Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053780 | MCI39312.1 | 88.288 | 111 | 13 | 0 | 1 | 111 | 1 | 111 | 4.13e-63 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053780 | A0A392RSX5 | 88.288 | 111 | 13 | 0 | 1 | 111 | 1 | 111 | 1.97e-63 | 197 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0053780 | 0.803845 | 2.870560e-49 | -8.615850e-47 |
| Msa0001450 | Msa0053780 | 0.803696 | 3.082072e-49 | -8.615850e-47 |
| Msa0001780 | Msa0053780 | 0.803397 | 3.555336e-49 | -8.615850e-47 |
| Msa0003700 | Msa0053780 | 0.817842 | 2.674154e-52 | -8.615850e-47 |
| Msa0004880 | Msa0053780 | 0.806071 | 9.826969e-50 | -8.615850e-47 |
| Msa0015390 | Msa0053780 | 0.808486 | 3.025098e-50 | -8.615850e-47 |
| Msa0016670 | Msa0053780 | 0.807492 | 4.922302e-50 | -8.615850e-47 |
| Msa0017510 | Msa0053780 | 0.871483 | 6.604541e-67 | -8.615850e-47 |
| Msa0028640 | Msa0053780 | 0.827368 | 1.626376e-54 | -8.615850e-47 |
| Msa0031340 | Msa0053780 | 0.815972 | 7.030174e-52 | -8.615850e-47 |
| Msa0044020 | Msa0053780 | 0.822438 | 2.368863e-53 | -8.615850e-47 |
| Msa0046100 | Msa0053780 | 0.814531 | 1.469442e-51 | -8.615850e-47 |
| Msa0051790 | Msa0053780 | 0.812157 | 4.881731e-51 | -8.615850e-47 |
| Msa0053780 | Msa0053800 | 0.853191 | 2.812904e-61 | -8.615850e-47 |
| Msa0053780 | Msa0064350 | 0.802609 | 5.173531e-49 | -8.615850e-47 |
| Msa0053780 | Msa0068680 | 0.808112 | 3.633762e-50 | -8.615850e-47 |
| Msa0053780 | Msa0069330 | 0.842584 | 2.365508e-58 | -8.615850e-47 |
| Msa0053780 | Msa0072370 | 0.834044 | 3.761886e-56 | -8.615850e-47 |
| Msa0053780 | Msa0074240 | 0.801126 | 1.043193e-48 | -8.615850e-47 |
| Msa0053780 | Msa0078650 | 0.827808 | 1.274832e-54 | -8.615850e-47 |
| Msa0053780 | Msa0086650 | 0.802324 | 5.923061e-49 | -8.615850e-47 |
| Msa0053780 | Msa0089360 | 0.800521 | 1.386076e-48 | -8.615850e-47 |
| Msa0053780 | Msa0089630 | 0.807645 | 4.568143e-50 | -8.615850e-47 |
| Msa0053780 | Msa0090590 | 0.803658 | 3.137884e-49 | -8.615850e-47 |
| Msa0053780 | Msa0094120 | 0.811078 | 8.380734e-51 | -8.615850e-47 |
| Msa0053780 | Msa0097810 | 0.801014 | 1.099632e-48 | -8.615850e-47 |
| Msa0053780 | Msa0097840 | 0.800305 | 1.534028e-48 | -8.615850e-47 |
| Msa0053780 | Msa0104550 | 0.843112 | 1.711592e-58 | -8.615850e-47 |
| Msa0053780 | Msa0110970 | 0.879796 | 9.302115e-70 | -8.615850e-47 |
| Msa0053780 | Msa0114540 | -0.802776 | 4.777007e-49 | -8.615850e-47 |
| Msa0053780 | Msa0124340 | 0.837865 | 4.038582e-57 | -8.615850e-47 |
| Msa0053780 | Msa0126370 | 0.823339 | 1.460609e-53 | -8.615850e-47 |
| Msa0053780 | Msa0134610 | 0.814026 | 1.899747e-51 | -8.615850e-47 |
| Msa0053780 | Msa0140780 | 0.850201 | 1.979043e-60 | -8.615850e-47 |
| Msa0053780 | Msa0142950 | 0.820469 | 6.748391e-53 | -8.615850e-47 |
| Msa0053780 | Msa0146260 | 0.819251 | 1.281000e-52 | -8.615850e-47 |
| Msa0053780 | Msa0148090 | 0.800767 | 1.235011e-48 | -8.615850e-47 |
| Msa0053780 | Msa0148100 | 0.936353 | 1.988655e-97 | -8.615850e-47 |
| Msa0053780 | Msa0150570 | 0.817459 | 3.262118e-52 | -8.615850e-47 |
| Msa0053780 | Msa0152400 | 0.800322 | 1.521677e-48 | -8.615850e-47 |
| Msa0053780 | Msa0157290 | 0.872094 | 4.139517e-67 | -8.615850e-47 |
| Msa0053780 | Msa0159930 | 0.801443 | 8.980924e-49 | -8.615850e-47 |
| Msa0053780 | Msa0163980 | 0.816978 | 4.183893e-52 | -8.615850e-47 |
| Msa0053780 | Msa0171290 | 0.812090 | 5.050331e-51 | -8.615850e-47 |
| Msa0053780 | Msa0184960 | 0.818655 | 1.750304e-52 | -8.615850e-47 |
| Msa0053780 | Msa0186890 | 0.801523 | 8.651910e-49 | -8.615850e-47 |
| Msa0053780 | Msa0189290 | 0.800212 | 1.601999e-48 | -8.615850e-47 |
| Msa0053780 | Msa0195630 | 0.837448 | 5.166676e-57 | -8.615850e-47 |
| Msa0053780 | Msa0197930 | 0.831991 | 1.219590e-55 | -8.615850e-47 |
| Msa0053780 | Msa0200260 | 0.825126 | 5.556773e-54 | -8.615850e-47 |
| Msa0053780 | Msa0202950 | 0.805751 | 1.147512e-49 | -8.615850e-47 |
| Msa0053780 | Msa0205510 | 0.807187 | 5.714157e-50 | -8.615850e-47 |
| Msa0053780 | Msa0211150 | 0.802234 | 6.179044e-49 | -8.615850e-47 |
| Msa0053780 | Msa0212990 | 0.808126 | 3.609025e-50 | -8.615850e-47 |
| Msa0053780 | Msa0213520 | 0.812498 | 4.113925e-51 | -8.615850e-47 |
| Msa0053780 | Msa0216240 | 0.820557 | 6.439257e-53 | -8.615850e-47 |
| Msa0053780 | Msa0218780 | 0.811928 | 5.477137e-51 | -8.615850e-47 |
| Msa0053780 | Msa0220580 | 0.802712 | 4.925353e-49 | -8.615850e-47 |
| Msa0053780 | Msa0223690 | 0.805638 | 1.211991e-49 | -8.615850e-47 |
| Msa0053780 | Msa0225740 | 0.810547 | 1.091721e-50 | -8.615850e-47 |
| Msa0053780 | Msa0237410 | 0.831098 | 2.023063e-55 | -8.615850e-47 |
| Msa0053780 | Msa0238890 | 0.809039 | 2.304432e-50 | -8.615850e-47 |
| Msa0053780 | Msa0239570 | 0.809094 | 2.242113e-50 | -8.615850e-47 |
| Msa0053780 | Msa0243100 | 0.854987 | 8.535586e-62 | -8.615850e-47 |
| Msa0053780 | Msa0243710 | 0.804786 | 1.827221e-49 | -8.615850e-47 |
| Msa0053780 | Msa0244860 | 0.809949 | 1.469402e-50 | -8.615850e-47 |
| Msa0053780 | Msa0258310 | 0.801933 | 7.126789e-49 | -8.615850e-47 |
| Msa0053780 | Msa0259500 | 0.811891 | 5.579879e-51 | -8.615850e-47 |
| Msa0053780 | Msa0264150 | 0.815065 | 1.119071e-51 | -8.615850e-47 |
| Msa0053780 | Msa0267220 | 0.813002 | 3.189888e-51 | -8.615850e-47 |
| Msa0053780 | Msa0270320 | 0.804719 | 1.887205e-49 | -8.615850e-47 |
| Msa0053780 | Msa0274360 | 0.803838 | 2.878926e-49 | -8.615850e-47 |
| Msa0053780 | Msa0282250 | 0.810187 | 1.305938e-50 | -8.615850e-47 |
| Msa0053780 | Msa0283450 | 0.810608 | 1.059440e-50 | -8.615850e-47 |
| Msa0053780 | Msa0283520 | 0.822047 | 2.918975e-53 | -8.615850e-47 |
| Msa0053780 | Msa0284420 | 0.811694 | 6.157573e-51 | -8.615850e-47 |
| Msa0053780 | Msa0287650 | 0.869736 | 2.476504e-66 | -8.615850e-47 |
| Msa0053780 | Msa0292400 | 0.807412 | 5.118419e-50 | -8.615850e-47 |
| Msa0053780 | Msa0300120 | 0.814128 | 1.803578e-51 | -8.615850e-47 |
| Msa0053780 | Msa0300690 | 0.810068 | 1.385483e-50 | -8.615850e-47 |
| Msa0053780 | Msa0305700 | 0.815944 | 7.132411e-52 | -8.615850e-47 |
| Msa0053780 | Msa0308830 | 0.816914 | 4.326264e-52 | -8.615850e-47 |
| Msa0053780 | Msa0311700 | 0.819785 | 9.680229e-53 | -8.615850e-47 |
| Msa0053780 | Msa0314210 | 0.802918 | 4.465159e-49 | -8.615850e-47 |
| Msa0053780 | Msa0316810 | 0.812004 | 5.272416e-51 | -8.615850e-47 |
| Msa0053780 | Msa0317280 | 0.805315 | 1.416549e-49 | -8.615850e-47 |
| Msa0053780 | Msa0317340 | 0.823867 | 1.098890e-53 | -8.615850e-47 |
| Msa0053780 | Msa0320460 | 0.820401 | 6.992910e-53 | -8.615850e-47 |
| Msa0053780 | Msa0323610 | 0.804737 | 1.871171e-49 | -8.615850e-47 |
| Msa0053780 | Msa0332000 | 0.819403 | 1.182976e-52 | -8.615850e-47 |
| Msa0053780 | Msa0332810 | 0.800279 | 1.552499e-48 | -8.615850e-47 |
| Msa0053780 | Msa0333920 | 0.810108 | 1.357897e-50 | -8.615850e-47 |
| Msa0053780 | Msa0334040 | 0.823157 | 1.611431e-53 | -8.615850e-47 |
| Msa0053780 | Msa0334360 | 0.805855 | 1.091138e-49 | -8.615850e-47 |
| Msa0053780 | Msa0341050 | 0.814546 | 1.458410e-51 | -8.615850e-47 |
| Msa0053780 | Msa0341540 | 0.831150 | 1.965375e-55 | -8.615850e-47 |
| Msa0053780 | Msa0342360 | 0.810352 | 1.202693e-50 | -8.615850e-47 |
| Msa0053780 | Msa0345970 | 0.804372 | 2.229863e-49 | -8.615850e-47 |
| Msa0053780 | Msa0347770 | 0.807728 | 4.386108e-50 | -8.615850e-47 |
| Msa0053780 | Msa0363200 | 0.820757 | 5.795780e-53 | -8.615850e-47 |
| Msa0053780 | Msa0366240 | 0.814522 | 1.475882e-51 | -8.615850e-47 |
| Msa0053780 | Msa0369440 | 0.800456 | 1.429080e-48 | -8.615850e-47 |
| Msa0053780 | Msa0369850 | 0.812016 | 5.240473e-51 | -8.615850e-47 |
| Msa0053780 | Msa0376350 | 0.825434 | 4.697238e-54 | -8.615850e-47 |
| Msa0053780 | Msa0380300 | 0.800572 | 1.353664e-48 | -8.615850e-47 |
| Msa0053780 | Msa0389340 | 0.819910 | 9.063692e-53 | -8.615850e-47 |
| Msa0053780 | Msa0392510 | 0.802533 | 5.362863e-49 | -8.615850e-47 |
| Msa0053780 | Msa0393080 | 0.800054 | 1.725301e-48 | -8.615850e-47 |
| Msa0053780 | Msa0407920 | 0.801761 | 7.730054e-49 | -8.615850e-47 |
| Msa0053780 | Msa0410500 | 0.826429 | 2.725908e-54 | -8.615850e-47 |
| Msa0053780 | Msa0410650 | 0.846578 | 1.988876e-59 | -8.615850e-47 |
| Msa0053780 | Msa0417270 | 0.803720 | 3.046130e-49 | -8.615850e-47 |
| Msa0053780 | Msa0417880 | 0.844410 | 7.690533e-59 | -8.615850e-47 |
| Msa0053780 | Msa0422850 | 0.828326 | 9.568922e-55 | -8.615850e-47 |
| Msa0053780 | Msa0422930 | 0.827646 | 1.394765e-54 | -8.615850e-47 |
| Msa0053780 | Msa0424790 | 0.819288 | 1.256722e-52 | -8.615850e-47 |
| Msa0053780 | Msa0440750 | 0.824650 | 7.195233e-54 | -8.615850e-47 |
| Msa0053780 | Msa0442670 | 0.804266 | 2.345564e-49 | -8.615850e-47 |
| Msa0053780 | Msa0449830 | 0.804887 | 1.741052e-49 | -8.615850e-47 |
| Msa0053780 | Msa0461720 | 0.872816 | 2.377318e-67 | -8.615850e-47 |
| Msa0053780 | Msa0461730 | 0.814156 | 1.778505e-51 | -8.615850e-47 |
| Msa0053780 | Msa0464680 | 0.800511 | 1.392997e-48 | -8.615850e-47 |
| Msa0053780 | Msa0467430 | 0.815362 | 9.609279e-52 | -8.615850e-47 |
| Msa0053780 | Msa0474950 | 0.817032 | 4.068622e-52 | -8.615850e-47 |
| Msa0053780 | Msa0475790 | 0.839715 | 1.342455e-57 | -8.615850e-47 |
| Msa0053780 | Msa0479170 | 0.805763 | 1.140969e-49 | -8.615850e-47 |
| Msa0053780 | Msa0484780 | 0.825443 | 4.675298e-54 | -8.615850e-47 |
| Msa0053780 | Msa0487630 | 0.805255 | 1.458008e-49 | -8.615850e-47 |
| Msa0053780 | Msa0488400 | 0.812166 | 4.860527e-51 | -8.615850e-47 |
| Msa0053780 | Msa0495320 | 0.842918 | 1.928492e-58 | -8.615850e-47 |
| Msa0053780 | Msa0495330 | 0.803986 | 2.682269e-49 | -8.615850e-47 |
| Msa0053780 | Msa0498060 | 0.806421 | 8.294364e-50 | -8.615850e-47 |
| Msa0053780 | Msa0503580 | 0.822267 | 2.595851e-53 | -8.615850e-47 |
| Msa0053780 | Msa0507680 | 0.854034 | 1.610070e-61 | -8.615850e-47 |
| Msa0053780 | Msa0509610 | 0.828842 | 7.180861e-55 | -8.615850e-47 |
| Msa0053780 | Msa0513160 | 0.808808 | 2.581813e-50 | -8.615850e-47 |
| Msa0053780 | Msa0515010 | 0.804554 | 2.042911e-49 | -8.615850e-47 |
| Msa0053780 | Msa0516170 | 0.808240 | 3.412581e-50 | -8.615850e-47 |
| Msa0053780 | Msa0523460 | 0.827925 | 1.194947e-54 | -8.615850e-47 |
| Msa0053780 | Msa0524500 | 0.817529 | 3.146355e-52 | -8.615850e-47 |
| Msa0053780 | Msa0527550 | 0.825423 | 4.726988e-54 | -8.615850e-47 |
| Msa0053780 | Msa0541860 | 0.800623 | 1.321657e-48 | -8.615850e-47 |
| Msa0053780 | Msa0545070 | 0.809818 | 1.568238e-50 | -8.615850e-47 |
| Msa0053780 | Msa0546680 | 0.815147 | 1.073025e-51 | -8.615850e-47 |
| Msa0053780 | Msa0547890 | 0.817644 | 2.962998e-52 | -8.615850e-47 |
| Msa0053780 | Msa0550430 | 0.804556 | 2.040965e-49 | -8.615850e-47 |
| Msa0053780 | Msa0552810 | 0.807726 | 4.391004e-50 | -8.615850e-47 |
| Msa0053780 | Msa0571140 | 0.800015 | 1.757271e-48 | -8.615850e-47 |
| Msa0053780 | Msa0574890 | 0.828510 | 8.635631e-55 | -8.615850e-47 |
| Msa0053780 | Msa0597330 | 0.812020 | 5.230317e-51 | -8.615850e-47 |
| Msa0053780 | Msa0601750 | 0.807433 | 5.067952e-50 | -8.615850e-47 |
| Msa0053780 | Msa0602870 | 0.812124 | 4.965270e-51 | -8.615850e-47 |
| Msa0053780 | Msa0616160 | 0.804488 | 2.109030e-49 | -8.615850e-47 |
| Msa0053780 | Msa0627450 | 0.811159 | 8.047227e-51 | -8.615850e-47 |
| Msa0053780 | Msa0638070 | 0.829559 | 4.811602e-55 | -8.615850e-47 |
| Msa0053780 | Msa0641190 | 0.809154 | 2.176624e-50 | -8.615850e-47 |
| Msa0053780 | Msa0643890 | 0.834328 | 3.194721e-56 | -8.615850e-47 |
| Msa0053780 | Msa0647980 | 0.803882 | 2.820156e-49 | -8.615850e-47 |
| Msa0053780 | Msa0655560 | 0.800438 | 1.441339e-48 | -8.615850e-47 |
| Msa0053780 | Msa0657970 | 0.833103 | 6.462188e-56 | -8.615850e-47 |
| Msa0053780 | Msa0662500 | 0.830331 | 3.118443e-55 | -8.615850e-47 |
| Msa0053780 | Msa0667050 | 0.805389 | 1.366574e-49 | -8.615850e-47 |
| Msa0053780 | Msa0669320 | 0.813203 | 2.882819e-51 | -8.615850e-47 |
| Msa0053780 | Msa0677410 | 0.803867 | 2.839914e-49 | -8.615850e-47 |
| Msa0053780 | Msa0682330 | 0.800253 | 1.571748e-48 | -8.615850e-47 |
| Msa0053780 | Msa0683510 | 0.807884 | 4.063105e-50 | -8.615850e-47 |
| Msa0053780 | Msa0683730 | 0.814052 | 1.874860e-51 | -8.615850e-47 |
| Msa0053780 | Msa0684500 | 0.814453 | 1.528760e-51 | -8.615850e-47 |
| Msa0053780 | Msa0688770 | 0.801596 | 8.355096e-49 | -8.615850e-47 |
| Msa0053780 | Msa0691380 | 0.800408 | 1.461833e-48 | -8.615850e-47 |
| Msa0053780 | Msa0692080 | 0.801716 | 7.896717e-49 | -8.615850e-47 |
| Msa0053780 | Msa0692230 | 0.810184 | 1.307764e-50 | -8.615850e-47 |
| Msa0053780 | Msa0696640 | 0.802916 | 4.471261e-49 | -8.615850e-47 |
| Msa0053780 | Msa0703230 | 0.803633 | 3.176653e-49 | -8.615850e-47 |
| Msa0053780 | Msa0708520 | 0.842133 | 3.113680e-58 | -8.615850e-47 |
| Msa0053780 | Msa0713820 | 0.802691 | 4.975284e-49 | -8.615850e-47 |
| Msa0053780 | Msa0720820 | 0.815016 | 1.147134e-51 | -8.615850e-47 |
| Msa0053780 | Msa0727710 | 0.806418 | 8.306720e-50 | -8.615850e-47 |
| Msa0053780 | Msa0729720 | 0.809093 | 2.243902e-50 | -8.615850e-47 |
| Msa0053780 | Msa0730430 | 0.809204 | 2.124419e-50 | -8.615850e-47 |
| Msa0053780 | Msa0740510 | 0.809620 | 1.729272e-50 | -8.615850e-47 |
| Msa0053780 | Msa0740640 | 0.811654 | 6.284374e-51 | -8.615850e-47 |
| Msa0053780 | Msa0741240 | 0.819038 | 1.432667e-52 | -8.615850e-47 |
| Msa0053780 | Msa0743720 | 0.813042 | 3.126670e-51 | -8.615850e-47 |
| Msa0053780 | Msa0749760 | 0.820332 | 7.254799e-53 | -8.615850e-47 |
| Msa0053780 | Msa0754520 | 0.809949 | 1.469015e-50 | -8.615850e-47 |
| Msa0053780 | Msa0761940 | 0.807405 | 5.137008e-50 | -8.615850e-47 |
| Msa0053780 | Msa0762970 | 0.802000 | 6.903415e-49 | -8.615850e-47 |
| Msa0053780 | Msa0763020 | 0.800931 | 1.143110e-48 | -8.615850e-47 |
| Msa0053780 | Msa0763070 | 0.806639 | 7.459175e-50 | -8.615850e-47 |
| Msa0053780 | Msa0765910 | 0.809797 | 1.584366e-50 | -8.615850e-47 |
| Msa0053780 | Msa0770080 | 0.807981 | 3.875389e-50 | -8.615850e-47 |
| Msa0053780 | Msa0770720 | 0.807345 | 5.288323e-50 | -8.615850e-47 |
| Msa0053780 | Msa0801760 | 0.805309 | 1.420956e-49 | -8.615850e-47 |
| Msa0053780 | Msa0803890 | 0.810734 | 9.948996e-51 | -8.615850e-47 |
| Msa0053780 | Msa0806800 | 0.803710 | 3.060651e-49 | -8.615850e-47 |
| Msa0053780 | Msa0810480 | 0.814969 | 1.175315e-51 | -8.615850e-47 |
| Msa0053780 | Msa0820770 | 0.815289 | 9.977573e-52 | -8.615850e-47 |
| Msa0053780 | Msa0824660 | 0.810237 | 1.273982e-50 | -8.615850e-47 |
| Msa0053780 | Msa0824680 | 0.822874 | 1.875704e-53 | -8.615850e-47 |
| Msa0053780 | Msa0826130 | 0.823510 | 1.332788e-53 | -8.615850e-47 |
| Msa0053780 | Msa0828560 | 0.834491 | 2.905966e-56 | -8.615850e-47 |
| Msa0053780 | Msa0833220 | 0.814892 | 1.222261e-51 | -8.615850e-47 |
| Msa0053780 | Msa0835280 | 0.813586 | 2.374439e-51 | -8.615850e-47 |
| Msa0053780 | Msa0841940 | 0.819039 | 1.431434e-52 | -8.615850e-47 |
| Msa0053780 | Msa0844240 | 0.811541 | 6.650577e-51 | -8.615850e-47 |
| Msa0053780 | Msa0849100 | 0.808655 | 2.783689e-50 | -8.615850e-47 |
| Msa0053780 | Msa0861090 | 0.812700 | 3.715655e-51 | -8.615850e-47 |
| Msa0053780 | Msa0861870 | 0.834007 | 3.844884e-56 | -8.615850e-47 |
| Msa0053780 | Msa0863870 | 0.803855 | 2.856069e-49 | -8.615850e-47 |
| Msa0053780 | Msa0863920 | 0.801307 | 9.578986e-49 | -8.615850e-47 |
| Msa0053780 | Msa0866270 | 0.818997 | 1.463805e-52 | -8.615850e-47 |
| Msa0053780 | Msa0869100 | 0.807599 | 4.672265e-50 | -8.615850e-47 |
| Msa0053780 | Msa0869450 | 0.803680 | 3.106270e-49 | -8.615850e-47 |
| Msa0053780 | Msa0876200 | 0.809868 | 1.529287e-50 | -8.615850e-47 |
| Msa0053780 | Msa0878290 | 0.829383 | 5.309003e-55 | -8.615850e-47 |
| Msa0053780 | Msa0880140 | 0.869613 | 2.716139e-66 | -8.615850e-47 |
| Msa0053780 | Msa0888530 | 0.820762 | 5.777828e-53 | -8.615850e-47 |
| Msa0053780 | Msa0893800 | 0.802701 | 4.951164e-49 | -8.615850e-47 |
| Msa0053780 | Msa0896540 | 0.810826 | 9.502756e-51 | -8.615850e-47 |
| Msa0053780 | Msa0902760 | 0.810858 | 9.352721e-51 | -8.615850e-47 |
| Msa0053780 | Msa0924470 | 0.826116 | 3.236942e-54 | -8.615850e-47 |
| Msa0053780 | Msa0930780 | 0.826247 | 3.011573e-54 | -8.615850e-47 |
| Msa0053780 | Msa0933230 | 0.809804 | 1.578850e-50 | -8.615850e-47 |
| Msa0053780 | Msa0933310 | 0.809054 | 2.286701e-50 | -8.615850e-47 |
| Msa0053780 | Msa0944030 | 0.823678 | 1.217162e-53 | -8.615850e-47 |
| Msa0053780 | Msa0945110 | 0.800302 | 1.535937e-48 | -8.615850e-47 |
| Msa0053780 | Msa0963270 | 0.803315 | 3.696859e-49 | -8.615850e-47 |
| Msa0053780 | Msa0971090 | 0.806686 | 7.293565e-50 | -8.615850e-47 |
| Msa0053780 | Msa0972100 | 0.825250 | 5.192577e-54 | -8.615850e-47 |
| Msa0053780 | Msa0997970 | 0.814452 | 1.529834e-51 | -8.615850e-47 |
| Msa0053780 | Msa1003750 | 0.806023 | 1.006209e-49 | -8.615850e-47 |
| Msa0053780 | Msa1004550 | 0.832472 | 9.272916e-56 | -8.615850e-47 |
| Msa0053780 | Msa1004600 | 0.834624 | 2.690752e-56 | -8.615850e-47 |
| Msa0053780 | Msa1010350 | 0.811066 | 8.430707e-51 | -8.615850e-47 |
| Msa0053780 | Msa1013400 | 0.815115 | 1.090526e-51 | -8.615850e-47 |
| Msa0053780 | Msa1013770 | 0.807203 | 5.668325e-50 | -8.615850e-47 |
| Msa0053780 | Msa1019430 | 0.808305 | 3.306474e-50 | -8.615850e-47 |
| Msa0053780 | Msa1019470 | 0.814793 | 1.285367e-51 | -8.615850e-47 |
| Msa0053780 | Msa1030970 | 0.806917 | 6.518088e-50 | -8.615850e-47 |
| Msa0053780 | Msa1031930 | 0.822391 | 2.428551e-53 | -8.615850e-47 |
| Msa0053780 | Msa1040400 | 0.822751 | 2.003544e-53 | -8.615850e-47 |
| Msa0053780 | Msa1045200 | 0.812363 | 4.402542e-51 | -8.615850e-47 |
| Msa0053780 | Msa1046280 | 0.801236 | 9.902630e-49 | -8.615850e-47 |
| Msa0053780 | Msa1047980 | 0.808613 | 2.841753e-50 | -8.615850e-47 |
| Msa0053780 | Msa1063950 | 0.834570 | 2.777384e-56 | -8.615850e-47 |
| Msa0053780 | Msa1075540 | 0.808342 | 3.247382e-50 | -8.615850e-47 |
| Msa0053780 | Msa1078170 | 0.803072 | 4.150025e-49 | -8.615850e-47 |
| Msa0053780 | Msa1079590 | 0.814229 | 1.713654e-51 | -8.615850e-47 |
| Msa0053780 | Msa1079740 | 0.812849 | 3.445872e-51 | -8.615850e-47 |
| Msa0053780 | Msa1082500 | 0.845980 | 2.894416e-59 | -8.615850e-47 |
| Msa0053780 | Msa1083150 | 0.804793 | 1.821754e-49 | -8.615850e-47 |
| Msa0053780 | Msa1085200 | 0.850429 | 1.708142e-60 | -8.615850e-47 |
| Msa0053780 | Msa1085300 | 0.800463 | 1.424178e-48 | -8.615850e-47 |
| Msa0053780 | Msa1093530 | 0.809884 | 1.517382e-50 | -8.615850e-47 |
| Msa0053780 | Msa1093840 | 0.819731 | 9.957744e-53 | -8.615850e-47 |
| Msa0053780 | Msa1102770 | 0.816221 | 6.184795e-52 | -8.615850e-47 |
| Msa0053780 | Msa1108160 | 0.825179 | 5.396380e-54 | -8.615850e-47 |
| Msa0053780 | Msa1123380 | 0.818681 | 1.726424e-52 | -8.615850e-47 |
| Msa0053780 | Msa1125000 | 0.819389 | 1.191917e-52 | -8.615850e-47 |
| Msa0053780 | Msa1127890 | 0.829053 | 6.383059e-55 | -8.615850e-47 |
| Msa0053780 | Msa1127950 | 0.800580 | 1.348020e-48 | -8.615850e-47 |
| Msa0053780 | Msa1128710 | 0.820530 | 6.533543e-53 | -8.615850e-47 |
| Msa0053780 | Msa1131220 | 0.812809 | 3.516854e-51 | -8.615850e-47 |
| Msa0053780 | Msa1133710 | 0.803096 | 4.104151e-49 | -8.615850e-47 |
| Msa0053780 | Msa1134110 | 0.805066 | 1.596899e-49 | -8.615850e-47 |
| Msa0053780 | Msa1137570 | 0.801657 | 8.119009e-49 | -8.615850e-47 |
| Msa0053780 | Msa1139810 | 0.822484 | 2.311784e-53 | -8.615850e-47 |
| Msa0053780 | Msa1140210 | 0.816998 | 4.141085e-52 | -8.615850e-47 |
| Msa0053780 | Msa1140690 | 0.801437 | 9.009543e-49 | -8.615850e-47 |
| Msa0053780 | Msa1147900 | 0.805956 | 1.039354e-49 | -8.615850e-47 |
| Msa0053780 | Msa1151910 | 0.852018 | 6.080068e-61 | -8.615850e-47 |
| Msa0053780 | Msa1154030 | 0.812814 | 3.507611e-51 | -8.615850e-47 |
| Msa0053780 | Msa1165870 | 0.822287 | 2.568652e-53 | -8.615850e-47 |
| Msa0053780 | Msa1170280 | 0.801727 | 7.855621e-49 | -8.615850e-47 |
| Msa0053780 | Msa1172450 | 0.834599 | 2.731002e-56 | -8.615850e-47 |
| Msa0053780 | Msa1172670 | 0.809121 | 2.212706e-50 | -8.615850e-47 |
| Msa0053780 | Msa1179460 | 0.818331 | 2.072624e-52 | -8.615850e-47 |
| Msa0053780 | Msa1183120 | 0.800402 | 1.465515e-48 | -8.615850e-47 |
| Msa0053780 | Msa1189070 | 0.800895 | 1.162579e-48 | -8.615850e-47 |
| Msa0053780 | Msa1193290 | 0.816483 | 5.404342e-52 | -8.615850e-47 |
| Msa0053780 | Msa1197060 | 0.808186 | 3.504880e-50 | -8.615850e-47 |
| Msa0053780 | Msa1199570 | 0.800170 | 1.634438e-48 | -8.615850e-47 |
| Msa0053780 | Msa1201470 | 0.811811 | 5.807947e-51 | -8.615850e-47 |
| Msa0053780 | Msa1211150 | -0.801204 | 1.005231e-48 | -8.615850e-47 |
| Msa0053780 | Msa1214890 | 0.815382 | 9.513868e-52 | -8.615850e-47 |
| Msa0053780 | Msa1218600 | 0.820345 | 7.204162e-53 | -8.615850e-47 |
| Msa0053780 | Msa1221060 | 0.805826 | 1.106674e-49 | -8.615850e-47 |
| Msa0053780 | Msa1228210 | 0.823273 | 1.514078e-53 | -8.615850e-47 |
| Msa0053780 | Msa1236100 | 0.806545 | 7.809542e-50 | -8.615850e-47 |
| Msa0053780 | Msa1238930 | 0.803264 | 3.787704e-49 | -8.615850e-47 |
| Msa0053780 | Msa1242220 | 0.809117 | 2.217594e-50 | -8.615850e-47 |
| Msa0053780 | Msa1242230 | 0.824635 | 7.254258e-54 | -8.615850e-47 |
| Msa0053780 | Msa1242240 | 0.826540 | 2.565604e-54 | -8.615850e-47 |
| Msa0053780 | Msa1244610 | 0.800281 | 1.551293e-48 | -8.615850e-47 |
| Msa0053780 | Msa1251160 | 0.803053 | 4.187442e-49 | -8.615850e-47 |
| Msa0053780 | Msa1254510 | 0.801284 | 9.680863e-49 | -8.615850e-47 |
| Msa0053780 | Msa1269080 | 0.805927 | 1.054004e-49 | -8.615850e-47 |
| Msa0053780 | Msa1271280 | 0.817435 | 3.303480e-52 | -8.615850e-47 |
| Msa0053780 | Msa1271300 | 0.808200 | 3.481108e-50 | -8.615850e-47 |
| Msa0053780 | Msa1271990 | 0.811377 | 7.218018e-51 | -8.615850e-47 |
| Msa0053780 | Msa1272900 | 0.809943 | 1.473535e-50 | -8.615850e-47 |
| Msa0053780 | Msa1276660 | 0.806869 | 6.671997e-50 | -8.615850e-47 |
| Msa0053780 | Msa1278840 | 0.803541 | 3.318232e-49 | -8.615850e-47 |
| Msa0053780 | Msa1279400 | 0.803146 | 4.006599e-49 | -8.615850e-47 |
| Msa0053780 | Msa1283840 | 0.829476 | 5.038518e-55 | -8.615850e-47 |
| Msa0053780 | Msa1283860 | 0.816316 | 5.887414e-52 | -8.615850e-47 |
| Msa0053780 | Msa1284260 | 0.821774 | 3.376742e-53 | -8.615850e-47 |
| Msa0053780 | Msa1284550 | 0.805971 | 1.031539e-49 | -8.615850e-47 |
| Msa0053780 | Msa1292830 | 0.808974 | 2.379241e-50 | -8.615850e-47 |
| Msa0053780 | Msa1293770 | 0.819199 | 1.316300e-52 | -8.615850e-47 |
| Msa0053780 | Msa1300490 | 0.800625 | 1.319943e-48 | -8.615850e-47 |
| Msa0053780 | Msa1303240 | 0.809452 | 1.879148e-50 | -8.615850e-47 |
| Msa0053780 | Msa1303250 | 0.828567 | 8.369057e-55 | -8.615850e-47 |
| Msa0053780 | Msa1305710 | 0.801199 | 1.007649e-48 | -8.615850e-47 |
| Msa0053780 | Msa1306850 | 0.803854 | 2.858198e-49 | -8.615850e-47 |
| Msa0053780 | Msa1308380 | 0.826651 | 2.413915e-54 | -8.615850e-47 |
| Msa0053780 | Msa1318240 | 0.801971 | 6.998866e-49 | -8.615850e-47 |
| Msa0053780 | Msa1320740 | 0.811172 | 7.997289e-51 | -8.615850e-47 |
| Msa0053780 | Msa1322860 | 0.813976 | 1.948304e-51 | -8.615850e-47 |
| Msa0053780 | Msa1324500 | 0.804432 | 2.166329e-49 | -8.615850e-47 |
| Msa0053780 | Msa1327050 | 0.805834 | 1.102412e-49 | -8.615850e-47 |
| Msa0053780 | Msa1327680 | 0.819754 | 9.838401e-53 | -8.615850e-47 |
| Msa0053780 | Msa1328710 | 0.810556 | 1.086884e-50 | -8.615850e-47 |
| Msa0053780 | Msa1331910 | 0.813298 | 2.747823e-51 | -8.615850e-47 |
| Msa0053780 | Msa1336710 | 0.810226 | 1.280973e-50 | -8.615850e-47 |
| Msa0053780 | Msa1340650 | 0.810110 | 1.356772e-50 | -8.615850e-47 |
| Msa0053780 | Msa1342900 | 0.809788 | 1.591347e-50 | -8.615850e-47 |
| Msa0053780 | Msa1345360 | 0.802024 | 6.826110e-49 | -8.615850e-47 |
| Msa0053780 | Msa1346370 | 0.820981 | 5.145859e-53 | -8.615850e-47 |
| Msa0053780 | Msa1351450 | 0.806422 | 8.291413e-50 | -8.615850e-47 |
| Msa0053780 | Msa1351760 | 0.811182 | 7.954686e-51 | -8.615850e-47 |
| Msa0053780 | Msa1353470 | 0.819872 | 9.246482e-53 | -8.615850e-47 |
| Msa0053780 | Msa1353980 | 0.819743 | 9.895403e-53 | -8.615850e-47 |
| Msa0053780 | Msa1357240 | 0.810497 | 1.119322e-50 | -8.615850e-47 |
| Msa0053780 | Msa1361410 | 0.810428 | 1.158200e-50 | -8.615850e-47 |
| Msa0053780 | Msa1367370 | 0.800508 | 1.394385e-48 | -8.615850e-47 |
| Msa0053780 | Msa1372760 | 0.809363 | 1.963158e-50 | -8.615850e-47 |
| Msa0053780 | Msa1374040 | 0.825652 | 4.171508e-54 | -8.615850e-47 |
| Msa0053780 | Msa1374550 | 0.848791 | 4.893056e-60 | -8.615850e-47 |
| Msa0053780 | Msa1382540 | 0.803571 | 3.272306e-49 | -8.615850e-47 |
| Msa0053780 | Msa1384350 | 0.825752 | 3.948869e-54 | -8.615850e-47 |
| Msa0053780 | Msa1397810 | 0.803002 | 4.291047e-49 | -8.615850e-47 |
| Msa0053780 | Msa1409870 | 0.814068 | 1.859746e-51 | -8.615850e-47 |
| Msa0053780 | Msa1411700 | 0.811956 | 5.401260e-51 | -8.615850e-47 |
| Msa0053780 | Msa1422580 | 0.841189 | 5.524877e-58 | -8.615850e-47 |
| Msa0053780 | Msa1424450 | 0.807393 | 5.168017e-50 | -8.615850e-47 |
| Msa0053780 | Msa1430240 | 0.808011 | 3.818098e-50 | -8.615850e-47 |
| Msa0053780 | Msa1436570 | 0.800499 | 1.400290e-48 | -8.615850e-47 |
| Msa0053780 | Msa1445190 | 0.803295 | 3.732039e-49 | -8.615850e-47 |
| Msa0053780 | Msa1446830 | 0.803481 | 3.415646e-49 | -8.615850e-47 |
| Msa0053780 | Msa1451160 | 0.816195 | 6.267589e-52 | -8.615850e-47 |
| Msa0053780 | Msa1452240 | 0.815003 | 1.155024e-51 | -8.615850e-47 |
| Msa0053780 | Msa1454120 | 0.801070 | 1.070840e-48 | -8.615850e-47 |
| Msa0053780 | Msa1457910 | 0.804360 | 2.242296e-49 | -8.615850e-47 |
| Msa0053780 | Msa1459180 | 0.818209 | 2.208914e-52 | -8.615850e-47 |
| Msa0053780 | Msa1460020 | 0.825456 | 4.641512e-54 | -8.615850e-47 |
| Msa0053780 | Msa1461300 | 0.805447 | 1.329341e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053780 | MtrunA17_Chr1g0150981 | 94.595 | 111 | 6 | 0 | 1 | 111 | 1 | 111 | 1.44e-63 | 188 |
| Msa0053780 | MtrunA17_Chr1g0151011 | 93.694 | 111 | 7 | 0 | 1 | 111 | 1 | 111 | 7.56e-62 | 184 |
| Msa0053780 | MtrunA17_Chr3g0136311 | 61.607 | 112 | 42 | 1 | 1 | 111 | 1 | 112 | 1.60e-35 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 15 sgRNAs with CRISPR-Local
Find 18 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCAATTAGTGTTACTTTA+TGG | 0.143171 | 1_2:+8273380 | Msa0053780:CDS |
| TCACAAGGTTTGATCGTAAT+TGG | 0.180827 | 1_2:+8273467 | Msa0053780:CDS |
| CATAGAGTTGGTGGTTCTTC+TGG | 0.232310 | 1_2:+8273493 | Msa0053780:CDS |
| TTTACCCTCCTATTTGCTTC+AGG | 0.281136 | 1_2:-8273247 | None:intergenic |
| AACCATAAAGTAACACTAAT+TGG | 0.291426 | 1_2:-8273382 | None:intergenic |
| TGCTAGAACTACTAAGCTTA+TGG | 0.394299 | 1_2:-8273299 | None:intergenic |
| GAATGGAACCTGAAGCAAAT+AGG | 0.404269 | 1_2:+8273239 | None:intergenic |
| AATTGGATTCATAGAGTTGG+TGG | 0.508625 | 1_2:+8273484 | Msa0053780:CDS |
| GATCTGTTATCTATGTATAG+AGG | 0.518663 | 1_2:-8273331 | None:intergenic |
| TAACAGATCAGAGAGTGAGT+TGG | 0.526376 | 1_2:+8273345 | Msa0053780:CDS |
| CGTAATTGGATTCATAGAGT+TGG | 0.545772 | 1_2:+8273481 | Msa0053780:CDS |
| AGAGTTGGTGGTTCTTCTGG+TGG | 0.546860 | 1_2:+8273496 | Msa0053780:CDS |
| TGGAACCTGAAGCAAATAGG+AGG | 0.590316 | 1_2:+8273242 | Msa0053780:CDS |
| GGAACCTGAAGCAAATAGGA+GGG | 0.643854 | 1_2:+8273243 | Msa0053780:CDS |
| AAGCTTAGTAGTTCTAGCAG+TGG | 0.645576 | 1_2:+8273303 | Msa0053780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACCAATTAGTGTTACTTTA+TGG | + | chr1_2:8273380-8273399 | Msa0053780:CDS | 25.0% |
| ! | AACCATAAAGTAACACTAAT+TGG | - | chr1_2:8273385-8273404 | None:intergenic | 25.0% |
| GATCTGTTATCTATGTATAG+AGG | - | chr1_2:8273334-8273353 | None:intergenic | 30.0% | |
| !!! | CATAGCTTTATCAGCTTTTT+TGG | + | chr1_2:8273435-8273454 | Msa0053780:CDS | 30.0% |
| TGCTAGAACTACTAAGCTTA+TGG | - | chr1_2:8273302-8273321 | None:intergenic | 35.0% | |
| !!! | ACCTATGCTGCTTTTTGTAT+TGG | + | chr1_2:8273405-8273424 | Msa0053780:CDS | 35.0% |
| ACCAATACAAAAAGCAGCAT+AGG | - | chr1_2:8273409-8273428 | None:intergenic | 35.0% | |
| TCACAAGGTTTGATCGTAAT+TGG | + | chr1_2:8273467-8273486 | Msa0053780:CDS | 35.0% | |
| CGTAATTGGATTCATAGAGT+TGG | + | chr1_2:8273481-8273500 | Msa0053780:CDS | 35.0% | |
| AATTGGATTCATAGAGTTGG+TGG | + | chr1_2:8273484-8273503 | Msa0053780:CDS | 35.0% | |
| TTTACCCTCCTATTTGCTTC+AGG | - | chr1_2:8273250-8273269 | None:intergenic | 40.0% | |
| !! | AAGCTTAGTAGTTCTAGCAG+TGG | + | chr1_2:8273303-8273322 | Msa0053780:CDS | 40.0% |
| TAACAGATCAGAGAGTGAGT+TGG | + | chr1_2:8273345-8273364 | Msa0053780:CDS | 40.0% | |
| ! | TTTTGGACAAGAGCTTCACA+AGG | + | chr1_2:8273452-8273471 | Msa0053780:CDS | 40.0% |
| TGGAACCTGAAGCAAATAGG+AGG | + | chr1_2:8273242-8273261 | Msa0053780:CDS | 45.0% | |
| GGAACCTGAAGCAAATAGGA+GGG | + | chr1_2:8273243-8273262 | Msa0053780:CDS | 45.0% | |
| !! | CATAGAGTTGGTGGTTCTTC+TGG | + | chr1_2:8273493-8273512 | Msa0053780:CDS | 45.0% |
| !! | AGAGTTGGTGGTTCTTCTGG+TGG | + | chr1_2:8273496-8273515 | Msa0053780:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 8273241 | 8273576 | 8273241 | ID=Msa0053780;Name=Msa0053780 |
| chr1_2 | mRNA | 8273241 | 8273576 | 8273241 | ID=Msa0053780-mRNA-1;Parent=Msa0053780;Name=Msa0053780-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|111 |
| chr1_2 | exon | 8273241 | 8273576 | 8273241 | ID=Msa0053780-mRNA-1:exon:2935;Parent=Msa0053780-mRNA-1 |
| chr1_2 | CDS | 8273241 | 8273576 | 8273241 | ID=Msa0053780-mRNA-1:cds;Parent=Msa0053780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
