AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1465210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1465210 MtrunA17_Chr1g0199321 98.730 630 8 0 1 630 1 630 0.0 1269
Msa1465210 MtrunA17_Chr4g0031431 54.808 624 268 2 12 621 6 629 0.0 657
Msa1465210 MtrunA17_Chr7g0237931 48.479 559 267 6 66 618 62 605 1.05e-163 481
Msa1465210 MtrunA17_Chr4g0044411 45.114 614 299 7 38 622 46 650 2.21e-163 482
Msa1465210 MtrunA17_Chr7g0248251 42.351 621 346 5 9 622 29 644 6.48e-156 463
Msa1465210 MtrunA17_Chr5g0437411 35.575 669 349 11 21 620 30 685 5.31e-123 380
Msa1465210 MtrunA17_Chr2g0284461 35.987 628 358 13 33 622 56 677 2.15e-98 316
Msa1465210 MtrunA17_Chr7g0234671 40.050 397 211 10 235 621 73 452 4.14e-84 271
Msa1465210 MtrunA17_Chr7g0275081 39.344 427 234 11 207 620 38 452 1.33e-80 262
Msa1465210 MtrunA17_Chr3g0106931 56.089 271 118 1 345 615 553 822 3.11e-79 268
Msa1465210 MtrunA17_Chr3g0106931 63.291 79 28 1 244 321 229 307 4.63e-27 117
Msa1465210 MtrunA17_Chr4g0059201 32.072 608 381 13 40 619 100 703 1.37e-78 264
Msa1465210 MtrunA17_Chr4g0013091 32.025 637 393 17 15 620 71 698 5.35e-76 257
Msa1465210 MtrunA17_Chr2g0290151 47.163 282 149 0 345 626 175 456 9.39e-71 236
Msa1465210 MtrunA17_Chr3g0134761 45.714 280 148 1 345 620 51 330 4.01e-69 228
Msa1465210 MtrunA17_Chr1g0189811 38.875 391 223 8 242 623 58 441 3.48e-68 229
Msa1465210 MtrunA17_Chr1g0152561 43.841 276 155 0 345 620 61 336 6.71e-68 225
Msa1465210 MtrunA17_Chr7g0261371 48.718 273 139 1 343 615 512 783 2.60e-66 232
Msa1465210 MtrunA17_Chr7g0261371 30.284 317 194 8 17 322 16 316 8.01e-28 119
Msa1465210 MtrunA17_Chr1g0183781 48.339 271 139 1 345 615 440 709 6.34e-66 229
Msa1465210 MtrunA17_Chr1g0183781 29.355 310 194 7 15 314 14 308 1.79e-25 111
Msa1465210 MtrunA17_Chr1g0198984 90.179 112 11 0 260 371 1 112 1.10e-65 211
Msa1465210 MtrunA17_Chr3g0117851 27.375 621 371 14 41 627 56 630 5.16e-59 209
Msa1465210 MtrunA17_Chr5g0413681 30.032 616 386 14 40 619 59 665 5.37e-59 210
Msa1465210 MtrunA17_Chr3g0122721 29.493 434 243 10 245 619 278 707 1.74e-49 184
Msa1465210 MtrunA17_Chr1g0199031 73.043 115 14 1 421 535 17 114 4.91e-44 153
Msa1465210 MtrunA17_Chr8g0377151 29.128 436 250 10 248 626 283 716 8.44e-44 167
Msa1465210 MtrunA17_Chr2g0280671 31.053 380 236 9 249 619 17 379 1.93e-42 157
Msa1465210 MtrunA17_Chr1g0199011 87.500 80 10 0 132 211 52 131 5.27e-41 145
Msa1465210 MtrunA17_Chr3g0118001 36.462 277 171 2 346 619 212 486 9.10e-41 155
Msa1465210 MtrunA17_Chr4g0044631 29.648 398 256 11 247 630 14 401 5.88e-34 134
Msa1465210 MtrunA17_Chr4g0048811 29.243 383 194 11 247 619 5 320 3.15e-31 124
Msa1465210 MtrunA17_Chr8g0373031 24.550 444 270 10 248 628 276 717 3.77e-31 129
Msa1465210 MtrunA17_Chr5g0400971 27.300 337 224 6 247 577 67 388 6.54e-31 126
Msa1465210 MtrunA17_Chr5g0429231 35.231 281 175 5 345 619 34 313 2.20e-30 122
Msa1465210 MtrunA17_Chr3g0110121 26.301 346 225 8 247 573 36 370 4.99e-29 120
Msa1465210 MtrunA17_Chr6g0451581 31.746 252 167 2 367 615 260 509 8.96e-29 120
Msa1465210 MtrunA17_Chr1g0152291 27.701 361 232 9 247 598 45 385 7.04e-28 117
Msa1465210 MtrunA17_Chr1g0199021 84.211 57 9 0 223 279 1 57 8.57e-27 103
Msa1465210 MtrunA17_Chr2g0322021 32.143 308 188 9 247 542 6 304 9.00e-27 113
Msa1465210 MtrunA17_Chr3g0137061 31.293 294 188 6 343 624 108 399 2.18e-26 113
Msa1465210 MtrunA17_Chr7g0267501 30.034 293 175 9 247 517 8 292 6.23e-26 110
Msa1465210 MtrunA17_Chr3g0129811 27.151 372 231 11 247 596 83 436 6.50e-26 111
Msa1465210 MtrunA17_Chr8g0384041 27.586 377 225 13 247 596 10 365 6.59e-26 110
Msa1465210 MtrunA17_Chr5g0420471 27.336 428 241 15 246 627 24 427 8.95e-26 110
Msa1465210 MtrunA17_Chr1g0177281 29.653 317 159 12 251 519 11 311 2.58e-25 109
Msa1465210 MtrunA17_Chr1g0149941 31.206 282 180 6 355 624 184 463 3.11e-25 110
Msa1465210 MtrunA17_Chr1g0198971 90.385 52 5 0 132 183 52 103 3.34e-25 100
Msa1465210 MtrunA17_Chr1g0177261 29.245 318 161 12 251 520 11 312 4.25e-25 108
Msa1465210 MtrunA17_Chr6g0479261 27.251 411 259 13 246 625 24 425 6.44e-25 108
Msa1465210 MtrunA17_Chr1g0177271 29.260 311 170 9 251 520 11 312 5.67e-24 105
Msa1465210 MtrunA17_Chr5g0434171 25.189 397 259 14 247 618 35 418 9.26e-23 101
Msa1465210 MtrunA17_Chr5g0404311 53.333 75 35 0 248 322 274 348 2.54e-22 102
Msa1465210 MtrunA17_Chr8g0353271 30.820 305 186 13 339 624 2 300 1.26e-20 93.6
Msa1465210 MtrunA17_Chr2g0278251 44.068 118 62 3 392 507 5 120 8.27e-20 86.7
Msa1465210 MtrunA17_Chr6g0449461 28.873 284 187 7 346 619 3 281 1.01e-18 87.8
Msa1465210 MtrunA17_Chr5g0435041 28.571 266 134 9 377 629 92 314 6.14e-18 86.3
Msa1465210 MtrunA17_Chr1g0188041 21.519 553 361 13 67 566 68 600 3.47e-17 85.9
Msa1465210 MtrunA17_Chr1g0177301 37.324 142 77 4 247 386 6 137 7.20e-17 83.2
Msa1465210 MtrunA17_Chr3g0144071 24.912 285 176 9 242 514 26 284 2.72e-16 82.8
Msa1465210 MtrunA17_Chr1g0196911 38.356 146 79 6 248 391 507 643 2.20e-15 80.5
Msa1465210 MtrunA17_Chr4g0025501 34.459 148 85 4 247 391 6 144 2.93e-15 78.2
Msa1465210 MtrunA17_Chr7g0275961 28.727 275 169 8 245 515 252 503 1.66e-14 77.4
Msa1465210 MtrunA17_Chr8g0390311 46.053 76 40 1 248 322 396 471 2.45e-14 77.0
Msa1465210 MtrunA17_Chr5g0412171 44.776 67 37 0 247 313 732 798 8.66e-14 74.7
Msa1465210 MtrunA17_Chr1g0202971 50.000 66 33 0 248 313 649 714 1.17e-13 74.3
Msa1465210 MtrunA17_Chr7g0259851 30.097 206 142 2 345 548 185 390 2.13e-13 73.6
Msa1465210 MtrunA17_Chr7g0215741 35.417 144 90 1 374 514 588 731 2.69e-13 73.6
Msa1465210 MtrunA17_Chr7g0247831 45.714 70 38 0 248 317 827 896 6.53e-13 72.0
Msa1465210 MtrunA17_Chr1g0205751 30.412 194 133 2 345 536 198 391 7.58e-13 71.6
Msa1465210 MtrunA17_Chr5g0394261 31.183 186 126 2 345 528 195 380 9.31e-13 71.2
Msa1465210 MtrunA17_Chr8g0346441 27.273 297 177 8 251 517 263 550 1.59e-12 70.9
Msa1465210 MtrunA17_Chr7g0214471 43.056 72 38 2 244 313 592 662 2.46e-12 70.5
Msa1465210 MtrunA17_Chr4g0070941 40.506 79 46 1 235 313 679 756 1.37e-11 67.8
Msa1465210 MtrunA17_Chr2g0328101 42.857 84 46 2 234 316 728 810 1.58e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1465210 AT3G54850.1 66.612 614 204 1 11 623 12 625 0.0 814
Msa1465210 AT3G46510.1 52.373 632 283 4 5 621 2 630 0.0 640
Msa1465210 AT2G28830.1 51.273 550 245 8 92 621 17 563 6.99e-179 520
Msa1465210 AT1G71020.1 45.866 641 302 12 2 620 3 620 3.00e-159 471
Msa1465210 AT1G23030.1 44.234 633 313 11 2 620 3 609 1.84e-153 456
Msa1465210 AT5G42340.1 42.139 617 330 6 15 622 60 658 3.86e-147 441
Msa1465210 AT1G71020.2 57.545 391 162 3 234 620 82 472 7.00e-142 421
Msa1465210 AT3G07360.1 42.257 381 209 8 248 620 75 452 4.97e-88 282
Msa1465210 AT1G29340.1 35.428 573 338 12 80 622 119 689 2.13e-84 280
Msa1465210 AT2G23140.3 54.513 277 125 1 343 619 352 627 2.13e-82 272
Msa1465210 AT2G23140.3 61.644 73 28 0 250 322 44 116 9.84e-27 115
Msa1465210 AT2G23140.5 54.513 277 125 1 343 619 352 627 2.13e-82 272
Msa1465210 AT2G23140.5 61.644 73 28 0 250 322 44 116 9.84e-27 115
Msa1465210 AT2G23140.2 49.062 320 161 2 300 619 499 816 1.54e-81 274
Msa1465210 AT2G23140.2 29.167 312 179 11 33 328 26 311 5.52e-27 117
Msa1465210 AT2G23140.4 49.062 320 161 2 300 619 499 816 1.54e-81 274
Msa1465210 AT2G23140.4 29.167 312 179 11 33 328 26 311 5.52e-27 117
Msa1465210 AT2G23140.1 49.062 320 161 2 300 619 502 819 1.54e-81 274
Msa1465210 AT2G23140.1 29.167 312 179 11 33 328 29 314 6.00e-27 117
Msa1465210 AT5G01830.1 32.485 668 381 21 1 630 19 654 8.66e-76 255
Msa1465210 AT3G01400.1 44.403 268 149 0 353 620 73 340 1.33e-67 224
Msa1465210 AT5G67340.1 46.154 286 152 2 335 619 413 697 1.64e-65 228
Msa1465210 AT5G67340.2 46.154 286 152 2 335 619 413 697 1.64e-65 228
Msa1465210 AT5G58680.1 39.228 311 185 4 314 620 29 339 6.26e-62 210
Msa1465210 AT4G16490.1 46.127 284 151 1 345 626 185 468 6.86e-61 210
Msa1465210 AT3G54790.2 48.327 269 137 2 348 615 441 708 1.83e-57 206
Msa1465210 AT3G54790.2 27.062 388 260 6 247 615 202 585 1.93e-27 118
Msa1465210 AT3G54790.2 29.952 207 141 4 344 548 520 724 6.41e-14 75.5
Msa1465210 AT3G54790.2 29.891 184 125 4 394 574 404 586 8.51e-13 72.0
Msa1465210 AT3G54790.3 48.327 269 137 2 348 615 477 744 4.39e-57 206
Msa1465210 AT3G54790.3 27.062 388 260 6 247 615 238 621 3.67e-27 117
Msa1465210 AT3G54790.3 29.952 207 141 4 344 548 556 760 7.28e-14 75.5
Msa1465210 AT3G54790.3 29.891 184 125 4 394 574 440 622 1.20e-12 71.6
Msa1465210 AT3G54790.1 48.327 269 137 2 348 615 477 744 4.39e-57 206
Msa1465210 AT3G54790.1 27.062 388 260 6 247 615 238 621 3.67e-27 117
Msa1465210 AT3G54790.1 29.952 207 141 4 344 548 556 760 7.28e-14 75.5
Msa1465210 AT3G54790.1 29.891 184 125 4 394 574 440 622 1.20e-12 71.6
Msa1465210 AT1G60190.1 27.607 652 433 16 6 622 19 666 1.55e-56 203
Msa1465210 AT5G18320.1 36.524 397 218 13 244 621 68 449 1.65e-55 195
Msa1465210 AT3G07360.5 38.438 320 186 8 309 620 1 317 6.31e-54 187
Msa1465210 AT3G07360.3 38.438 320 186 8 309 620 1 317 6.31e-54 187
Msa1465210 AT3G07360.9 38.438 320 186 8 309 620 1 317 6.31e-54 187
Msa1465210 AT3G07360.6 38.438 320 186 8 309 620 1 317 6.31e-54 187
Msa1465210 AT3G07360.2 38.438 320 186 8 309 620 1 317 6.31e-54 187
Msa1465210 AT3G07360.8 38.438 320 186 8 309 620 1 317 6.31e-54 187
Msa1465210 AT3G07360.10 38.438 320 186 8 309 620 1 317 6.31e-54 187
Msa1465210 AT3G07360.7 38.438 320 186 8 309 620 1 317 6.31e-54 187
Msa1465210 AT3G07360.4 38.438 320 186 8 309 620 1 317 6.31e-54 187
Msa1465210 AT1G27910.1 30.645 434 245 10 246 625 278 709 7.54e-49 182
Msa1465210 AT1G10560.1 26.947 642 401 18 33 622 52 677 1.47e-47 178
Msa1465210 AT4G21350.1 33.067 375 236 8 247 618 5 367 1.30e-45 166
Msa1465210 AT5G18330.1 30.211 427 247 15 216 620 48 445 1.12e-41 157
Msa1465210 AT1G24330.1 27.655 452 267 10 233 625 261 711 1.78e-38 152
Msa1465210 AT1G24330.2 27.655 452 267 10 233 625 261 711 1.78e-38 152
Msa1465210 AT5G65200.1 34.754 305 183 4 335 625 213 515 3.55e-38 149
Msa1465210 AT5G62560.1 36.264 273 167 3 348 615 239 509 1.46e-36 144
Msa1465210 AT5G62560.1 23.077 364 246 9 241 574 25 384 1.36e-11 67.8
Msa1465210 AT5G18340.1 29.505 444 276 16 198 618 25 454 7.64e-36 140
Msa1465210 AT5G40140.1 34.256 289 183 4 346 629 231 517 7.75e-35 139
Msa1465210 AT1G49780.1 31.235 413 231 11 247 626 14 406 1.04e-34 137
Msa1465210 AT3G19380.1 31.078 399 222 11 247 624 14 380 4.56e-34 135
Msa1465210 AT1G67530.3 31.378 341 172 13 30 322 21 347 1.16e-30 127
Msa1465210 AT1G67530.2 31.378 341 172 13 30 322 21 347 1.91e-30 127
Msa1465210 AT1G67530.2 27.675 271 186 6 357 619 438 706 6.33e-20 94.7
Msa1465210 AT1G67530.1 31.378 341 172 13 30 322 21 347 1.91e-30 127
Msa1465210 AT1G67530.1 27.675 271 186 6 357 619 438 706 6.33e-20 94.7
Msa1465210 AT1G67530.4 31.378 341 172 13 30 322 21 347 1.91e-30 127
Msa1465210 AT1G67530.4 27.675 271 186 6 357 619 438 706 6.33e-20 94.7
Msa1465210 AT3G47820.1 34.286 280 174 5 348 619 210 487 3.02e-30 125
Msa1465210 AT5G65920.1 27.990 393 236 11 245 617 58 423 6.00e-30 123
Msa1465210 AT5G65920.2 27.990 393 236 11 245 617 58 423 6.00e-30 123
Msa1465210 AT4G31890.3 34.106 302 182 8 342 630 142 439 7.76e-30 124
Msa1465210 AT4G31890.2 34.106 302 182 8 342 630 142 439 7.76e-30 124
Msa1465210 AT4G31890.1 34.106 302 182 8 342 630 142 439 7.76e-30 124
Msa1465210 AT4G12710.1 34.602 289 180 6 348 627 50 338 1.20e-28 119
Msa1465210 AT3G49810.1 28.238 386 240 11 247 617 64 427 1.52e-28 119
Msa1465210 AT5G37490.1 26.478 389 261 10 247 618 31 411 2.76e-28 118
Msa1465210 AT2G35930.1 30.671 313 187 10 247 542 12 311 2.23e-27 115
Msa1465210 AT1G66160.1 25.510 392 258 15 247 621 33 407 1.36e-25 110
Msa1465210 AT2G25130.1 32.841 271 164 8 366 622 132 398 1.05e-23 105
Msa1465210 AT5G64660.1 27.792 403 230 13 247 619 10 381 1.72e-23 103
Msa1465210 AT1G08315.1 30.201 298 185 12 342 618 6 301 6.99e-23 100
Msa1465210 AT3G52450.1 25.822 426 257 14 247 624 7 421 1.04e-21 99.0
Msa1465210 AT5G09800.1 25.203 369 234 13 247 596 11 356 3.48e-21 97.1
Msa1465210 AT3G03440.1 28.966 290 195 6 345 626 66 352 4.21e-20 93.6
Msa1465210 AT3G18710.1 21.827 394 278 10 247 619 12 396 3.69e-19 90.9
Msa1465210 AT5G14510.1 30.634 284 184 8 348 623 5 283 5.37e-17 83.2
Msa1465210 AT1G66160.2 23.469 392 250 16 247 621 33 391 8.16e-17 83.6
Msa1465210 AT4G36550.1 44.737 76 42 0 246 321 218 293 5.95e-16 82.0
Msa1465210 AT2G45920.1 35.897 156 83 6 172 318 249 396 1.19e-15 79.7
Msa1465210 AT1G01680.1 44.928 69 38 0 249 317 235 303 1.68e-14 75.1
Msa1465210 AT3G11840.1 52.778 72 32 2 247 317 10 80 1.85e-14 76.6
Msa1465210 AT3G61390.4 29.651 172 85 6 183 329 198 358 3.38e-14 75.1
Msa1465210 AT3G60350.1 32.022 178 116 2 374 546 590 767 4.05e-14 76.6
Msa1465210 AT3G60350.2 32.022 178 116 2 374 546 590 767 4.05e-14 76.6
Msa1465210 AT1G01660.2 43.421 76 41 1 243 318 496 569 5.26e-14 75.5
Msa1465210 AT3G61390.2 29.651 172 85 6 183 329 273 433 5.53e-14 75.1
Msa1465210 AT1G01660.1 43.421 76 41 1 243 318 495 568 5.68e-14 75.5
Msa1465210 AT2G44900.1 33.728 169 107 2 374 537 599 767 1.64e-13 74.7
Msa1465210 AT2G44900.2 33.728 169 107 2 374 537 599 767 1.64e-13 74.7
Msa1465210 AT1G20780.1 24.685 397 253 14 247 603 23 413 3.75e-13 73.2
Msa1465210 AT1G20780.2 24.685 397 253 14 247 603 23 413 3.75e-13 73.2
Msa1465210 AT1G20780.3 24.685 397 253 14 247 603 23 413 3.75e-13 73.2
Msa1465210 AT1G56040.1 46.479 71 36 1 240 310 348 416 5.29e-13 72.0
Msa1465210 AT5G65500.2 47.761 67 35 0 247 313 723 789 1.57e-12 71.2
Msa1465210 AT5G65500.1 47.761 67 35 0 247 313 715 781 1.67e-12 71.2
Msa1465210 AT1G56030.1 46.032 63 34 0 248 310 324 386 3.52e-12 68.9
Msa1465210 AT5G13060.1 29.798 198 137 2 345 540 227 424 6.22e-12 69.3
Msa1465210 AT2G45910.2 43.836 73 39 1 241 313 759 829 9.87e-12 68.6
Msa1465210 AT2G45910.1 43.836 73 39 1 241 313 759 829 9.87e-12 68.6
Msa1465210 AT5G57035.1 38.750 80 49 0 248 327 709 788 2.33e-11 67.4
Msa1465210 AT5G50900.1 29.353 201 134 5 333 527 131 329 3.25e-11 66.6
Msa1465210 AT1G68940.3 24.699 332 217 8 251 573 250 557 7.01e-11 66.2
Msa1465210 AT1G68940.2 27.826 230 136 6 251 473 303 509 8.04e-11 65.9
Msa1465210 AT1G68940.1 27.826 230 136 6 251 473 303 509 8.24e-11 65.9

Find 145 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATGACATTTGTTCTTAA+AGG 0.137385 tig0045035:+5421 Msa1465210:three_prime_UTR
TCGTATAACCTCAACTAAAA+TGG 0.160485 tig0045035:-5093 Msa1465210:intergenic
CTGCAACTCCCTTGCTTCTT+TGG 0.167120 tig0045035:-4402 Msa1465210:intergenic
TTTCTACGTGTGTTTGAAAA+TGG 0.177732 tig0045035:+678 Msa1465210:exon
GATTCAATCAGGGAGATTTC+TGG 0.219471 tig0045035:+745 Msa1465210:CDS
TTTAGGAAAGAGAGTGAAAT+TGG 0.226482 tig0045035:-488 Msa1465210:intergenic
AACTGCTATCAAAGCTTTAT+TGG 0.228618 tig0045035:+4464 Msa1465210:CDS
TGAAGAGTCTGATTGGTTTA+TGG 0.249287 tig0045035:+4355 Msa1465210:CDS
TCCTTTGTTACTCTCGTTGA+TGG 0.253869 tig0045035:-4676 Msa1465210:intergenic
TGTTACTTGAAAGACAATTT+AGG 0.264563 tig0045035:-505 Msa1465210:intergenic
TGCTGGTGAGCTCCGGTTGC+TGG 0.264800 tig0045035:+4527 Msa1465210:CDS
TTCAAAACATCTACAATATC+TGG 0.273503 tig0045035:-4723 Msa1465210:intergenic
GAGCTTTGTTCAGATTTAAA+AGG 0.294345 tig0045035:-622 Msa1465210:intergenic
CTTCAGGGATTATCAGAAAA+TGG 0.310426 tig0045035:+5224 Msa1465210:CDS
GAATGACATTTGTTCTTAAA+GGG 0.315283 tig0045035:+5422 Msa1465210:three_prime_UTR
AGCAAATTCTGTTTGAGCTT+TGG 0.316577 tig0045035:-3780 Msa1465210:intergenic
CGTATAACCTCAACTAAAAT+GGG 0.330571 tig0045035:-5092 Msa1465210:intergenic
TGAATCTTTGAGGGTTGCTT+TGG 0.331165 tig0045035:+900 Msa1465210:CDS
TGGAGCAGAAGAAGCACTTC+AGG 0.351787 tig0045035:+5208 Msa1465210:CDS
CGAAAATCATCTGGGATTAC+AGG 0.356127 tig0045035:-4085 Msa1465210:intergenic
GTCGTTTGGCTGATTCAATC+AGG 0.358543 tig0045035:+734 Msa1465210:CDS
CAGGGAGATTTCTGGGTTGC+CGG 0.364680 tig0045035:+753 Msa1465210:CDS
AACGTTTGTAAGAAGATGTA+TGG 0.367485 tig0045035:+784 Msa1465210:CDS
AGACTCTTCAAAACGTAGTT+AGG 0.375832 tig0045035:-4342 Msa1465210:intergenic
TCATGGGAGTAAGCTTTATC+AGG 0.393424 tig0045035:+954 Msa1465210:CDS
TTCATCAGTTCGAGAGATAT+AGG 0.393884 tig0045035:-4112 Msa1465210:intergenic
ATTCAATCAGGGAGATTTCT+GGG 0.394094 tig0045035:+746 Msa1465210:CDS
TGACCGGTTGAGACGATTAC+AGG 0.398865 tig0045035:-4139 Msa1465210:intergenic
GGCTATGGTTGTGGGTCGTT+TGG 0.400292 tig0045035:+720 Msa1465210:CDS
TGAAACATTCTCGTTCTCAT+AGG 0.402456 tig0045035:-4047 Msa1465210:intergenic
GCTATAATGACAATCCTTGC+AGG 0.409994 tig0045035:+5026 Msa1465210:CDS
CGACCCACAACCATAGCCTT+TGG 0.411693 tig0045035:-715 Msa1465210:intergenic
CATTTCTCTTGGCCAGCAAC+CGG 0.412479 tig0045035:-4539 Msa1465210:intergenic
CTCACGGTTGCGTGGTGATC+CGG 0.413042 tig0045035:-5117 Msa1465210:intergenic
TCCTTTGTTTGAGGAATTGA+AGG 0.413739 tig0045035:+837 Msa1465210:CDS
GTCCACTGAATTACACGAAT+TGG 0.417527 tig0045035:+3922 Msa1465210:CDS
ATCAGAGGAAGTTCAAGAAC+AGG 0.429116 tig0045035:+3583 Msa1465210:CDS
CAAAGTAACTTTATAAGAGC+CGG 0.431128 tig0045035:-4846 Msa1465210:intergenic
TCCTTTGATACGATTTATGA+AGG 0.431714 tig0045035:+4971 Msa1465210:CDS
GATAGAGCTAAGAGAAAAGC+TGG 0.432820 tig0045035:+5251 Msa1465210:CDS
TTTAATCTATGTATTTATCA+AGG 0.434426 tig0045035:+4912 Msa1465210:CDS
AGTTGCAGAACAAAGAAATC+TGG 0.441575 tig0045035:+4417 Msa1465210:CDS
TCGGTTATCTGCATTTCTCT+TGG 0.444128 tig0045035:-4550 Msa1465210:intergenic
ATAGGACACCGAAAATCATC+TGG 0.444428 tig0045035:-4094 Msa1465210:intergenic
CTTCTCAAGTCCGTGAATCA+TGG 0.447074 tig0045035:+937 Msa1465210:CDS
TCATAGTTCAAATATAGATA+TGG 0.447160 tig0045035:+5355 Msa1465210:three_prime_UTR
TTCTCATAGGTATCAACCTC+AGG 0.450223 tig0045035:-4034 Msa1465210:intergenic
TGCTGATTTACAACTAGACT+TGG 0.455398 tig0045035:+3799 Msa1465210:CDS
TTAGTTGAGGTTATACGAAC+CGG 0.456126 tig0045035:+5098 Msa1465210:CDS
TTGCTGTCCTTCCTTCATGA+TGG 0.458588 tig0045035:-5049 Msa1465210:intergenic
GAATCCAAAGGCTATGGTTG+TGG 0.460327 tig0045035:+711 Msa1465210:CDS
TTCTACGTGTGTTTGAAAAT+GGG 0.461064 tig0045035:+679 Msa1465210:exon
TTCCTTCATGATGGCCTGCA+AGG 0.462779 tig0045035:-5040 Msa1465210:intergenic
TTTACATGTCACAGGCTTTG+CGG 0.464322 tig0045035:+3474 Msa1465210:intron
ACCTCAACTAAAATGGGGAT+TGG 0.466966 tig0045035:-5086 Msa1465210:intergenic
TCAAAACGTAGTTAGGAGTA+AGG 0.468306 tig0045035:-4335 Msa1465210:intergenic
ACCGCATGCTCCTGAGTTCG+AGG 0.468410 tig0045035:-4633 Msa1465210:intergenic
TTAGATCATTCATAGTCCTC+AGG 0.469633 tig0045035:-3892 Msa1465210:intergenic
TTCCACAGATCCTCGAACTC+AGG 0.479457 tig0045035:+4623 Msa1465210:CDS
GAAGGATGCGGGCGGTGGGA+TGG 0.485190 tig0045035:+4989 Msa1465210:CDS
CATGAAGGAAGGACAGCAAT+TGG 0.491237 tig0045035:+5053 Msa1465210:CDS
GGGCGGCTGCTGGTGAGCTC+CGG 0.491475 tig0045035:+4520 Msa1465210:CDS
GTTGCGTTAGAACGTAGAAA+TGG 0.499516 tig0045035:-443 Msa1465210:intergenic
TCTGTCACAATCTGAAAGAC+TGG 0.500337 tig0045035:-4442 Msa1465210:intergenic
AAAGTTGCAATAGGTGCAGC+AGG 0.503040 tig0045035:+4816 Msa1465210:CDS
TTTATGAAGGATGCGGGCGG+TGG 0.504174 tig0045035:+4984 Msa1465210:CDS
AAGCGGTATTGCTCCTGCTT+CGG 0.508786 tig0045035:-4583 Msa1465210:intergenic
AAGCTTACTCCCATGATTCA+CGG 0.509123 tig0045035:-947 Msa1465210:intergenic
TGTTCAGATTTAAAAGGTGA+TGG 0.509723 tig0045035:-616 Msa1465210:intergenic
CGAGTATGTATTGCCGAAGC+AGG 0.513878 tig0045035:+4570 Msa1465210:CDS
GATACGATTTATGAAGGATG+CGG 0.516210 tig0045035:+4977 Msa1465210:CDS
AAGATGAGAAATTTGGATTG+TGG 0.518104 tig0045035:-565 Msa1465210:intergenic
GACGAGAACAAAGTTGCAAT+AGG 0.518268 tig0045035:+4807 Msa1465210:CDS
GATCCTGTAATCGTCTCAAC+CGG 0.519344 tig0045035:+4136 Msa1465210:CDS
TGTAATCGTCTCAACCGGTC+AGG 0.519349 tig0045035:+4141 Msa1465210:CDS
TTCTCAAGTCCGTGAATCAT+GGG 0.519412 tig0045035:+938 Msa1465210:CDS
AATCCAAAGGCTATGGTTGT+GGG 0.521446 tig0045035:+712 Msa1465210:CDS
TGTATGGGAATTTGATTCGT+AGG 0.524170 tig0045035:+800 Msa1465210:CDS
TAATGATATTGAACAGCAAA+GGG 0.525276 tig0045035:+4500 Msa1465210:CDS
AAAGCTAGAGCTGTTAAAGC+CGG 0.526299 tig0045035:+4939 Msa1465210:CDS
ATAACAAGCAACGGAGAACT+AGG 0.529713 tig0045035:+3947 Msa1465210:CDS
GAACAGCAAAGGGCGGCTGC+TGG 0.530588 tig0045035:+4510 Msa1465210:CDS
CTTATAAAGTTACTTTGTGA+AGG 0.532116 tig0045035:+4852 Msa1465210:CDS
AGGAAGGACAGCAATTGGTC+AGG 0.536014 tig0045035:+5058 Msa1465210:CDS
AGGTGCAGCAGGAGCCATCC+CGG 0.539324 tig0045035:+4827 Msa1465210:CDS
GTATGGGAATTTGATTCGTA+GGG 0.540661 tig0045035:+801 Msa1465210:CDS
GTAATGATATTGAACAGCAA+AGG 0.541492 tig0045035:+4499 Msa1465210:CDS
GAACTGTTGCAGCGAATCGA+AGG 0.545611 tig0045035:+5284 Msa1465210:CDS
AACTAAAATGGGGATTGGCT+CGG 0.546120 tig0045035:-5081 Msa1465210:intergenic
ATACGATTTATGAAGGATGC+GGG 0.548943 tig0045035:+4978 Msa1465210:CDS
AAAGTAACTTTATAAGAGCC+GGG 0.549044 tig0045035:-4845 Msa1465210:intergenic
CTCCTGAGTTCGAGGATCTG+TGG 0.551751 tig0045035:-4625 Msa1465210:intergenic
TCCTTCAATTCCTCAAACAA+AGG 0.552404 tig0045035:-838 Msa1465210:intergenic
CTGCTTCGGCAATACATACT+CGG 0.554371 tig0045035:-4569 Msa1465210:intergenic
GGAGCAGAAGAAGCACTTCA+GGG 0.556560 tig0045035:+5209 Msa1465210:CDS
AAGCTAGAGCTGTTAAAGCC+GGG 0.558896 tig0045035:+4940 Msa1465210:CDS
CAAAACGTAGTTAGGAGTAA+GGG 0.565631 tig0045035:-4334 Msa1465210:intergenic
TTATGAAGGATGCGGGCGGT+GGG 0.567221 tig0045035:+4985 Msa1465210:CDS
AACTGTTGCAGCGAATCGAA+GGG 0.569767 tig0045035:+5285 Msa1465210:CDS
GACCAATTCGTGTAATTCAG+TGG 0.570216 tig0045035:-3924 Msa1465210:intergenic
ATCCTTGCAGGCCATCATGA+AGG 0.571335 tig0045035:+5038 Msa1465210:CDS
GAGCGAGAATCCAAAGGCTA+TGG 0.574636 tig0045035:+705 Msa1465210:CDS
TCCTTCATAAATCGTATCAA+AGG 0.578982 tig0045035:-4972 Msa1465210:intergenic
TACGTGTGTTTGAAAATGGG+TGG 0.582750 tig0045035:+682 Msa1465210:exon
AAGGATTGTGATGAGTCTCT+TGG 0.586282 tig0045035:+856 Msa1465210:CDS
TATCAAAGGAGCAACTATCC+CGG 0.586650 tig0045035:-4958 Msa1465210:intergenic
TTGAAACTAGCAAAGGAACA+TGG 0.590002 tig0045035:+5188 Msa1465210:CDS
TCTCAGAGAAGTTGCACCTG+AGG 0.594729 tig0045035:+3876 Msa1465210:CDS
TCGTTTGGCTGATTCAATCA+GGG 0.595220 tig0045035:+735 Msa1465210:CDS
GACAACAAGTCTACGAGAAG+CGG 0.596931 tig0045035:-4600 Msa1465210:intergenic
AAAGTTACACTCGAGAGGCT+AGG 0.597677 tig0045035:-5327 Msa1465210:intergenic
TAACTTTATAAGAGCCGGGA+TGG 0.597754 tig0045035:-4841 Msa1465210:intergenic
ACGTTTGTAAGAAGATGTAT+GGG 0.602477 tig0045035:+785 Msa1465210:CDS
AGAATGTTTCAATTAAGCAC+CGG 0.604626 tig0045035:+4059 Msa1465210:CDS
GCAGCATTCTCACGGTTGCG+TGG 0.609043 tig0045035:-5125 Msa1465210:intergenic
GTTGAACTACCAAAGAAGCA+AGG 0.609236 tig0045035:+4393 Msa1465210:CDS
CATCTGGGATTACAGGAGAC+CGG 0.612294 tig0045035:-4078 Msa1465210:intergenic
TCCTCGAACTCAGGAGCATG+CGG 0.612420 tig0045035:+4632 Msa1465210:CDS
TTGCAGGCCATCATGAAGGA+AGG 0.615941 tig0045035:+5042 Msa1465210:CDS
GATTGTGGATAATACCTGAC+CGG 0.618738 tig0045035:-4155 Msa1465210:intergenic
GATGGAGAATACCCAGATGA+GGG 0.619382 tig0045035:-598 Msa1465210:intergenic
GGTTTATGGTGTGATAGCAA+TGG 0.620008 tig0045035:+4369 Msa1465210:CDS
TTGAACTACCAAAGAAGCAA+GGG 0.622309 tig0045035:+4394 Msa1465210:CDS
TCCATCAACGAGAGTAACAA+AGG 0.627518 tig0045035:+4675 Msa1465210:CDS
AGTTCAAATATAGATATGGT+CGG 0.632146 tig0045035:+5359 Msa1465210:three_prime_UTR
AAACAGCAGCAGCATTCTCA+CGG 0.633676 tig0045035:-5133 Msa1465210:intergenic
ACGTGTGTTTGAAAATGGGT+GGG 0.633785 tig0045035:+683 Msa1465210:exon
ATAATAAAGTTACACTCGAG+AGG 0.634199 tig0045035:-5332 Msa1465210:intergenic
TAGGACACCGAAAATCATCT+GGG 0.636004 tig0045035:-4093 Msa1465210:intergenic
ACATGTCACAGGCTTTGCGG+AGG 0.639360 tig0045035:+3477 Msa1465210:intron
CTTTGTGAAGGTACTCCAAG+AGG 0.641917 tig0045035:+4864 Msa1465210:CDS
TGATGGAGAATACCCAGATG+AGG 0.644335 tig0045035:-599 Msa1465210:intergenic
ACTGCAATTGAAACTAGCAA+AGG 0.645318 tig0045035:+5181 Msa1465210:CDS
GAATTGGTCATAACAAGCAA+CGG 0.648481 tig0045035:+3938 Msa1465210:CDS
GTATAACCTCAACTAAAATG+GGG 0.656481 tig0045035:-5091 Msa1465210:intergenic
CATGGAGGCAAGAGAAAACG+CGG 0.658502 tig0045035:+4755 Msa1465210:CDS
CAACAAACTTGAGATATCAG+AGG 0.659687 tig0045035:+3568 Msa1465210:CDS
TATTTGTTGGAACTTATCTG+CGG 0.662729 tig0045035:-3507 Msa1465210:intergenic
GGGTGGGAGCGAGAATCCAA+AGG 0.667061 tig0045035:+699 Msa1465210:CDS
GTTGCAGCGAATCGAAGGGG+AGG 0.677232 tig0045035:+5289 Msa1465210:CDS
TGATATTGAACAGCAAAGGG+CGG 0.681387 tig0045035:+4503 Msa1465210:CDS
AAAGGAACTATAGTAAACGC+AGG 0.682325 tig0045035:+4693 Msa1465210:CDS
CGTGCTCGCAGAAAATCCTG+AGG 0.685860 tig0045035:+4018 Msa1465210:CDS
ACTGTTGCAGCGAATCGAAG+GGG 0.696214 tig0045035:+5286 Msa1465210:CDS
CGATTTATGAAGGATGCGGG+CGG 0.720329 tig0045035:+4981 Msa1465210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGATGATAAATAAAAATT+CGG + tig0045035:1454-1473 Msa1465210:intron 10.0%
!!! ATAAACTTTTAAAAATGTTA+AGG + tig0045035:5510-5529 Msa1465210:three_prime_UTR 10.0%
!!! TTTTTTTTTTTTATCCCTTT+TGG + tig0045035:986-1005 Msa1465210:intron 15.0%
!!! TTAGTTTTTTATTTGATTGA+TGG + tig0045035:1031-1050 Msa1465210:intron 15.0%
!!! AATTTTAGCTTCAAATTTAT+TGG + tig0045035:1247-1266 Msa1465210:intron 15.0%
!! GTATATTAAAGTTTAGTATA+AGG - tig0045035:2795-2814 Msa1465210:intergenic 15.0%
!! TGATAAAAAGATGAGAAATT+TGG - tig0045035:575-594 Msa0056160:intergenic 20.0%
!! TTTCAATTAAAACACCAAAA+GGG - tig0045035:1003-1022 Msa1465210:intergenic 20.0%
!!! ATTGACTTTTACATAATGTT+TGG + tig0045035:1135-1154 Msa1465210:intron 20.0%
!! TAGTAAAGTTATAATCAACT+CGG - tig0045035:1189-1208 Msa1465210:intergenic 20.0%
!! AAAGTGAATTGAATATAAAG+TGG - tig0045035:1309-1328 Msa1465210:intergenic 20.0%
!!! ATATTCAATTCACTTTTAGT+CGG + tig0045035:1313-1332 Msa1465210:intron 20.0%
!!! AAGGGTAACATAAATTTTAT+AGG - tig0045035:1510-1529 Msa1465210:intergenic 20.0%
!!! AAATTTTCAAGTTTAATTGC+TGG + tig0045035:1847-1866 Msa1465210:intron 20.0%
!! CTATTATGTAATAAAGAGTA+TGG + tig0045035:1926-1945 Msa1465210:intron 20.0%
!! ATGGTAAATAAAGATTTGAT+AGG + tig0045035:1958-1977 Msa1465210:intron 20.0%
!!! AGTTTAGTATAAGGATATTT+TGG - tig0045035:2786-2805 Msa1465210:intergenic 20.0%
!!! GGCTAAACTATTTTTTAATT+TGG + tig0045035:2967-2986 Msa1465210:intron 20.0%
!! AATATAATTGTATATCACCA+TGG + tig0045035:3141-3160 Msa1465210:intron 20.0%
!!! CAATTTTTTCAGTTATTTGT+TGG - tig0045035:3523-3542 Msa1465210:intergenic 20.0%
!!! ATTGTAGATGTTTTGAAAAA+CGG + tig0045035:4729-4748 Msa1465210:CDS 20.0%
!! TCATAGTTCAAATATAGATA+TGG + tig0045035:5355-5374 Msa1465210:three_prime_UTR 20.0%
!!! CTTTTAATAAATGTTATGTG+AGG + tig0045035:5461-5480 Msa1465210:three_prime_UTR 20.0%
!! TGTTACTTGAAAGACAATTT+AGG - tig0045035:508-527 Msa0056160:intergenic 25.0%
! CTTTCAATTAAAACACCAAA+AGG - tig0045035:1004-1023 Msa1465210:intergenic 25.0%
! TGATGGAGAATTAAAAATTC+AGG + tig0045035:1048-1067 Msa1465210:intron 25.0%
!! ATGTTATGTTCCAATTTTGA+AGG + tig0045035:1085-1104 Msa1465210:intron 25.0%
!! TAAATTTTATAGGCAGTGTT+AGG - tig0045035:1500-1519 Msa1465210:intergenic 25.0%
!!! TATGTTACCCTTCTATTTTT+TGG + tig0045035:1518-1537 Msa1465210:intron 25.0%
!!! ATGTTACCCTTCTATTTTTT+GGG + tig0045035:1519-1538 Msa1465210:intron 25.0%
! TACAATCCCAAAAAATAGAA+GGG - tig0045035:1528-1547 Msa1465210:intergenic 25.0%
! ATACAATCCCAAAAAATAGA+AGG - tig0045035:1529-1548 Msa1465210:intergenic 25.0%
! GGATTGTATTATATAGTCTT+TGG + tig0045035:1540-1559 Msa1465210:intron 25.0%
! TTTCATTTGCTTCAATTCTA+AGG + tig0045035:1623-1642 Msa1465210:intron 25.0%
! ACACACTTCAAATTAAACAT+GGG - tig0045035:1663-1682 Msa1465210:intergenic 25.0%
! TACACACTTCAAATTAAACA+TGG - tig0045035:1664-1683 Msa1465210:intergenic 25.0%
!!! GTTTAATTTGAAGTGTGTAT+TGG + tig0045035:1665-1684 Msa1465210:intron 25.0%
! ATACATACTTGAACAAAGAA+TGG - tig0045035:1713-1732 Msa1465210:intergenic 25.0%
! AATTGAAAGATAACTGCAAA+AGG - tig0045035:2146-2165 Msa1465210:intergenic 25.0%
! GAATTAAAATGCACAAATAG+TGG - tig0045035:2191-2210 Msa1465210:intergenic 25.0%
! AACTTACAGAAGATAGAAAA+GGG - tig0045035:2213-2232 Msa1465210:intergenic 25.0%
!! GGATGCTTAAAGTTTAATTT+CGG + tig0045035:2489-2508 Msa1465210:intron 25.0%
! AGTAGATTTGACATATTGTT+TGG + tig0045035:2702-2721 Msa1465210:intron 25.0%
! TAATATAAGAGGAATCAAAG+AGG + tig0045035:3039-3058 Msa1465210:intron 25.0%
!!! ACGTCTATTTTATTTCTCTT+TGG - tig0045035:3221-3240 Msa1465210:intergenic 25.0%
! AAGAGAAATAAAATAGACGT+AGG + tig0045035:3221-3240 Msa1465210:intron 25.0%
! TAGAGAAGAAATAAGAAAGA+GGG - tig0045035:3330-3349 Msa1465210:intergenic 25.0%
! TTTGCAGAAATTCAAAATCA+CGG - tig0045035:3639-3658 Msa1465210:intergenic 25.0%
! AACAGTCGGAAAAAAATATA+TGG - tig0045035:3715-3734 Msa1465210:intergenic 25.0%
! TTTCATATGTCTGCAAAATA+AGG - tig0045035:4239-4258 Msa1465210:intergenic 25.0%
! TAATGATATTGAACAGCAAA+GGG + tig0045035:4500-4519 Msa1465210:CDS 25.0%
! TTCAAAACATCTACAATATC+TGG - tig0045035:4726-4745 Msa1465210:intergenic 25.0%
!! CTTATAAAGTTACTTTGTGA+AGG + tig0045035:4852-4871 Msa1465210:CDS 25.0%
! AGTTCAAATATAGATATGGT+CGG + tig0045035:5359-5378 Msa1465210:three_prime_UTR 25.0%
! TGAATGACATTTGTTCTTAA+AGG + tig0045035:5421-5440 Msa1465210:three_prime_UTR 25.0%
! GAATGACATTTGTTCTTAAA+GGG + tig0045035:5422-5441 Msa1465210:three_prime_UTR 25.0%
TTTAGGAAAGAGAGTGAAAT+TGG - tig0045035:491-510 Msa0056160:intergenic 30.0%
TGTGGTATAGAGTTGAAAAA+TGG - tig0045035:550-569 Msa0056160:intergenic 30.0%
AAGATGAGAAATTTGGATTG+TGG - tig0045035:568-587 Msa0056160:intergenic 30.0%
! TTTTTATCATTTCCCTCATC+TGG + tig0045035:586-605 Msa1465210:five_prime_UTR 30.0%
! TTTTATCATTTCCCTCATCT+GGG + tig0045035:587-606 Msa1465210:five_prime_UTR 30.0%
TGTTCAGATTTAAAAGGTGA+TGG - tig0045035:619-638 Msa1465210:intergenic 30.0%
!! GAGCTTTGTTCAGATTTAAA+AGG - tig0045035:625-644 Msa1465210:intergenic 30.0%
TTTCTACGTGTGTTTGAAAA+TGG + tig0045035:678-697 Msa1465210:exon 30.0%
TTCTACGTGTGTTTGAAAAT+GGG + tig0045035:679-698 Msa1465210:exon 30.0%
!! TTACAAACGTTTTGACATTC+CGG - tig0045035:775-794 Msa1465210:intergenic 30.0%
AACGTTTGTAAGAAGATGTA+TGG + tig0045035:784-803 Msa1465210:CDS 30.0%
ACGTTTGTAAGAAGATGTAT+GGG + tig0045035:785-804 Msa1465210:CDS 30.0%
! TTGAAGCTTTTGAATCTTTG+AGG + tig0045035:890-909 Msa1465210:CDS 30.0%
! TGAAGCTTTTGAATCTTTGA+GGG + tig0045035:891-910 Msa1465210:CDS 30.0%
!! TTATGTTCCAATTTTGAAGG+AGG + tig0045035:1088-1107 Msa1465210:intron 30.0%
AACATTACCTCCTTCAAAAT+TGG - tig0045035:1098-1117 Msa1465210:intergenic 30.0%
! GGAGGTAATGTTGATTATAA+AGG + tig0045035:1106-1125 Msa1465210:intron 30.0%
TAAAGTTATAATCAACTCGG+AGG - tig0045035:1186-1205 Msa1465210:intergenic 30.0%
!!! AGATGCAAATGCATTGATTT+TGG + tig0045035:1420-1439 Msa1465210:intron 30.0%
!!! GATGCAAATGCATTGATTTT+GGG + tig0045035:1421-1440 Msa1465210:intron 30.0%
AAATATTCAAGCTCAATTGC+AGG + tig0045035:1737-1756 Msa1465210:intron 30.0%
ACAACACCAATTTAAGCAAT+CGG - tig0045035:1768-1787 Msa1465210:intergenic 30.0%
AGAACACATGTTTCAAATTC+AGG - tig0045035:1793-1812 Msa1465210:intergenic 30.0%
! ATGTAATAAAGAGTATGGTG+AGG + tig0045035:1931-1950 Msa1465210:intron 30.0%
CAACTTACAGAAGATAGAAA+AGG - tig0045035:2214-2233 Msa1465210:intergenic 30.0%
TTTCTATCTTCTGTAAGTTG+CGG + tig0045035:2214-2233 Msa1465210:intron 30.0%
TGTCGTATGTATCAAACATA+TGG + tig0045035:2296-2315 Msa1465210:intron 30.0%
TCTCTAATCTGCAAAGTTAA+CGG + tig0045035:2435-2454 Msa1465210:intron 30.0%
! AAAAGTGTATTCCTGAAATC+AGG + tig0045035:2518-2537 Msa1465210:intron 30.0%
TGAAAGAAAAAAACTTGCAC+AGG - tig0045035:2549-2568 Msa1465210:intergenic 30.0%
ACTAGCTGAATATTTCAATG+TGG + tig0045035:2583-2602 Msa1465210:intron 30.0%
TCAATGTGGATAAATGTCTA+AGG + tig0045035:2597-2616 Msa1465210:intron 30.0%
CAATGTGGATAAATGTCTAA+GGG + tig0045035:2598-2617 Msa1465210:intron 30.0%
! AAGTATGTAAGAGAGAGTAT+AGG + tig0045035:2655-2674 Msa1465210:intron 30.0%
! TATATCACCATGGACAATTT+TGG + tig0045035:3151-3170 Msa1465210:intron 30.0%
GGTTTAAAAGAGAGATTGAA+GGG - tig0045035:3267-3286 Msa1465210:intergenic 30.0%
TGGTTTAAAAGAGAGATTGA+AGG - tig0045035:3268-3287 Msa1465210:intergenic 30.0%
! ATCTCTCTTTTAAACCAAAC+AGG + tig0045035:3271-3290 Msa1465210:intron 30.0%
GTAGAGAAGAAATAAGAAAG+AGG - tig0045035:3331-3350 Msa1465210:intergenic 30.0%
TACCAAACATAGTGTAAAAG+AGG + tig0045035:3348-3367 Msa1465210:intron 30.0%
ACCAAACATAGTGTAAAAGA+GGG + tig0045035:3349-3368 Msa1465210:intron 30.0%
! TATTTGTTGGAACTTATCTG+CGG - tig0045035:3510-3529 Msa1465210:intergenic 30.0%
CTGAAAGAGATTAAAACAGT+CGG - tig0045035:3729-3748 Msa1465210:intergenic 30.0%
!! GTCTTTCAGTTTTCTAAGAA+GGG - tig0045035:3996-4015 Msa1465210:intergenic 30.0%
!! AGTCTTTCAGTTTTCTAAGA+AGG - tig0045035:3997-4016 Msa1465210:intergenic 30.0%
AGAATGTTTCAATTAAGCAC+CGG + tig0045035:4059-4078 Msa1465210:CDS 30.0%
ATATGTCTGCAAAATAAGGT+AGG - tig0045035:4235-4254 Msa1465210:intergenic 30.0%
AAAGATCCTGCATTCAAAAA+TGG + tig0045035:4256-4275 Msa1465210:CDS 30.0%
! AACTGCTATCAAAGCTTTAT+TGG + tig0045035:4464-4483 Msa1465210:CDS 30.0%
GTAATGATATTGAACAGCAA+AGG + tig0045035:4499-4518 Msa1465210:CDS 30.0%
AAAGTAACTTTATAAGAGCC+GGG - tig0045035:4848-4867 Msa1465210:intergenic 30.0%
CAAAGTAACTTTATAAGAGC+CGG - tig0045035:4849-4868 Msa1465210:intergenic 30.0%
TCCTTTGATACGATTTATGA+AGG + tig0045035:4971-4990 Msa1465210:CDS 30.0%
TCCTTCATAAATCGTATCAA+AGG - tig0045035:4975-4994 Msa1465210:intergenic 30.0%
GTATAACCTCAACTAAAATG+GGG - tig0045035:5094-5113 Msa1465210:intergenic 30.0%
CGTATAACCTCAACTAAAAT+GGG - tig0045035:5095-5114 Msa1465210:intergenic 30.0%
TCGTATAACCTCAACTAAAA+TGG - tig0045035:5096-5115 Msa1465210:intergenic 30.0%
ATAATAAAGTTACACTCGAG+AGG - tig0045035:5335-5354 Msa1465210:intergenic 30.0%
ACACACGTAGAAAAAGTCAA+AGG - tig0045035:671-690 Msa1465210:intergenic 35.0%
ATTCAATCAGGGAGATTTCT+GGG + tig0045035:746-765 Msa1465210:CDS 35.0%
! TGTATGGGAATTTGATTCGT+AGG + tig0045035:800-819 Msa1465210:CDS 35.0%
! GTATGGGAATTTGATTCGTA+GGG + tig0045035:801-820 Msa1465210:CDS 35.0%
! TCCTTTGTTTGAGGAATTGA+AGG + tig0045035:837-856 Msa1465210:CDS 35.0%
TCCTTCAATTCCTCAAACAA+AGG - tig0045035:841-860 Msa1465210:intergenic 35.0%
GAACATGTTCACGTAAAAGT+GGG - tig0045035:1277-1296 Msa1465210:intergenic 35.0%
TGAACATGTTCACGTAAAAG+TGG - tig0045035:1278-1297 Msa1465210:intergenic 35.0%
TGACTTTGAACGAGTTTACT+GGG - tig0045035:1350-1369 Msa1465210:intergenic 35.0%
TTGACTTTGAACGAGTTTAC+TGG - tig0045035:1351-1370 Msa1465210:intergenic 35.0%
TAACAGATAAAGCGAGTGTT+TGG - tig0045035:1393-1412 Msa1465210:intergenic 35.0%
CTCGCTTTATCTGTTATAGT+AGG + tig0045035:1397-1416 Msa1465210:intron 35.0%
! TTTTCTCCATATGCAGAGAA+AGG - tig0045035:1602-1621 Msa1465210:intergenic 35.0%
CAACACCAATTTAAGCAATC+GGG - tig0045035:1767-1786 Msa1465210:intergenic 35.0%
GGTCTCTATCATTAAGCAAT+TGG - tig0045035:1878-1897 Msa1465210:intergenic 35.0%
! AAGAGTATGGTGAGGTTATA+TGG + tig0045035:1939-1958 Msa1465210:intron 35.0%
GATTTGATAGGATGCTTAGT+TGG + tig0045035:1970-1989 Msa1465210:intron 35.0%
CCTCACTGTTTATACTACTA+AGG - tig0045035:2009-2028 Msa1465210:intergenic 35.0%
CCTTAGTAGTATAAACAGTG+AGG + tig0045035:2006-2025 Msa1465210:intron 35.0%
TAGTAGTATAAACAGTGAGG+TGG + tig0045035:2009-2028 Msa1465210:intron 35.0%
AGTAGTATAAACAGTGAGGT+GGG + tig0045035:2010-2029 Msa1465210:intron 35.0%
GATTATTGCTAGGACCATTA+TGG + tig0045035:2054-2073 Msa1465210:intron 35.0%
CTTTCTTTGCCTAACCATAA+TGG - tig0045035:2071-2090 Msa1465210:intergenic 35.0%
! AGAGTGTTCTCTTTCTTTGA+AGG + tig0045035:2089-2108 Msa1465210:intron 35.0%
!! TTCTTTGAAGGAGTTTTGCT+CGG + tig0045035:2101-2120 Msa1465210:intron 35.0%
TAAGATTCATTGAAAGTCGC+AGG - tig0045035:2355-2374 Msa1465210:intergenic 35.0%
GCGACTTTCAATGAATCTTA+AGG + tig0045035:2355-2374 Msa1465210:intron 35.0%
AGAAAAACTGATGACCACAT+TGG - tig0045035:2413-2432 Msa1465210:intergenic 35.0%
AACCTATGAGCTGAATAGAA+TGG + tig0045035:2468-2487 Msa1465210:intron 35.0%
ATCCATTCTATTCAGCTCAT+AGG - tig0045035:2473-2492 Msa1465210:intergenic 35.0%
! TAAATGTCTAAGGGTGTGTT+TGG + tig0045035:2607-2626 Msa1465210:intron 35.0%
! CTCTTTTCCAAAATTGTCCA+TGG - tig0045035:3161-3180 Msa1465210:intergenic 35.0%
! CTTTTAAACCAAACAGGAGA+AGG + tig0045035:3277-3296 Msa1465210:intron 35.0%
! TCCCTCTTTTACACTATGTT+TGG - tig0045035:3353-3372 Msa1465210:intergenic 35.0%
TTCAGATGCTATATGCTTTC+TGG + tig0045035:3385-3404 Msa1465210:intron 35.0%
!! ATGCTATATGCTTTCTGGTT+CGG + tig0045035:3390-3409 Msa1465210:intron 35.0%
!!! TTCGGTTTTGTTTACCAAAC+AGG + tig0045035:3408-3427 Msa1465210:intron 35.0%
!! ATTGTTGCTTTACATGTCAC+AGG + tig0045035:3466-3485 Msa1465210:intron 35.0%
CAACAAACTTGAGATATCAG+AGG + tig0045035:3568-3587 Msa1465210:CDS 35.0%
!!! CTGTTTTTGCCAAGGTTAAA+GGG + tig0045035:3662-3681 Msa1465210:intron 35.0%
AGCAAATTCTGTTTGAGCTT+TGG - tig0045035:3783-3802 Msa1465210:intergenic 35.0%
!! TGCTGATTTACAACTAGACT+TGG + tig0045035:3799-3818 Msa1465210:CDS 35.0%
!! TTTTGAGTATAGCAGGATCA+GGG - tig0045035:3853-3872 Msa1465210:intergenic 35.0%
TTAGATCATTCATAGTCCTC+AGG - tig0045035:3895-3914 Msa1465210:intergenic 35.0%
GAATTGGTCATAACAAGCAA+CGG + tig0045035:3938-3957 Msa1465210:CDS 35.0%
!! TTTTCTAAGAAGGGATGAGA+CGG - tig0045035:3987-4006 Msa1465210:intergenic 35.0%
TGAAACATTCTCGTTCTCAT+AGG - tig0045035:4050-4069 Msa1465210:intergenic 35.0%
! CTGTAATCCCAGATGATTTT+CGG + tig0045035:4086-4105 Msa1465210:CDS 35.0%
TTCATCAGTTCGAGAGATAT+AGG - tig0045035:4115-4134 Msa1465210:intergenic 35.0%
GAACAATGTTTCGCACAAAA+AGG - tig0045035:4180-4199 Msa1465210:intergenic 35.0%
!!! ATCAAGCCATTTTTGAATGC+AGG - tig0045035:4265-4284 Msa1465210:intergenic 35.0%
ATTCAAAAATGGCTTGATGC+TGG + tig0045035:4267-4286 Msa1465210:CDS 35.0%
!! AAAGTGTCTGCTGTGTTTTA+GGG - tig0045035:4305-4324 Msa1465210:intergenic 35.0%
!!! AAAAGTGTCTGCTGTGTTTT+AGG - tig0045035:4306-4325 Msa1465210:intergenic 35.0%
CAAAACGTAGTTAGGAGTAA+GGG - tig0045035:4337-4356 Msa1465210:intergenic 35.0%
TCAAAACGTAGTTAGGAGTA+AGG - tig0045035:4338-4357 Msa1465210:intergenic 35.0%
AGACTCTTCAAAACGTAGTT+AGG - tig0045035:4345-4364 Msa1465210:intergenic 35.0%
!!! TACGTTTTGAAGAGTCTGAT+TGG + tig0045035:4348-4367 Msa1465210:CDS 35.0%
!! TGAAGAGTCTGATTGGTTTA+TGG + tig0045035:4355-4374 Msa1465210:CDS 35.0%
TTGAACTACCAAAGAAGCAA+GGG + tig0045035:4394-4413 Msa1465210:CDS 35.0%
AGTTGCAGAACAAAGAAATC+TGG + tig0045035:4417-4436 Msa1465210:CDS 35.0%
AAAGGAACTATAGTAAACGC+AGG + tig0045035:4693-4712 Msa1465210:CDS 35.0%
!!! TGTTTTGAAAAACGGAAGCA+TGG + tig0045035:4737-4756 Msa1465210:CDS 35.0%
GATACGATTTATGAAGGATG+CGG + tig0045035:4977-4996 Msa1465210:CDS 35.0%
ATACGATTTATGAAGGATGC+GGG + tig0045035:4978-4997 Msa1465210:CDS 35.0%
TTAGTTGAGGTTATACGAAC+CGG + tig0045035:5098-5117 Msa1465210:CDS 35.0%
ACTGCAATTGAAACTAGCAA+AGG + tig0045035:5181-5200 Msa1465210:CDS 35.0%
TTGAAACTAGCAAAGGAACA+TGG + tig0045035:5188-5207 Msa1465210:CDS 35.0%
CTTCAGGGATTATCAGAAAA+TGG + tig0045035:5224-5243 Msa1465210:CDS 35.0%
GTTGCGTTAGAACGTAGAAA+TGG - tig0045035:446-465 Msa0056160:intergenic 40.0%
TACGTGTGTTTGAAAATGGG+TGG + tig0045035:682-701 Msa1465210:exon 40.0%
ACGTGTGTTTGAAAATGGGT+GGG + tig0045035:683-702 Msa1465210:exon 40.0%
AATCCAAAGGCTATGGTTGT+GGG + tig0045035:712-731 Msa1465210:CDS 40.0%
! TCGTTTGGCTGATTCAATCA+GGG + tig0045035:735-754 Msa1465210:CDS 40.0%
GATTCAATCAGGGAGATTTC+TGG + tig0045035:745-764 Msa1465210:CDS 40.0%
!! GCTTTTGAGTCCTTTGTTTG+AGG + tig0045035:828-847 Msa1465210:CDS 40.0%
AAGGATTGTGATGAGTCTCT+TGG + tig0045035:856-875 Msa1465210:CDS 40.0%
! TGAATCTTTGAGGGTTGCTT+TGG + tig0045035:900-919 Msa1465210:CDS 40.0%
TTCTCAAGTCCGTGAATCAT+GGG + tig0045035:938-957 Msa1465210:CDS 40.0%
AAGCTTACTCCCATGATTCA+CGG - tig0045035:950-969 Msa1465210:intergenic 40.0%
! TCATGGGAGTAAGCTTTATC+AGG + tig0045035:954-973 Msa1465210:CDS 40.0%
!! AAAGCGAGTGTTTGGTTCTA+CGG - tig0045035:1385-1404 Msa1465210:intergenic 40.0%
! AAGGTACAGGTAGAAAGCAT+TGG - tig0045035:1583-1602 Msa1465210:intergenic 40.0%
GAACACCCGATTGCTTAAAT+TGG + tig0045035:1759-1778 Msa1465210:intron 40.0%
ATGATAGAGACCTGAATGTG+AGG + tig0045035:1886-1905 Msa1465210:intron 40.0%
TGATAGAGACCTGAATGTGA+GGG + tig0045035:1887-1906 Msa1465210:intron 40.0%
ATGTGAGGGATAAGGGAAAA+AGG + tig0045035:1901-1920 Msa1465210:intron 40.0%
TGTGAGGGATAAGGGAAAAA+GGG + tig0045035:1902-1921 Msa1465210:intron 40.0%
TGAGGTGGGTAAGTTGTAAT+GGG + tig0045035:2024-2043 Msa1465210:intron 40.0%
TTGCTAGGACCATTATGGTT+AGG + tig0045035:2059-2078 Msa1465210:intron 40.0%
TGAACGCACACTTCAAATTC+AGG - tig0045035:2276-2295 Msa1465210:intergenic 40.0%
TTCTTCATGCATGACCAATG+TGG + tig0045035:2396-2415 Msa1465210:intron 40.0%
GAAAAAAACTTGCACAGGAC+AGG - tig0045035:2544-2563 Msa1465210:intergenic 40.0%
! TCTAAGGGTGTGTTTGGTAT+AGG + tig0045035:2613-2632 Msa1465210:intron 40.0%
AGGGAGAGACCAAATATTGT+GGG - tig0045035:3248-3267 Msa1465210:intergenic 40.0%
AAGGGAGAGACCAAATATTG+TGG - tig0045035:3249-3268 Msa1465210:intergenic 40.0%
GAGCAACTAAGATACCTGTT+TGG - tig0045035:3425-3444 Msa1465210:intergenic 40.0%
TTTACATGTCACAGGCTTTG+CGG + tig0045035:3474-3493 Msa1465210:intron 40.0%
ATCAGAGGAAGTTCAAGAAC+AGG + tig0045035:3583-3602 Msa1465210:CDS 40.0%
!!! GCTGTTTTTGCCAAGGTTAA+AGG + tig0045035:3661-3680 Msa1465210:intron 40.0%
TTGATGCTTCCCTTTAACCT+TGG - tig0045035:3674-3693 Msa1465210:intergenic 40.0%
!! CTTTTGAGTATAGCAGGATC+AGG - tig0045035:3854-3873 Msa1465210:intergenic 40.0%
!! GAGAGTCTTTTGAGTATAGC+AGG - tig0045035:3860-3879 Msa1465210:intergenic 40.0%
GTCCACTGAATTACACGAAT+TGG + tig0045035:3922-3941 Msa1465210:CDS 40.0%
GACCAATTCGTGTAATTCAG+TGG - tig0045035:3927-3946 Msa1465210:intergenic 40.0%
ATAACAAGCAACGGAGAACT+AGG + tig0045035:3947-3966 Msa1465210:CDS 40.0%
TTCTCATAGGTATCAACCTC+AGG - tig0045035:4037-4056 Msa1465210:intergenic 40.0%
! CGAAAATCATCTGGGATTAC+AGG - tig0045035:4088-4107 Msa1465210:intergenic 40.0%
TAGGACACCGAAAATCATCT+GGG - tig0045035:4096-4115 Msa1465210:intergenic 40.0%
ATAGGACACCGAAAATCATC+TGG - tig0045035:4097-4116 Msa1465210:intergenic 40.0%
GATTGTGGATAATACCTGAC+CGG - tig0045035:4158-4177 Msa1465210:intergenic 40.0%
GTTTCGCACAAAAAGGATTG+TGG - tig0045035:4173-4192 Msa1465210:intergenic 40.0%
TGTGCGAAACATTGTTCTGA+TGG + tig0045035:4183-4202 Msa1465210:intron 40.0%
GGTTTATGGTGTGATAGCAA+TGG + tig0045035:4369-4388 Msa1465210:CDS 40.0%
GTTGAACTACCAAAGAAGCA+AGG + tig0045035:4393-4412 Msa1465210:CDS 40.0%
TCTGTCACAATCTGAAAGAC+TGG - tig0045035:4445-4464 Msa1465210:intergenic 40.0%
TGATATTGAACAGCAAAGGG+CGG + tig0045035:4503-4522 Msa1465210:CDS 40.0%
TCGGTTATCTGCATTTCTCT+TGG - tig0045035:4553-4572 Msa1465210:intergenic 40.0%
TCCATCAACGAGAGTAACAA+AGG + tig0045035:4675-4694 Msa1465210:CDS 40.0%
TCCTTTGTTACTCTCGTTGA+TGG - tig0045035:4679-4698 Msa1465210:intergenic 40.0%
! TTTGAAAAACGGAAGCATGG+AGG + tig0045035:4740-4759 Msa1465210:CDS 40.0%
GACGAGAACAAAGTTGCAAT+AGG + tig0045035:4807-4826 Msa1465210:CDS 40.0%
TAACTTTATAAGAGCCGGGA+TGG - tig0045035:4844-4863 Msa1465210:intergenic 40.0%
AAAGCTAGAGCTGTTAAAGC+CGG + tig0045035:4939-4958 Msa1465210:CDS 40.0%
TATCAAAGGAGCAACTATCC+CGG - tig0045035:4961-4980 Msa1465210:intergenic 40.0%
GCTATAATGACAATCCTTGC+AGG + tig0045035:5026-5045 Msa1465210:CDS 40.0%
!! AACTAAAATGGGGATTGGCT+CGG - tig0045035:5084-5103 Msa1465210:intergenic 40.0%
ACCTCAACTAAAATGGGGAT+TGG - tig0045035:5089-5108 Msa1465210:intergenic 40.0%
!! TGTTTTGTGGTTGGTATGCA+CGG + tig0045035:5151-5170 Msa1465210:CDS 40.0%
GATAGAGCTAAGAGAAAAGC+TGG + tig0045035:5251-5270 Msa1465210:CDS 40.0%
GATGGAGAATACCCAGATGA+GGG - tig0045035:601-620 Msa1465210:intergenic 45.0%
TGATGGAGAATACCCAGATG+AGG - tig0045035:602-621 Msa1465210:intergenic 45.0%
GAATCCAAAGGCTATGGTTG+TGG + tig0045035:711-730 Msa1465210:CDS 45.0%
! GTCGTTTGGCTGATTCAATC+AGG + tig0045035:734-753 Msa1465210:CDS 45.0%
CTTCTCAAGTCCGTGAATCA+TGG + tig0045035:937-956 Msa1465210:CDS 45.0%
! CCATATGCAGAGAAAGGTAC+AGG - tig0045035:1596-1615 Msa1465210:intergenic 45.0%
CCTGTACCTTTCTCTGCATA+TGG + tig0045035:1593-1612 Msa1465210:intron 45.0%
AGACCTGAATGTGAGGGATA+AGG + tig0045035:1893-1912 Msa1465210:intron 45.0%
GACCTGAATGTGAGGGATAA+GGG + tig0045035:1894-1913 Msa1465210:intron 45.0%
TTCCCTTATCCCTCACATTC+AGG - tig0045035:1899-1918 Msa1465210:intergenic 45.0%
GTGAGGGATAAGGGAAAAAG+GGG + tig0045035:1903-1922 Msa1465210:intron 45.0%
GTGAGGTGGGTAAGTTGTAA+TGG + tig0045035:2023-2042 Msa1465210:intron 45.0%
GGGAATGCGAGATTATTGCT+AGG + tig0045035:2044-2063 Msa1465210:intron 45.0%
! TTTGAAGGAGTTTTGCTCGG+TGG + tig0045035:2104-2123 Msa1465210:intron 45.0%
! TTGAAGGAGTTTTGCTCGGT+GGG + tig0045035:2105-2124 Msa1465210:intron 45.0%
CAGGCAAGCAACACTTAAGT+TGG + tig0045035:2242-2261 Msa1465210:intron 45.0%
CTGCAAAGTTAACGGTGCAT+AGG + tig0045035:2443-2462 Msa1465210:intron 45.0%
CCTTCTACTCCATTTCTTCG+CGG + tig0045035:3193-3212 Msa1465210:intron 45.0%
!! TCTTTGGAACCGCGAAGAAA+TGG - tig0045035:3205-3224 Msa1465210:intergenic 45.0%
GACGTAGGTCCCACAATATT+TGG + tig0045035:3236-3255 Msa1465210:intron 45.0%
GATAAGCTCCTTCTCCTGTT+TGG - tig0045035:3288-3307 Msa1465210:intergenic 45.0%
GAAAGAGGGAAGAGAGAAGT+TGG - tig0045035:3316-3335 Msa1465210:intergenic 45.0%
GATCCTGTAATCGTCTCAAC+CGG + tig0045035:4136-4155 Msa1465210:CDS 45.0%
CTGCTTCGGCAATACATACT+CGG - tig0045035:4572-4591 Msa1465210:intergenic 45.0%
GACAACAAGTCTACGAGAAG+CGG - tig0045035:4603-4622 Msa1465210:intergenic 45.0%
AAAGTTGCAATAGGTGCAGC+AGG + tig0045035:4816-4835 Msa1465210:CDS 45.0%
!! CTTTGTGAAGGTACTCCAAG+AGG + tig0045035:4864-4883 Msa1465210:CDS 45.0%
!!! GCTGCATCTTTTTTGCCTCT+TGG - tig0045035:4882-4901 Msa1465210:intergenic 45.0%
AAGCTAGAGCTGTTAAAGCC+GGG + tig0045035:4940-4959 Msa1465210:CDS 45.0%
TTGCTGTCCTTCCTTCATGA+TGG - tig0045035:5052-5071 Msa1465210:intergenic 45.0%
CATGAAGGAAGGACAGCAAT+TGG + tig0045035:5053-5072 Msa1465210:CDS 45.0%
!!! GCCAATCCCCATTTTAGTTG+AGG + tig0045035:5085-5104 Msa1465210:CDS 45.0%
AAACAGCAGCAGCATTCTCA+CGG - tig0045035:5136-5155 Msa1465210:intergenic 45.0%
!!! AGAATGCTGCTGCTGTTTTG+TGG + tig0045035:5138-5157 Msa1465210:CDS 45.0%
!! GTTTTGTGGTTGGTATGCAC+GGG + tig0045035:5152-5171 Msa1465210:CDS 45.0%
AACTGTTGCAGCGAATCGAA+GGG + tig0045035:5285-5304 Msa1465210:CDS 45.0%
AAAGTTACACTCGAGAGGCT+AGG - tig0045035:5330-5349 Msa1465210:intergenic 45.0%
!!! TTTAAAATTTTATAATTTAG+TGG + tig0045035:2945-2964 Msa1465210:intron 5.0%
!!! TTAAAATTTTATAATTTAGT+GGG + tig0045035:2946-2965 Msa1465210:intron 5.0%
!! TTTATTTATTATAATATAAG+AGG + tig0045035:3028-3047 Msa1465210:intron 5.0%
GAGCGAGAATCCAAAGGCTA+TGG + tig0045035:705-724 Msa1465210:CDS 50.0%
!! AGTTTTGCTCGGTGGGCATT+AGG + tig0045035:2112-2131 Msa1465210:intron 50.0%
TCTGTAAGTTGCGGCGATTC+AGG + tig0045035:2223-2242 Msa1465210:intron 50.0%
CCGCGAAGAAATGGAGTAGA+AGG - tig0045035:3196-3215 Msa1465210:intergenic 50.0%
!!! GCAAAGCGCTGTTTTTGCCA+AGG + tig0045035:3654-3673 Msa1465210:intron 50.0%
TCTCAGAGAAGTTGCACCTG+AGG + tig0045035:3876-3895 Msa1465210:CDS 50.0%
! CATCTGGGATTACAGGAGAC+CGG - tig0045035:4081-4100 Msa1465210:intergenic 50.0%
TGACCGGTTGAGACGATTAC+AGG - tig0045035:4142-4161 Msa1465210:intergenic 50.0%
TGTAATCGTCTCAACCGGTC+AGG + tig0045035:4141-4160 Msa1465210:CDS 50.0%
!!! TGTCTGCTGTGTTTTAGGGC+AGG - tig0045035:4301-4320 Msa1465210:intergenic 50.0%
CTGCAACTCCCTTGCTTCTT+TGG - tig0045035:4405-4424 Msa1465210:intergenic 50.0%
CATTTCTCTTGGCCAGCAAC+CGG - tig0045035:4542-4561 Msa1465210:intergenic 50.0%
CGAGTATGTATTGCCGAAGC+AGG + tig0045035:4570-4589 Msa1465210:CDS 50.0%
AAGCGGTATTGCTCCTGCTT+CGG - tig0045035:4586-4605 Msa1465210:intergenic 50.0%
TTCCACAGATCCTCGAACTC+AGG + tig0045035:4623-4642 Msa1465210:CDS 50.0%
CATGGAGGCAAGAGAAAACG+CGG + tig0045035:4755-4774 Msa1465210:CDS 50.0%
CGATTTATGAAGGATGCGGG+CGG + tig0045035:4981-5000 Msa1465210:CDS 50.0%
ATCCTTGCAGGCCATCATGA+AGG + tig0045035:5038-5057 Msa1465210:CDS 50.0%
TTCCTTCATGATGGCCTGCA+AGG - tig0045035:5043-5062 Msa1465210:intergenic 50.0%
TTGCAGGCCATCATGAAGGA+AGG + tig0045035:5042-5061 Msa1465210:CDS 50.0%
AGGAAGGACAGCAATTGGTC+AGG + tig0045035:5058-5077 Msa1465210:CDS 50.0%
!!! TGCTGCTGCTGTTTTGTGGT+TGG + tig0045035:5142-5161 Msa1465210:CDS 50.0%
!! TGGAGCAGAAGAAGCACTTC+AGG + tig0045035:5208-5227 Msa1465210:CDS 50.0%
!! GGAGCAGAAGAAGCACTTCA+GGG + tig0045035:5209-5228 Msa1465210:CDS 50.0%
GAACTGTTGCAGCGAATCGA+AGG + tig0045035:5284-5303 Msa1465210:CDS 50.0%
ACTGTTGCAGCGAATCGAAG+GGG + tig0045035:5286-5305 Msa1465210:CDS 50.0%
CGACCCACAACCATAGCCTT+TGG - tig0045035:718-737 Msa1465210:intergenic 55.0%
GGCTATGGTTGTGGGTCGTT+TGG + tig0045035:720-739 Msa1465210:CDS 55.0%
! CAGGGAGATTTCTGGGTTGC+CGG + tig0045035:753-772 Msa1465210:CDS 55.0%
CACAGGACAGGCCTGATTTC+AGG - tig0045035:2532-2551 Msa1465210:intergenic 55.0%
ACATGTCACAGGCTTTGCGG+AGG + tig0045035:3477-3496 Msa1465210:intron 55.0%
CGTGCTCGCAGAAAATCCTG+AGG + tig0045035:4018-4037 Msa1465210:CDS 55.0%
CTCCTGAGTTCGAGGATCTG+TGG - tig0045035:4628-4647 Msa1465210:intergenic 55.0%
! TCCTCGAACTCAGGAGCATG+CGG + tig0045035:4632-4651 Msa1465210:CDS 55.0%
TTTATGAAGGATGCGGGCGG+TGG + tig0045035:4984-5003 Msa1465210:CDS 55.0%
TTATGAAGGATGCGGGCGGT+GGG + tig0045035:4985-5004 Msa1465210:CDS 55.0%
GGGTGGGAGCGAGAATCCAA+AGG + tig0045035:699-718 Msa1465210:CDS 60.0%
ACCGCATGCTCCTGAGTTCG+AGG - tig0045035:4636-4655 Msa1465210:intergenic 60.0%
CTCACGGTTGCGTGGTGATC+CGG - tig0045035:5120-5139 Msa1465210:intergenic 60.0%
GCAGCATTCTCACGGTTGCG+TGG - tig0045035:5128-5147 Msa1465210:intergenic 60.0%
GTTGCAGCGAATCGAAGGGG+AGG + tig0045035:5289-5308 Msa1465210:CDS 60.0%
GAACAGCAAAGGGCGGCTGC+TGG + tig0045035:4510-4529 Msa1465210:CDS 65.0%
TGCTGGTGAGCTCCGGTTGC+TGG + tig0045035:4527-4546 Msa1465210:CDS 65.0%
AGGTGCAGCAGGAGCCATCC+CGG + tig0045035:4827-4846 Msa1465210:CDS 65.0%
GAAGGATGCGGGCGGTGGGA+TGG + tig0045035:4989-5008 Msa1465210:CDS 70.0%
GGGCGGCTGCTGGTGAGCTC+CGG + tig0045035:4520-4539 Msa1465210:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0045035 gene 431 5552 431 ID=Msa1465210;Name=Msa1465210
tig0045035 mRNA 431 5552 431 ID=Msa1465210-mRNA-1;Parent=Msa1465210;Name=Msa1465210-mRNA-1;_AED=0.04;_eAED=0.04;_QI=266|1|1|1|1|1|4|221|630
tig0045035 exon 431 975 431 ID=Msa1465210-mRNA-1:exon:24724;Parent=Msa1465210-mRNA-1
tig0045035 exon 3488 3604 3488 ID=Msa1465210-mRNA-1:exon:24725;Parent=Msa1465210-mRNA-1
tig0045035 exon 3749 4162 3749 ID=Msa1465210-mRNA-1:exon:24726;Parent=Msa1465210-mRNA-1
tig0045035 exon 4249 5552 4249 ID=Msa1465210-mRNA-1:exon:24727;Parent=Msa1465210-mRNA-1
tig0045035 five_prime_UTR 431 696 431 ID=Msa1465210-mRNA-1:five_prime_utr;Parent=Msa1465210-mRNA-1
tig0045035 CDS 697 975 697 ID=Msa1465210-mRNA-1:cds;Parent=Msa1465210-mRNA-1
tig0045035 CDS 3488 3604 3488 ID=Msa1465210-mRNA-1:cds;Parent=Msa1465210-mRNA-1
tig0045035 CDS 3749 4162 3749 ID=Msa1465210-mRNA-1:cds;Parent=Msa1465210-mRNA-1
tig0045035 CDS 4249 5331 4249 ID=Msa1465210-mRNA-1:cds;Parent=Msa1465210-mRNA-1
tig0045035 three_prime_UTR 5332 5552 5332 ID=Msa1465210-mRNA-1:three_prime_utr;Parent=Msa1465210-mRNA-1
Gene Sequence

>Msa1465210

ATGGGTGGGAGCGAGAATCCAAAGGCTATGGTTGTGGGTCGTTTGGCTGATTCAATCAGGGAGATTTCTGGGTTGCCGGAATGTCAAAACGTTTGTAAGAAGATGTATGGGAATTTGATTCGTAGGGTGAAGCTTTTGAGTCCTTTGTTTGAGGAATTGAAGGATTGTGATGAGTCTCTTGGTGATCAAGAGATTGAAGCTTTTGAATCTTTGAGGGTTGCTTTGGATTTGACTATGATTCTTCTCAAGTCCGTGAATCATGGGAGTAAGCTTTATCAGGCTTTGCGGAGGAATGATACCGCAGATAAGTTCCAACAAATAACTGAAAAAATTGAAGCTGCATTGAGTGATATTTCATACAACAAACTTGAGATATCAGAGGAAGTTCAAGAACAGATTGAACTAGTGCACGCTCAGTTCAAAAGAGCCAAAGCTCAAACAGAATTTGCTGATTTACAACTAGACTTGGATATAGCAGTAGCACAGAAAGATAAAGACCCTGATCCTGCTATACTCAAAAGACTCTCAGAGAAGTTGCACCTGAGGACTATGAATGATCTAAAGAAAGAGTCCACTGAATTACACGAATTGGTCATAACAAGCAACGGAGAACTAGGAGACAGTTTTGAAACCGTCTCATCCCTTCTTAGAAAACTGAAAGACTGCGTGCTCGCAGAAAATCCTGAGGTTGATACCTATGAGAACGAGAATGTTTCAATTAAGCACCGGTCTCCTGTAATCCCAGATGATTTTCGGTGTCCTATATCTCTCGAACTGATGAAAGATCCTGTAATCGTCTCAACCGGTCAGACATATGAAAGATCCTGCATTCAAAAATGGCTTGATGCTGGTCACAGAACCTGCCCTAAAACACAGCAGACACTTTTGCATACAGCCCTTACTCCTAACTACGTTTTGAAGAGTCTGATTGGTTTATGGTGTGATAGCAATGGTGTTGAACTACCAAAGAAGCAAGGGAGTTGCAGAACAAAGAAATCTGGAACCAGTCTTTCAGATTGTGACAGAACTGCTATCAAAGCTTTATTGGATAAGCTAACAAGTAATGATATTGAACAGCAAAGGGCGGCTGCTGGTGAGCTCCGGTTGCTGGCCAAGAGAAATGCAGATAACCGAGTATGTATTGCCGAAGCAGGAGCAATACCGCTTCTCGTAGACTTGTTGTCTTCCACAGATCCTCGAACTCAGGAGCATGCGGTTACAGCACTTCTGAATCTTTCCATCAACGAGAGTAACAAAGGAACTATAGTAAACGCAGGAGCTATACCAGATATTGTAGATGTTTTGAAAAACGGAAGCATGGAGGCAAGAGAAAACGCGGCTGCGACTCTCTTTAGTTTATCAGTTCTTGACGAGAACAAAGTTGCAATAGGTGCAGCAGGAGCCATCCCGGCTCTTATAAAGTTACTTTGTGAAGGTACTCCAAGAGGCAAAAAAGATGCAGCTACTGCTATATTTAATCTATGTATTTATCAAGGAAACAAAGCTAGAGCTGTTAAAGCCGGGATAGTTGCTCCTTTGATACGATTTATGAAGGATGCGGGCGGTGGGATGGTTGACGAAGCACTAGCTATAATGACAATCCTTGCAGGCCATCATGAAGGAAGGACAGCAATTGGTCAGGCCGAGCCAATCCCCATTTTAGTTGAGGTTATACGAACCGGATCACCACGCAACCGTGAGAATGCTGCTGCTGTTTTGTGGTTGGTATGCACGGGAGATCTACTGCAATTGAAACTAGCAAAGGAACATGGAGCAGAAGAAGCACTTCAGGGATTATCAGAAAATGGAACTGATAGAGCTAAGAGAAAAGCTGGAAGTATATTAGAACTGTTGCAGCGAATCGAAGGGGAGGATAGTTTGCAAAATACCTAG
Protein sequence

>Msa1465210

MGGSENPKAMVVGRLADSIREISGLPECQNVCKKMYGNLIRRVKLLSPLFEELKDCDESLGDQEIEAFESLRVALDLTMILLKSVNHGSKLYQALRRNDTADKFQQITEKIEAALSDISYNKLEISEEVQEQIELVHAQFKRAKAQTEFADLQLDLDIAVAQKDKDPDPAILKRLSEKLHLRTMNDLKKESTELHELVITSNGELGDSFETVSSLLRKLKDCVLAENPEVDTYENENVSIKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHRTCPKTQQTLLHTALTPNYVLKSLIGLWCDSNGVELPKKQGSCRTKKSGTSLSDCDRTAIKALLDKLTSNDIEQQRAAAGELRLLAKRNADNRVCIAEAGAIPLLVDLLSSTDPRTQEHAVTALLNLSINESNKGTIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVLDENKVAIGAAGAIPALIKLLCEGTPRGKKDAATAIFNLCIYQGNKARAVKAGIVAPLIRFMKDAGGGMVDEALAIMTILAGHHEGRTAIGQAEPIPILVEVIRTGSPRNRENAAAVLWLVCTGDLLQLKLAKEHGAEEALQGLSENGTDRAKRKAGSILELLQRIEGEDSLQNT*