AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1172450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1172450 MtrunA17_Chr1g0179191 95.769 520 11 4 1 518 1 511 0.0 1025
Msa1172450 MtrunA17_Chr7g0265831 51.009 545 150 18 14 517 6 474 2.44e-151 441
Msa1172450 MtrunA17_Chr1g0198171 39.900 401 172 16 25 381 10 385 7.02e-77 250
Msa1172450 MtrunA17_Chr6g0463941 38.567 293 133 5 131 377 46 337 5.29e-41 156
Msa1172450 MtrunA17_Chr6g0463941 47.312 93 47 2 134 225 460 551 4.97e-20 93.6
Msa1172450 MtrunA17_Chr1g0201911 32.542 295 162 4 138 404 55 340 2.40e-35 139
Msa1172450 MtrunA17_Chr1g0201911 40.458 131 71 4 127 256 361 485 3.11e-22 100
Msa1172450 MtrunA17_Chr1g0201941 65.263 95 30 2 132 224 49 142 1.09e-32 132
Msa1172450 MtrunA17_Chr1g0201941 46.000 100 51 3 129 227 446 543 1.95e-20 95.1
Msa1172450 MtrunA17_Chr1g0201941 39.535 86 52 0 292 377 272 357 1.87e-13 73.2
Msa1172450 MtrunA17_Chr1g0190851 29.046 241 145 8 139 373 104 324 1.38e-14 76.3
Msa1172450 MtrunA17_Chr1g0190851 37.607 117 58 4 138 240 418 533 1.90e-12 69.7
Msa1172450 MtrunA17_Chr7g0273941 36.220 127 70 3 111 227 354 479 1.56e-14 75.9
Msa1172450 MtrunA17_Chr2g0290511 38.053 113 65 3 133 241 257 368 3.77e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1172450 AT5G03680.1 57.929 309 100 9 138 422 119 421 4.72e-101 316
Msa1172450 AT3G10000.1 44.170 446 198 13 105 515 49 478 6.60e-100 310
Msa1172450 AT3G10000.2 42.152 446 197 14 105 515 49 468 1.13e-89 283
Msa1172450 AT1G76890.2 33.654 312 135 7 131 377 34 338 1.82e-39 151
Msa1172450 AT1G76890.2 45.098 102 54 2 135 235 394 494 3.31e-19 91.3
Msa1172450 AT1G76880.1 63.918 97 32 2 138 234 61 154 1.67e-31 129
Msa1172450 AT1G76880.1 44.538 119 55 4 119 227 380 497 8.30e-19 90.1
Msa1172450 AT1G33240.3 64.368 87 30 1 138 224 62 147 1.25e-29 123
Msa1172450 AT1G33240.3 43.820 89 48 2 138 225 435 522 1.68e-16 82.8
Msa1172450 AT1G33240.1 64.368 87 30 1 138 224 62 147 1.75e-29 123
Msa1172450 AT1G33240.1 43.820 89 48 2 138 225 435 522 1.73e-16 83.2
Msa1172450 AT1G33240.2 43.820 89 48 2 138 225 396 483 1.92e-16 82.8
Msa1172450 AT1G33240.2 72.340 47 13 0 178 224 62 108 2.74e-15 79.3
Msa1172450 AT5G28300.1 39.604 101 49 4 138 227 459 558 1.24e-12 70.9
Msa1172450 AT5G47660.1 42.857 91 44 4 138 225 303 388 1.81e-11 66.6

Find 168 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTAGCTTCTTTAAATTT+AGG 0.106926 8_1:-2473390 None:intergenic
ACATGTATTTGATGTGTTTA+AGG 0.119061 8_1:+2475796 Msa1172450:three_prime_UTR
GGAAATTTGTGGGAGAATTT+TGG 0.154763 8_1:+2475551 Msa1172450:CDS
ATTATTGTTGTTGACAAAAT+TGG 0.173365 8_1:-2474760 None:intergenic
GGAAAAGTTCACTTGCTTAT+TGG 0.193573 8_1:+2475869 Msa1172450:three_prime_UTR
CTCTCATCAGTTAATGGTTT+TGG 0.213143 8_1:-2475595 None:intergenic
CATAAACTCTCATCAGTTAA+TGG 0.217027 8_1:-2475601 None:intergenic
ATGGAAGCTTTGAAGAATTT+AGG 0.224314 8_1:+2475158 Msa1172450:CDS
AGCAAGGGATGCTGCTTTAA+TGG 0.232544 8_1:+2475139 Msa1172450:CDS
CGTCAACTTGAAGCTTTATA+TGG 0.241815 8_1:+2474705 Msa1172450:CDS
TCCTGAGACCACAGGATATA+TGG 0.242867 8_1:+2473293 Msa1172450:CDS
CATGATCATAAGGGTGTAAA+TGG 0.261143 8_1:+2475212 Msa1172450:CDS
GATTAGCTTCTTTAAATTTA+GGG 0.283381 8_1:-2473389 None:intergenic
GGCATGATGGTAAGCATTAC+AGG 0.285238 8_1:+2474676 Msa1172450:CDS
CATGTATTTGATGTGTTTAA+GGG 0.291153 8_1:+2475797 Msa1172450:three_prime_UTR
TTGTTGACAAAATTGGTTTC+TGG 0.294784 8_1:-2474753 None:intergenic
TATGATCATTGTGAGGGTTT+TGG 0.304071 8_1:-2474809 None:intergenic
AGGAGGTAGAGAAATGATTA+AGG 0.310468 8_1:+2475178 Msa1172450:CDS
GAATTGCATTAAAGATTATA+AGG 0.321400 8_1:+2476400 Msa1172450:three_prime_UTR
GTTCTGATAATTGTACTCTA+AGG 0.329879 8_1:+2475303 Msa1172450:CDS
GCTTCTTTAGTGTGCTGTTT+GGG 0.336131 8_1:+2476031 Msa1172450:three_prime_UTR
AAGGGTGTAAATGGAATAAC+TGG 0.343913 8_1:+2475221 Msa1172450:CDS
GATCCTGTCGTGCAGGAAAA+AGG 0.344541 8_1:-2472782 None:intergenic
TTTGGCTATTACTTGTTTGT+TGG 0.348056 8_1:-2474791 None:intergenic
TACTCTAAGGGATGATTCTA+AGG 0.354428 8_1:+2475316 Msa1172450:CDS
CCTCTTAATTATGACCCATT+TGG 0.358932 8_1:-2476378 None:intergenic
CTGTCGGTATAGATGGGAAA+TGG 0.365777 8_1:-2473032 None:intergenic
CAAATACATGTTTGGAATCA+TGG 0.367407 8_1:-2475784 None:intergenic
AGAGAGAGCTGAGAAGAGTT+AGG 0.371959 8_1:-2472659 None:intergenic
GATCGATCTAAATCCATGTT+TGG 0.373856 8_1:+2475648 Msa1172450:three_prime_UTR
TGCTTCTTTAGTGTGCTGTT+TGG 0.375364 8_1:+2476030 Msa1172450:three_prime_UTR
AAACACATCAAATACATGTT+TGG 0.382363 8_1:-2475792 None:intergenic
TATTACTTGTTTGTTGGAAA+TGG 0.383105 8_1:-2474785 None:intergenic
TGGTTTCTGGTAGAGAAGTT+TGG 0.387708 8_1:-2474740 None:intergenic
GTTTCTGTGTACTGATCATA+TGG 0.392340 8_1:+2476083 Msa1172450:three_prime_UTR
TTTACTTTAATGCATGAAGA+TGG 0.394689 8_1:+2475919 Msa1172450:three_prime_UTR
TTTAAAGAAGCTAATCAAAA+AGG 0.402136 8_1:+2473396 Msa1172450:CDS
GTTGTTGTTATTGCTGTTGA+AGG 0.404416 8_1:-2473237 None:intergenic
AGAGTAGTGGAAGAAGAAGT+TGG 0.406533 8_1:+2474916 Msa1172450:CDS
CCCATATATCCTGTGGTCTC+AGG 0.410413 8_1:-2473294 None:intergenic
TCACCTTCTGATTCTAATGT+TGG 0.411980 8_1:+2475479 Msa1172450:CDS
GTAGCCGCTGTCGGTATAGA+TGG 0.413426 8_1:-2473039 None:intergenic
TTAACAAAGCTGTCAGATTC+CGG 0.414479 8_1:-2473083 None:intergenic
CATCGTTTGATCACTCCAAA+TGG 0.430918 8_1:+2476363 Msa1172450:three_prime_UTR
AGAGTAAGAGTTTCTTGTCT+TGG 0.432446 8_1:-2473342 None:intergenic
TGAAGAAGCTCATGATCATA+AGG 0.433018 8_1:+2475202 Msa1172450:CDS
GTTTGGATTGACAGTGAGTT+CGG 0.444528 8_1:+2475665 Msa1172450:three_prime_UTR
CCAAATGGGTCATAATTAAG+AGG 0.446619 8_1:+2476378 Msa1172450:three_prime_UTR
TTGAGTTAGTAGTGAGACTA+AGG 0.450800 8_1:-2474833 None:intergenic
ATTCAAAATCAAAATGAAGA+TGG 0.456037 8_1:+2475251 Msa1172450:CDS
TTTGGAGTAATGAGAGAGCA+TGG 0.461952 8_1:+2475111 Msa1172450:CDS
AGAATAGAACCAATGTCTAT+AGG 0.461959 8_1:-2476474 None:intergenic
CAGTATGAGATGATGATGTT+AGG 0.464776 8_1:+2473159 Msa1172450:CDS
CATATTGTTGTTGCTGCTGT+TGG 0.466902 8_1:-2472975 None:intergenic
GTTGTTGCTGCTGTTGGTGA+TGG 0.468711 8_1:-2472969 None:intergenic
GTTTAGTGATGGAGATAAAG+TGG 0.469595 8_1:+2475848 Msa1172450:three_prime_UTR
GTTATTATGTTTACATCAGT+TGG 0.471072 8_1:+2475982 Msa1172450:three_prime_UTR
AAGACAAAAGAAGGTAAAGC+AGG 0.472275 8_1:+2474651 Msa1172450:CDS
TTGGAATATGACAAAAGATC+AGG 0.472707 8_1:+2475888 Msa1172450:three_prime_UTR
ATGATTCTAAGGAAGGAAAC+AGG 0.472723 8_1:+2475327 Msa1172450:CDS
GTTATTGCTGTTGAAGGTGG+TGG 0.474694 8_1:-2473231 None:intergenic
ATCTATACCGACAGCGGCTA+CGG 0.482932 8_1:+2473041 Msa1172450:CDS
GGAGGAAACAAGAGGCCAAA+AGG 0.485530 8_1:+2475069 Msa1172450:CDS
TTGAGTCTTCCTATAGACAT+TGG 0.487925 8_1:+2476465 Msa1172450:three_prime_UTR
TTACTTTAATGCATGAAGAT+GGG 0.488805 8_1:+2475920 Msa1172450:three_prime_UTR
AGCTGTCAGATTCCGGTGAC+CGG 0.495878 8_1:-2473076 None:intergenic
AAGGCTCAAGTTTGAAGCTA+AGG 0.497088 8_1:-2472763 None:intergenic
GATACGTCGTCGTCTGATGA+TGG 0.498562 8_1:+2474870 Msa1172450:CDS
CTTTCCTTTCATGATTAGTG+AGG 0.500450 8_1:+2475526 Msa1172450:CDS
GATCTAAGACAGCTAGTGAA+TGG 0.501254 8_1:+2472997 Msa1172450:CDS
GACACTTGAGGACAAGGAAA+AGG 0.501629 8_1:+2475022 Msa1172450:CDS
CATGTATATATGAGAGGCTA+GGG 0.504957 8_1:-2472897 None:intergenic
GGAAGGAAACAGGAAGAGAA+AGG 0.505443 8_1:+2475337 Msa1172450:CDS
GGGCGTTAAGAGAAGAAGAG+TGG 0.505945 8_1:+2475048 Msa1172450:CDS
TCATGTATATATGAGAGGCT+AGG 0.508330 8_1:-2472898 None:intergenic
TTCAAAATCAAAATGAAGAT+GGG 0.510698 8_1:+2475252 Msa1172450:CDS
GAAGAAAGCAGCGGCAGAGT+CGG 0.518458 8_1:-2472804 None:intergenic
GGTGATGACCATGATTGTTA+TGG 0.519317 8_1:-2472936 None:intergenic
CAATGTTCTATGTACAATCA+AGG 0.520932 8_1:+2475386 Msa1172450:CDS
GCTGCTGTTGGTGATGGTGA+TGG 0.523244 8_1:-2472963 None:intergenic
CTAAGGGATGATTCTAAGGA+AGG 0.524712 8_1:+2475320 Msa1172450:CDS
CTAGAGACTTCATCCCATAA+AGG 0.525783 8_1:-2473420 None:intergenic
ATTGCTGTTGAAGGTGGTGG+TGG 0.527775 8_1:-2473228 None:intergenic
TGAAGAAGAAGTAATAAGTG+AGG 0.528667 8_1:-2472835 None:intergenic
TAGTGAGGGTGGAAATTTGT+GGG 0.530887 8_1:+2475541 Msa1172450:CDS
TGTCGGTATAGATGGGAAAT+GGG 0.531485 8_1:-2473031 None:intergenic
CCTGAGACCACAGGATATAT+GGG 0.531681 8_1:+2473294 Msa1172450:CDS
GTTGGTGATGGTGATGGTGA+GGG 0.532276 8_1:-2472957 None:intergenic
AATCTGTTCAAGTTTAGTGA+TGG 0.532748 8_1:+2475837 Msa1172450:three_prime_UTR
AACTCATCCGTAGCCGCTGT+CGG 0.532933 8_1:-2473048 None:intergenic
ATCGTTTGATCACTCCAAAT+GGG 0.534407 8_1:+2476364 Msa1172450:three_prime_UTR
TTTCCTTTCATGATTAGTGA+GGG 0.536493 8_1:+2475527 Msa1172450:CDS
AAACTACAAAGGAATGATCA+TGG 0.537652 8_1:+2475452 Msa1172450:CDS
TATTACAAGAAGACAAAAGA+AGG 0.546022 8_1:+2474642 Msa1172450:CDS
GTTGTTATTGCTGTTGAAGG+TGG 0.546595 8_1:-2473234 None:intergenic
AAGGGAAAGAAGAAGAGTAG+TGG 0.550255 8_1:+2474903 Msa1172450:CDS
AAACATGGATTTAGATCGAT+CGG 0.551290 8_1:-2475646 None:intergenic
CTTTATGGGATGAAGTCTCT+AGG 0.552690 8_1:+2473421 Msa1172450:CDS
GATGACCACCATAACAATCA+TGG 0.553172 8_1:+2472928 Msa1172450:CDS
TTGTCTTGGCCATCTTCCAG+TGG 0.560726 8_1:-2473328 None:intergenic
AATGTTGGAAATGTAGCTAA+TGG 0.561430 8_1:+2475494 Msa1172450:CDS
TTCTGATAATTGTACTCTAA+GGG 0.561784 8_1:+2475304 Msa1172450:CDS
GAGATGCTTCCACTGGAAGA+TGG 0.562372 8_1:+2473319 Msa1172450:CDS
ATGGGTGGAGATGCTTCCAC+TGG 0.563031 8_1:+2473312 Msa1172450:CDS
GAGGAAACAAGAGGCCAAAA+GGG 0.564460 8_1:+2475070 Msa1172450:CDS
GAAGAAGAAGTAATAAGTGA+GGG 0.565315 8_1:-2472834 None:intergenic
GAAGCTTTGAAGAATTTAGG+AGG 0.565385 8_1:+2475161 Msa1172450:CDS
GGTAAAGCAGGAAGGCATGA+TGG 0.566904 8_1:+2474663 Msa1172450:CDS
GATGTAAACATAATAACTGA+AGG 0.570199 8_1:-2475976 None:intergenic
CTAAAGAAGCATGAGGGGAA+AGG 0.570963 8_1:-2476018 None:intergenic
TAGTGGAAGAAGAAGTTGGA+AGG 0.571374 8_1:+2474920 Msa1172450:CDS
CCACCCTCACTAATCATGAA+AGG 0.571997 8_1:-2475530 None:intergenic
CCTTTCATGATTAGTGAGGG+TGG 0.572090 8_1:+2475530 Msa1172450:CDS
AGAGTCGGATCCTGTCGTGC+AGG 0.572753 8_1:-2472789 None:intergenic
CTGAAGAACATGGATATCAA+AGG 0.576035 8_1:+2474577 Msa1172450:CDS
TCTATGTACAATCAAGGAAG+TGG 0.576269 8_1:+2475392 Msa1172450:CDS
GAGAGCATGGATTGAAGCAA+GGG 0.577276 8_1:+2475124 Msa1172450:CDS
CAACGTGATTTCGTCAAACT+CGG 0.577947 8_1:-2476164 None:intergenic
TGAAGCTAAGGACAATGGTA+TGG 0.582074 8_1:-2472751 None:intergenic
GAAGAAGCTCATGATCATAA+GGG 0.582156 8_1:+2475203 Msa1172450:CDS
TTTCCAACATTAGAATCAGA+AGG 0.583715 8_1:-2475482 None:intergenic
AGAGAGCATGGATTGAAGCA+AGG 0.583741 8_1:+2475123 Msa1172450:CDS
CACTTGTGTACACACAGACA+TGG 0.589280 8_1:+2472726 Msa1172450:five_prime_UTR
TGTGAAGACACTTGAGGACA+AGG 0.590043 8_1:+2475016 Msa1172450:CDS
GAGATGATGATGTTAGGTCG+TGG 0.590941 8_1:+2473165 Msa1172450:CDS
TAGCCGCTGTCGGTATAGAT+GGG 0.591582 8_1:-2473038 None:intergenic
GAACATGGATATCAAAGGAG+TGG 0.592797 8_1:+2474582 Msa1172450:CDS
GAAACAAGAGGCCAAAAGGG+TGG 0.597918 8_1:+2475073 Msa1172450:CDS
TAAGGCTATGATCATTGTGA+GGG 0.598377 8_1:-2474815 None:intergenic
TGTTGGTGATGGTGATGGTG+AGG 0.604876 8_1:-2472958 None:intergenic
CAAAAGAAGGTAAAGCAGGA+AGG 0.606280 8_1:+2474655 Msa1172450:CDS
AGGATAATGTCTGAAGAACA+TGG 0.616822 8_1:+2474567 Msa1172450:intron
CTAAGGCTATGATCATTGTG+AGG 0.617388 8_1:-2474816 None:intergenic
AACACTAGCACTAGCAGTGG+TGG 0.618195 8_1:-2473265 None:intergenic
TGATGTTAATGATCAAAGAG+AGG 0.618449 8_1:+2475421 Msa1172450:CDS
TGATGATGGCAATGATGTGA+AGG 0.618528 8_1:+2474884 Msa1172450:CDS
GATGACCATGATTGTTATGG+TGG 0.618743 8_1:-2472933 None:intergenic
CGTTAAGAGAAGAAGAGTGG+AGG 0.619013 8_1:+2475051 Msa1172450:CDS
GTTTCAACTCCTGAGACCAC+AGG 0.619321 8_1:+2473285 Msa1172450:CDS
TAAACATGTACTGTGCATGC+AGG 0.622094 8_1:+2476054 Msa1172450:three_prime_UTR
ATGTAAACATAATAACTGAA+GGG 0.622934 8_1:-2475975 None:intergenic
AGCACACTAAAGAAGCATGA+GGG 0.623517 8_1:-2476024 None:intergenic
GACAGCTAGTGAATGGAACA+AGG 0.626911 8_1:+2473004 Msa1172450:CDS
ATCTTGAATAGTACTGTGAG+AGG 0.628009 8_1:+2475281 Msa1172450:CDS
ATGTCTATAGGAAGACTCAA+AGG 0.628388 8_1:-2476462 None:intergenic
ATCTCCACCCATATATCCTG+TGG 0.628636 8_1:-2473301 None:intergenic
AGAAGAGTGGAGGAAACAAG+AGG 0.631900 8_1:+2475061 Msa1172450:CDS
TGAGGACAAGGAAAAGGAGA+GGG 0.634562 8_1:+2475028 Msa1172450:CDS
AGGAGATTGTGAAACTACAA+AGG 0.636318 8_1:+2475441 Msa1172450:CDS
TTGTCAAAACTACGATGGCG+TGG 0.637473 8_1:+2476226 Msa1172450:three_prime_UTR
GAAGCTTGTGGAGAAGCAAG+AGG 0.641062 8_1:+2474977 Msa1172450:CDS
CAACATTAATAAATATAGTG+TGG 0.642065 8_1:-2476439 None:intergenic
CAGCACACTAAAGAAGCATG+AGG 0.646704 8_1:-2476025 None:intergenic
ATACACATGCTAATAAACAA+AGG 0.648070 8_1:-2476126 None:intergenic
TGCACAAATGAAGAAGCTTG+TGG 0.649032 8_1:+2474965 Msa1172450:CDS
AAGTTTGAAGCTAAGGACAA+TGG 0.655035 8_1:-2472756 None:intergenic
TTGTGGAGAAGCAAGAGGAG+TGG 0.656273 8_1:+2474982 Msa1172450:CDS
ACTCACTGTCAATCCAAACA+TGG 0.659105 8_1:-2475661 None:intergenic
ACTTGTGTACACACAGACAT+GGG 0.659567 8_1:+2472727 Msa1172450:five_prime_UTR
GGAGAGAGTGAAGAAAGCAG+CGG 0.666908 8_1:-2472813 None:intergenic
GCACACTAAAGAAGCATGAG+GGG 0.667380 8_1:-2476023 None:intergenic
TGAAACACTAGCACTAGCAG+TGG 0.671025 8_1:-2473268 None:intergenic
TTGAGGACAAGGAAAAGGAG+AGG 0.672502 8_1:+2475027 Msa1172450:CDS
GATGATGGCAATGATGTGAA+GGG 0.683964 8_1:+2474885 Msa1172450:CDS
TTAGTGAGGGTGGAAATTTG+TGG 0.685166 8_1:+2475540 Msa1172450:CDS
GAGACCACAGGATATATGGG+TGG 0.690993 8_1:+2473297 Msa1172450:CDS
TAAGCTTGTGAAGACACTTG+AGG 0.695179 8_1:+2475010 Msa1172450:CDS
TTTCCCATCTATACCGACAG+CGG 0.709498 8_1:+2473035 Msa1172450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAGATGAAATTTAATAAA+GGG - chr8_1:2474024-2474043 None:intergenic 10.0%
!! GTAAAGATGAAATTTAATAA+AGG - chr8_1:2474025-2474044 None:intergenic 15.0%
!! ATATAAATTACATCTACATA+AGG - chr8_1:2474503-2474522 None:intergenic 15.0%
!! ATGAGATTGAAAAAAAAGAA+TGG - chr8_1:2472862-2472881 None:intergenic 20.0%
!!! TTTTTTCATGTATATATGAG+AGG - chr8_1:2472906-2472925 None:intergenic 20.0%
!! CTCATATATACATGAAAAAA+TGG + chr8_1:2472906-2472925 Msa1172450:exon 20.0%
!!! GATTAGCTTCTTTAAATTTA+GGG - chr8_1:2473392-2473411 None:intergenic 20.0%
!!! TGATTAGCTTCTTTAAATTT+AGG - chr8_1:2473393-2473412 None:intergenic 20.0%
!! TTTAAAGAAGCTAATCAAAA+AGG + chr8_1:2473396-2473415 Msa1172450:CDS 20.0%
!!! ATATTTGTTTGATACCATTT+TGG + chr8_1:2474542-2474561 Msa1172450:intron 20.0%
!!! ATTATTGTTGTTGACAAAAT+TGG - chr8_1:2474763-2474782 None:intergenic 20.0%
!! ATTCAAAATCAAAATGAAGA+TGG + chr8_1:2475251-2475270 Msa1172450:CDS 20.0%
!! TTCAAAATCAAAATGAAGAT+GGG + chr8_1:2475252-2475271 Msa1172450:CDS 20.0%
!!! TTAAAGCTTTTACAAAATCA+CGG + chr8_1:2475734-2475753 Msa1172450:three_prime_UTR 20.0%
!! ATGTAAACATAATAACTGAA+GGG - chr8_1:2475978-2475997 None:intergenic 20.0%
!! GAATTGCATTAAAGATTATA+AGG + chr8_1:2476400-2476419 Msa1172450:three_prime_UTR 20.0%
!! CAACATTAATAAATATAGTG+TGG - chr8_1:2476442-2476461 None:intergenic 20.0%
! TAATCAAAAAGGTCCTTTAT+GGG + chr8_1:2473407-2473426 Msa1172450:CDS 25.0%
!!! TTGGAGTTAATTTGTTTGAT+GGG + chr8_1:2473731-2473750 Msa1172450:intron 25.0%
! GTTAAGCTTAAAATGAGTAT+AGG + chr8_1:2473817-2473836 Msa1172450:intron 25.0%
!! AAATTTTGCACTTAAAAGAG+GGG - chr8_1:2473997-2474016 None:intergenic 25.0%
!! CAAATTTTGCACTTAAAAGA+GGG - chr8_1:2473998-2474017 None:intergenic 25.0%
!! ACAAATTTTGCACTTAAAAG+AGG - chr8_1:2473999-2474018 None:intergenic 25.0%
!!! TAGTTATGTTTGCTATAACT+AGG + chr8_1:2474230-2474249 Msa1172450:intron 25.0%
! AATCAATAATGACATCATTG+TGG - chr8_1:2474417-2474436 None:intergenic 25.0%
! TATTACAAGAAGACAAAAGA+AGG + chr8_1:2474642-2474661 Msa1172450:CDS 25.0%
!! TATTACTTGTTTGTTGGAAA+TGG - chr8_1:2474788-2474807 None:intergenic 25.0%
!! TGGAAAAAGAACAAAAGTTT+TGG + chr8_1:2475093-2475112 Msa1172450:CDS 25.0%
! TTCTGATAATTGTACTCTAA+GGG + chr8_1:2475304-2475323 Msa1172450:CDS 25.0%
!! CACAGTTTTTAACAAAATCA+GGG - chr8_1:2475709-2475728 None:intergenic 25.0%
!! TCACAGTTTTTAACAAAATC+AGG - chr8_1:2475710-2475729 None:intergenic 25.0%
! AAACACATCAAATACATGTT+TGG - chr8_1:2475795-2475814 None:intergenic 25.0%
! ACATGTATTTGATGTGTTTA+AGG + chr8_1:2475796-2475815 Msa1172450:three_prime_UTR 25.0%
! CATGTATTTGATGTGTTTAA+GGG + chr8_1:2475797-2475816 Msa1172450:three_prime_UTR 25.0%
! TTTACTTTAATGCATGAAGA+TGG + chr8_1:2475919-2475938 Msa1172450:three_prime_UTR 25.0%
! TTACTTTAATGCATGAAGAT+GGG + chr8_1:2475920-2475939 Msa1172450:three_prime_UTR 25.0%
! GATGTAAACATAATAACTGA+AGG - chr8_1:2475979-2475998 None:intergenic 25.0%
! GTTATTATGTTTACATCAGT+TGG + chr8_1:2475982-2476001 Msa1172450:three_prime_UTR 25.0%
! ATACACATGCTAATAAACAA+AGG - chr8_1:2476129-2476148 None:intergenic 25.0%
!! AATTTTTGTCAAAACTACGA+TGG + chr8_1:2476221-2476240 Msa1172450:three_prime_UTR 25.0%
GAAGAAGAAGTAATAAGTGA+GGG - chr8_1:2472837-2472856 None:intergenic 30.0%
TGAAGAAGAAGTAATAAGTG+AGG - chr8_1:2472838-2472857 None:intergenic 30.0%
CTAATCAAAAAGGTCCTTTA+TGG + chr8_1:2473406-2473425 Msa1172450:CDS 30.0%
!! CTTGGAGTTAATTTGTTTGA+TGG + chr8_1:2473730-2473749 Msa1172450:intron 30.0%
!! TGGAGTTAATTTGTTTGATG+GGG + chr8_1:2473732-2473751 Msa1172450:intron 30.0%
!! TAATTTGTTTGATGGGGATT+CGG + chr8_1:2473738-2473757 Msa1172450:intron 30.0%
TAGCAAACATAACTAAGCAT+AGG - chr8_1:2474225-2474244 None:intergenic 30.0%
TCACATGATTAGACTTCTTT+AGG + chr8_1:2474324-2474343 Msa1172450:intron 30.0%
!!! TGTTTGATACCATTTTGGTT+AGG + chr8_1:2474547-2474566 Msa1172450:intron 30.0%
AGACATTATCCTAACCAAAA+TGG - chr8_1:2474559-2474578 None:intergenic 30.0%
! TTGTTGACAAAATTGGTTTC+TGG - chr8_1:2474756-2474775 None:intergenic 30.0%
TTTGGCTATTACTTGTTTGT+TGG - chr8_1:2474794-2474813 None:intergenic 30.0%
!! ATGGAAGCTTTGAAGAATTT+AGG + chr8_1:2475158-2475177 Msa1172450:CDS 30.0%
GTTCTGATAATTGTACTCTA+AGG + chr8_1:2475303-2475322 Msa1172450:CDS 30.0%
CAATGTTCTATGTACAATCA+AGG + chr8_1:2475386-2475405 Msa1172450:CDS 30.0%
TGATGTTAATGATCAAAGAG+AGG + chr8_1:2475421-2475440 Msa1172450:CDS 30.0%
AAACTACAAAGGAATGATCA+TGG + chr8_1:2475452-2475471 Msa1172450:CDS 30.0%
TTTCCAACATTAGAATCAGA+AGG - chr8_1:2475485-2475504 None:intergenic 30.0%
AATGTTGGAAATGTAGCTAA+TGG + chr8_1:2475494-2475513 Msa1172450:CDS 30.0%
TTTCCTTTCATGATTAGTGA+GGG + chr8_1:2475527-2475546 Msa1172450:CDS 30.0%
CATAAACTCTCATCAGTTAA+TGG - chr8_1:2475604-2475623 None:intergenic 30.0%
AAACATGGATTTAGATCGAT+CGG - chr8_1:2475649-2475668 None:intergenic 30.0%
! AGTTTTTAACAAAATCAGGG+TGG - chr8_1:2475706-2475725 None:intergenic 30.0%
! CAAATACATGTTTGGAATCA+TGG - chr8_1:2475787-2475806 None:intergenic 30.0%
! AATCTGTTCAAGTTTAGTGA+TGG + chr8_1:2475837-2475856 Msa1172450:three_prime_UTR 30.0%
TTGGAATATGACAAAAGATC+AGG + chr8_1:2475888-2475907 Msa1172450:three_prime_UTR 30.0%
AGAATAGAACCAATGTCTAT+AGG - chr8_1:2476477-2476496 None:intergenic 30.0%
! AAGTTTGAAGCTAAGGACAA+TGG - chr8_1:2472759-2472778 None:intergenic 35.0%
CATGTATATATGAGAGGCTA+GGG - chr8_1:2472900-2472919 None:intergenic 35.0%
TCATGTATATATGAGAGGCT+AGG - chr8_1:2472901-2472920 None:intergenic 35.0%
TTAACAAAGCTGTCAGATTC+CGG - chr8_1:2473086-2473105 None:intergenic 35.0%
! TTTTGATGTGTCTGTGGATT+AGG - chr8_1:2473123-2473142 None:intergenic 35.0%
! CATACTGTTGTTGTTGTTGT+TGG - chr8_1:2473146-2473165 None:intergenic 35.0%
! CAGTATGAGATGATGATGTT+AGG + chr8_1:2473159-2473178 Msa1172450:CDS 35.0%
! GTTGTTGTTATTGCTGTTGA+AGG - chr8_1:2473240-2473259 None:intergenic 35.0%
AGAGTAAGAGTTTCTTGTCT+TGG - chr8_1:2473345-2473364 None:intergenic 35.0%
TGAGTATGAAGAAGCTATGT+GGG - chr8_1:2473508-2473527 None:intergenic 35.0%
TTGAGTATGAAGAAGCTATG+TGG - chr8_1:2473509-2473528 None:intergenic 35.0%
! AATTTGTTTGATGGGGATTC+GGG + chr8_1:2473739-2473758 Msa1172450:intron 35.0%
TGGTGGAATCTTACTAAACT+TGG - chr8_1:2473943-2473962 None:intergenic 35.0%
TTGTAAGCAAATGCAGACAT+TGG - chr8_1:2474116-2474135 None:intergenic 35.0%
TATGAAATGACATCAAGCTG+AGG + chr8_1:2474141-2474160 Msa1172450:intron 35.0%
! TATAGCTAGAAGTGTGTGAA+GGG - chr8_1:2474361-2474380 None:intergenic 35.0%
AGGATAATGTCTGAAGAACA+TGG + chr8_1:2474567-2474586 Msa1172450:intron 35.0%
CTGAAGAACATGGATATCAA+AGG + chr8_1:2474577-2474596 Msa1172450:CDS 35.0%
AAGACAAAAGAAGGTAAAGC+AGG + chr8_1:2474651-2474670 Msa1172450:CDS 35.0%
! CGTCAACTTGAAGCTTTATA+TGG + chr8_1:2474705-2474724 Msa1172450:CDS 35.0%
! TATGATCATTGTGAGGGTTT+TGG - chr8_1:2474812-2474831 None:intergenic 35.0%
TAAGGCTATGATCATTGTGA+GGG - chr8_1:2474818-2474837 None:intergenic 35.0%
TTGAGTTAGTAGTGAGACTA+AGG - chr8_1:2474836-2474855 None:intergenic 35.0%
! TTGTTCTTTTTCCACCCTTT+TGG - chr8_1:2475087-2475106 None:intergenic 35.0%
!! GAAGCTTTGAAGAATTTAGG+AGG + chr8_1:2475161-2475180 Msa1172450:CDS 35.0%
AGGAGGTAGAGAAATGATTA+AGG + chr8_1:2475178-2475197 Msa1172450:CDS 35.0%
TGAAGAAGCTCATGATCATA+AGG + chr8_1:2475202-2475221 Msa1172450:CDS 35.0%
GAAGAAGCTCATGATCATAA+GGG + chr8_1:2475203-2475222 Msa1172450:CDS 35.0%
! CATGATCATAAGGGTGTAAA+TGG + chr8_1:2475212-2475231 Msa1172450:CDS 35.0%
! AAGGGTGTAAATGGAATAAC+TGG + chr8_1:2475221-2475240 Msa1172450:CDS 35.0%
ATCTTGAATAGTACTGTGAG+AGG + chr8_1:2475281-2475300 Msa1172450:CDS 35.0%
! TACTCTAAGGGATGATTCTA+AGG + chr8_1:2475316-2475335 Msa1172450:CDS 35.0%
! ATGATTCTAAGGAAGGAAAC+AGG + chr8_1:2475327-2475346 Msa1172450:CDS 35.0%
TCTATGTACAATCAAGGAAG+TGG + chr8_1:2475392-2475411 Msa1172450:CDS 35.0%
AGGAGATTGTGAAACTACAA+AGG + chr8_1:2475441-2475460 Msa1172450:CDS 35.0%
TCACCTTCTGATTCTAATGT+TGG + chr8_1:2475479-2475498 Msa1172450:CDS 35.0%
CTTTCCTTTCATGATTAGTG+AGG + chr8_1:2475526-2475545 Msa1172450:CDS 35.0%
! GGAAATTTGTGGGAGAATTT+TGG + chr8_1:2475551-2475570 Msa1172450:CDS 35.0%
! CTCTCATCAGTTAATGGTTT+TGG - chr8_1:2475598-2475617 None:intergenic 35.0%
GATCGATCTAAATCCATGTT+TGG + chr8_1:2475648-2475667 Msa1172450:three_prime_UTR 35.0%
! GTTTAGTGATGGAGATAAAG+TGG + chr8_1:2475848-2475867 Msa1172450:three_prime_UTR 35.0%
GGAAAAGTTCACTTGCTTAT+TGG + chr8_1:2475869-2475888 Msa1172450:three_prime_UTR 35.0%
! GTTTCTGTGTACTGATCATA+TGG + chr8_1:2476083-2476102 Msa1172450:three_prime_UTR 35.0%
ATCGTTTGATCACTCCAAAT+GGG + chr8_1:2476364-2476383 Msa1172450:three_prime_UTR 35.0%
CCTCTTAATTATGACCCATT+TGG - chr8_1:2476381-2476400 None:intergenic 35.0%
CCAAATGGGTCATAATTAAG+AGG + chr8_1:2476378-2476397 Msa1172450:three_prime_UTR 35.0%
ATGTCTATAGGAAGACTCAA+AGG - chr8_1:2476465-2476484 None:intergenic 35.0%
TTGAGTCTTCCTATAGACAT+TGG + chr8_1:2476465-2476484 Msa1172450:three_prime_UTR 35.0%
ACTTGTGTACACACAGACAT+GGG + chr8_1:2472727-2472746 Msa1172450:five_prime_UTR 40.0%
TGAAGCTAAGGACAATGGTA+TGG - chr8_1:2472754-2472773 None:intergenic 40.0%
! AAGGCTCAAGTTTGAAGCTA+AGG - chr8_1:2472766-2472785 None:intergenic 40.0%
GATGACCACCATAACAATCA+TGG + chr8_1:2472928-2472947 Msa1172450:CDS 40.0%
GATGACCATGATTGTTATGG+TGG - chr8_1:2472936-2472955 None:intergenic 40.0%
GGTGATGACCATGATTGTTA+TGG - chr8_1:2472939-2472958 None:intergenic 40.0%
! CATATTGTTGTTGCTGCTGT+TGG - chr8_1:2472978-2472997 None:intergenic 40.0%
! GATCTAAGACAGCTAGTGAA+TGG + chr8_1:2472997-2473016 Msa1172450:CDS 40.0%
TGTCGGTATAGATGGGAAAT+GGG - chr8_1:2473034-2473053 None:intergenic 40.0%
!!! TGTTGGTTTTGATGTGTCTG+TGG - chr8_1:2473129-2473148 None:intergenic 40.0%
! GTTGTTATTGCTGTTGAAGG+TGG - chr8_1:2473237-2473256 None:intergenic 40.0%
CTAGAGACTTCATCCCATAA+AGG - chr8_1:2473423-2473442 None:intergenic 40.0%
CTTTATGGGATGAAGTCTCT+AGG + chr8_1:2473421-2473440 Msa1172450:CDS 40.0%
TGAAATGACATGACTGCACT+TGG + chr8_1:2473712-2473731 Msa1172450:intron 40.0%
AAAGTGGAAAAACGAGACAG+TGG - chr8_1:2473963-2473982 None:intergenic 40.0%
! AGGGGTACAAAGTTTCAAAG+TGG - chr8_1:2473979-2473998 None:intergenic 40.0%
AGCAAATGCAGACATTGGAA+TGG - chr8_1:2474111-2474130 None:intergenic 40.0%
ACAACAAAAACGTCAGTGCA+TGG + chr8_1:2474261-2474280 Msa1172450:intron 40.0%
! CTATAGCTAGAAGTGTGTGA+AGG - chr8_1:2474362-2474381 None:intergenic 40.0%
! ACACACTTCTAGCTATAGCT+AGG + chr8_1:2474364-2474383 Msa1172450:intron 40.0%
! CACACTTCTAGCTATAGCTA+GGG + chr8_1:2474365-2474384 Msa1172450:intron 40.0%
GAACATGGATATCAAAGGAG+TGG + chr8_1:2474582-2474601 Msa1172450:CDS 40.0%
CAAAAGAAGGTAAAGCAGGA+AGG + chr8_1:2474655-2474674 Msa1172450:CDS 40.0%
!! TGGTTTCTGGTAGAGAAGTT+TGG - chr8_1:2474743-2474762 None:intergenic 40.0%
CTAAGGCTATGATCATTGTG+AGG - chr8_1:2474819-2474838 None:intergenic 40.0%
!! TGATGATGGCAATGATGTGA+AGG + chr8_1:2474884-2474903 Msa1172450:CDS 40.0%
! GATGATGGCAATGATGTGAA+GGG + chr8_1:2474885-2474904 Msa1172450:CDS 40.0%
AAGGGAAAGAAGAAGAGTAG+TGG + chr8_1:2474903-2474922 Msa1172450:CDS 40.0%
! AGAGTAGTGGAAGAAGAAGT+TGG + chr8_1:2474916-2474935 Msa1172450:CDS 40.0%
TAGTGGAAGAAGAAGTTGGA+AGG + chr8_1:2474920-2474939 Msa1172450:CDS 40.0%
TGCACAAATGAAGAAGCTTG+TGG + chr8_1:2474965-2474984 Msa1172450:CDS 40.0%
TAAGCTTGTGAAGACACTTG+AGG + chr8_1:2475010-2475029 Msa1172450:CDS 40.0%
! TTTGGAGTAATGAGAGAGCA+TGG + chr8_1:2475111-2475130 Msa1172450:CDS 40.0%
! CTAAGGGATGATTCTAAGGA+AGG + chr8_1:2475320-2475339 Msa1172450:CDS 40.0%
TTAGTGAGGGTGGAAATTTG+TGG + chr8_1:2475540-2475559 Msa1172450:CDS 40.0%
TAGTGAGGGTGGAAATTTGT+GGG + chr8_1:2475541-2475560 Msa1172450:CDS 40.0%
ACTCACTGTCAATCCAAACA+TGG - chr8_1:2475664-2475683 None:intergenic 40.0%
GTTTGGATTGACAGTGAGTT+CGG + chr8_1:2475665-2475684 Msa1172450:three_prime_UTR 40.0%
! AGCACACTAAAGAAGCATGA+GGG - chr8_1:2476027-2476046 None:intergenic 40.0%
! TGCTTCTTTAGTGTGCTGTT+TGG + chr8_1:2476030-2476049 Msa1172450:three_prime_UTR 40.0%
!! GCTTCTTTAGTGTGCTGTTT+GGG + chr8_1:2476031-2476050 Msa1172450:three_prime_UTR 40.0%
TAAACATGTACTGTGCATGC+AGG + chr8_1:2476054-2476073 Msa1172450:three_prime_UTR 40.0%
CAACGTGATTTCGTCAAACT+CGG - chr8_1:2476167-2476186 None:intergenic 40.0%
CATCGTTTGATCACTCCAAA+TGG + chr8_1:2476363-2476382 Msa1172450:three_prime_UTR 40.0%
CACTTGTGTACACACAGACA+TGG + chr8_1:2472726-2472745 Msa1172450:five_prime_UTR 45.0%
GACAGCTAGTGAATGGAACA+AGG + chr8_1:2473004-2473023 Msa1172450:CDS 45.0%
CTGTCGGTATAGATGGGAAA+TGG - chr8_1:2473035-2473054 None:intergenic 45.0%
TTTCCCATCTATACCGACAG+CGG + chr8_1:2473035-2473054 Msa1172450:CDS 45.0%
! GCTACGGATGAGTTTTTCTC+CGG + chr8_1:2473057-2473076 Msa1172450:CDS 45.0%
! ATGAGTTTTTCTCCGGTCAC+CGG + chr8_1:2473064-2473083 Msa1172450:CDS 45.0%
! GAGATGATGATGTTAGGTCG+TGG + chr8_1:2473165-2473184 Msa1172450:CDS 45.0%
! GTTATTGCTGTTGAAGGTGG+TGG - chr8_1:2473234-2473253 None:intergenic 45.0%
TGAAACACTAGCACTAGCAG+TGG - chr8_1:2473271-2473290 None:intergenic 45.0%
TCCTGAGACCACAGGATATA+TGG + chr8_1:2473293-2473312 Msa1172450:CDS 45.0%
CCTGAGACCACAGGATATAT+GGG + chr8_1:2473294-2473313 Msa1172450:CDS 45.0%
ATCTCCACCCATATATCCTG+TGG - chr8_1:2473304-2473323 None:intergenic 45.0%
GGCATGATGGTAAGCATTAC+AGG + chr8_1:2474676-2474695 Msa1172450:CDS 45.0%
TGTGAAGACACTTGAGGACA+AGG + chr8_1:2475016-2475035 Msa1172450:CDS 45.0%
GACACTTGAGGACAAGGAAA+AGG + chr8_1:2475022-2475041 Msa1172450:CDS 45.0%
TTGAGGACAAGGAAAAGGAG+AGG + chr8_1:2475027-2475046 Msa1172450:CDS 45.0%
TGAGGACAAGGAAAAGGAGA+GGG + chr8_1:2475028-2475047 Msa1172450:CDS 45.0%
CGTTAAGAGAAGAAGAGTGG+AGG + chr8_1:2475051-2475070 Msa1172450:CDS 45.0%
AGAAGAGTGGAGGAAACAAG+AGG + chr8_1:2475061-2475080 Msa1172450:CDS 45.0%
GAGGAAACAAGAGGCCAAAA+GGG + chr8_1:2475070-2475089 Msa1172450:CDS 45.0%
! AGAGAGCATGGATTGAAGCA+AGG + chr8_1:2475123-2475142 Msa1172450:CDS 45.0%
! GAGAGCATGGATTGAAGCAA+GGG + chr8_1:2475124-2475143 Msa1172450:CDS 45.0%
!! AGCAAGGGATGCTGCTTTAA+TGG + chr8_1:2475139-2475158 Msa1172450:CDS 45.0%
GGAAGGAAACAGGAAGAGAA+AGG + chr8_1:2475337-2475356 Msa1172450:CDS 45.0%
CCACCCTCACTAATCATGAA+AGG - chr8_1:2475533-2475552 None:intergenic 45.0%
CCTTTCATGATTAGTGAGGG+TGG + chr8_1:2475530-2475549 Msa1172450:CDS 45.0%
! CTAAAGAAGCATGAGGGGAA+AGG - chr8_1:2476021-2476040 None:intergenic 45.0%
! GCACACTAAAGAAGCATGAG+GGG - chr8_1:2476026-2476045 None:intergenic 45.0%
! CAGCACACTAAAGAAGCATG+AGG - chr8_1:2476028-2476047 None:intergenic 45.0%
! GTACTGTGCATGCAGGTTTT+TGG + chr8_1:2476061-2476080 Msa1172450:three_prime_UTR 45.0%
TTGTCAAAACTACGATGGCG+TGG + chr8_1:2476226-2476245 Msa1172450:three_prime_UTR 45.0%
!! AAATAATTACATAAATAATT+AGG - chr8_1:2473482-2473501 None:intergenic 5.0%
GATCCTGTCGTGCAGGAAAA+AGG - chr8_1:2472785-2472804 None:intergenic 50.0%
GGAGAGAGTGAAGAAAGCAG+CGG - chr8_1:2472816-2472835 None:intergenic 50.0%
!! GTTGGTGATGGTGATGGTGA+GGG - chr8_1:2472960-2472979 None:intergenic 50.0%
!! TGTTGGTGATGGTGATGGTG+AGG - chr8_1:2472961-2472980 None:intergenic 50.0%
! GTTGTTGCTGCTGTTGGTGA+TGG - chr8_1:2472972-2472991 None:intergenic 50.0%
TAGCCGCTGTCGGTATAGAT+GGG - chr8_1:2473041-2473060 None:intergenic 50.0%
ATCTATACCGACAGCGGCTA+CGG + chr8_1:2473041-2473060 Msa1172450:CDS 50.0%
! ATTGCTGTTGAAGGTGGTGG+TGG - chr8_1:2473231-2473250 None:intergenic 50.0%
AACACTAGCACTAGCAGTGG+TGG - chr8_1:2473268-2473287 None:intergenic 50.0%
GTTTCAACTCCTGAGACCAC+AGG + chr8_1:2473285-2473304 Msa1172450:CDS 50.0%
CCCATATATCCTGTGGTCTC+AGG - chr8_1:2473297-2473316 None:intergenic 50.0%
GAGACCACAGGATATATGGG+TGG + chr8_1:2473297-2473316 Msa1172450:CDS 50.0%
GAGATGCTTCCACTGGAAGA+TGG + chr8_1:2473319-2473338 Msa1172450:CDS 50.0%
TTGTCTTGGCCATCTTCCAG+TGG - chr8_1:2473331-2473350 None:intergenic 50.0%
GTGGAAAAACGAGACAGTGG+TGG - chr8_1:2473960-2473979 None:intergenic 50.0%
! GGTAAAGCAGGAAGGCATGA+TGG + chr8_1:2474663-2474682 Msa1172450:CDS 50.0%
GATACGTCGTCGTCTGATGA+TGG + chr8_1:2474870-2474889 Msa1172450:CDS 50.0%
GAAGCTTGTGGAGAAGCAAG+AGG + chr8_1:2474977-2474996 Msa1172450:CDS 50.0%
TTGTGGAGAAGCAAGAGGAG+TGG + chr8_1:2474982-2475001 Msa1172450:CDS 50.0%
GGGCGTTAAGAGAAGAAGAG+TGG + chr8_1:2475048-2475067 Msa1172450:CDS 50.0%
GGAGGAAACAAGAGGCCAAA+AGG + chr8_1:2475069-2475088 Msa1172450:CDS 50.0%
GAAACAAGAGGCCAAAAGGG+TGG + chr8_1:2475073-2475092 Msa1172450:CDS 50.0%
! GAGCCTTTTTCCTGCACGAC+AGG + chr8_1:2472779-2472798 Msa1172450:five_prime_UTR 55.0%
GAAGAAAGCAGCGGCAGAGT+CGG - chr8_1:2472807-2472826 None:intergenic 55.0%
!! GCTGCTGTTGGTGATGGTGA+TGG - chr8_1:2472966-2472985 None:intergenic 55.0%
GTAGCCGCTGTCGGTATAGA+TGG - chr8_1:2473042-2473061 None:intergenic 55.0%
AACTCATCCGTAGCCGCTGT+CGG - chr8_1:2473051-2473070 None:intergenic 55.0%
AGCTGTCAGATTCCGGTGAC+CGG - chr8_1:2473079-2473098 None:intergenic 55.0%
ATGGGTGGAGATGCTTCCAC+TGG + chr8_1:2473312-2473331 Msa1172450:CDS 55.0%
AGAGTCGGATCCTGTCGTGC+AGG - chr8_1:2472792-2472811 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 2472660 2476497 2472660 ID=Msa1172450;Name=Msa1172450
chr8_1 mRNA 2472660 2476497 2472660 ID=Msa1172450-mRNA-1;Parent=Msa1172450;Name=Msa1172450-mRNA-1;_AED=0.00;_eAED=0.00;_QI=265|1|1|1|1|1|2|890|518
chr8_1 exon 2472660 2473442 2472660 ID=Msa1172450-mRNA-1:exon:907;Parent=Msa1172450-mRNA-1
chr8_1 exon 2474569 2476497 2474569 ID=Msa1172450-mRNA-1:exon:908;Parent=Msa1172450-mRNA-1
chr8_1 five_prime_UTR 2472660 2472924 2472660 ID=Msa1172450-mRNA-1:five_prime_utr;Parent=Msa1172450-mRNA-1
chr8_1 CDS 2472925 2473442 2472925 ID=Msa1172450-mRNA-1:cds;Parent=Msa1172450-mRNA-1
chr8_1 CDS 2474569 2475607 2474569 ID=Msa1172450-mRNA-1:cds;Parent=Msa1172450-mRNA-1
chr8_1 three_prime_UTR 2475608 2476497 2475608 ID=Msa1172450-mRNA-1:three_prime_utr;Parent=Msa1172450-mRNA-1
Gene Sequence

>Msa1172450

ATGGATGACCACCATAACAATCATGGTCATCACCCTCACCATCACCATCACCAACAGCAGCAACAACAATATGATCTAAGACAGCTAGTGAATGGAACAAGGTCAACCCATTTCCCATCTATACCGACAGCGGCTACGGATGAGTTTTTCTCCGGTCACCGGAATCTGACAGCTTTGTTAACTACTACTACTCATCCTAATCCACAGACACATCAAAACCAACAACAACAACAACAGTATGAGATGATGATGTTAGGTCGTGGAGTAGTTCTTGAAGATTTCAATAGCATCACTACTCATGTACCACCACCACCTTCAACAGCAATAACAACAACAACAACCACCACTGCTAGTGCTAGTGTTTCAACTCCTGAGACCACAGGATATATGGGTGGAGATGCTTCCACTGGAAGATGGCCAAGACAAGAAACTCTTACTCTTCTTGAAATCAGATCTCGTCTTGACCCTAAATTTAAAGAAGCTAATCAAAAAGGTCCTTTATGGGATGAAGTCTCTAGGATAATGTCTGAAGAACATGGATATCAAAGGAGTGGAAAAAAGTGCAGAGAAAAATTTGAGAATCTGTACAAATATTACAAGAAGACAAAAGAAGGTAAAGCAGGAAGGCATGATGGTAAGCATTACAGGTTTTTTCGTCAACTTGAAGCTTTATATGGTGAAAACAGTAACCAAACTTCTCTACCAGAAACCAATTTTGTCAACAACAATAATTTCCATTTCCAACAAACAAGTAATAGCCAAAACCCTCACAATGATCATAGCCTTAGTCTCACTACTAACTCAACTGACTTTGAAATCGATACGTCGTCGTCTGATGATGGCAATGATGTGAAGGGAAAGAAGAAGAGTAGTGGAAGAAGAAGTTGGAAGGTGAAGATAAAAGACTTCATTGATGCACAAATGAAGAAGCTTGTGGAGAAGCAAGAGGAGTGGTTGAGTAAGCTTGTGAAGACACTTGAGGACAAGGAAAAGGAGAGGGCGTTAAGAGAAGAAGAGTGGAGGAAACAAGAGGCCAAAAGGGTGGAAAAAGAACAAAAGTTTTGGAGTAATGAGAGAGCATGGATTGAAGCAAGGGATGCTGCTTTAATGGAAGCTTTGAAGAATTTAGGAGGTAGAGAAATGATTAAGGTTGAAGAAGCTCATGATCATAAGGGTGTAAATGGAATAACTGGAGCAGAGATTCAAAATCAAAATGAAGATGGGAGTGAAATCTTGAATAGTACTGTGAGAGGTTCTGATAATTGTACTCTAAGGGATGATTCTAAGGAAGGAAACAGGAAGAGAAAGGAGAGTTTTTACTTCAACAATAATGAACAATGTTCTATGTACAATCAAGGAAGTGGTTATTGTGATGTTAATGATCAAAGAGAGGAGATTGTGAAACTACAAAGGAATGATCATGGTTCTTCACCTTCTGATTCTAATGTTGGAAATGTAGCTAATGGTGATACTTGCTTTCCTTTCATGATTAGTGAGGGTGGAAATTTGTGGGAGAATTTTGGCTTGAAGATCAATAAAGTAAACCAAAACCATTAA
Protein sequence

>Msa1172450

MDDHHNNHGHHPHHHHHQQQQQQYDLRQLVNGTRSTHFPSIPTAATDEFFSGHRNLTALLTTTTHPNPQTHQNQQQQQQYEMMMLGRGVVLEDFNSITTHVPPPPSTAITTTTTTTASASVSTPETTGYMGGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRHDGKHYRFFRQLEALYGENSNQTSLPETNFVNNNNFHFQQTSNSQNPHNDHSLSLTTNSTDFEIDTSSSDDGNDVKGKKKSSGRRSWKVKIKDFIDAQMKKLVEKQEEWLSKLVKTLEDKEKERALREEEWRKQEAKRVEKEQKFWSNERAWIEARDAALMEALKNLGGREMIKVEEAHDHKGVNGITGAEIQNQNEDGSEILNSTVRGSDNCTLRDDSKEGNRKRKESFYFNNNEQCSMYNQGSGYCDVNDQREEIVKLQRNDHGSSPSDSNVGNVANGDTCFPFMISEGGNLWENFGLKINKVNQNH*