Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369230 | XP_003600894.1 | 91.115 | 619 | 29 | 1 | 1 | 619 | 1 | 593 | 0.0 | 1132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369230 | sp|Q8GV43|PLCD6_ARATH | 50.079 | 629 | 258 | 11 | 7 | 614 | 20 | 613 | 0.0 | 603 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369230 | G7JB93 | 91.115 | 619 | 29 | 1 | 1 | 619 | 1 | 593 | 0.0 | 1132 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007990 | Msa0369230 | 0.802424 | 5.647679e-49 | -8.615850e-47 |
| Msa0043500 | Msa0369230 | 0.801038 | 1.087049e-48 | -8.615850e-47 |
| Msa0054820 | Msa0369230 | 0.804979 | 1.665787e-49 | -8.615850e-47 |
| Msa0089980 | Msa0369230 | 0.819296 | 1.250938e-52 | -8.615850e-47 |
| Msa0090010 | Msa0369230 | 0.820936 | 5.269188e-53 | -8.615850e-47 |
| Msa0092410 | Msa0369230 | 0.805392 | 1.364789e-49 | -8.615850e-47 |
| Msa0100160 | Msa0369230 | 0.807632 | 4.597552e-50 | -8.615850e-47 |
| Msa0103250 | Msa0369230 | 0.814576 | 1.435833e-51 | -8.615850e-47 |
| Msa0104670 | Msa0369230 | 0.806813 | 6.854557e-50 | -8.615850e-47 |
| Msa0106620 | Msa0369230 | 0.830274 | 3.220991e-55 | -8.615850e-47 |
| Msa0106710 | Msa0369230 | 0.808946 | 2.412571e-50 | -8.615850e-47 |
| Msa0108410 | Msa0369230 | 0.801293 | 9.641253e-49 | -8.615850e-47 |
| Msa0112270 | Msa0369230 | 0.800597 | 1.337392e-48 | -8.615850e-47 |
| Msa0125650 | Msa0369230 | 0.807216 | 5.632641e-50 | -8.615850e-47 |
| Msa0138360 | Msa0369230 | 0.804322 | 2.284022e-49 | -8.615850e-47 |
| Msa0149300 | Msa0369230 | 0.806045 | 9.954735e-50 | -8.615850e-47 |
| Msa0187030 | Msa0369230 | 0.825819 | 3.806487e-54 | -8.615850e-47 |
| Msa0189040 | Msa0369230 | 0.812296 | 4.552784e-51 | -8.615850e-47 |
| Msa0204840 | Msa0369230 | 0.806592 | 7.632961e-50 | -8.615850e-47 |
| Msa0217700 | Msa0369230 | 0.828266 | 9.890030e-55 | -8.615850e-47 |
| Msa0225220 | Msa0369230 | 0.839623 | 1.418783e-57 | -8.615850e-47 |
| Msa0227340 | Msa0369230 | 0.810517 | 1.108111e-50 | -8.615850e-47 |
| Msa0237210 | Msa0369230 | 0.829635 | 4.610955e-55 | -8.615850e-47 |
| Msa0369230 | Msa0382370 | 0.801497 | 8.758669e-49 | -8.615850e-47 |
| Msa0369230 | Msa0416660 | 0.865559 | 5.410677e-65 | -8.615850e-47 |
| Msa0369230 | Msa0432160 | 0.827452 | 1.552093e-54 | -8.615850e-47 |
| Msa0369230 | Msa0450400 | -0.805738 | 1.154817e-49 | -8.615850e-47 |
| Msa0369230 | Msa0463270 | 0.917765 | 3.562710e-86 | -8.615850e-47 |
| Msa0369230 | Msa0468250 | 0.802822 | 4.675626e-49 | -8.615850e-47 |
| Msa0369230 | Msa0476680 | 0.832992 | 6.886351e-56 | -8.615850e-47 |
| Msa0369230 | Msa0485240 | 0.815686 | 8.140666e-52 | -8.615850e-47 |
| Msa0369230 | Msa0506860 | 0.841434 | 4.763695e-58 | -8.615850e-47 |
| Msa0369230 | Msa0508880 | 0.931306 | 4.589727e-94 | -8.615850e-47 |
| Msa0369230 | Msa0521010 | 0.829932 | 3.902004e-55 | -8.615850e-47 |
| Msa0369230 | Msa0527190 | 0.814780 | 1.294087e-51 | -8.615850e-47 |
| Msa0369230 | Msa0553200 | 0.811462 | 6.918268e-51 | -8.615850e-47 |
| Msa0369230 | Msa0562570 | 0.800318 | 1.524801e-48 | -8.615850e-47 |
| Msa0369230 | Msa0579660 | 0.821529 | 3.847486e-53 | -8.615850e-47 |
| Msa0369230 | Msa0583360 | -0.804718 | 1.888161e-49 | -8.615850e-47 |
| Msa0369230 | Msa0607320 | 0.828844 | 7.172699e-55 | -8.615850e-47 |
| Msa0369230 | Msa0733010 | 0.846933 | 1.590443e-59 | -8.615850e-47 |
| Msa0369230 | Msa0738030 | 0.801210 | 1.002500e-48 | -8.615850e-47 |
| Msa0369230 | Msa0738240 | 0.813989 | 1.935492e-51 | -8.615850e-47 |
| Msa0369230 | Msa0743930 | 0.807615 | 4.636643e-50 | -8.615850e-47 |
| Msa0369230 | Msa0750810 | 0.801986 | 6.950487e-49 | -8.615850e-47 |
| Msa0369230 | Msa0751260 | 0.820001 | 8.636083e-53 | -8.615850e-47 |
| Msa0369230 | Msa0784480 | 0.803558 | 3.291238e-49 | -8.615850e-47 |
| Msa0369230 | Msa0795070 | 0.821734 | 3.449998e-53 | -8.615850e-47 |
| Msa0369230 | Msa0797770 | 0.811756 | 5.969639e-51 | -8.615850e-47 |
| Msa0369230 | Msa0822500 | 0.804102 | 2.538034e-49 | -8.615850e-47 |
| Msa0369230 | Msa0828240 | 0.816919 | 4.313193e-52 | -8.615850e-47 |
| Msa0369230 | Msa0833530 | 0.812166 | 4.860670e-51 | -8.615850e-47 |
| Msa0369230 | Msa0835230 | 0.805661 | 1.198325e-49 | -8.615850e-47 |
| Msa0369230 | Msa0855870 | 0.816189 | 6.285797e-52 | -8.615850e-47 |
| Msa0369230 | Msa0867870 | 0.801247 | 9.851258e-49 | -8.615850e-47 |
| Msa0369230 | Msa0871720 | 0.804635 | 1.965130e-49 | -8.615850e-47 |
| Msa0369230 | Msa0899970 | 0.824133 | 9.520225e-54 | -8.615850e-47 |
| Msa0369230 | Msa0902830 | 0.807410 | 5.124093e-50 | -8.615850e-47 |
| Msa0369230 | Msa0934140 | 0.808955 | 2.401677e-50 | -8.615850e-47 |
| Msa0369230 | Msa0936390 | 0.800766 | 1.235669e-48 | -8.615850e-47 |
| Msa0369230 | Msa0965080 | 0.827014 | 1.976275e-54 | -8.615850e-47 |
| Msa0369230 | Msa0965290 | 0.838630 | 2.565409e-57 | -8.615850e-47 |
| Msa0369230 | Msa0971650 | 0.812870 | 3.410703e-51 | -8.615850e-47 |
| Msa0369230 | Msa0999680 | 0.843671 | 1.214160e-58 | -8.615850e-47 |
| Msa0369230 | Msa1028280 | 0.815242 | 1.022242e-51 | -8.615850e-47 |
| Msa0369230 | Msa1034500 | 0.851204 | 1.033626e-60 | -8.615850e-47 |
| Msa0369230 | Msa1080960 | 0.808896 | 2.472672e-50 | -8.615850e-47 |
| Msa0369230 | Msa1088410 | 0.813723 | 2.215450e-51 | -8.615850e-47 |
| Msa0369230 | Msa1089450 | 0.828759 | 7.519321e-55 | -8.615850e-47 |
| Msa0369230 | Msa1111380 | 0.833100 | 6.472854e-56 | -8.615850e-47 |
| Msa0369230 | Msa1145810 | 0.821532 | 3.840905e-53 | -8.615850e-47 |
| Msa0369230 | Msa1170760 | 0.804306 | 2.301400e-49 | -8.615850e-47 |
| Msa0369230 | Msa1188180 | 0.815708 | 8.051378e-52 | -8.615850e-47 |
| Msa0369230 | Msa1189650 | 0.804261 | 2.351112e-49 | -8.615850e-47 |
| Msa0369230 | Msa1225860 | -0.807696 | 4.456204e-50 | -8.615850e-47 |
| Msa0369230 | Msa1243870 | 0.830121 | 3.509952e-55 | -8.615850e-47 |
| Msa0369230 | Msa1283740 | 0.821504 | 3.898151e-53 | -8.615850e-47 |
| Msa0369230 | Msa1284900 | 0.811987 | 5.317454e-51 | -8.615850e-47 |
| Msa0369230 | Msa1307560 | 0.802258 | 6.109040e-49 | -8.615850e-47 |
| Msa0369230 | Msa1340200 | 0.811430 | 7.029829e-51 | -8.615850e-47 |
| Msa0369230 | Msa1345810 | 0.821761 | 3.400383e-53 | -8.615850e-47 |
| Msa0369230 | Msa1358240 | 0.808812 | 2.577212e-50 | -8.615850e-47 |
| Msa0369230 | Msa1359560 | 0.802563 | 5.286832e-49 | -8.615850e-47 |
| Msa0369230 | Msa1371520 | 0.801351 | 9.380488e-49 | -8.615850e-47 |
| Msa0369230 | Msa1389880 | 0.805574 | 1.250299e-49 | -8.615850e-47 |
| Msa0369230 | Msa1403710 | 0.809322 | 2.003981e-50 | -8.615850e-47 |
| Msa0369230 | Msa1418240 | 0.817204 | 3.722852e-52 | -8.615850e-47 |
| Msa0369230 | Msa1430550 | 0.820819 | 5.607840e-53 | -8.615850e-47 |
| Msa0369230 | Msa1432130 | 0.810077 | 1.379231e-50 | -8.615850e-47 |
| Msa0369230 | Msa1444510 | 0.801326 | 9.490149e-49 | -8.615850e-47 |
| Msa0369230 | Msa1448560 | 0.819434 | 1.163661e-52 | -8.615850e-47 |
| Msa0369230 | Msa1452710 | 0.806679 | 7.316015e-50 | -8.615850e-47 |
| Msa0369230 | Msa1462360 | 0.801289 | 9.661384e-49 | -8.615850e-47 |
| Msa0369230 | Msa1463900 | 0.806724 | 7.158050e-50 | -8.615850e-47 |
| Msa0240900 | Msa0369230 | 0.824790 | 6.668095e-54 | -8.615850e-47 |
| Msa0241140 | Msa0369230 | 0.811412 | 7.090994e-51 | -8.615850e-47 |
| Msa0251710 | Msa0369230 | 0.801932 | 7.129471e-49 | -8.615850e-47 |
| Msa0264830 | Msa0369230 | 0.808138 | 3.587850e-50 | -8.615850e-47 |
| Msa0269560 | Msa0369230 | 0.814846 | 1.251385e-51 | -8.615850e-47 |
| Msa0274980 | Msa0369230 | 0.842452 | 2.563317e-58 | -8.615850e-47 |
| Msa0302570 | Msa0369230 | 0.806839 | 6.768353e-50 | -8.615850e-47 |
| Msa0302870 | Msa0369230 | 0.815775 | 7.778152e-52 | -8.615850e-47 |
| Msa0305840 | Msa0369230 | 0.800706 | 1.270657e-48 | -8.615850e-47 |
| Msa0315690 | Msa0369230 | 0.836452 | 9.280054e-57 | -8.615850e-47 |
| Msa0317970 | Msa0369230 | 0.827034 | 1.954379e-54 | -8.615850e-47 |
| Msa0340340 | Msa0369230 | 0.813710 | 2.229629e-51 | -8.615850e-47 |
| Msa0342010 | Msa0369230 | 0.839736 | 1.325793e-57 | -8.615850e-47 |
| Msa0358400 | Msa0369230 | 0.802427 | 5.639122e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369230 | MtrunA17_Chr3g0113471 | 91.115 | 619 | 29 | 1 | 1 | 619 | 1 | 593 | 0.0 | 1132 |
| Msa0369230 | MtrunA17_Chr3g0113521 | 81.613 | 620 | 85 | 3 | 1 | 619 | 1 | 592 | 0.0 | 1022 |
| Msa0369230 | MtrunA17_Chr5g0437041 | 55.520 | 625 | 232 | 10 | 7 | 614 | 12 | 607 | 0.0 | 670 |
| Msa0369230 | MtrunA17_Chr5g0430181 | 50.415 | 603 | 251 | 10 | 24 | 611 | 22 | 591 | 0.0 | 592 |
| Msa0369230 | MtrunA17_Chr5g0437061 | 58.286 | 525 | 161 | 8 | 113 | 613 | 1 | 491 | 0.0 | 591 |
| Msa0369230 | MtrunA17_Chr5g0437081 | 49.196 | 622 | 269 | 10 | 1 | 611 | 1 | 586 | 0.0 | 579 |
| Msa0369230 | MtrunA17_Chr3g0113531 | 47.826 | 621 | 281 | 9 | 2 | 613 | 6 | 592 | 0.0 | 551 |
| Msa0369230 | MtrunA17_Chr3g0112551 | 48.777 | 613 | 260 | 9 | 12 | 613 | 2 | 571 | 0.0 | 549 |
| Msa0369230 | MtrunA17_Chr5g0430191 | 44.463 | 614 | 276 | 14 | 3 | 611 | 17 | 570 | 7.94e-166 | 485 |
| Msa0369230 | MtrunA17_Chr5g0437051 | 42.857 | 91 | 48 | 1 | 23 | 109 | 18 | 108 | 1.21e-17 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369230 | AT2G40116.1 | 50.079 | 629 | 258 | 11 | 7 | 614 | 20 | 613 | 0.0 | 603 |
| Msa0369230 | AT5G58690.3 | 48.505 | 602 | 270 | 6 | 13 | 613 | 15 | 577 | 0.0 | 565 |
| Msa0369230 | AT5G58690.1 | 48.505 | 602 | 270 | 6 | 13 | 613 | 15 | 577 | 0.0 | 565 |
| Msa0369230 | AT5G58690.2 | 48.744 | 597 | 266 | 6 | 18 | 613 | 1 | 558 | 0.0 | 564 |
| Msa0369230 | AT3G08510.2 | 49.023 | 614 | 270 | 11 | 1 | 609 | 1 | 576 | 0.0 | 562 |
| Msa0369230 | AT3G08510.1 | 49.023 | 614 | 270 | 11 | 1 | 609 | 1 | 576 | 0.0 | 562 |
| Msa0369230 | AT5G58700.3 | 47.565 | 616 | 284 | 7 | 7 | 613 | 11 | 596 | 0.0 | 558 |
| Msa0369230 | AT5G58700.1 | 47.565 | 616 | 284 | 7 | 7 | 613 | 11 | 596 | 0.0 | 558 |
| Msa0369230 | AT3G55940.1 | 47.588 | 622 | 270 | 12 | 1 | 609 | 1 | 579 | 0.0 | 553 |
| Msa0369230 | AT5G58700.2 | 51.167 | 514 | 213 | 6 | 109 | 613 | 4 | 488 | 2.83e-177 | 512 |
| Msa0369230 | AT3G08510.4 | 45.928 | 614 | 260 | 12 | 1 | 609 | 1 | 547 | 1.31e-172 | 502 |
| Msa0369230 | AT3G08510.3 | 45.928 | 614 | 260 | 12 | 1 | 609 | 1 | 547 | 1.31e-172 | 502 |
| Msa0369230 | AT5G58670.1 | 45.617 | 616 | 273 | 11 | 3 | 614 | 2 | 559 | 1.14e-171 | 500 |
| Msa0369230 | AT4G38530.1 | 44.137 | 614 | 278 | 13 | 6 | 614 | 5 | 558 | 1.34e-168 | 493 |
| Msa0369230 | AT3G47290.1 | 39.015 | 528 | 239 | 11 | 87 | 611 | 81 | 528 | 5.48e-107 | 333 |
| Msa0369230 | AT3G47290.2 | 38.447 | 515 | 234 | 10 | 87 | 598 | 81 | 515 | 4.01e-103 | 324 |
| Msa0369230 | AT3G47220.1 | 38.086 | 533 | 236 | 16 | 87 | 611 | 82 | 528 | 2.71e-95 | 303 |
Find 132 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTAATTGAACTTGATTTA+TGG | 0.148872 | 3_1:+66322278 | Msa0369230:CDS |
| TGGACAATTGGTATCCTATT+TGG | 0.164917 | 3_1:+66324460 | Msa0369230:CDS |
| AGAACAAAATTGCACCTTAT+TGG | 0.178097 | 3_1:+66320558 | Msa0369230:CDS |
| AAAGAGTAAGAAAATGATTT+TGG | 0.191904 | 3_1:-66320266 | None:intergenic |
| TGTGACAAGTTCATTTATTT+TGG | 0.210909 | 3_1:+66324755 | Msa0369230:three_prime_UTR |
| TGTTTCAAAGCCTCTATAAT+TGG | 0.221396 | 3_1:-66322247 | None:intergenic |
| AGTGCATACCTCATCCTTTA+AGG | 0.223441 | 3_1:-66320704 | None:intergenic |
| CTCCTTTAGGATAAATTCTT+AGG | 0.242663 | 3_1:-66323515 | None:intergenic |
| CAGATGGCAAATAAAATATT+TGG | 0.245584 | 3_1:+66322863 | Msa0369230:intron |
| GTGAATCCGATTCCCATATT+TGG | 0.253107 | 3_1:-66324722 | None:intergenic |
| TGATTTCAATGGTCCCTTAA+AGG | 0.259016 | 3_1:+66320690 | Msa0369230:CDS |
| GATTGAACACGTTCTCCTTT+AGG | 0.264859 | 3_1:-66323528 | None:intergenic |
| AGACGTCGTTCATCCAAATA+TGG | 0.269481 | 3_1:+66324709 | Msa0369230:exon |
| AAATTGCACCTTATTGGATT+TGG | 0.270742 | 3_1:+66320564 | Msa0369230:CDS |
| ATTTCTTGAATTAGAAATTC+AGG | 0.279667 | 3_1:-66324076 | None:intergenic |
| GTGTGACAGGTTTGTATTGC+TGG | 0.315703 | 3_1:+66324396 | Msa0369230:intron |
| CTCATGGAGCCGACCTAATT+AGG | 0.322220 | 3_1:+66323382 | Msa0369230:CDS |
| GTTCTATGGCAGAAAGTAAA+TGG | 0.329143 | 3_1:+66323171 | Msa0369230:intron |
| AAACATTTGGTTAGTGCAAC+TGG | 0.337432 | 3_1:-66322459 | None:intergenic |
| AGTTTGATAGGTACCTAATT+AGG | 0.337781 | 3_1:-66323395 | None:intergenic |
| AGAACCACCTTTAGATCTTA+AGG | 0.339714 | 3_1:+66320456 | Msa0369230:CDS |
| TCAGTTTGAGGATGCTCCTT+TGG | 0.341714 | 3_1:-66322977 | None:intergenic |
| GGACACAATTCCTACCTTAC+TGG | 0.347434 | 3_1:+66322193 | Msa0369230:CDS |
| TCGAACTCTTCGTCCCAAAT+AGG | 0.347640 | 3_1:-66324474 | None:intergenic |
| GGACAATTGGTATCCTATTT+GGG | 0.357053 | 3_1:+66324461 | Msa0369230:CDS |
| TCACATTATTTCATGTATAC+AGG | 0.373381 | 3_1:+66322172 | Msa0369230:CDS |
| ATCCGGAGCAACGCGAGCTC+TGG | 0.380866 | 3_1:-66324513 | None:intergenic |
| AATGAAACTAGCAGTATTGC+AGG | 0.384072 | 3_1:+66320628 | Msa0369230:CDS |
| GCAAAGTTATCCTGAAGTTT+TGG | 0.384127 | 3_1:-66322555 | None:intergenic |
| TCCATTTGACACATGATTGT+TGG | 0.385768 | 3_1:-66323005 | None:intergenic |
| TGTATTCACGTGCACCTTGC+TGG | 0.389565 | 3_1:-66323236 | None:intergenic |
| CAGAGCTAAGACATGGATTT+CGG | 0.389763 | 3_1:+66324598 | Msa0369230:CDS |
| AGTTGCACTAACCAAATGTT+TGG | 0.392870 | 3_1:+66322461 | Msa0369230:CDS |
| CCACCTAACACCAAAACTTC+AGG | 0.394243 | 3_1:+66322545 | Msa0369230:CDS |
| TATAAACTCTCTTCCACAAA+AGG | 0.407161 | 3_1:+66320302 | Msa0369230:five_prime_UTR |
| ATTGCAGGTACATCATGATA+TGG | 0.407698 | 3_1:+66322138 | Msa0369230:intron |
| GATTGGCTCCAAATCCAATA+AGG | 0.408541 | 3_1:-66320572 | None:intergenic |
| CAGTATTGCAGGACTCAGTT+TGG | 0.408717 | 3_1:+66320639 | Msa0369230:CDS |
| ACAGGAACAACAAGATTCTA+TGG | 0.416912 | 3_1:+66323057 | Msa0369230:CDS |
| TAAATGTGGCCTAAAATTTG+TGG | 0.417479 | 3_1:-66323550 | None:intergenic |
| CTAACCTTTGTGTAAAAGTC+TGG | 0.418095 | 3_1:-66324308 | None:intergenic |
| TGAACATCCCTTGCATCAAC+CGG | 0.429950 | 3_1:-66324021 | None:intergenic |
| AAAGATAGACTAAAAGTTGA+TGG | 0.432276 | 3_1:+66323303 | Msa0369230:CDS |
| CAACAGGTAAAAGTATATAA+AGG | 0.432650 | 3_1:+66324233 | Msa0369230:intron |
| ACAATGTATTTAAAGTTTCA+AGG | 0.432965 | 3_1:-66324686 | None:intergenic |
| TTCCAGAGCTCGCGTTGCTC+CGG | 0.434663 | 3_1:+66324511 | Msa0369230:CDS |
| TTGATGGTGGTAAAGTTAGA+AGG | 0.435066 | 3_1:+66323319 | Msa0369230:CDS |
| CAATGCTTATCTAACTAGAT+AGG | 0.435098 | 3_1:-66322784 | None:intergenic |
| GGTGGTATTAAAGTAGTTCA+TGG | 0.435995 | 3_1:+66322319 | Msa0369230:CDS |
| CTGCTTCTAGATGATTTCAA+TGG | 0.441202 | 3_1:+66320679 | Msa0369230:CDS |
| ACATAGAACAACACTTTCAT+AGG | 0.443060 | 3_1:+66320227 | Msa0369230:five_prime_UTR |
| CGAGCTCTGGAACAGTCAAT+TGG | 0.444259 | 3_1:-66324500 | None:intergenic |
| CGAAGTGAAAGATAAAGATA+AGG | 0.444805 | 3_1:+66324536 | Msa0369230:CDS |
| GGATCAACTACTTAGATTCA+TGG | 0.446194 | 3_1:+66320522 | Msa0369230:CDS |
| TAGTAAATTGATTTCCAGTA+AGG | 0.448160 | 3_1:-66322207 | None:intergenic |
| CAAGTGTAAAGATGGACAAT+TGG | 0.450323 | 3_1:+66324448 | Msa0369230:CDS |
| TCAAGAAATTGTACATAATG+AGG | 0.452705 | 3_1:+66324090 | Msa0369230:CDS |
| CCATGTCTTAGCTCTGATAC+AGG | 0.454126 | 3_1:-66324591 | None:intergenic |
| TTTGGAGCCAATCATTGAAA+AGG | 0.458273 | 3_1:+66320582 | Msa0369230:CDS |
| CTTTATCTTTCACTTCGATC+CGG | 0.459942 | 3_1:-66324530 | None:intergenic |
| TCTTCTAAAGTTAGAATCAC+TGG | 0.460622 | 3_1:-66322522 | None:intergenic |
| GTTTGAGGATGCTCCTTTGG+TGG | 0.464803 | 3_1:-66322974 | None:intergenic |
| CCACATTTAGGGTGGATGTA+TGG | 0.468165 | 3_1:+66323564 | Msa0369230:CDS |
| GTGCATACCTCATCCTTTAA+GGG | 0.469745 | 3_1:-66320703 | None:intergenic |
| CCACCATCTTTAGTTGAAGA+TGG | 0.471280 | 3_1:-66322301 | None:intergenic |
| TGGCCATCTTCAACTAAAGA+TGG | 0.471964 | 3_1:+66322298 | Msa0369230:CDS |
| ATCCTAAGAATTTATCCTAA+AGG | 0.472397 | 3_1:+66323513 | Msa0369230:CDS |
| GAAGAAAACAAGTGTAAAGA+TGG | 0.472423 | 3_1:+66324440 | Msa0369230:CDS |
| GAAGTGAAAGATAAAGATAA+GGG | 0.476695 | 3_1:+66324537 | Msa0369230:CDS |
| GATGGTTGCATTCAATATGC+AGG | 0.480468 | 3_1:+66323593 | Msa0369230:CDS |
| GAAAGTAAATGGTGAAGAGA+TGG | 0.484846 | 3_1:+66323182 | Msa0369230:intron |
| AAAGATTCCTTAAGATCTAA+AGG | 0.489446 | 3_1:-66320463 | None:intergenic |
| GCCAACAATCATGTGTCAAA+TGG | 0.498994 | 3_1:+66323004 | Msa0369230:CDS |
| CAATGGTCCCTTAAAGGATG+AGG | 0.514587 | 3_1:+66320696 | Msa0369230:CDS |
| GTTCATCCAAATATGGGAAT+CGG | 0.518589 | 3_1:+66324716 | Msa0369230:three_prime_UTR |
| TGTTGCTTTGTGTGACAGAA+AGG | 0.520816 | 3_1:+66324623 | Msa0369230:CDS |
| AAACATTTGATTACAATCCA+TGG | 0.524741 | 3_1:+66323258 | Msa0369230:CDS |
| GACGTCGTTCATCCAAATAT+GGG | 0.525484 | 3_1:+66324710 | Msa0369230:exon |
| AAATCTGCTTCTGAGTCTCA+TGG | 0.528727 | 3_1:+66323366 | Msa0369230:CDS |
| CAGGTTTGTATTGCTGGAGT+GGG | 0.531989 | 3_1:+66324402 | Msa0369230:intron |
| CAGTGATAAACCAATTATAG+AGG | 0.533232 | 3_1:+66322237 | Msa0369230:CDS |
| GTAAAAGTATATAAAGGAGT+TGG | 0.544857 | 3_1:+66324239 | Msa0369230:CDS |
| TGGTGAAAATTACATGTCAA+AGG | 0.547867 | 3_1:+66320501 | Msa0369230:CDS |
| CAAGGGATGTTCAAAGCGAA+TGG | 0.550048 | 3_1:+66324031 | Msa0369230:CDS |
| TTGTTGGCACCATCAGTTTG+AGG | 0.553822 | 3_1:-66322989 | None:intergenic |
| AAGTATATAAAGGAGTTGGT+TGG | 0.554621 | 3_1:+66324243 | Msa0369230:CDS |
| AAATCACTCCGGTTGATGCA+AGG | 0.554660 | 3_1:+66324013 | Msa0369230:CDS |
| TTGAAGATATGCATATTGTC+CGG | 0.556239 | 3_1:-66322727 | None:intergenic |
| ATTATAGAGGCTTTGAAACA+AGG | 0.556418 | 3_1:+66322250 | Msa0369230:CDS |
| CCTGTATCAGAGCTAAGACA+TGG | 0.557267 | 3_1:+66324591 | Msa0369230:CDS |
| TGAAGATGAAACATGGGGAC+AGG | 0.561303 | 3_1:+66323039 | Msa0369230:CDS |
| ATCTGCTGAAGGTATAATGT+TGG | 0.561315 | 3_1:+66324812 | Msa0369230:three_prime_UTR |
| AATCACTCCGGTTGATGCAA+GGG | 0.562532 | 3_1:+66324014 | Msa0369230:CDS |
| ATAAACTCTCTTCCACAAAA+GGG | 0.564431 | 3_1:+66320303 | Msa0369230:five_prime_UTR |
| TATGAAAGTGTTGTTCTATG+TGG | 0.569005 | 3_1:-66320225 | None:intergenic |
| ACAGGTTTGTATTGCTGGAG+TGG | 0.572958 | 3_1:+66324401 | Msa0369230:intron |
| AAATTGATTTCCAGTAAGGT+AGG | 0.573386 | 3_1:-66322203 | None:intergenic |
| TTTGTTATACAATCTGTCGT+AGG | 0.575685 | 3_1:-66322902 | None:intergenic |
| ATTTAAAGATAATCTGCTGA+AGG | 0.582512 | 3_1:+66324801 | Msa0369230:three_prime_UTR |
| ACCTTTGTGTAAAAGTCTGG+TGG | 0.590211 | 3_1:-66324305 | None:intergenic |
| GGATGTTCAAAGCGAATGGA+GGG | 0.590594 | 3_1:+66324035 | Msa0369230:CDS |
| TTCAAAGCGAATGGAGGGTG+CGG | 0.590959 | 3_1:+66324040 | Msa0369230:CDS |
| TACATGAAATAATGTGACAA+GGG | 0.596814 | 3_1:-66322166 | None:intergenic |
| AGGGGCATGGCAAATCACTC+CGG | 0.598085 | 3_1:+66324002 | Msa0369230:intron |
| TATATCAACTAAACCACCAA+AGG | 0.600524 | 3_1:+66322961 | Msa0369230:CDS |
| AATCGTCTGAAGATGAAACA+TGG | 0.601806 | 3_1:+66323032 | Msa0369230:CDS |
| TTATCTAACTAGATAGGAGA+TGG | 0.603242 | 3_1:-66322778 | None:intergenic |
| GGGATGTTCAAAGCGAATGG+AGG | 0.604762 | 3_1:+66324034 | Msa0369230:CDS |
| TTTCAGACACCATCACGTGC+CGG | 0.605791 | 3_1:+66322708 | Msa0369230:intron |
| GATAGACTAAAAGTTGATGG+TGG | 0.608816 | 3_1:+66323306 | Msa0369230:CDS |
| GTGGATGTATGGAGCTCAGA+TGG | 0.609593 | 3_1:+66323575 | Msa0369230:CDS |
| TATATTTATGCATGAGATCG+AGG | 0.610657 | 3_1:-66320170 | None:intergenic |
| TAAACTGAAAACTGAGGACA+TGG | 0.614826 | 3_1:+66323081 | Msa0369230:CDS |
| CCATACATCCACCCTAAATG+TGG | 0.621111 | 3_1:-66323564 | None:intergenic |
| ATCCATGGTGGAAAATCAGA+AGG | 0.621784 | 3_1:+66323273 | Msa0369230:CDS |
| GCATATTGTCCGGCACGTGA+TGG | 0.621968 | 3_1:-66322717 | None:intergenic |
| ATCGTCTGAAGATGAAACAT+GGG | 0.625646 | 3_1:+66323033 | Msa0369230:CDS |
| TATTTGCTCATTCAAAACAG+AGG | 0.626026 | 3_1:+66320336 | Msa0369230:five_prime_UTR |
| TGATAGGTACCTAATTAGGT+CGG | 0.627187 | 3_1:-66323391 | None:intergenic |
| GTTGCTTTGTGTGACAGAAA+GGG | 0.634451 | 3_1:+66324624 | Msa0369230:CDS |
| AAGGAGCATCCTCAAACTGA+TGG | 0.641373 | 3_1:+66322980 | Msa0369230:CDS |
| CCATCTTCAACTAAAGATGG+TGG | 0.646507 | 3_1:+66322301 | Msa0369230:CDS |
| ATGTATTTAAAGTTTCAAGG+TGG | 0.653263 | 3_1:-66324683 | None:intergenic |
| CATTTGATTACAATCCATGG+TGG | 0.665611 | 3_1:+66323261 | Msa0369230:CDS |
| TTTGGTTAGTGCAACTGGAG+TGG | 0.667170 | 3_1:-66322454 | None:intergenic |
| ATACATGAAATAATGTGACA+AGG | 0.675745 | 3_1:-66322167 | None:intergenic |
| GATTCCTTAAGATCTAAAGG+TGG | 0.677642 | 3_1:-66320460 | None:intergenic |
| TTCAAAACAGAGGAAAACAG+AGG | 0.677844 | 3_1:+66320346 | Msa0369230:five_prime_UTR |
| TATTACAAATCAAACCAGCA+AGG | 0.677933 | 3_1:+66323222 | Msa0369230:CDS |
| TATGGCTAAACTGAAAACTG+AGG | 0.685214 | 3_1:+66323075 | Msa0369230:CDS |
| TCAACTACTTAGATTCATGG+TGG | 0.694803 | 3_1:+66320525 | Msa0369230:CDS |
| TCGTCTGAAGATGAAACATG+GGG | 0.715707 | 3_1:+66323034 | Msa0369230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTATGAAAAAAAATTATTT+TGG | - | chr3_1:66321594-66321613 | None:intergenic | 10.0% |
| !!! | TTTTTTTTATTTTTTATGAC+AGG | + | chr3_1:66323982-66324001 | Msa0369230:intron | 10.0% |
| !!! | TTTTTTTATTTTTTATGACA+GGG | + | chr3_1:66323983-66324002 | Msa0369230:intron | 10.0% |
| !!! | TATATATTTTTATGCTAATG+TGG | + | chr3_1:66320737-66320756 | Msa0369230:intron | 15.0% |
| !!! | ACAGTTAGTATATATTTTTA+AGG | + | chr3_1:66320884-66320903 | Msa0369230:intron | 15.0% |
| !!! | GCAAAAATTTTAAAATTGTT+AGG | + | chr3_1:66321644-66321663 | Msa0369230:intron | 15.0% |
| !!! | AAATTTTAAAATTGTTAGGT+CGG | + | chr3_1:66321648-66321667 | Msa0369230:intron | 15.0% |
| !!! | TTTTTTTTAGATAGATGAAA+TGG | - | chr3_1:66321739-66321758 | None:intergenic | 15.0% |
| !!! | AAAATGAGATGATTTTTATT+CGG | + | chr3_1:66321921-66321940 | Msa0369230:intron | 15.0% |
| !! | GTATTATTTAATCTAATCAA+AGG | - | chr3_1:66321974-66321993 | None:intergenic | 15.0% |
| !!! | ATTTTTTCATATTATTAGTC+AGG | - | chr3_1:66322107-66322126 | None:intergenic | 15.0% |
| !! | TGATGGTTAATAATATAAAA+TGG | + | chr3_1:66323733-66323752 | Msa0369230:intron | 15.0% |
| !!! | AATATCACTATTGTTTTAAA+AGG | - | chr3_1:66323854-66323873 | None:intergenic | 15.0% |
| !!! | TTTTTTATTTTTTATGACAG+GGG | + | chr3_1:66323984-66324003 | Msa0369230:intron | 15.0% |
| !!! | TCTTTTAGTAAATTGATTAA+AGG | - | chr3_1:66324169-66324188 | None:intergenic | 15.0% |
| !!! | AAAATGATTTTGGTTTTCAA+TGG | - | chr3_1:66320259-66320278 | None:intergenic | 20.0% |
| !!! | AAAGAGTAAGAAAATGATTT+TGG | - | chr3_1:66320269-66320288 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTCATTCTCAATT+TGG | - | chr3_1:66320386-66320405 | None:intergenic | 20.0% |
| !!! | TAACATGACCTATATTTTTA+TGG | + | chr3_1:66321059-66321078 | Msa0369230:intron | 20.0% |
| !!! | AACATGACCTATATTTTTAT+GGG | + | chr3_1:66321060-66321079 | Msa0369230:intron | 20.0% |
| !! | TTAGAGAATATTTCTTCTTT+GGG | - | chr3_1:66321125-66321144 | None:intergenic | 20.0% |
| !! | TTTAGAGAATATTTCTTCTT+TGG | - | chr3_1:66321126-66321145 | None:intergenic | 20.0% |
| !! | CAATAGTAGAAATAGATTAT+TGG | - | chr3_1:66321203-66321222 | None:intergenic | 20.0% |
| !! | AGATTTGGCAAATAAAAATA+GGG | - | chr3_1:66321264-66321283 | None:intergenic | 20.0% |
| !!! | TAGCCAAACATTTTATTATT+TGG | + | chr3_1:66321324-66321343 | Msa0369230:intron | 20.0% |
| !! | GTTCCAAATAATAAAATGTT+TGG | - | chr3_1:66321330-66321349 | None:intergenic | 20.0% |
| !! | TAATACTATAAACAAAGAAG+TGG | - | chr3_1:66321382-66321401 | None:intergenic | 20.0% |
| !! | TTCATAACAAAAAAACTAAG+AGG | + | chr3_1:66321606-66321625 | Msa0369230:intron | 20.0% |
| !!! | CTTTATTTCAATAAAACTCT+TGG | - | chr3_1:66321765-66321784 | None:intergenic | 20.0% |
| !!! | ATACACTTAGAATTTTCATT+GGG | - | chr3_1:66321868-66321887 | None:intergenic | 20.0% |
| !! | ATTCAATCACTTCTATTTAT+AGG | - | chr3_1:66322672-66322691 | None:intergenic | 20.0% |
| !!! | AGAAAAAATGATGATGAATA+TGG | - | chr3_1:66322836-66322855 | None:intergenic | 20.0% |
| !!! | AATTGTGTTTTTGGTATATT+TGG | + | chr3_1:66323620-66323639 | Msa0369230:intron | 20.0% |
| !!! | AATTACGTTCATTAATTTGA+TGG | + | chr3_1:66323716-66323735 | Msa0369230:intron | 20.0% |
| !! | ATTTCTTGAATTAGAAATTC+AGG | - | chr3_1:66324079-66324098 | None:intergenic | 20.0% |
| !!! | ACATTTTGCAAAAATTCATT+TGG | + | chr3_1:66324358-66324377 | Msa0369230:intron | 20.0% |
| !!! | ACAATGTATTTAAAGTTTCA+AGG | - | chr3_1:66324689-66324708 | None:intergenic | 20.0% |
| ! | TGGAAAAAAAAAATGTAGTC+AGG | - | chr3_1:66320078-66320097 | None:intergenic | 25.0% |
| !! | GTTTTCTTTTTCTTTTCTAG+AGG | - | chr3_1:66320110-66320129 | None:intergenic | 25.0% |
| !! | TTAAGCTTTTTGACCAAAAA+AGG | + | chr3_1:66320418-66320437 | Msa0369230:CDS | 25.0% |
| !!! | CTTATTCACTTTACCTTTTT+TGG | - | chr3_1:66320434-66320453 | None:intergenic | 25.0% |
| ! | CAAAAAAGGTAAAGTGAATA+AGG | + | chr3_1:66320432-66320451 | Msa0369230:CDS | 25.0% |
| ! | AAAGATTCCTTAAGATCTAA+AGG | - | chr3_1:66320466-66320485 | None:intergenic | 25.0% |
| !! | TTCAAAACCTTTTCAATGAT+TGG | - | chr3_1:66320592-66320611 | None:intergenic | 25.0% |
| ! | TTAATAAAAAACGAGCAATG+TGG | + | chr3_1:66320851-66320870 | Msa0369230:intron | 25.0% |
| !!! | ACTCATTAACTTGTGTTTTA+AGG | - | chr3_1:66320925-66320944 | None:intergenic | 25.0% |
| ! | AATTGAATACGCAAGTATTA+AGG | + | chr3_1:66321001-66321020 | Msa0369230:intron | 25.0% |
| ! | ATTGAATACGCAAGTATTAA+GGG | + | chr3_1:66321002-66321021 | Msa0369230:intron | 25.0% |
| ! | ATCACTACCCATAAAAATAT+AGG | - | chr3_1:66321070-66321089 | None:intergenic | 25.0% |
| ! | TAGAGAATATTTCTTCTTTG+GGG | - | chr3_1:66321124-66321143 | None:intergenic | 25.0% |
| !!! | AAATGTTAATTTGTCCCTTA+AGG | - | chr3_1:66321241-66321260 | None:intergenic | 25.0% |
| ! | CAGATTTGGCAAATAAAAAT+AGG | - | chr3_1:66321265-66321284 | None:intergenic | 25.0% |
| ! | GTAAATTAACACATACAAAG+TGG | - | chr3_1:66321706-66321725 | None:intergenic | 25.0% |
| !! | TACACTTAGAATTTTCATTG+GGG | - | chr3_1:66321867-66321886 | None:intergenic | 25.0% |
| !! | CATACACTTAGAATTTTCAT+TGG | - | chr3_1:66321869-66321888 | None:intergenic | 25.0% |
| ! | AAATTTATGTATCTCATTGC+AGG | + | chr3_1:66322123-66322142 | Msa0369230:intron | 25.0% |
| ! | TACATGAAATAATGTGACAA+GGG | - | chr3_1:66322169-66322188 | None:intergenic | 25.0% |
| ! | ATACATGAAATAATGTGACA+AGG | - | chr3_1:66322170-66322189 | None:intergenic | 25.0% |
| ! | TCACATTATTTCATGTATAC+AGG | + | chr3_1:66322172-66322191 | Msa0369230:CDS | 25.0% |
| !! | TAGTAAATTGATTTCCAGTA+AGG | - | chr3_1:66322210-66322229 | None:intergenic | 25.0% |
| ! | GAGTAATTGAACTTGATTTA+TGG | + | chr3_1:66322278-66322297 | Msa0369230:CDS | 25.0% |
| !! | GATTGTTTTCTTGAATCTTA+TGG | + | chr3_1:66322399-66322418 | Msa0369230:intron | 25.0% |
| !! | GACAAATGCATATTCTTTTA+TGG | - | chr3_1:66322490-66322509 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTATTCATGCAGA+TGG | + | chr3_1:66322847-66322866 | Msa0369230:intron | 25.0% |
| ! | CAGATGGCAAATAAAATATT+TGG | + | chr3_1:66322863-66322882 | Msa0369230:intron | 25.0% |
| !!! | TTTTCTGAAAAGTGAAATGA+TGG | - | chr3_1:66323129-66323148 | None:intergenic | 25.0% |
| ! | AAACATTTGATTACAATCCA+TGG | + | chr3_1:66323258-66323277 | Msa0369230:CDS | 25.0% |
| ! | AAAGATAGACTAAAAGTTGA+TGG | + | chr3_1:66323303-66323322 | Msa0369230:CDS | 25.0% |
| ! | AATCTTCATGTAAGTTTGAT+AGG | - | chr3_1:66323410-66323429 | None:intergenic | 25.0% |
| !! | CATACATAGTTATGTTTTTC+AGG | + | chr3_1:66323475-66323494 | Msa0369230:intron | 25.0% |
| ! | ATCCTAAGAATTTATCCTAA+AGG | + | chr3_1:66323513-66323532 | Msa0369230:CDS | 25.0% |
| !! | AATCATGGTTAATTAGGTTT+TGG | - | chr3_1:66323782-66323801 | None:intergenic | 25.0% |
| ! | CTTGAAAATCATGGTTAATT+AGG | - | chr3_1:66323788-66323807 | None:intergenic | 25.0% |
| !!! | GTTTTAAAAGGTTCTCTAAT+AGG | - | chr3_1:66323842-66323861 | None:intergenic | 25.0% |
| ! | AGGTTTAAAAGAAATGTATG+TGG | - | chr3_1:66323937-66323956 | None:intergenic | 25.0% |
| !! | TTAAACCTTGTTGTCATATT+AGG | + | chr3_1:66323949-66323968 | Msa0369230:intron | 25.0% |
| ! | TAATTCCTAATATGACAACA+AGG | - | chr3_1:66323957-66323976 | None:intergenic | 25.0% |
| ! | TCAAGAAATTGTACATAATG+AGG | + | chr3_1:66324090-66324109 | Msa0369230:CDS | 25.0% |
| !! | TATTTTTCATGTTCAACAAC+AGG | + | chr3_1:66324217-66324236 | Msa0369230:intron | 25.0% |
| !! | CAACAGGTAAAAGTATATAA+AGG | + | chr3_1:66324233-66324252 | Msa0369230:intron | 25.0% |
| !! | GTAAAAGTATATAAAGGAGT+TGG | + | chr3_1:66324239-66324258 | Msa0369230:CDS | 25.0% |
| !! | ATGAATTTTTGCAAAATGTG+TGG | - | chr3_1:66324357-66324376 | None:intergenic | 25.0% |
| ! | GAAGTGAAAGATAAAGATAA+GGG | + | chr3_1:66324537-66324556 | Msa0369230:CDS | 25.0% |
| !! | ATGTATTTAAAGTTTCAAGG+TGG | - | chr3_1:66324686-66324705 | None:intergenic | 25.0% |
| !! | TGTGACAAGTTCATTTATTT+TGG | + | chr3_1:66324755-66324774 | Msa0369230:three_prime_UTR | 25.0% |
| ! | ATTTAAAGATAATCTGCTGA+AGG | + | chr3_1:66324801-66324820 | Msa0369230:three_prime_UTR | 25.0% |
| !! | CTTTTTCTTTTCTAGAGGTT+AGG | - | chr3_1:66320105-66320124 | None:intergenic | 30.0% |
| TATATTTATGCATGAGATCG+AGG | - | chr3_1:66320173-66320192 | None:intergenic | 30.0% | |
| !! | TATGAAAGTGTTGTTCTATG+TGG | - | chr3_1:66320228-66320247 | None:intergenic | 30.0% |
| ACATAGAACAACACTTTCAT+AGG | + | chr3_1:66320227-66320246 | Msa0369230:five_prime_UTR | 30.0% | |
| TATAAACTCTCTTCCACAAA+AGG | + | chr3_1:66320302-66320321 | Msa0369230:five_prime_UTR | 30.0% | |
| ATAAACTCTCTTCCACAAAA+GGG | + | chr3_1:66320303-66320322 | Msa0369230:five_prime_UTR | 30.0% | |
| TATTTGCTCATTCAAAACAG+AGG | + | chr3_1:66320336-66320355 | Msa0369230:five_prime_UTR | 30.0% | |
| ! | TCTTTTTCCAAGTTTGCAAA+TGG | + | chr3_1:66320481-66320500 | Msa0369230:CDS | 30.0% |
| ! | ATTTTCACCATTTGCAAACT+TGG | - | chr3_1:66320491-66320510 | None:intergenic | 30.0% |
| TGGTGAAAATTACATGTCAA+AGG | + | chr3_1:66320501-66320520 | Msa0369230:CDS | 30.0% | |
| AGAACAAAATTGCACCTTAT+TGG | + | chr3_1:66320558-66320577 | Msa0369230:CDS | 30.0% | |
| AAATTGCACCTTATTGGATT+TGG | + | chr3_1:66320564-66320583 | Msa0369230:CDS | 30.0% | |
| !!! | CATTGAAAAGGTTTTGAAAG+TGG | + | chr3_1:66320594-66320613 | Msa0369230:CDS | 30.0% |
| ATATACTAACTGTAAAGTGC+AGG | - | chr3_1:66320877-66320896 | None:intergenic | 30.0% | |
| !! | ATTCATTAACTTGTGCCTTA+AGG | + | chr3_1:66321223-66321242 | Msa0369230:intron | 30.0% |
| !! | TTCATTAACTTGTGCCTTAA+GGG | + | chr3_1:66321224-66321243 | Msa0369230:intron | 30.0% |
| ACTAGAAACTCAACATTCAT+TGG | + | chr3_1:66321301-66321320 | Msa0369230:intron | 30.0% | |
| AATTAACACATACAAAGTGG+AGG | - | chr3_1:66321703-66321722 | None:intergenic | 30.0% | |
| ! | ACACTTAGAATTTTCATTGG+GGG | - | chr3_1:66321866-66321885 | None:intergenic | 30.0% |
| ! | AAATTGATTTCCAGTAAGGT+AGG | - | chr3_1:66322206-66322225 | None:intergenic | 30.0% |
| CAGTGATAAACCAATTATAG+AGG | + | chr3_1:66322237-66322256 | Msa0369230:CDS | 30.0% | |
| TGTTTCAAAGCCTCTATAAT+TGG | - | chr3_1:66322250-66322269 | None:intergenic | 30.0% | |
| !! | ATTATAGAGGCTTTGAAACA+AGG | + | chr3_1:66322250-66322269 | Msa0369230:CDS | 30.0% |
| ! | GGTGCATTATATTTTTCTAG+TGG | - | chr3_1:66322367-66322386 | None:intergenic | 30.0% |
| AATATAATGCACCATAGAGT+TGG | + | chr3_1:66322374-66322393 | Msa0369230:intron | 30.0% | |
| AAAACAATCATCCAACTCTA+TGG | - | chr3_1:66322388-66322407 | None:intergenic | 30.0% | |
| TTACTTCTTGAAATCAATGC+AGG | + | chr3_1:66322424-66322443 | Msa0369230:intron | 30.0% | |
| ! | TTTTATGGCTTCCAAACATT+TGG | - | chr3_1:66322475-66322494 | None:intergenic | 30.0% |
| !! | TCTTCTAAAGTTAGAATCAC+TGG | - | chr3_1:66322525-66322544 | None:intergenic | 30.0% |
| TTGAAGATATGCATATTGTC+CGG | - | chr3_1:66322730-66322749 | None:intergenic | 30.0% | |
| TTATCTAACTAGATAGGAGA+TGG | - | chr3_1:66322781-66322800 | None:intergenic | 30.0% | |
| CAATGCTTATCTAACTAGAT+AGG | - | chr3_1:66322787-66322806 | None:intergenic | 30.0% | |
| GGAATAGCAAAATAGTCATA+AGG | - | chr3_1:66322815-66322834 | None:intergenic | 30.0% | |
| ! | TTTGTTATACAATCTGTCGT+AGG | - | chr3_1:66322905-66322924 | None:intergenic | 30.0% |
| ACCAGCATCACTAAAAAATA+TGG | + | chr3_1:66322934-66322953 | Msa0369230:CDS | 30.0% | |
| !!! | ACCATATTTTTTAGTGATGC+TGG | - | chr3_1:66322938-66322957 | None:intergenic | 30.0% |
| TATATCAACTAAACCACCAA+AGG | + | chr3_1:66322961-66322980 | Msa0369230:CDS | 30.0% | |
| AATCTGAATCATCTGTTCTA+TGG | + | chr3_1:66323157-66323176 | Msa0369230:intron | 30.0% | |
| TATTACAAATCAAACCAGCA+AGG | + | chr3_1:66323222-66323241 | Msa0369230:CDS | 30.0% | |
| AGTTTGATAGGTACCTAATT+AGG | - | chr3_1:66323398-66323417 | None:intergenic | 30.0% | |
| GCTGAATTAAACCTATCATA+TGG | + | chr3_1:66323447-66323466 | Msa0369230:intron | 30.0% | |
| !! | CTCCTTTAGGATAAATTCTT+AGG | - | chr3_1:66323518-66323537 | None:intergenic | 30.0% |
| ! | GTGTTCAATCCACAAATTTT+AGG | + | chr3_1:66323541-66323560 | Msa0369230:CDS | 30.0% |
| TAAATGTGGCCTAAAATTTG+TGG | - | chr3_1:66323553-66323572 | None:intergenic | 30.0% | |
| ! | ACAAATTTTAGGCCACATTT+AGG | + | chr3_1:66323552-66323571 | Msa0369230:CDS | 30.0% |
| ! | CAAATTTTAGGCCACATTTA+GGG | + | chr3_1:66323553-66323572 | Msa0369230:CDS | 30.0% |
| CATAACGCAATTCAAATACA+TGG | + | chr3_1:66323691-66323710 | Msa0369230:intron | 30.0% | |
| !! | TAACCATGATTTTCAAGCAT+TGG | + | chr3_1:66323791-66323810 | Msa0369230:intron | 30.0% |
| ! | ACTTTTAATATCTGCTTCAC+TGG | - | chr3_1:66324139-66324158 | None:intergenic | 30.0% |
| ! | AAGTATATAAAGGAGTTGGT+TGG | + | chr3_1:66324243-66324262 | Msa0369230:CDS | 30.0% |
| GAAGAAAACAAGTGTAAAGA+TGG | + | chr3_1:66324440-66324459 | Msa0369230:CDS | 30.0% | |
| CGAAGTGAAAGATAAAGATA+AGG | + | chr3_1:66324536-66324555 | Msa0369230:CDS | 30.0% | |
| !!! | TATTTTGGTAGTCTGATCAA+TGG | + | chr3_1:66324770-66324789 | Msa0369230:three_prime_UTR | 30.0% |
| !! | TTTTCTAGAGGTTAGGTGAT+TGG | - | chr3_1:66320098-66320117 | None:intergenic | 35.0% |
| ! | TAATTTCTCACACCCTTTTG+TGG | - | chr3_1:66320318-66320337 | None:intergenic | 35.0% |
| TTCAAAACAGAGGAAAACAG+AGG | + | chr3_1:66320346-66320365 | Msa0369230:five_prime_UTR | 35.0% | |
| AGAACCACCTTTAGATCTTA+AGG | + | chr3_1:66320456-66320475 | Msa0369230:CDS | 35.0% | |
| GATTCCTTAAGATCTAAAGG+TGG | - | chr3_1:66320463-66320482 | None:intergenic | 35.0% | |
| GGATCAACTACTTAGATTCA+TGG | + | chr3_1:66320522-66320541 | Msa0369230:CDS | 35.0% | |
| TCAACTACTTAGATTCATGG+TGG | + | chr3_1:66320525-66320544 | Msa0369230:CDS | 35.0% | |
| ! | TTTGGAGCCAATCATTGAAA+AGG | + | chr3_1:66320582-66320601 | Msa0369230:CDS | 35.0% |
| AATGAAACTAGCAGTATTGC+AGG | + | chr3_1:66320628-66320647 | Msa0369230:CDS | 35.0% | |
| CTGCTTCTAGATGATTTCAA+TGG | + | chr3_1:66320679-66320698 | Msa0369230:CDS | 35.0% | |
| TGATTTCAATGGTCCCTTAA+AGG | + | chr3_1:66320690-66320709 | Msa0369230:CDS | 35.0% | |
| AAGTGCAACACAATCAGATT+TGG | - | chr3_1:66321279-66321298 | None:intergenic | 35.0% | |
| CAAAAAAACTAAGAGGTTCC+TGG | + | chr3_1:66321613-66321632 | Msa0369230:intron | 35.0% | |
| !! | AAATTTTTGCCACTTGAACC+AGG | - | chr3_1:66321634-66321653 | None:intergenic | 35.0% |
| ATTGCAGGTACATCATGATA+TGG | + | chr3_1:66322138-66322157 | Msa0369230:intron | 35.0% | |
| GGTGGTATTAAAGTAGTTCA+TGG | + | chr3_1:66322319-66322338 | Msa0369230:CDS | 35.0% | |
| AAACATTTGGTTAGTGCAAC+TGG | - | chr3_1:66322462-66322481 | None:intergenic | 35.0% | |
| AGTTGCACTAACCAAATGTT+TGG | + | chr3_1:66322461-66322480 | Msa0369230:CDS | 35.0% | |
| !!! | TATCCTGAAGTTTTGGTGTT+AGG | - | chr3_1:66322551-66322570 | None:intergenic | 35.0% |
| ! | GCAAAGTTATCCTGAAGTTT+TGG | - | chr3_1:66322558-66322577 | None:intergenic | 35.0% |
| !!! | TTTTTTAGTGATGCTGGTGA+GGG | - | chr3_1:66322932-66322951 | None:intergenic | 35.0% |
| !!! | ATTTTTTAGTGATGCTGGTG+AGG | - | chr3_1:66322933-66322952 | None:intergenic | 35.0% |
| TCCATTTGACACATGATTGT+TGG | - | chr3_1:66323008-66323027 | None:intergenic | 35.0% | |
| AATCGTCTGAAGATGAAACA+TGG | + | chr3_1:66323032-66323051 | Msa0369230:CDS | 35.0% | |
| ATCGTCTGAAGATGAAACAT+GGG | + | chr3_1:66323033-66323052 | Msa0369230:CDS | 35.0% | |
| ACAGGAACAACAAGATTCTA+TGG | + | chr3_1:66323057-66323076 | Msa0369230:CDS | 35.0% | |
| TATGGCTAAACTGAAAACTG+AGG | + | chr3_1:66323075-66323094 | Msa0369230:CDS | 35.0% | |
| TAAACTGAAAACTGAGGACA+TGG | + | chr3_1:66323081-66323100 | Msa0369230:CDS | 35.0% | |
| GTTCTATGGCAGAAAGTAAA+TGG | + | chr3_1:66323171-66323190 | Msa0369230:intron | 35.0% | |
| GAAAGTAAATGGTGAAGAGA+TGG | + | chr3_1:66323182-66323201 | Msa0369230:intron | 35.0% | |
| CATTTGATTACAATCCATGG+TGG | + | chr3_1:66323261-66323280 | Msa0369230:CDS | 35.0% | |
| !! | GATAGACTAAAAGTTGATGG+TGG | + | chr3_1:66323306-66323325 | Msa0369230:CDS | 35.0% |
| !! | TTGATGGTGGTAAAGTTAGA+AGG | + | chr3_1:66323319-66323338 | Msa0369230:CDS | 35.0% |
| TGATAGGTACCTAATTAGGT+CGG | - | chr3_1:66323394-66323413 | None:intergenic | 35.0% | |
| TGTATGTCAAGCCATATGAT+AGG | - | chr3_1:66323461-66323480 | None:intergenic | 35.0% | |
| ! | GCAGGTTAGAATTGTGTTTT+TGG | + | chr3_1:66323611-66323630 | Msa0369230:intron | 35.0% |
| !! | CATGGTTAATTAGGTTTTGG+TGG | - | chr3_1:66323779-66323798 | None:intergenic | 35.0% |
| ATGCCAATGCTTGAAAATCA+TGG | - | chr3_1:66323797-66323816 | None:intergenic | 35.0% | |
| TAAAAGGTTCTCTAATAGGC+TGG | - | chr3_1:66323838-66323857 | None:intergenic | 35.0% | |
| CATAAGAAACCATAATGTCG+TGG | + | chr3_1:66323902-66323921 | Msa0369230:intron | 35.0% | |
| AGAAATGTATGTGGTCACAA+TGG | - | chr3_1:66323928-66323947 | None:intergenic | 35.0% | |
| !!! | TATTTTTTATGACAGGGGCA+TGG | + | chr3_1:66323989-66324008 | Msa0369230:intron | 35.0% |
| ! | AGGCTTTTGATCCTAAAAGA+AGG | + | chr3_1:66324110-66324129 | Msa0369230:CDS | 35.0% |
| ! | TTCACTGGAAACCTTCTTTT+AGG | - | chr3_1:66324124-66324143 | None:intergenic | 35.0% |
| CTAACCTTTGTGTAAAAGTC+TGG | - | chr3_1:66324311-66324330 | None:intergenic | 35.0% | |
| TTTACACAAAGGTTAGTACC+CGG | + | chr3_1:66324315-66324334 | Msa0369230:intron | 35.0% | |
| TGGAGAAGAACTATACAAAC+CGG | - | chr3_1:66324337-66324356 | None:intergenic | 35.0% | |
| CAAGTGTAAAGATGGACAAT+TGG | + | chr3_1:66324448-66324467 | Msa0369230:CDS | 35.0% | |
| TGGACAATTGGTATCCTATT+TGG | + | chr3_1:66324460-66324479 | Msa0369230:CDS | 35.0% | |
| GGACAATTGGTATCCTATTT+GGG | + | chr3_1:66324461-66324480 | Msa0369230:CDS | 35.0% | |
| CTTTATCTTTCACTTCGATC+CGG | - | chr3_1:66324533-66324552 | None:intergenic | 35.0% | |
| ! | AACTCTGTCAAGCTTTTACT+TGG | + | chr3_1:66324657-66324676 | Msa0369230:CDS | 35.0% |
| GTTCATCCAAATATGGGAAT+CGG | + | chr3_1:66324716-66324735 | Msa0369230:three_prime_UTR | 35.0% | |
| ! | ATCTGCTGAAGGTATAATGT+TGG | + | chr3_1:66324812-66324831 | Msa0369230:three_prime_UTR | 35.0% |
| ! | GATTGGCTCCAAATCCAATA+AGG | - | chr3_1:66320575-66320594 | None:intergenic | 40.0% |
| GTGCATACCTCATCCTTTAA+GGG | - | chr3_1:66320706-66320725 | None:intergenic | 40.0% | |
| AGTGCATACCTCATCCTTTA+AGG | - | chr3_1:66320707-66320726 | None:intergenic | 40.0% | |
| ACAAATCTCACACTTTGGTG+GGG | - | chr3_1:66321431-66321450 | None:intergenic | 40.0% | |
| CACAAATCTCACACTTTGGT+GGG | - | chr3_1:66321432-66321451 | None:intergenic | 40.0% | |
| TCACAAATCTCACACTTTGG+TGG | - | chr3_1:66321433-66321452 | None:intergenic | 40.0% | |
| CACTCACAAATCTCACACTT+TGG | - | chr3_1:66321436-66321455 | None:intergenic | 40.0% | |
| CAAAGTGTGAGATTTGTGAG+TGG | + | chr3_1:66321434-66321453 | Msa0369230:intron | 40.0% | |
| ATTCTCCGTATAGAAACCGT+GGG | - | chr3_1:66321499-66321518 | None:intergenic | 40.0% | |
| TATTCTCCGTATAGAAACCG+TGG | - | chr3_1:66321500-66321519 | None:intergenic | 40.0% | |
| !! | ACATACAAAGTGGAGGTGTT+GGG | - | chr3_1:66321696-66321715 | None:intergenic | 40.0% |
| TTCGGTACGTAAGTTCTCAA+TGG | + | chr3_1:66321939-66321958 | Msa0369230:intron | 40.0% | |
| TGGCCATCTTCAACTAAAGA+TGG | + | chr3_1:66322298-66322317 | Msa0369230:CDS | 40.0% | |
| CCACCATCTTTAGTTGAAGA+TGG | - | chr3_1:66322304-66322323 | None:intergenic | 40.0% | |
| CCATCTTCAACTAAAGATGG+TGG | + | chr3_1:66322301-66322320 | Msa0369230:CDS | 40.0% | |
| CGTCATGTATCAGTGCTTAT+AGG | - | chr3_1:66322617-66322636 | None:intergenic | 40.0% | |
| ! | CTATGTGATAGTGTTGTGTC+CGG | - | chr3_1:66322646-66322665 | None:intergenic | 40.0% |
| GCCAACAATCATGTGTCAAA+TGG | + | chr3_1:66323004-66323023 | Msa0369230:CDS | 40.0% | |
| TCGTCTGAAGATGAAACATG+GGG | + | chr3_1:66323034-66323053 | Msa0369230:CDS | 40.0% | |
| TGAAAACTGAGGACATGGTA+AGG | + | chr3_1:66323086-66323105 | Msa0369230:intron | 40.0% | |
| ! | ATCCATGGTGGAAAATCAGA+AGG | + | chr3_1:66323273-66323292 | Msa0369230:CDS | 40.0% |
| ! | TACCTTCTGATTTTCCACCA+TGG | - | chr3_1:66323278-66323297 | None:intergenic | 40.0% |
| AAATCTGCTTCTGAGTCTCA+TGG | + | chr3_1:66323366-66323385 | Msa0369230:CDS | 40.0% | |
| GATTGAACACGTTCTCCTTT+AGG | - | chr3_1:66323531-66323550 | None:intergenic | 40.0% | |
| ! | ATTTTAGGCCACATTTAGGG+TGG | + | chr3_1:66323556-66323575 | Msa0369230:CDS | 40.0% |
| GATGGTTGCATTCAATATGC+AGG | + | chr3_1:66323593-66323612 | Msa0369230:CDS | 40.0% | |
| !! | TCAAGCATTGGCATATTGCA+TGG | + | chr3_1:66323803-66323822 | Msa0369230:intron | 40.0% |
| ! | TCCACCAGACTTTTACACAA+AGG | + | chr3_1:66324304-66324323 | Msa0369230:CDS | 40.0% |
| ACCTTTGTGTAAAAGTCTGG+TGG | - | chr3_1:66324308-66324327 | None:intergenic | 40.0% | |
| GGAGAAGAACTATACAAACC+GGG | - | chr3_1:66324336-66324355 | None:intergenic | 40.0% | |
| GATCAATCTGATTGTGTGAC+AGG | + | chr3_1:66324383-66324402 | Msa0369230:intron | 40.0% | |
| ! | AAGGGATCAGATGATTTTGC+TGG | + | chr3_1:66324555-66324574 | Msa0369230:CDS | 40.0% |
| CAGAGCTAAGACATGGATTT+CGG | + | chr3_1:66324598-66324617 | Msa0369230:CDS | 40.0% | |
| !! | TGTTGCTTTGTGTGACAGAA+AGG | + | chr3_1:66324623-66324642 | Msa0369230:CDS | 40.0% |
| ! | GTTGCTTTGTGTGACAGAAA+GGG | + | chr3_1:66324624-66324643 | Msa0369230:CDS | 40.0% |
| AGACGTCGTTCATCCAAATA+TGG | + | chr3_1:66324709-66324728 | Msa0369230:exon | 40.0% | |
| GACGTCGTTCATCCAAATAT+GGG | + | chr3_1:66324710-66324729 | Msa0369230:exon | 40.0% | |
| GTGAATCCGATTCCCATATT+TGG | - | chr3_1:66324725-66324744 | None:intergenic | 40.0% | |
| CAGTATTGCAGGACTCAGTT+TGG | + | chr3_1:66320639-66320658 | Msa0369230:CDS | 45.0% | |
| CAATGGTCCCTTAAAGGATG+AGG | + | chr3_1:66320696-66320715 | Msa0369230:CDS | 45.0% | |
| GGGGCGTGTACATAGAAAAT+TGG | - | chr3_1:66321479-66321498 | None:intergenic | 45.0% | |
| ! | TTTTCTATGTACACGCCCCA+CGG | + | chr3_1:66321480-66321499 | Msa0369230:intron | 45.0% |
| TTCTCCGTATAGAAACCGTG+GGG | - | chr3_1:66321498-66321517 | None:intergenic | 45.0% | |
| ACGGAGAATAGTCTCTATCG+CGG | + | chr3_1:66321510-66321529 | Msa0369230:intron | 45.0% | |
| TAAGAGGTTCCTGGTTCAAG+TGG | + | chr3_1:66321622-66321641 | Msa0369230:intron | 45.0% | |
| !! | AGGTGTTGGGATTTGAATCC+CGG | - | chr3_1:66321683-66321702 | None:intergenic | 45.0% |
| ! | CACATACAAAGTGGAGGTGT+TGG | - | chr3_1:66321697-66321716 | None:intergenic | 45.0% |
| GGTACGTAAGTTCTCAATGG+AGG | + | chr3_1:66321942-66321961 | Msa0369230:intron | 45.0% | |
| GGACACAATTCCTACCTTAC+TGG | + | chr3_1:66322193-66322212 | Msa0369230:CDS | 45.0% | |
| TTTGGTTAGTGCAACTGGAG+TGG | - | chr3_1:66322457-66322476 | None:intergenic | 45.0% | |
| !!! | CCTGAAGTTTTGGTGTTAGG+TGG | - | chr3_1:66322548-66322567 | None:intergenic | 45.0% |
| CCACCTAACACCAAAACTTC+AGG | + | chr3_1:66322545-66322564 | Msa0369230:CDS | 45.0% | |
| TCAGTTTGAGGATGCTCCTT+TGG | - | chr3_1:66322980-66322999 | None:intergenic | 45.0% | |
| !! | AAGGAGCATCCTCAAACTGA+TGG | + | chr3_1:66322980-66322999 | Msa0369230:CDS | 45.0% |
| TTGTTGGCACCATCAGTTTG+AGG | - | chr3_1:66322992-66323011 | None:intergenic | 45.0% | |
| TGAAGATGAAACATGGGGAC+AGG | + | chr3_1:66323039-66323058 | Msa0369230:CDS | 45.0% | |
| CTGAGGACATGGTAAGGAAT+AGG | + | chr3_1:66323092-66323111 | Msa0369230:intron | 45.0% | |
| CCATACATCCACCCTAAATG+TGG | - | chr3_1:66323567-66323586 | None:intergenic | 45.0% | |
| ! | CCACATTTAGGGTGGATGTA+TGG | + | chr3_1:66323564-66323583 | Msa0369230:CDS | 45.0% |
| TCACAATGGCCACGACATTA+TGG | - | chr3_1:66323914-66323933 | None:intergenic | 45.0% | |
| ! | AAATCACTCCGGTTGATGCA+AGG | + | chr3_1:66324013-66324032 | Msa0369230:CDS | 45.0% |
| ! | AATCACTCCGGTTGATGCAA+GGG | + | chr3_1:66324014-66324033 | Msa0369230:CDS | 45.0% |
| TGAACATCCCTTGCATCAAC+CGG | - | chr3_1:66324024-66324043 | None:intergenic | 45.0% | |
| CAAGGGATGTTCAAAGCGAA+TGG | + | chr3_1:66324031-66324050 | Msa0369230:CDS | 45.0% | |
| GGATGTTCAAAGCGAATGGA+GGG | + | chr3_1:66324035-66324054 | Msa0369230:CDS | 45.0% | |
| GTGTGACAGGTTTGTATTGC+TGG | + | chr3_1:66324396-66324415 | Msa0369230:intron | 45.0% | |
| ACAGGTTTGTATTGCTGGAG+TGG | + | chr3_1:66324401-66324420 | Msa0369230:intron | 45.0% | |
| CAGGTTTGTATTGCTGGAGT+GGG | + | chr3_1:66324402-66324421 | Msa0369230:intron | 45.0% | |
| TCGAACTCTTCGTCCCAAAT+AGG | - | chr3_1:66324477-66324496 | None:intergenic | 45.0% | |
| !! | CCATGTCTTAGCTCTGATAC+AGG | - | chr3_1:66324594-66324613 | None:intergenic | 45.0% |
| CCTGTATCAGAGCTAAGACA+TGG | + | chr3_1:66324591-66324610 | Msa0369230:CDS | 45.0% | |
| GAGAATAGTCTCTATCGCGG+TGG | + | chr3_1:66321513-66321532 | Msa0369230:intron | 50.0% | |
| GTTAGGTCGGACGTTATGAC+CGG | + | chr3_1:66321661-66321680 | Msa0369230:intron | 50.0% | |
| TTAGGTCGGACGTTATGACC+GGG | + | chr3_1:66321662-66321681 | Msa0369230:intron | 50.0% | |
| CTGATACATGACGCAGACAC+CGG | + | chr3_1:66322624-66322643 | Msa0369230:intron | 50.0% | |
| TTTCAGACACCATCACGTGC+CGG | + | chr3_1:66322708-66322727 | Msa0369230:intron | 50.0% | |
| GTTTGAGGATGCTCCTTTGG+TGG | - | chr3_1:66322977-66322996 | None:intergenic | 50.0% | |
| TGTATTCACGTGCACCTTGC+TGG | - | chr3_1:66323239-66323258 | None:intergenic | 50.0% | |
| CTCATGGAGCCGACCTAATT+AGG | + | chr3_1:66323382-66323401 | Msa0369230:CDS | 50.0% | |
| GTGGATGTATGGAGCTCAGA+TGG | + | chr3_1:66323575-66323594 | Msa0369230:CDS | 50.0% | |
| GGGATGTTCAAAGCGAATGG+AGG | + | chr3_1:66324034-66324053 | Msa0369230:CDS | 50.0% | |
| TTCAAAGCGAATGGAGGGTG+CGG | + | chr3_1:66324040-66324059 | Msa0369230:CDS | 50.0% | |
| !! | CGAGCTCTGGAACAGTCAAT+TGG | - | chr3_1:66324503-66324522 | None:intergenic | 50.0% |
| TCACACTTTGGTGGGGTACG+TGG | - | chr3_1:66321424-66321443 | None:intergenic | 55.0% | |
| CACGCCCCACGGTTTCTATA+CGG | + | chr3_1:66321491-66321510 | Msa0369230:intron | 55.0% | |
| GCATATTGTCCGGCACGTGA+TGG | - | chr3_1:66322720-66322739 | None:intergenic | 55.0% | |
| ! | AGGGGCATGGCAAATCACTC+CGG | + | chr3_1:66324002-66324021 | Msa0369230:intron | 55.0% |
| TTCCAGAGCTCGCGTTGCTC+CGG | + | chr3_1:66324511-66324530 | Msa0369230:CDS | 60.0% | |
| ATCCGGAGCAACGCGAGCTC+TGG | - | chr3_1:66324516-66324535 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 66320074 | 66324844 | 66320074 | ID=Msa0369230;Name=Msa0369230 |
| chr3_1 | mRNA | 66320074 | 66324844 | 66320074 | ID=Msa0369230-mRNA-1;Parent=Msa0369230;Name=Msa0369230-mRNA-1;_AED=0.08;_eAED=0.08;_QI=320|0.77|0.9|0.9|1|1|10|134|619 |
| chr3_1 | exon | 66320074 | 66320717 | 66320074 | ID=Msa0369230-mRNA-1:exon:13431;Parent=Msa0369230-mRNA-1 |
| chr3_1 | exon | 66322145 | 66322344 | 66322145 | ID=Msa0369230-mRNA-1:exon:13432;Parent=Msa0369230-mRNA-1 |
| chr3_1 | exon | 66322446 | 66322581 | 66322446 | ID=Msa0369230-mRNA-1:exon:13433;Parent=Msa0369230-mRNA-1 |
| chr3_1 | exon | 66322714 | 66322791 | 66322714 | ID=Msa0369230-mRNA-1:exon:13434;Parent=Msa0369230-mRNA-1 |
| chr3_1 | exon | 66322866 | 66323102 | 66322866 | ID=Msa0369230-mRNA-1:exon:13435;Parent=Msa0369230-mRNA-1 |
| chr3_1 | exon | 66323183 | 66323403 | 66323183 | ID=Msa0369230-mRNA-1:exon:13436;Parent=Msa0369230-mRNA-1 |
| chr3_1 | exon | 66323497 | 66323614 | 66323497 | ID=Msa0369230-mRNA-1:exon:13437;Parent=Msa0369230-mRNA-1 |
| chr3_1 | exon | 66324004 | 66324156 | 66324004 | ID=Msa0369230-mRNA-1:exon:13438;Parent=Msa0369230-mRNA-1 |
| chr3_1 | exon | 66324239 | 66324325 | 66324239 | ID=Msa0369230-mRNA-1:exon:13439;Parent=Msa0369230-mRNA-1 |
| chr3_1 | exon | 66324405 | 66324844 | 66324405 | ID=Msa0369230-mRNA-1:exon:13440;Parent=Msa0369230-mRNA-1 |
| chr3_1 | five_prime_UTR | 66320074 | 66320393 | 66320074 | ID=Msa0369230-mRNA-1:five_prime_utr;Parent=Msa0369230-mRNA-1 |
| chr3_1 | CDS | 66320394 | 66320717 | 66320394 | ID=Msa0369230-mRNA-1:cds;Parent=Msa0369230-mRNA-1 |
| chr3_1 | CDS | 66322145 | 66322344 | 66322145 | ID=Msa0369230-mRNA-1:cds;Parent=Msa0369230-mRNA-1 |
| chr3_1 | CDS | 66322446 | 66322581 | 66322446 | ID=Msa0369230-mRNA-1:cds;Parent=Msa0369230-mRNA-1 |
| chr3_1 | CDS | 66322714 | 66322791 | 66322714 | ID=Msa0369230-mRNA-1:cds;Parent=Msa0369230-mRNA-1 |
| chr3_1 | CDS | 66322866 | 66323102 | 66322866 | ID=Msa0369230-mRNA-1:cds;Parent=Msa0369230-mRNA-1 |
| chr3_1 | CDS | 66323183 | 66323403 | 66323183 | ID=Msa0369230-mRNA-1:cds;Parent=Msa0369230-mRNA-1 |
| chr3_1 | CDS | 66323497 | 66323614 | 66323497 | ID=Msa0369230-mRNA-1:cds;Parent=Msa0369230-mRNA-1 |
| chr3_1 | CDS | 66324004 | 66324156 | 66324004 | ID=Msa0369230-mRNA-1:cds;Parent=Msa0369230-mRNA-1 |
| chr3_1 | CDS | 66324239 | 66324325 | 66324239 | ID=Msa0369230-mRNA-1:cds;Parent=Msa0369230-mRNA-1 |
| chr3_1 | CDS | 66324405 | 66324710 | 66324405 | ID=Msa0369230-mRNA-1:cds;Parent=Msa0369230-mRNA-1 |
| chr3_1 | three_prime_UTR | 66324711 | 66324844 | 66324711 | ID=Msa0369230-mRNA-1:three_prime_utr;Parent=Msa0369230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
