA+TGG + chr8_4:4751882-4751901 None:intergenic 50.0%
! GGGTTCAACTTTGGAGAGTG+TGG - chr8_4:4751950-4751969 Msa1308460:CDS 50.0%
ATGTGCTCAAAGTGGCTGTG+AGG - chr8_4:4752042-4752061 Msa1308460:CDS 50.0%
GGAGTGAGAGGACCAAGTGT+TGG + chr8_4:4750982-4751001 None:intergenic 55.0%
CAAAGTGGCTGTGAGGCCAA+AGG - chr8_4:4752049-4752068 Msa1308460:CDS 55.0%
GGAGTGAGAGGACCAAGTGT+TGG + chr8_4:4750982-4751001 None:intergenic 55.0%
CAAAGTGGCTGTGAGGCCAA+AGG - chr8_4:4752049-4752068 Msa1308460:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 4750856 4752265 4750856 ID=Msa1308460;Name=Msa1308460
chr8_4 mRNA 4750856 4752265 4750856 ID=Msa1308460-mRNA-1;Parent=Msa1308460;Name=Msa1308460-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|469
chr8_4 exon 4750856 4752265 4750856 ID=Msa1308460-mRNA-1:exon:1424;Parent=Msa1308460-mRNA-1
chr8_4 CDS 4750856 4752265 4750856 ID=Msa1308460-mRNA-1:cds;Parent=Msa1308460-mRNA-1
Gene Sequence

>Msa1308460

ATGAATAAAAAAACATACATTGCTATGGTTCCTTCCCCTGGACTTAGCCATTTAATTCCACAAGTTGAATTTGCCAAACAATTACTCCAACAACACAATGAATTCATTGTCACATTCCTCATTCCAACACTTGGTCCTCTCACTCCTTCAATGCAACAAGTCTTGAACACTCTTCCACCAAACATAGAATTCATTCTTCTTCCTCAAGTAAAACACCTTCCAGAGATTAATCTTGAACCTGCAACACAAATGAAACTCATTGTGAAACATTCTATTCCATTTCTACAAGAAGAAGTAAAATCACTCATTTCCAAAACTAACCTTGTTTCTTTAATCTTCGGTCTATTCTCAACCGATGCACATGAAGTTGCTATACAATTCAACTTATCTTCTTACCTTTTCTATGCCTCAGGTGCTCTTTCATTCTCATTCTTTCTCACTCTTCCGAATCTCGACGACTCTGTTTCCTCTGAAGTAGAGTTTTTAGAATCGGCTTATGAAACTGTGAATATTCCAGGTTGTGTCATCCCATTTCATATCAAAGATATTCCAGAAATAATTCTTTGTGAAAGATCAAATGTAAATTACAAAACATTTCTTGAAGTTTGTCAAAAACTCTCATTAGTTGATGGTTTTATAATCAGCACTTTCACTGATTTGGAGCCAGATATTATAAGGGTTCTTCAAGAAAAAGTGAAACCTTGTGTTTATCCAGTGGGACCCATTATTAGAAATGAGTCTAATTGTGAAGATAACATTAATTCAATGTGTTTAAGGTGGTTGGAAAATCAACCACCAAGTTCTGTTCTTTATGTATGTTTTGGGAGTGGTGGAACAGTTTCTCATGAACAACTCAATGAGTTAGCATTTGGATTAGAATTGAGTGGCAAGAAATTCTTGTGGGTTGTGAGAGTTCCAAGTAAAGCTGTTAACTCTGCTTATTTTGTTGGAGCAAAAGATGATCCGTTAGAGTATTTACCAAATGGTTTCTTGGAAAGAAACAAAGAAAATGGATTGGTTGTTCCATCATGGGCACCACAAGTTGAGATTCTTGGTCATGGTTCAATTGGTGGTTTTTTGAGTCATTGTGGTTGGGGTTCAACTTTGGAGAGTGTGGTTAATGGTGTTCCTATGATTGCATGGCCTCTATTTGCAGAACAAAGATTGAATGCTAGATTATTGACAGATGTGCTCAAAGTGGCTGTGAGGCCAAAGGTTGATGATGAAAGTGGGATAGTGAAAAAAGACGAAGTTGCTAAATGTGTAAAGAGAATCATGGAAGGTGATGAAAGCTTGGAGATACAAAAGAGAATCAAAGAATTGAGTGATGGTGCTGCTGTTGCAACAAGTGAACACGGTTCATCTAGGAAGGCACTCTCTTCTTTAGCATTGAAATTACATAACTTTTGA
Protein sequence

>Msa1308460

MNKKTYIAMVPSPGLSHLIPQVEFAKQLLQQHNEFIVTFLIPTLGPLTPSMQQVLNTLPPNIEFILLPQVKHLPEINLEPATQMKLIVKHSIPFLQEEVKSLISKTNLVSLIFGLFSTDAHEVAIQFNLSSYLFYASGALSFSFFLTLPNLDDSVSSEVEFLESAYETVNIPGCVIPFHIKDIPEIILCERSNVNYKTFLEVCQKLSLVDGFIISTFTDLEPDIIRVLQEKVKPCVYPVGPIIRNESNCEDNINSMCLRWLENQPPSSVLYVCFGSGGTVSHEQLNELAFGLELSGKKFLWVVRVPSKAVNSAYFVGAKDDPLEYLPNGFLERNKENGLVVPSWAPQVEILGHGSIGGFLSHCGWGSTLESVVNGVPMIAWPLFAEQRLNARLLTDVLKVAVRPKVDDESGIVKKDEVAKCVKRIMEGDESLEIQKRIKELSDGAAVATSEHGSSRKALSSLALKLHNF*