Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332810 | AES66638.1 | 95.405 | 457 | 20 | 1 | 1 | 456 | 1 | 457 | 0.0 | 905 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332810 | sp|Q147F9|AATPC_ARATH | 52.518 | 417 | 196 | 2 | 25 | 439 | 30 | 446 | 2.53e-156 | 454 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004880 | Msa0332810 | 0.810245 | 1.268592e-50 | -8.615850e-47 |
| Msa0017510 | Msa0332810 | 0.855763 | 5.070310e-62 | -8.615850e-47 |
| Msa0031340 | Msa0332810 | 0.813460 | 2.531060e-51 | -8.615850e-47 |
| Msa0053780 | Msa0332810 | 0.800279 | 1.552499e-48 | -8.615850e-47 |
| Msa0078650 | Msa0332810 | 0.811664 | 6.251014e-51 | -8.615850e-47 |
| Msa0110970 | Msa0332810 | 0.813436 | 2.561767e-51 | -8.615850e-47 |
| Msa0126370 | Msa0332810 | 0.816285 | 5.983025e-52 | -8.615850e-47 |
| Msa0140780 | Msa0332810 | 0.808779 | 2.618560e-50 | -8.615850e-47 |
| Msa0157290 | Msa0332810 | 0.855774 | 5.034425e-62 | -8.615850e-47 |
| Msa0191250 | Msa0332810 | 0.802515 | 5.408798e-49 | -8.615850e-47 |
| Msa0197930 | Msa0332810 | 0.819655 | 1.036253e-52 | -8.615850e-47 |
| Msa0200260 | Msa0332810 | 0.806653 | 7.410395e-50 | -8.615850e-47 |
| Msa0212990 | Msa0332810 | 0.801041 | 1.085680e-48 | -8.615850e-47 |
| Msa0216240 | Msa0332810 | 0.802444 | 5.593890e-49 | -8.615850e-47 |
| Msa0243100 | Msa0332810 | 0.809651 | 1.702856e-50 | -8.615850e-47 |
| Msa0283520 | Msa0332810 | 0.801381 | 9.249713e-49 | -8.615850e-47 |
| Msa0287650 | Msa0332810 | 0.829627 | 4.631767e-55 | -8.615850e-47 |
| Msa0294240 | Msa0332810 | 0.823755 | 1.167515e-53 | -8.615850e-47 |
| Msa0317280 | Msa0332810 | 0.807961 | 3.914417e-50 | -8.615850e-47 |
| Msa0332000 | Msa0332810 | 0.802299 | 5.993350e-49 | -8.615850e-47 |
| Msa0332810 | Msa0334360 | 0.801314 | 9.544744e-49 | -8.615850e-47 |
| Msa0332810 | Msa0366240 | 0.804298 | 2.309716e-49 | -8.615850e-47 |
| Msa0332810 | Msa0370030 | 0.806442 | 8.211408e-50 | -8.615850e-47 |
| Msa0332810 | Msa0392490 | 0.800634 | 1.314573e-48 | -8.615850e-47 |
| Msa0332810 | Msa0395790 | 0.814685 | 1.358098e-51 | -8.615850e-47 |
| Msa0332810 | Msa0410650 | 0.831467 | 1.641968e-55 | -8.615850e-47 |
| Msa0332810 | Msa0417880 | 0.804768 | 1.843057e-49 | -8.615850e-47 |
| Msa0332810 | Msa0419820 | 0.800186 | 1.621655e-48 | -8.615850e-47 |
| Msa0332810 | Msa0475790 | 0.808425 | 3.117450e-50 | -8.615850e-47 |
| Msa0332810 | Msa0484780 | 0.812439 | 4.236404e-51 | -8.615850e-47 |
| Msa0332810 | Msa0487630 | 0.815086 | 1.106877e-51 | -8.615850e-47 |
| Msa0332810 | Msa0503580 | 0.805259 | 1.455039e-49 | -8.615850e-47 |
| Msa0332810 | Msa0507680 | 0.828201 | 1.025572e-54 | -8.615850e-47 |
| Msa0332810 | Msa0509610 | 0.802305 | 5.975751e-49 | -8.615850e-47 |
| Msa0332810 | Msa0534590 | 0.806460 | 8.138277e-50 | -8.615850e-47 |
| Msa0332810 | Msa0545070 | 0.804365 | 2.236840e-49 | -8.615850e-47 |
| Msa0332810 | Msa0574890 | 0.805563 | 1.256491e-49 | -8.615850e-47 |
| Msa0332810 | Msa0590800 | 0.800278 | 1.553425e-48 | -8.615850e-47 |
| Msa0332810 | Msa0601750 | 0.806278 | 8.891174e-50 | -8.615850e-47 |
| Msa0332810 | Msa0631120 | 0.811355 | 7.296776e-51 | -8.615850e-47 |
| Msa0332810 | Msa0647980 | 0.805671 | 1.192766e-49 | -8.615850e-47 |
| Msa0332810 | Msa0682330 | 0.804120 | 2.516188e-49 | -8.615850e-47 |
| Msa0332810 | Msa0706420 | 0.802602 | 5.189367e-49 | -8.615850e-47 |
| Msa0332810 | Msa0741900 | 0.805729 | 1.160040e-49 | -8.615850e-47 |
| Msa0332810 | Msa0824660 | 0.803423 | 3.510814e-49 | -8.615850e-47 |
| Msa0332810 | Msa0828560 | 0.806611 | 7.561073e-50 | -8.615850e-47 |
| Msa0332810 | Msa0867890 | 0.803554 | 3.297648e-49 | -8.615850e-47 |
| Msa0332810 | Msa0880140 | 0.855810 | 4.912963e-62 | -8.615850e-47 |
| Msa0332810 | Msa0908050 | 0.805309 | 1.420586e-49 | -8.615850e-47 |
| Msa0332810 | Msa0922410 | 0.801466 | 8.885511e-49 | -8.615850e-47 |
| Msa0332810 | Msa0933230 | 0.811927 | 5.479477e-51 | -8.615850e-47 |
| Msa0332810 | Msa0971090 | 0.800924 | 1.147311e-48 | -8.615850e-47 |
| Msa0332810 | Msa1082500 | 0.807241 | 5.565718e-50 | -8.615850e-47 |
| Msa0332810 | Msa1085200 | 0.830231 | 3.300266e-55 | -8.615850e-47 |
| Msa0332810 | Msa1140690 | 0.817571 | 3.077626e-52 | -8.615850e-47 |
| Msa0332810 | Msa1151910 | 0.824441 | 8.058189e-54 | -8.615850e-47 |
| Msa0332810 | Msa1172450 | 0.811337 | 7.362411e-51 | -8.615850e-47 |
| Msa0332810 | Msa1172670 | 0.820017 | 8.563887e-53 | -8.615850e-47 |
| Msa0332810 | Msa1193290 | 0.814128 | 1.803992e-51 | -8.615850e-47 |
| Msa0332810 | Msa1214890 | 0.813512 | 2.465755e-51 | -8.615850e-47 |
| Msa0332810 | Msa1252140 | 0.817163 | 3.803233e-52 | -8.615850e-47 |
| Msa0332810 | Msa1308380 | 0.806216 | 9.163569e-50 | -8.615850e-47 |
| Msa0332810 | Msa1331910 | 0.811080 | 8.373273e-51 | -8.615850e-47 |
| Msa0332810 | Msa1346370 | 0.820214 | 7.719378e-53 | -8.615850e-47 |
| Msa0332810 | Msa1359040 | 0.807652 | 4.552534e-50 | -8.615850e-47 |
| Msa0332810 | Msa1370090 | 0.807712 | 4.420221e-50 | -8.615850e-47 |
| Msa0332810 | Msa1374550 | 0.819342 | 1.221420e-52 | -8.615850e-47 |
| Msa0332810 | Msa1461300 | 0.817154 | 3.820985e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332810 | MtrunA17_Chr2g0315911 | 95.405 | 457 | 20 | 1 | 1 | 456 | 1 | 457 | 0.0 | 905 |
| Msa0332810 | MtrunA17_Chr2g0315971 | 83.778 | 450 | 69 | 4 | 7 | 455 | 1 | 447 | 0.0 | 780 |
| Msa0332810 | MtrunA17_Chr2g0315971 | 65.632 | 419 | 92 | 7 | 44 | 460 | 361 | 729 | 3.59e-171 | 498 |
| Msa0332810 | MtrunA17_Chr2g0315991 | 79.792 | 480 | 70 | 5 | 1 | 460 | 1 | 473 | 0.0 | 777 |
| Msa0332810 | MtrunA17_Chr2g0315921 | 84.340 | 447 | 62 | 3 | 3 | 442 | 1 | 446 | 0.0 | 773 |
| Msa0332810 | MtrunA17_Chr2g0315981 | 79.826 | 461 | 84 | 4 | 7 | 460 | 1 | 459 | 0.0 | 757 |
| Msa0332810 | MtrunA17_Chr2g0316021 | 74.501 | 451 | 79 | 3 | 7 | 456 | 1 | 416 | 0.0 | 680 |
| Msa0332810 | MtrunA17_Chr2g0316041 | 82.785 | 395 | 65 | 1 | 65 | 456 | 1 | 395 | 0.0 | 670 |
| Msa0332810 | MtrunA17_Chr8g0372701 | 46.004 | 463 | 233 | 6 | 6 | 454 | 15 | 474 | 1.61e-148 | 432 |
| Msa0332810 | MtrunA17_Chr5g0404651 | 45.648 | 471 | 242 | 7 | 1 | 461 | 7 | 473 | 2.58e-146 | 427 |
| Msa0332810 | MtrunA17_Chr5g0404661 | 42.222 | 450 | 233 | 7 | 21 | 446 | 36 | 482 | 8.83e-119 | 356 |
| Msa0332810 | MtrunA17_Chr4g0059811 | 41.649 | 485 | 227 | 10 | 16 | 454 | 15 | 489 | 1.49e-115 | 349 |
| Msa0332810 | MtrunA17_Chr1g0155131 | 42.451 | 457 | 225 | 8 | 16 | 444 | 12 | 458 | 2.46e-112 | 339 |
| Msa0332810 | MtrunA17_Chr2g0292561 | 40.570 | 456 | 244 | 6 | 16 | 450 | 15 | 464 | 1.54e-111 | 337 |
| Msa0332810 | MtrunA17_Chr7g0215951 | 39.869 | 459 | 228 | 8 | 16 | 434 | 10 | 460 | 6.09e-108 | 329 |
| Msa0332810 | MtrunA17_Chr6g0452451 | 38.961 | 462 | 231 | 9 | 16 | 433 | 14 | 468 | 2.16e-105 | 323 |
| Msa0332810 | MtrunA17_Chr6g0452401 | 39.825 | 457 | 211 | 11 | 30 | 434 | 4 | 448 | 2.59e-103 | 316 |
| Msa0332810 | MtrunA17_Chr6g0452371 | 40.693 | 462 | 217 | 12 | 16 | 434 | 14 | 461 | 2.68e-103 | 317 |
| Msa0332810 | MtrunA17_Chr6g0466811 | 39.207 | 454 | 238 | 11 | 5 | 434 | 12 | 451 | 4.14e-101 | 311 |
| Msa0332810 | MtrunA17_Chr4g0072491 | 36.929 | 482 | 251 | 9 | 16 | 459 | 10 | 476 | 6.56e-101 | 311 |
| Msa0332810 | MtrunA17_Chr6g0452391 | 39.059 | 489 | 244 | 12 | 16 | 458 | 12 | 492 | 5.80e-99 | 306 |
| Msa0332810 | MtrunA17_Chr1g0155121 | 37.872 | 470 | 240 | 9 | 7 | 435 | 1 | 459 | 3.39e-98 | 304 |
| Msa0332810 | MtrunA17_Chr6g0452411 | 43.617 | 376 | 157 | 8 | 104 | 434 | 1 | 366 | 8.85e-97 | 297 |
| Msa0332810 | MtrunA17_Chr2g0308991 | 35.876 | 485 | 248 | 12 | 14 | 456 | 3 | 466 | 4.01e-96 | 299 |
| Msa0332810 | MtrunA17_Chr3g0134831 | 49.310 | 290 | 127 | 4 | 162 | 434 | 1 | 287 | 8.87e-93 | 283 |
| Msa0332810 | MtrunA17_Chr6g0452361 | 51.948 | 231 | 104 | 3 | 211 | 434 | 1 | 231 | 1.53e-77 | 243 |
| Msa0332810 | MtrunA17_Chr3g0127381 | 34.037 | 379 | 212 | 10 | 68 | 436 | 66 | 416 | 1.05e-68 | 227 |
| Msa0332810 | MtrunA17_Chr6g0452481 | 46.032 | 252 | 126 | 5 | 191 | 434 | 5 | 254 | 8.71e-68 | 219 |
| Msa0332810 | MtrunA17_Chr7g0276031 | 33.146 | 356 | 200 | 8 | 65 | 414 | 61 | 384 | 1.84e-64 | 215 |
| Msa0332810 | MtrunA17_Chr8g0346371 | 32.908 | 392 | 227 | 10 | 54 | 434 | 48 | 414 | 9.75e-63 | 211 |
| Msa0332810 | MtrunA17_Chr5g0404671 | 62.857 | 105 | 37 | 1 | 332 | 434 | 1 | 105 | 1.24e-36 | 132 |
| Msa0332810 | MtrunA17_Chr2g0315961 | 92.424 | 66 | 5 | 0 | 365 | 430 | 1 | 66 | 1.46e-36 | 129 |
| Msa0332810 | MtrunA17_Chr5g0404681 | 45.299 | 117 | 61 | 2 | 149 | 265 | 39 | 152 | 3.62e-32 | 120 |
| Msa0332810 | MtrunA17_Chr5g0404691 | 48.299 | 147 | 68 | 4 | 291 | 434 | 8 | 149 | 2.28e-31 | 118 |
| Msa0332810 | MtrunA17_Chr1g0148871 | 41.045 | 134 | 79 | 0 | 306 | 439 | 3 | 136 | 1.72e-29 | 113 |
| Msa0332810 | MtrunA17_Chr3g0108321 | 28.485 | 165 | 106 | 4 | 216 | 372 | 171 | 331 | 3.29e-14 | 73.9 |
| Msa0332810 | MtrunA17_Chr3g0145011 | 30.047 | 213 | 130 | 8 | 190 | 392 | 129 | 332 | 6.21e-14 | 73.6 |
| Msa0332810 | MtrunA17_Chr3g0141901 | 26.855 | 283 | 184 | 10 | 190 | 458 | 126 | 399 | 1.17e-13 | 72.4 |
| Msa0332810 | MtrunA17_Chr4g0050561 | 29.310 | 174 | 111 | 5 | 210 | 375 | 163 | 332 | 6.97e-13 | 70.1 |
| Msa0332810 | MtrunA17_Chr7g0217421 | 29.121 | 182 | 112 | 6 | 201 | 372 | 36 | 210 | 7.63e-13 | 70.1 |
| Msa0332810 | MtrunA17_Chr7g0255721 | 31.579 | 152 | 89 | 5 | 228 | 371 | 408 | 552 | 1.45e-12 | 70.1 |
| Msa0332810 | MtrunA17_Chr8g0388371 | 30.357 | 168 | 101 | 4 | 222 | 375 | 421 | 586 | 8.97e-12 | 67.8 |
| Msa0332810 | MtrunA17_Chr7g0264521 | 24.194 | 248 | 144 | 9 | 161 | 372 | 136 | 375 | 2.35e-11 | 66.2 |
| Msa0332810 | MtrunA17_Chr7g0264521 | 28.409 | 176 | 114 | 5 | 205 | 372 | 480 | 651 | 3.89e-11 | 65.5 |
| Msa0332810 | MtrunA17_Chr8g0362771 | 29.412 | 153 | 92 | 5 | 226 | 369 | 258 | 403 | 2.40e-11 | 66.2 |
| Msa0332810 | MtrunA17_Chr1g0180791 | 29.341 | 167 | 106 | 5 | 213 | 371 | 487 | 649 | 3.08e-11 | 65.9 |
| Msa0332810 | MtrunA17_Chr1g0211521 | 41.053 | 95 | 50 | 3 | 365 | 453 | 5 | 99 | 3.27e-11 | 60.5 |
| Msa0332810 | MtrunA17_Chr2g0327121 | 29.341 | 167 | 106 | 5 | 213 | 371 | 489 | 651 | 3.27e-11 | 65.9 |
| Msa0332810 | MtrunA17_Chr3g0086401 | 26.389 | 216 | 138 | 6 | 211 | 416 | 105 | 309 | 5.24e-11 | 65.1 |
| Msa0332810 | MtrunA17_Chr3g0104211 | 30.460 | 174 | 109 | 5 | 204 | 369 | 304 | 473 | 5.28e-11 | 65.1 |
| Msa0332810 | MtrunA17_Chr7g0255901 | 28.125 | 160 | 103 | 4 | 236 | 387 | 670 | 825 | 7.81e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332810 | AT3G50940.1 | 52.518 | 417 | 196 | 2 | 25 | 439 | 30 | 446 | 2.58e-157 | 454 |
| Msa0332810 | AT3G50930.1 | 48.430 | 446 | 210 | 5 | 23 | 451 | 74 | 516 | 1.90e-149 | 438 |
| Msa0332810 | AT2G18193.1 | 43.556 | 450 | 217 | 7 | 16 | 446 | 20 | 451 | 6.48e-127 | 377 |
| Msa0332810 | AT5G17740.1 | 40.741 | 459 | 258 | 4 | 16 | 461 | 19 | 476 | 2.84e-122 | 367 |
| Msa0332810 | AT2G18190.1 | 42.366 | 465 | 238 | 6 | 4 | 449 | 5 | 458 | 1.04e-121 | 364 |
| Msa0332810 | AT5G17760.1 | 41.632 | 478 | 250 | 7 | 10 | 462 | 9 | 482 | 1.97e-121 | 364 |
| Msa0332810 | AT5G17730.1 | 41.060 | 453 | 245 | 10 | 10 | 446 | 9 | 455 | 4.29e-119 | 357 |
| Msa0332810 | AT3G28600.1 | 40.909 | 462 | 218 | 9 | 16 | 440 | 9 | 452 | 1.31e-112 | 340 |
| Msa0332810 | AT3G28510.1 | 40.263 | 457 | 230 | 8 | 16 | 437 | 13 | 461 | 1.74e-111 | 339 |
| Msa0332810 | AT3G28540.2 | 40.044 | 457 | 218 | 8 | 16 | 431 | 13 | 454 | 2.11e-109 | 333 |
| Msa0332810 | AT3G28540.1 | 40.044 | 457 | 218 | 8 | 16 | 431 | 13 | 454 | 2.69e-109 | 333 |
| Msa0332810 | AT3G28610.1 | 39.792 | 480 | 219 | 12 | 3 | 440 | 1 | 452 | 2.63e-108 | 329 |
| Msa0332810 | AT4G05380.1 | 41.015 | 473 | 236 | 11 | 3 | 446 | 1 | 459 | 2.98e-108 | 328 |
| Msa0332810 | AT3G28580.1 | 40.043 | 467 | 231 | 12 | 1 | 430 | 1 | 455 | 9.72e-108 | 328 |
| Msa0332810 | AT4G25835.1 | 39.359 | 437 | 222 | 8 | 16 | 419 | 10 | 436 | 4.08e-105 | 322 |
| Msa0332810 | AT5G40010.1 | 40.088 | 454 | 227 | 9 | 16 | 430 | 13 | 460 | 1.06e-103 | 319 |
| Msa0332810 | AT5G40000.1 | 38.958 | 480 | 239 | 10 | 7 | 450 | 4 | 465 | 1.04e-101 | 312 |
| Msa0332810 | AT5G17750.1 | 40.342 | 409 | 204 | 10 | 5 | 402 | 11 | 390 | 5.42e-101 | 308 |
| Msa0332810 | AT1G43910.1 | 37.792 | 471 | 245 | 8 | 4 | 442 | 1 | 455 | 2.94e-100 | 308 |
| Msa0332810 | AT5G57480.1 | 35.792 | 461 | 249 | 8 | 16 | 436 | 10 | 463 | 3.48e-100 | 310 |
| Msa0332810 | AT3G28570.2 | 38.622 | 479 | 242 | 13 | 2 | 455 | 3 | 454 | 1.20e-98 | 304 |
| Msa0332810 | AT3G28570.1 | 41.766 | 419 | 203 | 9 | 51 | 455 | 56 | 447 | 1.26e-98 | 303 |
| Msa0332810 | AT3G28600.2 | 38.901 | 455 | 198 | 8 | 16 | 440 | 9 | 413 | 2.64e-97 | 300 |
| Msa0332810 | AT4G30250.1 | 35.941 | 473 | 248 | 11 | 7 | 436 | 1 | 461 | 1.62e-96 | 300 |
| Msa0332810 | AT3G28520.1 | 39.278 | 471 | 243 | 8 | 18 | 454 | 1 | 462 | 1.65e-96 | 299 |
| Msa0332810 | AT4G30250.2 | 35.941 | 473 | 248 | 11 | 7 | 436 | 3 | 463 | 1.97e-96 | 300 |
| Msa0332810 | AT3G28580.2 | 37.885 | 454 | 237 | 11 | 1 | 430 | 1 | 433 | 5.86e-96 | 298 |
| Msa0332810 | AT2G46620.1 | 31.723 | 476 | 268 | 12 | 4 | 454 | 1 | 444 | 8.94e-75 | 243 |
| Msa0332810 | AT5G17760.2 | 39.329 | 328 | 180 | 5 | 10 | 322 | 9 | 332 | 4.61e-72 | 231 |
| Msa0332810 | AT3G29800.1 | 32.524 | 412 | 213 | 12 | 54 | 448 | 40 | 403 | 9.53e-64 | 213 |
| Msa0332810 | AT4G05340.1 | 60.294 | 68 | 27 | 0 | 322 | 389 | 26 | 93 | 3.17e-20 | 85.9 |
| Msa0332810 | AT3G28560.1 | 32.727 | 165 | 90 | 4 | 63 | 214 | 55 | 211 | 7.75e-18 | 83.6 |
| Msa0332810 | AT5G58290.1 | 26.341 | 205 | 137 | 6 | 204 | 400 | 152 | 350 | 9.97e-15 | 76.3 |
| Msa0332810 | AT1G45000.1 | 28.521 | 284 | 178 | 12 | 190 | 458 | 126 | 399 | 5.74e-14 | 73.9 |
| Msa0332810 | AT5G43010.1 | 30.256 | 195 | 118 | 7 | 190 | 375 | 126 | 311 | 6.45e-14 | 73.6 |
| Msa0332810 | AT5G19990.2 | 29.310 | 174 | 111 | 5 | 210 | 375 | 107 | 276 | 5.76e-13 | 70.5 |
| Msa0332810 | AT5G20000.1 | 29.310 | 174 | 111 | 5 | 210 | 375 | 165 | 334 | 9.70e-13 | 70.1 |
| Msa0332810 | AT5G19990.1 | 29.310 | 174 | 111 | 5 | 210 | 375 | 165 | 334 | 1.04e-12 | 70.1 |
| Msa0332810 | AT5G19990.3 | 29.310 | 174 | 111 | 5 | 210 | 375 | 165 | 334 | 1.04e-12 | 70.1 |
| Msa0332810 | AT2G03670.1 | 31.210 | 157 | 85 | 6 | 234 | 375 | 49 | 197 | 2.46e-11 | 66.2 |
| Msa0332810 | AT2G03670.2 | 31.210 | 157 | 85 | 6 | 234 | 375 | 49 | 197 | 2.98e-11 | 65.5 |
| Msa0332810 | AT3G53230.1 | 24.194 | 248 | 144 | 9 | 161 | 372 | 135 | 374 | 4.77e-11 | 65.9 |
| Msa0332810 | AT3G53230.1 | 29.167 | 168 | 107 | 5 | 213 | 372 | 487 | 650 | 6.20e-11 | 65.5 |
| Msa0332810 | AT3G09840.1 | 23.790 | 248 | 145 | 9 | 161 | 372 | 134 | 373 | 7.17e-11 | 65.1 |
| Msa0332810 | AT5G03340.1 | 23.790 | 248 | 145 | 9 | 161 | 372 | 134 | 373 | 7.30e-11 | 65.1 |
Find 72 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAAGATTGAAGTTCTTCT+TGG | 0.223470 | 2_4:-50108692 | Msa0332810:CDS |
| CTTCTCTCTTAGTCTCTTCC+TGG | 0.235607 | 2_4:+50108561 | None:intergenic |
| TTTCAACAGATGACACTTTC+GGG | 0.253746 | 2_4:-50108920 | Msa0332810:intron |
| ATTGGATGGTTGAACTTAAT+AGG | 0.269533 | 2_4:+50109702 | None:intergenic |
| TTGAAATTCTTCAATGACTA+TGG | 0.286598 | 2_4:+50110124 | None:intergenic |
| AAGGGAAATTAAGAATGATT+TGG | 0.292518 | 2_4:-50109643 | Msa0332810:CDS |
| TTGTATGGTCCTCCTGGTAC+TGG | 0.303664 | 2_4:-50109555 | Msa0332810:CDS |
| GAAGATGAAGTTGTTCATAA+TGG | 0.306237 | 2_4:-50109357 | Msa0332810:CDS |
| AGTCCTAAACTTTGTTCAAT+TGG | 0.320894 | 2_4:-50110186 | Msa0332810:CDS |
| CAAGAATTCGACATTATGAT+AGG | 0.351643 | 2_4:-50109899 | Msa0332810:CDS |
| GTCCTAAACTTTGTTCAATT+GGG | 0.369166 | 2_4:-50110185 | Msa0332810:CDS |
| GTCCCAATTGAACAAAGTTT+AGG | 0.371014 | 2_4:+50110183 | None:intergenic |
| TGAATGCAGTAGATGGTCTT+TGG | 0.373799 | 2_4:-50108892 | Msa0332810:CDS |
| GAACAACTTCATCTTCTTCT+CGG | 0.380479 | 2_4:+50109364 | None:intergenic |
| TGTTCATAATGGGCACAATA+AGG | 0.386190 | 2_4:-50109346 | Msa0332810:intron |
| AGTTAAAGCAACCAAATCTA+AGG | 0.392234 | 2_4:-50110027 | Msa0332810:CDS |
| ACCGCGTTTCCAAGCTTTCC+CGG | 0.395418 | 2_4:+50109584 | None:intergenic |
| AGTTGCTTTAGTTCCTAGAT+AGG | 0.400041 | 2_4:+50110064 | None:intergenic |
| GGAATTTGATAAGGTCTTGC+AGG | 0.402644 | 2_4:+50108603 | None:intergenic |
| ACTTGGATCTCACTAATGTT+GGG | 0.408726 | 2_4:-50109479 | Msa0332810:CDS |
| AACTCTTCTGCAATTTCAGC+TGG | 0.411104 | 2_4:+50108653 | None:intergenic |
| AAGATGAAGTTGTTCATAAT+GGG | 0.412763 | 2_4:-50109356 | Msa0332810:CDS |
| GAGGCAGCAGAAGCCTATCT+AGG | 0.421960 | 2_4:-50110077 | Msa0332810:CDS |
| TGGCTTGGAGGAATTTGATA+AGG | 0.429033 | 2_4:+50108594 | None:intergenic |
| ATTCCTCCAAGCCAAGAAAA+TGG | 0.431539 | 2_4:-50108585 | Msa0332810:CDS |
| GAGGCCACTGCAGATAAAAC+TGG | 0.436495 | 2_4:+50110254 | None:intergenic |
| TGGTGAATTGTGCGTTGAAT+TGG | 0.444709 | 2_4:+50110144 | None:intergenic |
| CCGTTCTATACTTGTGATAG+AGG | 0.447088 | 2_4:-50109415 | Msa0332810:CDS |
| GACTTGGATCTCACTAATGT+TGG | 0.453484 | 2_4:-50109480 | Msa0332810:CDS |
| TTGAAGGTGTTAGTGTAAAG+TGG | 0.455356 | 2_4:-50109950 | Msa0332810:CDS |
| TACTTGTTGTATGGTCCTCC+TGG | 0.457478 | 2_4:-50109561 | Msa0332810:CDS |
| GCAAGAGTGTTGAAACTCAT+TGG | 0.462379 | 2_4:+50109684 | None:intergenic |
| TTAGCTCTCTCCATCACATA+AGG | 0.464927 | 2_4:+50109792 | None:intergenic |
| TCACAACAAATCACAAAGAC+AGG | 0.471357 | 2_4:-50108838 | Msa0332810:CDS |
| AAACGCGGTTACTTGTTGTA+TGG | 0.474020 | 2_4:-50109570 | Msa0332810:CDS |
| ATAGAAGAACCGGGAAAGCT+TGG | 0.478091 | 2_4:-50109593 | Msa0332810:CDS |
| AGCAAAGAAGAACAAGATCT+AGG | 0.484846 | 2_4:-50108533 | Msa0332810:CDS |
| CAATTGATGAAGAGCTTCAA+AGG | 0.486235 | 2_4:-50109662 | Msa0332810:CDS |
| ATAGTCATTGAAGAATTTCA+AGG | 0.496242 | 2_4:-50110122 | Msa0332810:CDS |
| GTCTAGCTTGATTGCAGCCA+TGG | 0.496694 | 2_4:-50109529 | Msa0332810:CDS |
| AAGCTAGACTTCCCAGTACC+AGG | 0.497146 | 2_4:+50109543 | None:intergenic |
| GGACTATTGAATGCAGTAGA+TGG | 0.497808 | 2_4:-50108899 | Msa0332810:CDS |
| CCAAGCCAAGAAAATGGTCC+AGG | 0.508568 | 2_4:-50108579 | Msa0332810:CDS |
| GATCTAGGCAGAGAAAATAT+AGG | 0.509105 | 2_4:-50108518 | Msa0332810:CDS |
| CAACTATGATATCTATGACT+TGG | 0.513130 | 2_4:-50109496 | Msa0332810:CDS |
| ATTTGCTTGTCCATTCTACC+AGG | 0.513687 | 2_4:+50108794 | None:intergenic |
| AGTTCGCATTAGTGCAATTG+AGG | 0.518879 | 2_4:+50110235 | None:intergenic |
| TTCATATTTGCCTTATGTGA+TGG | 0.523892 | 2_4:-50109802 | Msa0332810:CDS |
| TGTATGGTCCTCCTGGTACT+GGG | 0.528478 | 2_4:-50109554 | Msa0332810:CDS |
| AATTGATGAAGAGCTTCAAA+GGG | 0.533769 | 2_4:-50109661 | Msa0332810:CDS |
| TCTGTTAAGACCTGGTAGAA+TGG | 0.545715 | 2_4:-50108804 | Msa0332810:CDS |
| CTACCAGGTCTTAACAGAGC+AGG | 0.546075 | 2_4:+50108809 | None:intergenic |
| TATCACAAGTATAGAACGGT+TGG | 0.555140 | 2_4:+50109419 | None:intergenic |
| ACAAATTAAACAAGGAATTG+TGG | 0.559399 | 2_4:-50109769 | Msa0332810:CDS |
| AAGAATTCGACATTATGATA+GGG | 0.568700 | 2_4:-50109898 | Msa0332810:CDS |
| ACTCAAATGAATATAATCGT+TGG | 0.570247 | 2_4:-50109734 | Msa0332810:CDS |
| ACATTATGATAGGGACTCCT+CGG | 0.578511 | 2_4:-50109889 | Msa0332810:CDS |
| CTTGGATCTCACTAATGTTG+GGG | 0.595649 | 2_4:-50109478 | Msa0332810:CDS |
| GATCCTGCTCTGTTAAGACC+TGG | 0.601081 | 2_4:-50108812 | Msa0332810:CDS |
| GTTCATGTTCAGTAATGCAA+AGG | 0.603050 | 2_4:+50108720 | None:intergenic |
| TAGTCATTGAAGAATTTCAA+GGG | 0.606257 | 2_4:-50110121 | Msa0332810:CDS |
| GAGTGTTGAAACTCATTGGA+TGG | 0.615289 | 2_4:+50109688 | None:intergenic |
| ACCGGGAAAGCTTGGAAACG+CGG | 0.621197 | 2_4:-50109585 | Msa0332810:CDS |
| TCTTATTTCTGACACAGCCG+AGG | 0.630279 | 2_4:+50109872 | None:intergenic |
| GATGGTCTTTGGTCGTGCTG+TGG | 0.632541 | 2_4:-50108881 | Msa0332810:CDS |
| CCTCTATCACAAGTATAGAA+CGG | 0.641804 | 2_4:+50109415 | None:intergenic |
| TCTTTGGTCGTGCTGTGGAG+AGG | 0.654429 | 2_4:-50108876 | Msa0332810:CDS |
| ATAGTTGAGATAGTTAGCCA+TGG | 0.661661 | 2_4:+50109512 | None:intergenic |
| ACAAAGTTTAGGACTTCACG+AGG | 0.668909 | 2_4:+50110194 | None:intergenic |
| AGAGCTAAACAAATTAAACA+AGG | 0.691321 | 2_4:-50109777 | Msa0332810:CDS |
| AATTGCAGAAGAGTTAACAA+AGG | 0.702150 | 2_4:-50108645 | Msa0332810:CDS |
| CTAGACTTCCCAGTACCAGG+AGG | 0.750100 | 2_4:+50109546 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTTAGCTGAAAAAATT+TGG | - | chr2_4:50109649-50109668 | Msa0332810:CDS | 15.0% |
| !! | AATATTTAGCTGAAAAAATT+TGG | - | chr2_4:50109649-50109668 | Msa0332810:CDS | 15.0% |
| !!! | AAAGAATTTTATAGAAGAAC+CGG | - | chr2_4:50109192-50109211 | Msa0332810:intron | 20.0% |
| !! | TCTTTCAAATAATTACAGTT+TGG | + | chr2_4:50109523-50109542 | None:intergenic | 20.0% |
| !!! | ATTAGTTTAAAATAGTTGAC+AGG | + | chr2_4:50109841-50109860 | None:intergenic | 20.0% |
| !!! | AAAGAATTTTATAGAAGAAC+CGG | - | chr2_4:50109192-50109211 | Msa0332810:intron | 20.0% |
| !! | TCTTTCAAATAATTACAGTT+TGG | + | chr2_4:50109523-50109542 | None:intergenic | 20.0% |
| !!! | ATTAGTTTAAAATAGTTGAC+AGG | + | chr2_4:50109841-50109860 | None:intergenic | 20.0% |
| ! | TTGAAATTCTTCAATGACTA+TGG | + | chr2_4:50108674-50108693 | None:intergenic | 25.0% |
| ! | ATAGTCATTGAAGAATTTCA+AGG | - | chr2_4:50108673-50108692 | Msa0332810:CDS | 25.0% |
| ! | TAGTCATTGAAGAATTTCAA+GGG | - | chr2_4:50108674-50108693 | Msa0332810:CDS | 25.0% |
| !! | CTTTTTATGTTCCTTAGATT+TGG | + | chr2_4:50108782-50108801 | None:intergenic | 25.0% |
| ! | AAGAATTCGACATTATGATA+GGG | - | chr2_4:50108897-50108916 | Msa0332810:CDS | 25.0% |
| ! | AGAGCTAAACAAATTAAACA+AGG | - | chr2_4:50109018-50109037 | Msa0332810:intron | 25.0% |
| ! | ACAAATTAAACAAGGAATTG+TGG | - | chr2_4:50109026-50109045 | Msa0332810:intron | 25.0% |
| ! | ACTCAAATGAATATAATCGT+TGG | - | chr2_4:50109061-50109080 | Msa0332810:intron | 25.0% |
| ! | AAGGGAAATTAAGAATGATT+TGG | - | chr2_4:50109152-50109171 | Msa0332810:intron | 25.0% |
| !! | AAGAATTTTATAGAAGAACC+GGG | - | chr2_4:50109193-50109212 | Msa0332810:intron | 25.0% |
| ! | AAGATGAAGTTGTTCATAAT+GGG | - | chr2_4:50109439-50109458 | Msa0332810:CDS | 25.0% |
| ! | ATAAGTCATGTTGTTAACAA+AGG | + | chr2_4:50109614-50109633 | None:intergenic | 25.0% |
| !! | ATGACATGTATTTTCAAACT+AGG | - | chr2_4:50109720-50109739 | Msa0332810:CDS | 25.0% |
| !!! | CTTTTCTGCTTTTAAGAAAT+TGG | - | chr2_4:50110042-50110061 | Msa0332810:CDS | 25.0% |
| ! | TTGAAATTCTTCAATGACTA+TGG | + | chr2_4:50108674-50108693 | None:intergenic | 25.0% |
| ! | ATAGTCATTGAAGAATTTCA+AGG | - | chr2_4:50108673-50108692 | Msa0332810:CDS | 25.0% |
| ! | TAGTCATTGAAGAATTTCAA+GGG | - | chr2_4:50108674-50108693 | Msa0332810:CDS | 25.0% |
| !! | CTTTTTATGTTCCTTAGATT+TGG | + | chr2_4:50108782-50108801 | None:intergenic | 25.0% |
| ! | AAGAATTCGACATTATGATA+GGG | - | chr2_4:50108897-50108916 | Msa0332810:CDS | 25.0% |
| ! | AGAGCTAAACAAATTAAACA+AGG | - | chr2_4:50109018-50109037 | Msa0332810:intron | 25.0% |
| ! | ACAAATTAAACAAGGAATTG+TGG | - | chr2_4:50109026-50109045 | Msa0332810:intron | 25.0% |
| ! | ACTCAAATGAATATAATCGT+TGG | - | chr2_4:50109061-50109080 | Msa0332810:intron | 25.0% |
| ! | AAGGGAAATTAAGAATGATT+TGG | - | chr2_4:50109152-50109171 | Msa0332810:intron | 25.0% |
| !! | AAGAATTTTATAGAAGAACC+GGG | - | chr2_4:50109193-50109212 | Msa0332810:intron | 25.0% |
| ! | AAGATGAAGTTGTTCATAAT+GGG | - | chr2_4:50109439-50109458 | Msa0332810:CDS | 25.0% |
| ! | ATAAGTCATGTTGTTAACAA+AGG | + | chr2_4:50109614-50109633 | None:intergenic | 25.0% |
| !! | ATGACATGTATTTTCAAACT+AGG | - | chr2_4:50109720-50109739 | Msa0332810:CDS | 25.0% |
| !!! | CTTTTCTGCTTTTAAGAAAT+TGG | - | chr2_4:50110042-50110061 | Msa0332810:CDS | 25.0% |
| AGTCCTAAACTTTGTTCAAT+TGG | - | chr2_4:50108609-50108628 | Msa0332810:CDS | 30.0% | |
| GTCCTAAACTTTGTTCAATT+GGG | - | chr2_4:50108610-50108629 | Msa0332810:CDS | 30.0% | |
| AGTTAAAGCAACCAAATCTA+AGG | - | chr2_4:50108768-50108787 | Msa0332810:CDS | 30.0% | |
| CAAGAATTCGACATTATGAT+AGG | - | chr2_4:50108896-50108915 | Msa0332810:CDS | 30.0% | |
| TTCATATTTGCCTTATGTGA+TGG | - | chr2_4:50108993-50109012 | Msa0332810:intron | 30.0% | |
| ATTGGATGGTTGAACTTAAT+AGG | + | chr2_4:50109096-50109115 | None:intergenic | 30.0% | |
| AATTGATGAAGAGCTTCAAA+GGG | - | chr2_4:50109134-50109153 | Msa0332810:intron | 30.0% | |
| CAACTATGATATCTATGACT+TGG | - | chr2_4:50109299-50109318 | Msa0332810:intron | 30.0% | |
| ! | TTCTCGGTTTTGCAATTTTA+CGG | + | chr2_4:50109418-50109437 | None:intergenic | 30.0% |
| GAAGATGAAGTTGTTCATAA+TGG | - | chr2_4:50109438-50109457 | Msa0332810:CDS | 30.0% | |
| GAATTTGACATACATGAATC+TGG | - | chr2_4:50109541-50109560 | Msa0332810:CDS | 30.0% | |
| !! | CTGAAAAAATTTGGTCTTGT+TGG | - | chr2_4:50109658-50109677 | Msa0332810:CDS | 30.0% |
| TATGATGTCTGTTCATATCA+TGG | - | chr2_4:50109778-50109797 | Msa0332810:CDS | 30.0% | |
| ATGATGTCTGTTCATATCAT+GGG | - | chr2_4:50109779-50109798 | Msa0332810:CDS | 30.0% | |
| ACAGGAACAAAAGAATATGT+TGG | + | chr2_4:50109823-50109842 | None:intergenic | 30.0% | |
| ! | TTTTCAACAGATGACACTTT+CGG | - | chr2_4:50109874-50109893 | Msa0332810:CDS | 30.0% |
| GAAAAGATTGAAGTTCTTCT+TGG | - | chr2_4:50110103-50110122 | Msa0332810:CDS | 30.0% | |
| AATTGCAGAAGAGTTAACAA+AGG | - | chr2_4:50110150-50110169 | Msa0332810:CDS | 30.0% | |
| AGTCCTAAACTTTGTTCAAT+TGG | - | chr2_4:50108609-50108628 | Msa0332810:CDS | 30.0% | |
| GTCCTAAACTTTGTTCAATT+GGG | - | chr2_4:50108610-50108629 | Msa0332810:CDS | 30.0% | |
| AGTTAAAGCAACCAAATCTA+AGG | - | chr2_4:50108768-50108787 | Msa0332810:CDS | 30.0% | |
| CAAGAATTCGACATTATGAT+AGG | - | chr2_4:50108896-50108915 | Msa0332810:CDS | 30.0% | |
| TTCATATTTGCCTTATGTGA+TGG | - | chr2_4:50108993-50109012 | Msa0332810:intron | 30.0% | |
| ATTGGATGGTTGAACTTAAT+AGG | + | chr2_4:50109096-50109115 | None:intergenic | 30.0% | |
| AATTGATGAAGAGCTTCAAA+GGG | - | chr2_4:50109134-50109153 | Msa0332810:intron | 30.0% | |
| CAACTATGATATCTATGACT+TGG | - | chr2_4:50109299-50109318 | Msa0332810:intron | 30.0% | |
| ! | TTCTCGGTTTTGCAATTTTA+CGG | + | chr2_4:50109418-50109437 | None:intergenic | 30.0% |
| GAAGATGAAGTTGTTCATAA+TGG | - | chr2_4:50109438-50109457 | Msa0332810:CDS | 30.0% | |
| GAATTTGACATACATGAATC+TGG | - | chr2_4:50109541-50109560 | Msa0332810:CDS | 30.0% | |
| !! | CTGAAAAAATTTGGTCTTGT+TGG | - | chr2_4:50109658-50109677 | Msa0332810:CDS | 30.0% |
| TATGATGTCTGTTCATATCA+TGG | - | chr2_4:50109778-50109797 | Msa0332810:CDS | 30.0% | |
| ATGATGTCTGTTCATATCAT+GGG | - | chr2_4:50109779-50109798 | Msa0332810:CDS | 30.0% | |
| ACAGGAACAAAAGAATATGT+TGG | + | chr2_4:50109823-50109842 | None:intergenic | 30.0% | |
| ! | TTTTCAACAGATGACACTTT+CGG | - | chr2_4:50109874-50109893 | Msa0332810:CDS | 30.0% |
| GAAAAGATTGAAGTTCTTCT+TGG | - | chr2_4:50110103-50110122 | Msa0332810:CDS | 30.0% | |
| AATTGCAGAAGAGTTAACAA+AGG | - | chr2_4:50110150-50110169 | Msa0332810:CDS | 30.0% | |
| GTCCCAATTGAACAAAGTTT+AGG | + | chr2_4:50108615-50108634 | None:intergenic | 35.0% | |
| CGTTGAATTGGCAAAAAAGA+TGG | + | chr2_4:50108642-50108661 | None:intergenic | 35.0% | |
| ! | GACAAGAAACCAAGTTTTTG+AGG | - | chr2_4:50108699-50108718 | Msa0332810:CDS | 35.0% |
| ! | AGTTGCTTTAGTTCCTAGAT+AGG | + | chr2_4:50108734-50108753 | None:intergenic | 35.0% |
| !! | GAAGTGAGTGATGTTTTTGA+AGG | - | chr2_4:50108829-50108848 | Msa0332810:CDS | 35.0% |
| !! | TTGAAGGTGTTAGTGTAAAG+TGG | - | chr2_4:50108845-50108864 | Msa0332810:CDS | 35.0% |
| CAATTGATGAAGAGCTTCAA+AGG | - | chr2_4:50109133-50109152 | Msa0332810:intron | 35.0% | |
| ATAGTTGAGATAGTTAGCCA+TGG | + | chr2_4:50109286-50109305 | None:intergenic | 35.0% | |
| ACTTGGATCTCACTAATGTT+GGG | - | chr2_4:50109316-50109335 | Msa0332810:intron | 35.0% | |
| TATCACAAGTATAGAACGGT+TGG | + | chr2_4:50109379-50109398 | None:intergenic | 35.0% | |
| CCTCTATCACAAGTATAGAA+CGG | + | chr2_4:50109383-50109402 | None:intergenic | 35.0% | |
| GAACAACTTCATCTTCTTCT+CGG | + | chr2_4:50109434-50109453 | None:intergenic | 35.0% | |
| !! | TGTTCATAATGGGCACAATA+AGG | - | chr2_4:50109449-50109468 | Msa0332810:CDS | 35.0% |
| AATCATCTGCATGATTTAGC+CGG | - | chr2_4:50109577-50109596 | Msa0332810:CDS | 35.0% | |
| CTAAATATTATGTCCTCGTG+CGG | + | chr2_4:50109638-50109657 | None:intergenic | 35.0% | |
| ! | TGGTAAGATTTTGTCGACAA+TGG | - | chr2_4:50109678-50109697 | Msa0332810:CDS | 35.0% |
| ! | AAGATTTTGTCGACAATGGT+TGG | - | chr2_4:50109682-50109701 | Msa0332810:CDS | 35.0% |
| TGATGTCTGTTCATATCATG+GGG | - | chr2_4:50109780-50109799 | Msa0332810:CDS | 35.0% | |
| TTTCAACAGATGACACTTTC+GGG | - | chr2_4:50109875-50109894 | Msa0332810:CDS | 35.0% | |
| TCACAACAAATCACAAAGAC+AGG | - | chr2_4:50109957-50109976 | Msa0332810:CDS | 35.0% | |
| GTTCATGTTCAGTAATGCAA+AGG | + | chr2_4:50110078-50110097 | None:intergenic | 35.0% | |
| AGCAAAGAAGAACAAGATCT+AGG | - | chr2_4:50110262-50110281 | Msa0332810:CDS | 35.0% | |
| GATCTAGGCAGAGAAAATAT+AGG | - | chr2_4:50110277-50110296 | Msa0332810:CDS | 35.0% | |
| GTCCCAATTGAACAAAGTTT+AGG | + | chr2_4:50108615-50108634 | None:intergenic | 35.0% | |
| CGTTGAATTGGCAAAAAAGA+TGG | + | chr2_4:50108642-50108661 | None:intergenic | 35.0% | |
| ! | GACAAGAAACCAAGTTTTTG+AGG | - | chr2_4:50108699-50108718 | Msa0332810:CDS | 35.0% |
| ! | AGTTGCTTTAGTTCCTAGAT+AGG | + | chr2_4:50108734-50108753 | None:intergenic | 35.0% |
| !! | GAAGTGAGTGATGTTTTTGA+AGG | - | chr2_4:50108829-50108848 | Msa0332810:CDS | 35.0% |
| !! | TTGAAGGTGTTAGTGTAAAG+TGG | - | chr2_4:50108845-50108864 | Msa0332810:CDS | 35.0% |
| CAATTGATGAAGAGCTTCAA+AGG | - | chr2_4:50109133-50109152 | Msa0332810:intron | 35.0% | |
| ATAGTTGAGATAGTTAGCCA+TGG | + | chr2_4:50109286-50109305 | None:intergenic | 35.0% | |
| ACTTGGATCTCACTAATGTT+GGG | - | chr2_4:50109316-50109335 | Msa0332810:intron | 35.0% | |
| TATCACAAGTATAGAACGGT+TGG | + | chr2_4:50109379-50109398 | None:intergenic | 35.0% | |
| CCTCTATCACAAGTATAGAA+CGG | + | chr2_4:50109383-50109402 | None:intergenic | 35.0% | |
| GAACAACTTCATCTTCTTCT+CGG | + | chr2_4:50109434-50109453 | None:intergenic | 35.0% | |
| !! | TGTTCATAATGGGCACAATA+AGG | - | chr2_4:50109449-50109468 | Msa0332810:CDS | 35.0% |
| AATCATCTGCATGATTTAGC+CGG | - | chr2_4:50109577-50109596 | Msa0332810:CDS | 35.0% | |
| CTAAATATTATGTCCTCGTG+CGG | + | chr2_4:50109638-50109657 | None:intergenic | 35.0% | |
| ! | TGGTAAGATTTTGTCGACAA+TGG | - | chr2_4:50109678-50109697 | Msa0332810:CDS | 35.0% |
| ! | AAGATTTTGTCGACAATGGT+TGG | - | chr2_4:50109682-50109701 | Msa0332810:CDS | 35.0% |
| TGATGTCTGTTCATATCATG+GGG | - | chr2_4:50109780-50109799 | Msa0332810:CDS | 35.0% | |
| TTTCAACAGATGACACTTTC+GGG | - | chr2_4:50109875-50109894 | Msa0332810:CDS | 35.0% | |
| TCACAACAAATCACAAAGAC+AGG | - | chr2_4:50109957-50109976 | Msa0332810:CDS | 35.0% | |
| GTTCATGTTCAGTAATGCAA+AGG | + | chr2_4:50110078-50110097 | None:intergenic | 35.0% | |
| AGCAAAGAAGAACAAGATCT+AGG | - | chr2_4:50110262-50110281 | Msa0332810:CDS | 35.0% | |
| GATCTAGGCAGAGAAAATAT+AGG | - | chr2_4:50110277-50110296 | Msa0332810:CDS | 35.0% | |
| AGTTCGCATTAGTGCAATTG+AGG | + | chr2_4:50108563-50108582 | None:intergenic | 40.0% | |
| ! | ACAAAGTTTAGGACTTCACG+AGG | + | chr2_4:50108604-50108623 | None:intergenic | 40.0% |
| TGGTGAATTGTGCGTTGAAT+TGG | + | chr2_4:50108654-50108673 | None:intergenic | 40.0% | |
| ACATTATGATAGGGACTCCT+CGG | - | chr2_4:50108906-50108925 | Msa0332810:CDS | 40.0% | |
| ! | TTAGCTCTCTCCATCACATA+AGG | + | chr2_4:50109006-50109025 | None:intergenic | 40.0% |
| !! | GAGTGTTGAAACTCATTGGA+TGG | + | chr2_4:50109110-50109129 | None:intergenic | 40.0% |
| !! | GCAAGAGTGTTGAAACTCAT+TGG | + | chr2_4:50109114-50109133 | None:intergenic | 40.0% |
| !! | AAACGCGGTTACTTGTTGTA+TGG | - | chr2_4:50109225-50109244 | Msa0332810:intron | 40.0% |
| GACTTGGATCTCACTAATGT+TGG | - | chr2_4:50109315-50109334 | Msa0332810:intron | 40.0% | |
| CTTGGATCTCACTAATGTTG+GGG | - | chr2_4:50109317-50109336 | Msa0332810:intron | 40.0% | |
| CCGTTCTATACTTGTGATAG+AGG | - | chr2_4:50109380-50109399 | Msa0332810:CDS | 40.0% | |
| ! | ATGATTTAGCCGGCGAATTT+TGG | - | chr2_4:50109587-50109606 | Msa0332810:CDS | 40.0% |
| AACAAAGGACCAAAATTCGC+CGG | + | chr2_4:50109599-50109618 | None:intergenic | 40.0% | |
| GGACTATTGAATGCAGTAGA+TGG | - | chr2_4:50109896-50109915 | Msa0332810:CDS | 40.0% | |
| TGAATGCAGTAGATGGTCTT+TGG | - | chr2_4:50109903-50109922 | Msa0332810:CDS | 40.0% | |
| TCTGTTAAGACCTGGTAGAA+TGG | - | chr2_4:50109991-50110010 | Msa0332810:CDS | 40.0% | |
| ATTTGCTTGTCCATTCTACC+AGG | + | chr2_4:50110004-50110023 | None:intergenic | 40.0% | |
| AACTCTTCTGCAATTTCAGC+TGG | + | chr2_4:50110145-50110164 | None:intergenic | 40.0% | |
| GGAATTTGATAAGGTCTTGC+AGG | + | chr2_4:50110195-50110214 | None:intergenic | 40.0% | |
| ! | TGGCTTGGAGGAATTTGATA+AGG | + | chr2_4:50110204-50110223 | None:intergenic | 40.0% |
| ATTCCTCCAAGCCAAGAAAA+TGG | - | chr2_4:50110210-50110229 | Msa0332810:CDS | 40.0% | |
| AGTTCGCATTAGTGCAATTG+AGG | + | chr2_4:50108563-50108582 | None:intergenic | 40.0% | |
| ! | ACAAAGTTTAGGACTTCACG+AGG | + | chr2_4:50108604-50108623 | None:intergenic | 40.0% |
| TGGTGAATTGTGCGTTGAAT+TGG | + | chr2_4:50108654-50108673 | None:intergenic | 40.0% | |
| ACATTATGATAGGGACTCCT+CGG | - | chr2_4:50108906-50108925 | Msa0332810:CDS | 40.0% | |
| ! | TTAGCTCTCTCCATCACATA+AGG | + | chr2_4:50109006-50109025 | None:intergenic | 40.0% |
| !! | GAGTGTTGAAACTCATTGGA+TGG | + | chr2_4:50109110-50109129 | None:intergenic | 40.0% |
| !! | GCAAGAGTGTTGAAACTCAT+TGG | + | chr2_4:50109114-50109133 | None:intergenic | 40.0% |
| !! | AAACGCGGTTACTTGTTGTA+TGG | - | chr2_4:50109225-50109244 | Msa0332810:intron | 40.0% |
| GACTTGGATCTCACTAATGT+TGG | - | chr2_4:50109315-50109334 | Msa0332810:intron | 40.0% | |
| CTTGGATCTCACTAATGTTG+GGG | - | chr2_4:50109317-50109336 | Msa0332810:intron | 40.0% | |
| CCGTTCTATACTTGTGATAG+AGG | - | chr2_4:50109380-50109399 | Msa0332810:CDS | 40.0% | |
| ! | ATGATTTAGCCGGCGAATTT+TGG | - | chr2_4:50109587-50109606 | Msa0332810:CDS | 40.0% |
| AACAAAGGACCAAAATTCGC+CGG | + | chr2_4:50109599-50109618 | None:intergenic | 40.0% | |
| GGACTATTGAATGCAGTAGA+TGG | - | chr2_4:50109896-50109915 | Msa0332810:CDS | 40.0% | |
| TGAATGCAGTAGATGGTCTT+TGG | - | chr2_4:50109903-50109922 | Msa0332810:CDS | 40.0% | |
| TCTGTTAAGACCTGGTAGAA+TGG | - | chr2_4:50109991-50110010 | Msa0332810:CDS | 40.0% | |
| ATTTGCTTGTCCATTCTACC+AGG | + | chr2_4:50110004-50110023 | None:intergenic | 40.0% | |
| AACTCTTCTGCAATTTCAGC+TGG | + | chr2_4:50110145-50110164 | None:intergenic | 40.0% | |
| GGAATTTGATAAGGTCTTGC+AGG | + | chr2_4:50110195-50110214 | None:intergenic | 40.0% | |
| ! | TGGCTTGGAGGAATTTGATA+AGG | + | chr2_4:50110204-50110223 | None:intergenic | 40.0% |
| ATTCCTCCAAGCCAAGAAAA+TGG | - | chr2_4:50110210-50110229 | Msa0332810:CDS | 40.0% | |
| !! | CAAGCCAGTTTTATCTGCAG+TGG | - | chr2_4:50108537-50108556 | Msa0332810:CDS | 45.0% |
| CTTCTGCTGCCTCAAAAACT+TGG | + | chr2_4:50108711-50108730 | None:intergenic | 45.0% | |
| !! | TCTTATTTCTGACACAGCCG+AGG | + | chr2_4:50108926-50108945 | None:intergenic | 45.0% |
| ATAGAAGAACCGGGAAAGCT+TGG | - | chr2_4:50109202-50109221 | Msa0332810:intron | 45.0% | |
| !! | TACTTGTTGTATGGTCCTCC+TGG | - | chr2_4:50109234-50109253 | Msa0332810:intron | 45.0% |
| AACATGACTTATACCGCACG+AGG | - | chr2_4:50109622-50109641 | Msa0332810:CDS | 45.0% | |
| ! | TCGACAATGGTTGGTCAAGT+TGG | - | chr2_4:50109691-50109710 | Msa0332810:CDS | 45.0% |
| ! | CTCTTCCTGGACCATTTTCT+TGG | + | chr2_4:50110224-50110243 | None:intergenic | 45.0% |
| CTTCTCTCTTAGTCTCTTCC+TGG | + | chr2_4:50110237-50110256 | None:intergenic | 45.0% | |
| !! | CAAGCCAGTTTTATCTGCAG+TGG | - | chr2_4:50108537-50108556 | Msa0332810:CDS | 45.0% |
| CTTCTGCTGCCTCAAAAACT+TGG | + | chr2_4:50108711-50108730 | None:intergenic | 45.0% | |
| !! | TCTTATTTCTGACACAGCCG+AGG | + | chr2_4:50108926-50108945 | None:intergenic | 45.0% |
| ATAGAAGAACCGGGAAAGCT+TGG | - | chr2_4:50109202-50109221 | Msa0332810:intron | 45.0% | |
| !! | TACTTGTTGTATGGTCCTCC+TGG | - | chr2_4:50109234-50109253 | Msa0332810:intron | 45.0% |
| AACATGACTTATACCGCACG+AGG | - | chr2_4:50109622-50109641 | Msa0332810:CDS | 45.0% | |
| ! | TCGACAATGGTTGGTCAAGT+TGG | - | chr2_4:50109691-50109710 | Msa0332810:CDS | 45.0% |
| ! | CTCTTCCTGGACCATTTTCT+TGG | + | chr2_4:50110224-50110243 | None:intergenic | 45.0% |
| CTTCTCTCTTAGTCTCTTCC+TGG | + | chr2_4:50110237-50110256 | None:intergenic | 45.0% | |
| GAGGCCACTGCAGATAAAAC+TGG | + | chr2_4:50108544-50108563 | None:intergenic | 50.0% | |
| TTGTATGGTCCTCCTGGTAC+TGG | - | chr2_4:50109240-50109259 | Msa0332810:intron | 50.0% | |
| TGTATGGTCCTCCTGGTACT+GGG | - | chr2_4:50109241-50109260 | Msa0332810:intron | 50.0% | |
| AAGCTAGACTTCCCAGTACC+AGG | + | chr2_4:50109255-50109274 | None:intergenic | 50.0% | |
| ! | GTCTAGCTTGATTGCAGCCA+TGG | - | chr2_4:50109266-50109285 | Msa0332810:intron | 50.0% |
| GATCCTGCTCTGTTAAGACC+TGG | - | chr2_4:50109983-50110002 | Msa0332810:CDS | 50.0% | |
| CTACCAGGTCTTAACAGAGC+AGG | + | chr2_4:50109989-50110008 | None:intergenic | 50.0% | |
| !!! | GGACCATTTTCTTGGCTTGG+AGG | + | chr2_4:50110216-50110235 | None:intergenic | 50.0% |
| ! | CCTGGACCATTTTCTTGGCT+TGG | + | chr2_4:50110219-50110238 | None:intergenic | 50.0% |
| CCAAGCCAAGAAAATGGTCC+AGG | - | chr2_4:50110216-50110235 | Msa0332810:CDS | 50.0% | |
| GAGGCCACTGCAGATAAAAC+TGG | + | chr2_4:50108544-50108563 | None:intergenic | 50.0% | |
| TTGTATGGTCCTCCTGGTAC+TGG | - | chr2_4:50109240-50109259 | Msa0332810:intron | 50.0% | |
| TGTATGGTCCTCCTGGTACT+GGG | - | chr2_4:50109241-50109260 | Msa0332810:intron | 50.0% | |
| AAGCTAGACTTCCCAGTACC+AGG | + | chr2_4:50109255-50109274 | None:intergenic | 50.0% | |
| ! | GTCTAGCTTGATTGCAGCCA+TGG | - | chr2_4:50109266-50109285 | Msa0332810:intron | 50.0% |
| GATCCTGCTCTGTTAAGACC+TGG | - | chr2_4:50109983-50110002 | Msa0332810:CDS | 50.0% | |
| CTACCAGGTCTTAACAGAGC+AGG | + | chr2_4:50109989-50110008 | None:intergenic | 50.0% | |
| !!! | GGACCATTTTCTTGGCTTGG+AGG | + | chr2_4:50110216-50110235 | None:intergenic | 50.0% |
| ! | CCTGGACCATTTTCTTGGCT+TGG | + | chr2_4:50110219-50110238 | None:intergenic | 50.0% |
| CCAAGCCAAGAAAATGGTCC+AGG | - | chr2_4:50110216-50110235 | Msa0332810:CDS | 50.0% | |
| GAGGCAGCAGAAGCCTATCT+AGG | - | chr2_4:50108718-50108737 | Msa0332810:CDS | 55.0% | |
| ACCGGGAAAGCTTGGAAACG+CGG | - | chr2_4:50109210-50109229 | Msa0332810:intron | 55.0% | |
| ACCGCGTTTCCAAGCTTTCC+CGG | + | chr2_4:50109214-50109233 | None:intergenic | 55.0% | |
| CTAGACTTCCCAGTACCAGG+AGG | + | chr2_4:50109252-50109271 | None:intergenic | 55.0% | |
| GATGGTCTTTGGTCGTGCTG+TGG | - | chr2_4:50109914-50109933 | Msa0332810:CDS | 55.0% | |
| TCTTTGGTCGTGCTGTGGAG+AGG | - | chr2_4:50109919-50109938 | Msa0332810:CDS | 55.0% | |
| GAGGCAGCAGAAGCCTATCT+AGG | - | chr2_4:50108718-50108737 | Msa0332810:CDS | 55.0% | |
| ACCGGGAAAGCTTGGAAACG+CGG | - | chr2_4:50109210-50109229 | Msa0332810:intron | 55.0% | |
| ACCGCGTTTCCAAGCTTTCC+CGG | + | chr2_4:50109214-50109233 | None:intergenic | 55.0% | |
| CTAGACTTCCCAGTACCAGG+AGG | + | chr2_4:50109252-50109271 | None:intergenic | 55.0% | |
| GATGGTCTTTGGTCGTGCTG+TGG | - | chr2_4:50109914-50109933 | Msa0332810:CDS | 55.0% | |
| TCTTTGGTCGTGCTGTGGAG+AGG | - | chr2_4:50109919-50109938 | Msa0332810:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 50108505 | 50110312 | 50108505 | ID=Msa0332810;Name=Msa0332810 |
| chr2_4 | mRNA | 50108505 | 50110312 | 50108505 | ID=Msa0332810-mRNA-1;Parent=Msa0332810;Name=Msa0332810-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|1|0|1|1|1|2|0|464 |
| chr2_4 | exon | 50109347 | 50110312 | 50109347 | ID=Msa0332810-mRNA-1:exon:15009;Parent=Msa0332810-mRNA-1 |
| chr2_4 | exon | 50108505 | 50108933 | 50108505 | ID=Msa0332810-mRNA-1:exon:15008;Parent=Msa0332810-mRNA-1 |
| chr2_4 | CDS | 50109347 | 50110312 | 50109347 | ID=Msa0332810-mRNA-1:cds;Parent=Msa0332810-mRNA-1 |
| chr2_4 | CDS | 50108505 | 50108933 | 50108505 | ID=Msa0332810-mRNA-1:cds;Parent=Msa0332810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
