AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1252140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252140 MtrunA17_Chr8g0368151 76.327 490 32 4 1 406 1 490 0.0 723
Msa1252140 MtrunA17_Chr1g0194521 31.166 446 213 8 31 394 101 534 3.54e-54 188
Msa1252140 MtrunA17_Chr2g0282091 24.779 452 252 7 24 390 29 477 7.61e-38 142
Msa1252140 MtrunA17_Chr1g0185601 24.773 440 235 10 55 405 69 501 5.84e-36 138
Msa1252140 MtrunA17_Chr2g0303221 32.210 267 149 5 23 258 31 296 1.17e-30 122
Msa1252140 MtrunA17_Chr4g0021331 30.450 289 164 6 6 258 8 295 3.47e-29 118
Msa1252140 MtrunA17_Chr8g0335951 23.786 412 196 8 24 377 78 429 2.93e-26 109
Msa1252140 MtrunA17_Chr1g0171501 25.747 435 245 9 35 393 151 583 4.14e-26 110
Msa1252140 MtrunA17_Chr7g0256181 22.747 466 272 8 15 400 150 607 2.21e-25 108
Msa1252140 MtrunA17_Chr1g0155351 30.556 252 144 4 43 263 74 325 3.99e-25 105
Msa1252140 MtrunA17_Chr8g0359961 24.242 264 171 3 25 259 35 298 1.08e-24 105
Msa1252140 MtrunA17_Chr3g0132571 20.045 449 269 8 43 404 57 502 1.28e-16 81.6
Msa1252140 MtrunA17_Chr2g0324251 27.138 269 157 6 28 258 37 304 2.68e-16 80.5
Msa1252140 MtrunA17_Chr3g0091741 24.481 241 156 5 71 305 139 359 3.23e-12 68.2
Msa1252140 MtrunA17_Chr3g0136851 25.170 294 164 8 125 386 308 577 7.58e-12 67.4
Msa1252140 MtrunA17_Chr3g0136851 23.485 264 174 4 143 400 249 490 2.92e-11 65.5
Msa1252140 MtrunA17_Chr7g0220501 24.370 238 146 4 99 310 290 519 2.07e-11 65.9
Msa1252140 MtrunA17_Chr4g0033981 23.485 264 173 4 119 382 319 553 5.65e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252140 AT1G60770.1 52.049 488 149 5 4 406 3 490 6.01e-173 493
Msa1252140 AT1G02370.1 33.406 458 212 8 33 403 84 535 1.39e-69 229
Msa1252140 AT4G01990.1 31.315 479 234 9 12 403 30 500 1.92e-59 201
Msa1252140 AT4G02820.1 26.984 441 230 9 50 405 88 521 2.82e-41 153
Msa1252140 AT4G21705.1 24.839 467 263 10 24 404 26 490 2.63e-39 147
Msa1252140 AT1G02150.1 25.342 438 243 7 2 355 46 483 1.03e-33 132
Msa1252140 AT2G20710.1 28.090 267 161 4 23 258 38 304 5.13e-25 107
Msa1252140 AT5G09450.1 27.490 251 150 4 43 261 75 325 2.83e-23 101
Msa1252140 AT1G80270.1 24.429 438 244 12 37 393 142 573 4.26e-23 102
Msa1252140 AT1G80270.3 24.429 438 244 12 37 393 142 573 4.26e-23 102
Msa1252140 AT1G80270.2 24.429 438 244 12 37 393 142 573 4.26e-23 102
Msa1252140 AT1G80270.5 24.429 438 244 12 37 393 142 573 4.26e-23 102
Msa1252140 AT1G80270.4 24.429 438 244 12 37 393 142 573 4.26e-23 102
Msa1252140 AT2G20710.2 32.323 198 104 3 91 258 12 209 4.64e-23 100
Msa1252140 AT5G27460.1 22.958 453 255 9 28 390 43 491 1.23e-21 97.1
Msa1252140 AT1G15480.1 22.727 440 253 10 35 393 138 571 5.73e-19 89.4
Msa1252140 AT3G15590.1 22.517 453 256 9 31 394 141 587 4.61e-16 80.5
Msa1252140 AT3G15590.2 22.517 453 256 9 31 394 141 587 4.61e-16 80.5
Msa1252140 AT1G28020.1 28.571 252 141 7 40 259 60 304 9.26e-12 67.0
Msa1252140 AT5G65560.1 21.386 332 207 6 119 403 390 714 6.49e-11 64.7
Msa1252140 AT5G65560.2 21.386 332 207 6 119 403 390 714 6.49e-11 64.7
Msa1252140 AT5G65560.3 21.386 332 207 6 119 403 390 714 6.49e-11 64.7
Msa1252140 AT2G35130.1 25.773 194 118 5 99 292 384 551 8.93e-11 64.3

Find 87 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAGTATACGAGGTTTAT+AGG 0.245815 8_2:-48960596 Msa1252140:CDS
ATTACATTGTATGGGAAAAT+AGG 0.247775 8_2:-48960618 Msa1252140:CDS
GCTGCAGTTAATGATATTTC+CGG 0.253859 8_2:-48960819 Msa1252140:CDS
GTCGATAGCAATTTACAATT+AGG 0.281231 8_2:-48964037 None:intergenic
CAGTTTCTAATTACATTGTA+TGG 0.283082 8_2:-48960627 Msa1252140:CDS
GTGGGAAGCGCGTTTATAAA+TGG 0.289722 8_2:-48963791 Msa1252140:CDS
CCAAGCTATACATATTGATT+TGG 0.336982 8_2:-48961149 Msa1252140:CDS
AGGAGCGTGCTCGGAGGAGG+GGG 0.367351 8_2:-48960361 Msa1252140:CDS
ATTATATCAACCTGCTCTTA+AGG 0.369801 8_2:-48963730 Msa1252140:intron
CTTAATCAGTTTATTAAGAG+TGG 0.375038 8_2:-48963810 Msa1252140:CDS
ATATAGCCTCAAGCAACTTC+AGG 0.377618 8_2:+48959991 None:intergenic
TAAAATCTGCATTTCGCAAA+TGG 0.388939 8_2:+48960297 None:intergenic
GTTGGCAATGGATTGTTTAT+CGG 0.390754 8_2:-48960273 Msa1252140:CDS
CATACAATGTAATTAGAAAC+TGG 0.399606 8_2:+48960628 None:intergenic
AGTCTTTATCATATTCCTCT+TGG 0.414359 8_2:+48961180 None:intergenic
AGAAGGTGCACTTAAGGAAT+TGG 0.419645 8_2:-48960685 Msa1252140:CDS
AAGAAATCTGTGGAATCTGC+AGG 0.431533 8_2:-48960122 Msa1252140:CDS
CAAAGTATACGAGGTTTATA+GGG 0.436615 8_2:-48960595 Msa1252140:CDS
TATAGGGTCTGGCGTTCTCT+AGG 0.443692 8_2:-48960579 Msa1252140:intron
TAAAGGAGCGTGCTCGGAGG+AGG 0.446366 8_2:-48960364 Msa1252140:CDS
ATTCTTACACGTATAATGTA+TGG 0.452805 8_2:-48960854 Msa1252140:CDS
CGCGTTTATAAATGGGAAGT+TGG 0.453242 8_2:-48963783 Msa1252140:CDS
ACATTATACGTGTAAGAATC+CGG 0.466552 8_2:+48960858 None:intergenic
AGCTTTCATTTCTTGCATGA+TGG 0.470995 8_2:+48960893 None:intergenic
AAGAGGGACGGACGAATCAC+TGG 0.473387 8_2:-48960771 Msa1252140:CDS
AAAGGAGCGTGCTCGGAGGA+GGG 0.478966 8_2:-48960363 Msa1252140:CDS
TATACGAGGTTTATAGGGTC+TGG 0.480388 8_2:-48960590 Msa1252140:CDS
TTATCGGAAGCAATCTCAAT+TGG 0.480664 8_2:-48960257 Msa1252140:CDS
TGATATTTCCGGTGTTGAAA+GGG 0.481939 8_2:-48960808 Msa1252140:CDS
GAAGGCAGAAGGTGCACTTA+AGG 0.485117 8_2:-48960691 Msa1252140:CDS
GTACCTATTGTCTCAGATGA+TGG 0.485727 8_2:+48960209 None:intergenic
TGGGAAGCGCGTTTATAAAT+GGG 0.485728 8_2:-48963790 Msa1252140:CDS
TGTGGAATCTGCAGGGGAAG+AGG 0.492605 8_2:-48960114 Msa1252140:CDS
GTTCCATCATCTGAGACAAT+AGG 0.495080 8_2:-48960212 Msa1252140:CDS
ATGATATTTCCGGTGTTGAA+AGG 0.495451 8_2:-48960809 Msa1252140:CDS
TGTTCTTTGTTGCTCAGTGA+TGG 0.501185 8_2:+48963965 None:intergenic
AGTTTCTAATTACATTGTAT+GGG 0.504578 8_2:-48960626 Msa1252140:CDS
CCAAATCAATATGTATAGCT+TGG 0.505400 8_2:+48961149 None:intergenic
ATTAGAACTTATGCGGCTGC+TGG 0.506012 8_2:-48960077 Msa1252140:CDS
GAGCAAGAGAAGGATGTTGA+TGG 0.508667 8_2:-48960170 Msa1252140:CDS
ATGTCTCTGATGCAACGTTA+CGG 0.511411 8_2:-48963936 Msa1252140:CDS
AAGGAGCGTGCTCGGAGGAG+GGG 0.512913 8_2:-48960362 Msa1252140:CDS
GTAGAGGGAACGGTGAAAAG+TGG 0.515345 8_2:-48960235 Msa1252140:CDS
ACGGACGAATCACTGGAGAT+TGG 0.517783 8_2:-48960764 Msa1252140:CDS
TATAGCCTCAAGCAACTTCA+GGG 0.518335 8_2:+48959992 None:intergenic
TTCATTTCTTGCATGATGGA+CGG 0.522700 8_2:+48960897 None:intergenic
ATATGCAGAATTAGATATGC+TGG 0.533822 8_2:-48960402 Msa1252140:intron
GGAGAAGGCTGAAGAACTAA+AGG 0.536610 8_2:-48960381 Msa1252140:CDS
AAGAACTAAAGGAGCGTGCT+CGG 0.537452 8_2:-48960370 Msa1252140:CDS
GGGTTATTGATGAGATGAAG+AGG 0.539631 8_2:-48960788 Msa1252140:CDS
TTAATCAGTTTATTAAGAGT+GGG 0.543698 8_2:-48963809 Msa1252140:CDS
ATCAATAACCCTTTCAACAC+CGG 0.544306 8_2:+48960800 None:intergenic
CGCTTACGAAGCTGAGACAA+CGG 0.546531 8_2:-48963755 Msa1252140:CDS
ATCTCAATTGGTAGAGGGAA+CGG 0.552769 8_2:-48960245 Msa1252140:CDS
CACTTAAGGAATTGGAAAAG+AGG 0.555566 8_2:-48960677 Msa1252140:CDS
GAAGCAATCTCAATTGGTAG+AGG 0.559094 8_2:-48960251 Msa1252140:CDS
GGTTATTGATGAGATGAAGA+GGG 0.563994 8_2:-48960787 Msa1252140:CDS
ATCATTGATTAGAACTTATG+CGG 0.564943 8_2:-48960084 Msa1252140:CDS
AAGGAATTGGAAAAGAGGAA+TGG 0.570113 8_2:-48960672 Msa1252140:CDS
TTGTTGCTCAGTGATGGTGA+TGG 0.571220 8_2:+48963971 None:intergenic
GGAGCGTGCTCGGAGGAGGG+GGG 0.575173 8_2:-48960360 Msa1252140:CDS
AGAATTAGATATGCTGGAGA+AGG 0.575282 8_2:-48960396 Msa1252140:CDS
GAACTTATGCGGCTGCTGGT+AGG 0.578729 8_2:-48960073 Msa1252140:CDS
TACTTGAAACTCTTCAAAGA+CGG 0.580431 8_2:-48963861 Msa1252140:CDS
AACTTGTTTGAGAAGGCAGA+AGG 0.582161 8_2:-48960702 Msa1252140:CDS
CGAAATCTTGAAGAAATCTG+TGG 0.586042 8_2:-48960132 Msa1252140:CDS
TATGCAACGACGATTGAAGA+TGG 0.587542 8_2:-48960039 Msa1252140:CDS
GAAAGCTAGCAATATCATGC+CGG 0.596625 8_2:-48960877 Msa1252140:CDS
AATTTACATGAATCACTCCT+CGG 0.599378 8_2:+48959968 None:intergenic
CATCAACATAAATAGATGCA+AGG 0.609623 8_2:+48960727 None:intergenic
AGAAATCTGTGGAATCTGCA+GGG 0.614011 8_2:-48960121 Msa1252140:CDS
TAGAGGGAACGGTGAAAAGT+GGG 0.618228 8_2:-48960234 Msa1252140:CDS
TTGAAACTCTTCAAAGACGG+TGG 0.620058 8_2:-48963858 Msa1252140:CDS
AGATTCCCTGAAGTTGCTTG+AGG 0.620494 8_2:-48959997 Msa1252140:CDS
AAGCAATCTCAATTGGTAGA+GGG 0.624857 8_2:-48960250 Msa1252140:CDS
GATTTGGATGCAAAAGCTAG+AGG 0.625939 8_2:-48961133 Msa1252140:CDS
GAAGCACTACGAGCAAGAGA+AGG 0.634627 8_2:-48960180 Msa1252140:CDS
TGATGCTAACTTGTTTGAGA+AGG 0.634964 8_2:-48960709 Msa1252140:CDS
ACTTCTCAACTGCTACTGCA+AGG 0.646187 8_2:-48961044 Msa1252140:CDS
ATTGATGAGATGAAGAGGGA+CGG 0.662413 8_2:-48960783 Msa1252140:CDS
TTGATGACTACTAAAGCTGA+AGG 0.664736 8_2:-48961019 Msa1252140:intron
GAAATCTGTGGAATCTGCAG+GGG 0.667214 8_2:-48960120 Msa1252140:CDS
TATCAGAAACAACGGCCAAG+AGG 0.668391 8_2:-48961195 Msa1252140:CDS
GTTGCTTGAGGCTATATCCG+AGG 0.680098 8_2:-48959985 Msa1252140:CDS
GTTGCAGTTATCAGAAACAA+CGG 0.684228 8_2:-48961203 Msa1252140:intron
AACTAAAGGAGCGTGCTCGG+AGG 0.698646 8_2:-48960367 Msa1252140:CDS
GAAAATAGGCAAAGTATACG+AGG 0.724011 8_2:-48960604 Msa1252140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAAATAAGATTATATAT+TGG - chr8_2:48960360-48960379 Msa1252140:CDS 10.0%
!! AATGTATTATTTAAATTGAA+AGG + chr8_2:48962648-48962667 None:intergenic 10.0%
!!! AATTGTTTTTACAAAACTTA+TGG - chr8_2:48960589-48960608 Msa1252140:CDS 15.0%
!! CATATAAACTTATCATATAA+GGG - chr8_2:48960881-48960900 Msa1252140:CDS 15.0%
!!! ATTTTCAACTTATTTTCATA+AGG + chr8_2:48960997-48961016 None:intergenic 15.0%
!! AATATAATGATATATTAGCT+TGG - chr8_2:48961267-48961286 Msa1252140:intron 15.0%
!!! ATATAATGATATATTAGCTT+GGG - chr8_2:48961268-48961287 Msa1252140:intron 15.0%
!!! AAAAACTAACTTTATTTAAC+CGG + chr8_2:48961797-48961816 None:intergenic 15.0%
!!! TAAATAAAGTTAGTTTTTTC+TGG - chr8_2:48961799-48961818 Msa1252140:intron 15.0%
!! TTAATCAGTTTATTAAGAGT+GGG - chr8_2:48960194-48960213 Msa1252140:CDS 20.0%
!!! AATAAGATTATATATTGGCT+TGG - chr8_2:48960365-48960384 Msa1252140:CDS 20.0%
!! CATATGTATAATATTACGTA+AGG - chr8_2:48960535-48960554 Msa1252140:intron 20.0%
!! AAATGCTTATGATAAGAATT+TGG - chr8_2:48960772-48960791 Msa1252140:CDS 20.0%
!! GCATATAAACTTATCATATA+AGG - chr8_2:48960880-48960899 Msa1252140:CDS 20.0%
!!! AAAGTCAATAGTTTTAATGT+AGG - chr8_2:48960940-48960959 Msa1252140:intron 20.0%
!! GAATGAAGTTATTTATATCA+TGG - chr8_2:48961295-48961314 Msa1252140:intron 20.0%
!!! GCCAGTTATTTTTTTTTTTT+TGG - chr8_2:48961399-48961418 Msa1252140:intron 20.0%
!! GCCAAAAAAAAAAAAATAAC+TGG + chr8_2:48961403-48961422 None:intergenic 20.0%
!!! TATTTTTTTTTTTTTGGCTG+TGG - chr8_2:48961405-48961424 Msa1252140:intron 20.0%
!!! CATCAATTAATTTTTTGACA+TGG + chr8_2:48962358-48962377 None:intergenic 20.0%
!! TACTTCAAAAACTCATTATA+TGG + chr8_2:48962435-48962454 None:intergenic 20.0%
!! TTCTTTATGAATTATGAATG+TGG - chr8_2:48962510-48962529 Msa1252140:intron 20.0%
!! TTGTCCATGAATATAAATTA+TGG + chr8_2:48962765-48962784 None:intergenic 20.0%
!! AGTTTCTAATTACATTGTAT+GGG - chr8_2:48963377-48963396 Msa1252140:intron 20.0%
!!! AAAAACTTGGGAAATATTTT+TGG - chr8_2:48963679-48963698 Msa1252140:intron 20.0%
! CTTAATCAGTTTATTAAGAG+TGG - chr8_2:48960193-48960212 Msa1252140:CDS 25.0%
!!! GTTAGTGTTGTTATTGATTT+AGG - chr8_2:48960450-48960469 Msa1252140:intron 25.0%
!!! TTATTGATTTAGGTTCTGTT+TGG - chr8_2:48960460-48960479 Msa1252140:intron 25.0%
! AAGTTAATGAAGAATGTCAT+AGG - chr8_2:48960627-48960646 Msa1252140:CDS 25.0%
! GCTATATCTATATGTTTCTT+AGG - chr8_2:48960820-48960839 Msa1252140:CDS 25.0%
! CCTAGAAAATACTAGTAATT+TGG + chr8_2:48961213-48961232 None:intergenic 25.0%
!! CCAAATTACTAGTATTTTCT+AGG - chr8_2:48961210-48961229 Msa1252140:intron 25.0%
! TATCATGGAATCATAAAATG+AGG - chr8_2:48961310-48961329 Msa1252140:intron 25.0%
!! TATTAGTTTCAACCTTTGTT+AGG - chr8_2:48961341-48961360 Msa1252140:intron 25.0%
!! GAAGAGAAAATAATTAGCTT+TGG - chr8_2:48962072-48962091 Msa1252140:intron 25.0%
! AATTTAATAAAACGACTCAC+AGG + chr8_2:48962332-48962351 None:intergenic 25.0%
! CGTTCCATAATTTATATTCA+TGG - chr8_2:48962758-48962777 Msa1252140:intron 25.0%
! ATTCTTACACGTATAATGTA+TGG - chr8_2:48963149-48963168 Msa1252140:intron 25.0%
! CATACAATGTAATTAGAAAC+TGG + chr8_2:48963378-48963397 None:intergenic 25.0%
! CAGTTTCTAATTACATTGTA+TGG - chr8_2:48963376-48963395 Msa1252140:intron 25.0%
! ATTACATTGTATGGGAAAAT+AGG - chr8_2:48963385-48963404 Msa1252140:intron 25.0%
!! ATCATTGATTAGAACTTATG+CGG - chr8_2:48963919-48963938 Msa1252140:CDS 25.0%
TACTTGAAACTCTTCAAAGA+CGG - chr8_2:48960142-48960161 Msa1252140:CDS 30.0%
ATTATATCAACCTGCTCTTA+AGG - chr8_2:48960273-48960292 Msa1252140:CDS 30.0%
!!! TTGTTACTGCTTGTTTTTTC+TGG - chr8_2:48960407-48960426 Msa1252140:intron 30.0%
!!! TTTTTTCTGGATGTGAAACT+GGG - chr8_2:48960420-48960439 Msa1252140:intron 30.0%
CATAAACTACAACTCACTAA+GGG + chr8_2:48960731-48960750 None:intergenic 30.0%
TCATAAACTACAACTCACTA+AGG + chr8_2:48960732-48960751 None:intergenic 30.0%
GAGTTTATAGAAATCGCTTA+TGG + chr8_2:48961034-48961053 None:intergenic 30.0%
! ATGATATATTAGCTTGGGTT+TGG - chr8_2:48961273-48961292 Msa1252140:intron 30.0%
AGCCTTTGGTTATTAATATC+AGG - chr8_2:48961431-48961450 Msa1252140:intron 30.0%
CACCTGATATTAATAACCAA+AGG + chr8_2:48961436-48961455 None:intergenic 30.0%
CTTTGGTTATTAATATCAGG+TGG - chr8_2:48961434-48961453 Msa1252140:intron 30.0%
!! GTTTTGTTGTCTTTTGCAAT+TGG - chr8_2:48961462-48961481 Msa1252140:intron 30.0%
! TCTTTTGCAATTGGTATAGT+GGG - chr8_2:48961471-48961490 Msa1252140:intron 30.0%
!! TATATCTACTCTAGAGTTAC+TGG + chr8_2:48961927-48961946 None:intergenic 30.0%
!!! GAGTCTTGGTTATTTTTCTT+TGG - chr8_2:48962273-48962292 Msa1252140:intron 30.0%
!!! GGTTATTTTTCTTTGGTTCA+TGG - chr8_2:48962280-48962299 Msa1252140:intron 30.0%
TCAAATGCAGTGGTTTATAA+AGG - chr8_2:48962538-48962557 Msa1252140:intron 30.0%
! TGTTGATGTTGTTGACTATA+TGG - chr8_2:48962676-48962695 Msa1252140:intron 30.0%
ATTTAGAGATTATACGTAGC+AGG - chr8_2:48962730-48962749 Msa1252140:intron 30.0%
AGTCTTTATCATATTCCTCT+TGG + chr8_2:48962826-48962845 None:intergenic 30.0%
CCAAATCAATATGTATAGCT+TGG + chr8_2:48962857-48962876 None:intergenic 30.0%
! CCAAGCTATACATATTGATT+TGG - chr8_2:48962854-48962873 Msa1252140:intron 30.0%
!! GGTGTCATTGAAAAAAATGA+AGG - chr8_2:48963005-48963024 Msa1252140:intron 30.0%
TTATAAGACAGTGAACTCAA+AGG + chr8_2:48963042-48963061 None:intergenic 30.0%
TTGTGACTCTATACTAAAGT+AGG - chr8_2:48963067-48963086 Msa1252140:intron 30.0%
ACATTATACGTGTAAGAATC+CGG + chr8_2:48963148-48963167 None:intergenic 30.0%
CATCAACATAAATAGATGCA+AGG + chr8_2:48963279-48963298 None:intergenic 30.0%
CAAAGTATACGAGGTTTATA+GGG - chr8_2:48963408-48963427 Msa1252140:intron 30.0%
! TAGCTTATGTTTGCAGTTTT+AGG + chr8_2:48963459-48963478 None:intergenic 30.0%
AAGCTATCTGAATATGATTC+AGG - chr8_2:48963473-48963492 Msa1252140:intron 30.0%
! ATCTGAATATGATTCAGGTT+TGG - chr8_2:48963478-48963497 Msa1252140:intron 30.0%
!!! TATTCGAGTTGCAAATGTTT+TGG - chr8_2:48963571-48963590 Msa1252140:intron 30.0%
ATATGCAGAATTAGATATGC+TGG - chr8_2:48963601-48963620 Msa1252140:intron 30.0%
! ATTTCCCAAGTTTTTGCATT+AGG + chr8_2:48963674-48963693 None:intergenic 30.0%
TAAAATCTGCATTTCGCAAA+TGG + chr8_2:48963709-48963728 None:intergenic 30.0%
TGCAAAAATACCTTAAGAGC+AGG + chr8_2:48960286-48960305 None:intergenic 35.0%
!!! TGCATTTAAGCGCTTTTTCT+AGG - chr8_2:48960302-48960321 Msa1252140:CDS 35.0%
!!! GTTTTTTCTGGATGTGAAAC+TGG - chr8_2:48960419-48960438 Msa1252140:intron 35.0%
!! AGGCTATAAGCTGTTTTCAT+AGG - chr8_2:48960960-48960979 Msa1252140:intron 35.0%
! GTTTTTCTGCGTAATTTAGC+AGG - chr8_2:48961377-48961396 Msa1252140:intron 35.0%
TGGTTATTAATATCAGGTGG+TGG - chr8_2:48961437-48961456 Msa1252140:intron 35.0%
GGTTATTAATATCAGGTGGT+GGG - chr8_2:48961438-48961457 Msa1252140:intron 35.0%
! GTCTTTTGCAATTGGTATAG+TGG - chr8_2:48961470-48961489 Msa1252140:intron 35.0%
GATATTTGCCATAGGTAACT+GGG - chr8_2:48961509-48961528 Msa1252140:intron 35.0%
! TTTTACATCCCCTTCATAAG+TGG - chr8_2:48961544-48961563 Msa1252140:intron 35.0%
AACGTATTCTGTAGATCTTG+AGG - chr8_2:48961642-48961661 Msa1252140:intron 35.0%
CTCTATTATTGTACCCTCAT+CGG + chr8_2:48962053-48962072 None:intergenic 35.0%
!!! GTGGATTTGTGCTTGTTTTA+AGG - chr8_2:48962169-48962188 Msa1252140:intron 35.0%
!!! GATTTGTGCTTGTTTTAAGG+AGG - chr8_2:48962172-48962191 Msa1252140:intron 35.0%
TGGTTTATAAAGGAGTGAGA+TGG - chr8_2:48962548-48962567 Msa1252140:intron 35.0%
GTTGCAGTTATCAGAAACAA+CGG - chr8_2:48962800-48962819 Msa1252140:intron 35.0%
!! ACAGATGATTTTTCAGACTC+GGG + chr8_2:48962929-48962948 None:intergenic 35.0%
!! CACAGATGATTTTTCAGACT+CGG + chr8_2:48962930-48962949 None:intergenic 35.0%
CTGAAAAATCATCTGTGCTA+TGG - chr8_2:48962933-48962952 Msa1252140:intron 35.0%
! TTGATGACTACTAAAGCTGA+AGG - chr8_2:48962984-48963003 Msa1252140:intron 35.0%
! TTCATTTCTTGCATGATGGA+CGG + chr8_2:48963109-48963128 None:intergenic 35.0%
AGCTTTCATTTCTTGCATGA+TGG + chr8_2:48963113-48963132 None:intergenic 35.0%
GCTGCAGTTAATGATATTTC+CGG - chr8_2:48963184-48963203 Msa1252140:intron 35.0%
! ATGATATTTCCGGTGTTGAA+AGG - chr8_2:48963194-48963213 Msa1252140:intron 35.0%
! TGATATTTCCGGTGTTGAAA+GGG - chr8_2:48963195-48963214 Msa1252140:intron 35.0%
ATCAATAACCCTTTCAACAC+CGG + chr8_2:48963206-48963225 None:intergenic 35.0%
GGTTATTGATGAGATGAAGA+GGG - chr8_2:48963216-48963235 Msa1252140:intron 35.0%
!! TGATGCTAACTTGTTTGAGA+AGG - chr8_2:48963294-48963313 Msa1252140:intron 35.0%
CACTTAAGGAATTGGAAAAG+AGG - chr8_2:48963326-48963345 Msa1252140:intron 35.0%
AAGGAATTGGAAAAGAGGAA+TGG - chr8_2:48963331-48963350 Msa1252140:intron 35.0%
GAAAATAGGCAAAGTATACG+AGG - chr8_2:48963399-48963418 Msa1252140:intron 35.0%
GCAAAGTATACGAGGTTTAT+AGG - chr8_2:48963407-48963426 Msa1252140:intron 35.0%
! GGTTAACTTGAAAGATTTCC+CGG - chr8_2:48963499-48963518 Msa1252140:intron 35.0%
! GTTAACTTGAAAGATTTCCC+GGG - chr8_2:48963500-48963519 Msa1252140:intron 35.0%
!! AGAAAAGTGTTTCCGTTAGT+GGG - chr8_2:48963526-48963545 Msa1252140:intron 35.0%
!!! GAGTTGCAAATGTTTTGGTT+GGG - chr8_2:48963576-48963595 Msa1252140:intron 35.0%
!!! AGTTGCAAATGTTTTGGTTG+GGG - chr8_2:48963577-48963596 Msa1252140:intron 35.0%
AGAATTAGATATGCTGGAGA+AGG - chr8_2:48963607-48963626 Msa1252140:intron 35.0%
CAAGCCTAATGCAAAAACTT+GGG - chr8_2:48963667-48963686 Msa1252140:intron 35.0%
!! GCGAAATGCAGATTTTAAGT+TGG - chr8_2:48963712-48963731 Msa1252140:intron 35.0%
!!! TGCAGATTTTAAGTTGGCAA+TGG - chr8_2:48963718-48963737 Msa1252140:intron 35.0%
!! GTTGGCAATGGATTGTTTAT+CGG - chr8_2:48963730-48963749 Msa1252140:intron 35.0%
TTATCGGAAGCAATCTCAAT+TGG - chr8_2:48963746-48963765 Msa1252140:CDS 35.0%
AAGCAATCTCAATTGGTAGA+GGG - chr8_2:48963753-48963772 Msa1252140:CDS 35.0%
CGAAATCTTGAAGAAATCTG+TGG - chr8_2:48963871-48963890 Msa1252140:CDS 35.0%
TGTTCTTTGTTGCTCAGTGA+TGG + chr8_2:48960041-48960060 None:intergenic 40.0%
! CGTTGCATCAGAGACATTTT+TGG + chr8_2:48960064-48960083 None:intergenic 40.0%
ATGTCTCTGATGCAACGTTA+CGG - chr8_2:48960067-48960086 Msa1252140:CDS 40.0%
TTGAAACTCTTCAAAGACGG+TGG - chr8_2:48960145-48960164 Msa1252140:CDS 40.0%
! TGGGAAGCGCGTTTATAAAT+GGG - chr8_2:48960213-48960232 Msa1252140:CDS 40.0%
CGCGTTTATAAATGGGAAGT+TGG - chr8_2:48960220-48960239 Msa1252140:CDS 40.0%
TCAAAGAAGCCAATCCAGAA+GGG - chr8_2:48960705-48960724 Msa1252140:CDS 40.0%
! TTTGCAATTGGTATAGTGGG+TGG - chr8_2:48961474-48961493 Msa1252140:intron 40.0%
!! TTGCAATTGGTATAGTGGGT+GGG - chr8_2:48961475-48961494 Msa1252140:intron 40.0%
AAGCGTAGGATATTTGCCAT+AGG - chr8_2:48961501-48961520 Msa1252140:intron 40.0%
GGATATTTGCCATAGGTAAC+TGG - chr8_2:48961508-48961527 Msa1252140:intron 40.0%
GTCATACACCACTTATGAAG+GGG + chr8_2:48961555-48961574 None:intergenic 40.0%
CGTCATACACCACTTATGAA+GGG + chr8_2:48961556-48961575 None:intergenic 40.0%
CCTTCATAAGTGGTGTATGA+CGG - chr8_2:48961554-48961573 Msa1252140:intron 40.0%
TAGATCTTGAGGAAAGCAGA+CGG - chr8_2:48961653-48961672 Msa1252140:intron 40.0%
AGTGCATCCAATAAGATACC+AGG + chr8_2:48961702-48961721 None:intergenic 40.0%
TGGTATCTTATTGGATGCAC+TGG - chr8_2:48961701-48961720 Msa1252140:intron 40.0%
! GAATCCGTTGCTATTGTACT+TGG - chr8_2:48961826-48961845 Msa1252140:intron 40.0%
CTTGCCAAGTACAATAGCAA+CGG + chr8_2:48961833-48961852 None:intergenic 40.0%
GTCTTCTTAGTCTGCTTGAA+AGG - chr8_2:48961897-48961916 Msa1252140:intron 40.0%
TATTATCCTTCAGTCACTCC+AGG - chr8_2:48962111-48962130 Msa1252140:intron 40.0%
!!! TGTCTGTTTTTGGCCTTTTG+TGG - chr8_2:48962218-48962237 Msa1252140:intron 40.0%
CTCTAGCTACAAAGCCAAAT+CGG + chr8_2:48962247-48962266 None:intergenic 40.0%
! TCTCTAAATCTAGAGCTGCA+TGG + chr8_2:48962719-48962738 None:intergenic 40.0%
GATTTGGATGCAAAAGCTAG+AGG - chr8_2:48962870-48962889 Msa1252140:intron 40.0%
!! CAGATGATTTTTCAGACTCG+GGG + chr8_2:48962928-48962947 None:intergenic 40.0%
!!! ATGATGGACGGAATCTTTTC+TGG + chr8_2:48963097-48963116 None:intergenic 40.0%
GAAAGCTAGCAATATCATGC+CGG - chr8_2:48963126-48963145 Msa1252140:intron 40.0%
GGGTTATTGATGAGATGAAG+AGG - chr8_2:48963215-48963234 Msa1252140:intron 40.0%
ATTGATGAGATGAAGAGGGA+CGG - chr8_2:48963220-48963239 Msa1252140:intron 40.0%
! AACTTGTTTGAGAAGGCAGA+AGG - chr8_2:48963301-48963320 Msa1252140:intron 40.0%
! AGAAGGTGCACTTAAGGAAT+TGG - chr8_2:48963318-48963337 Msa1252140:intron 40.0%
TATACGAGGTTTATAGGGTC+TGG - chr8_2:48963413-48963432 Msa1252140:intron 40.0%
!! CAGAAAAGTGTTTCCGTTAG+TGG - chr8_2:48963525-48963544 Msa1252140:intron 40.0%
!!! CGAGTTGCAAATGTTTTGGT+TGG - chr8_2:48963575-48963594 Msa1252140:intron 40.0%
! CCAAGTTTTTGCATTAGGCT+TGG + chr8_2:48963669-48963688 None:intergenic 40.0%
CCAAGCCTAATGCAAAAACT+TGG - chr8_2:48963666-48963685 Msa1252140:intron 40.0%
GAAGCAATCTCAATTGGTAG+AGG - chr8_2:48963752-48963771 Msa1252140:CDS 40.0%
ATCTCAATTGGTAGAGGGAA+CGG - chr8_2:48963758-48963777 Msa1252140:CDS 40.0%
! GTTCCATCATCTGAGACAAT+AGG - chr8_2:48963791-48963810 Msa1252140:CDS 40.0%
GTACCTATTGTCTCAGATGA+TGG + chr8_2:48963797-48963816 None:intergenic 40.0%
AAGAAATCTGTGGAATCTGC+AGG - chr8_2:48963881-48963900 Msa1252140:CDS 40.0%
AGAAATCTGTGGAATCTGCA+GGG - chr8_2:48963882-48963901 Msa1252140:CDS 40.0%
TATGCAACGACGATTGAAGA+TGG - chr8_2:48963964-48963983 Msa1252140:five_prime_UTR 40.0%
TATAGCCTCAAGCAACTTCA+GGG + chr8_2:48964014-48964033 None:intergenic 40.0%
ATATAGCCTCAAGCAACTTC+AGG + chr8_2:48964015-48964034 None:intergenic 40.0%
! TTGTTGCTCAGTGATGGTGA+TGG + chr8_2:48960035-48960054 None:intergenic 45.0%
! CGCTTCGTCTAAGTGCTTTT+TGG + chr8_2:48960119-48960138 None:intergenic 45.0%
! GTGGGAAGCGCGTTTATAAA+TGG - chr8_2:48960212-48960231 Msa1252140:CDS 45.0%
CTCAAAGAAGCCAATCCAGA+AGG - chr8_2:48960704-48960723 Msa1252140:CDS 45.0%
AAGTCAATCCCAAACCCACT+TGG - chr8_2:48961088-48961107 Msa1252140:CDS 45.0%
AGTCAATCCCAAACCCACTT+GGG - chr8_2:48961089-48961108 Msa1252140:CDS 45.0%
CCAAATTAGCCCACCGAAAT+TGG + chr8_2:48961165-48961184 None:intergenic 45.0%
!! CCAATTTCGGTGGGCTAATT+TGG - chr8_2:48961162-48961181 Msa1252140:CDS 45.0%
GTTTCAACCTTTGTTAGGCG+AGG - chr8_2:48961346-48961365 Msa1252140:intron 45.0%
CAGTTTACCTCGCCTAACAA+AGG + chr8_2:48961356-48961375 None:intergenic 45.0%
TTTGGCTGTGGAATAGCCTT+TGG - chr8_2:48961417-48961436 Msa1252140:intron 45.0%
!! TGCAATTGGTATAGTGGGTG+GGG - chr8_2:48961476-48961495 Msa1252140:intron 45.0%
TGAAGGGGATGTAAAACACG+CGG + chr8_2:48961540-48961559 None:intergenic 45.0%
CCGTCATACACCACTTATGA+AGG + chr8_2:48961557-48961576 None:intergenic 45.0%
TGTCGACACTCCATATGGAT+GGG - chr8_2:48961580-48961599 Msa1252140:intron 45.0%
GGTTGAAAGTCCCATCCATA+TGG + chr8_2:48961593-48961612 None:intergenic 45.0%
TTATAGATGAGCCGTTCCAC+CGG + chr8_2:48961624-48961643 None:intergenic 45.0%
AGATCTTGAGGAAAGCAGAC+GGG - chr8_2:48961654-48961673 Msa1252140:intron 45.0%
CAATCAATAAGCTTCCTGCC+TGG - chr8_2:48961681-48961700 Msa1252140:intron 45.0%
CTTCCTGCCTGGTATCTTAT+TGG - chr8_2:48961692-48961711 Msa1252140:intron 45.0%
CATCCAATAAGATACCAGGC+AGG + chr8_2:48961698-48961717 None:intergenic 45.0%
TACCAGACTATGAGATAGCC+TGG + chr8_2:48961727-48961746 None:intergenic 45.0%
GTCTACCTGATTCAGTCTAC+TGG + chr8_2:48961757-48961776 None:intergenic 45.0%
AGCTACGACTTCTTCCTTCT+GGG + chr8_2:48961860-48961879 None:intergenic 45.0%
AAGCTCAAGCTCAAAGCTAC+TGG + chr8_2:48961976-48961995 None:intergenic 45.0%
TCCACATAACCACACTAGCA+CGG + chr8_2:48962154-48962173 None:intergenic 45.0%
! GCCTTTTGTGGTTTCCGATT+TGG - chr8_2:48962230-48962249 Msa1252140:intron 45.0%
GCCAAATCGGAAACCACAAA+AGG + chr8_2:48962234-48962253 None:intergenic 45.0%
!! AGCTAGAGTGTTGAGAGTCT+TGG - chr8_2:48962259-48962278 Msa1252140:intron 45.0%
TGTGGATGCTTCAAATGCAG+TGG - chr8_2:48962528-48962547 Msa1252140:intron 45.0%
AGGAGTGAGATGGTGAACTT+AGG - chr8_2:48962558-48962577 Msa1252140:intron 45.0%
TATCAGAAACAACGGCCAAG+AGG - chr8_2:48962808-48962827 Msa1252140:intron 45.0%
ACTTCTCAACTGCTACTGCA+AGG - chr8_2:48962959-48962978 Msa1252140:intron 45.0%
TGCAGCTTGATTCCCACTAA+CGG + chr8_2:48963541-48963560 None:intergenic 45.0%
GGAGAAGGCTGAAGAACTAA+AGG - chr8_2:48963622-48963641 Msa1252140:intron 45.0%
! AAGAACTAAAGGAGCGTGCT+CGG - chr8_2:48963633-48963652 Msa1252140:intron 45.0%
TAGAGGGAACGGTGAAAAGT+GGG - chr8_2:48963769-48963788 Msa1252140:CDS 45.0%
GAGCAAGAGAAGGATGTTGA+TGG - chr8_2:48963833-48963852 Msa1252140:CDS 45.0%
GAAATCTGTGGAATCTGCAG+GGG - chr8_2:48963883-48963902 Msa1252140:CDS 45.0%
ATTAGAACTTATGCGGCTGC+TGG - chr8_2:48963926-48963945 Msa1252140:CDS 45.0%
AGATTCCCTGAAGTTGCTTG+AGG - chr8_2:48964006-48964025 Msa1252140:five_prime_UTR 45.0%
CGCTTACGAAGCTGAGACAA+CGG - chr8_2:48960248-48960267 Msa1252140:CDS 50.0%
AATCCCAAACCCACTTGGGT+TGG - chr8_2:48961093-48961112 Msa1252140:CDS 50.0%
! AAGCCAACCCAAGTGGGTTT+GGG + chr8_2:48961099-48961118 None:intergenic 50.0%
AGTACCAAGCCAACCCAAGT+GGG + chr8_2:48961105-48961124 None:intergenic 50.0%
! ATTCTCCCCGGTGCCAATTT+CGG - chr8_2:48961149-48961168 Msa1252140:CDS 50.0%
CGGGATAACCCAGTTACCTA+TGG + chr8_2:48961520-48961539 None:intergenic 50.0%
GAAGGGGATGTAAAACACGC+GGG + chr8_2:48961539-48961558 None:intergenic 50.0%
GGTTCTGTCGACACTCCATA+TGG - chr8_2:48961575-48961594 Msa1252140:intron 50.0%
CTGTCGACACTCCATATGGA+TGG - chr8_2:48961579-48961598 Msa1252140:intron 50.0%
GACTTTCAACCAAACCGCTC+CGG - chr8_2:48961602-48961621 Msa1252140:intron 50.0%
GATCTTGAGGAAAGCAGACG+GGG - chr8_2:48961655-48961674 Msa1252140:intron 50.0%
! TCTTATTGGATGCACTGGCC+AGG - chr8_2:48961706-48961725 Msa1252140:intron 50.0%
CACTGCCAGTAGACTGAATC+AGG - chr8_2:48961749-48961768 Msa1252140:intron 50.0%
ACAGTCAGCTCTCTTACAGC+CGG - chr8_2:48961775-48961794 Msa1252140:intron 50.0%
ACTTGGCAAGTAAGCCCAGA+AGG - chr8_2:48961843-48961862 Msa1252140:intron 50.0%
CAGCTACGACTTCTTCCTTC+TGG + chr8_2:48961861-48961880 None:intergenic 50.0%
ACGCGGATTCAATAGCAGCT+GGG + chr8_2:48962021-48962040 None:intergenic 50.0%
TACGCGGATTCAATAGCAGC+TGG + chr8_2:48962022-48962041 None:intergenic 50.0%
GCTGCTATTGAATCCGCGTA+AGG - chr8_2:48962022-48962041 Msa1252140:intron 50.0%
TTCTCACCTGGAGTGACTGA+AGG + chr8_2:48962120-48962139 None:intergenic 50.0%
GTCACTCCAGGTGAGAAGTT+CGG - chr8_2:48962123-48962142 Msa1252140:intron 50.0%
! GTTTGATAGTTCCTGCTGCG+TGG - chr8_2:48962194-48962213 Msa1252140:intron 50.0%
AAAACAGACAACCACGCAGC+AGG + chr8_2:48962208-48962227 None:intergenic 50.0%
! GCTGCGTGGTTGTCTGTTTT+TGG - chr8_2:48962208-48962227 Msa1252140:intron 50.0%
ACGGACGAATCACTGGAGAT+TGG - chr8_2:48963239-48963258 Msa1252140:intron 50.0%
! GAAGGCAGAAGGTGCACTTA+AGG - chr8_2:48963312-48963331 Msa1252140:intron 50.0%
TATAGGGTCTGGCGTTCTCT+AGG - chr8_2:48963424-48963443 Msa1252140:intron 50.0%
! GGAAACACTTTTCTGCTCCC+GGG + chr8_2:48963520-48963539 None:intergenic 50.0%
! CGGAAACACTTTTCTGCTCC+CGG + chr8_2:48963521-48963540 None:intergenic 50.0%
GTAGAGGGAACGGTGAAAAG+TGG - chr8_2:48963768-48963787 Msa1252140:CDS 50.0%
! GAAGCACTACGAGCAAGAGA+AGG - chr8_2:48963823-48963842 Msa1252140:CDS 50.0%
GTTGCTTGAGGCTATATCCG+AGG - chr8_2:48964018-48964037 Msa1252140:five_prime_UTR 50.0%
CACTAAGGGCCCTTCTGGAT+TGG + chr8_2:48960717-48960736 None:intergenic 55.0%
CAACTCACTAAGGGCCCTTC+TGG + chr8_2:48960722-48960741 None:intergenic 55.0%
! CAAGCCAACCCAAGTGGGTT+TGG + chr8_2:48961100-48961119 None:intergenic 55.0%
!! CAAACCCACTTGGGTTGGCT+TGG - chr8_2:48961098-48961117 Msa1252140:CDS 55.0%
GAGTACCAAGCCAACCCAAG+TGG + chr8_2:48961106-48961125 None:intergenic 55.0%
GCTTGGTACTCCTCCTCTCA+AGG - chr8_2:48961115-48961134 Msa1252140:CDS 55.0%
ATCGCACTCGAGACCTTGAG+AGG + chr8_2:48961131-48961150 None:intergenic 55.0%
TAGCCCACCGAAATTGGCAC+CGG + chr8_2:48961159-48961178 None:intergenic 55.0%
TTTCAACCAAACCGCTCCGG+TGG - chr8_2:48961605-48961624 Msa1252140:intron 55.0%
GGCCAGGCTATCTCATAGTC+TGG - chr8_2:48961722-48961741 Msa1252140:intron 55.0%
CTAAGAAGACGCCCACGTAG+CGG + chr8_2:48961887-48961906 None:intergenic 55.0%
CTCATCGGCATCTCCTTACG+CGG + chr8_2:48962038-48962057 None:intergenic 55.0%
GCGTAAGGAGATGCCGATGA+GGG - chr8_2:48962037-48962056 Msa1252140:intron 55.0%
GCTTAGCCGAACTTCTCACC+TGG + chr8_2:48962132-48962151 None:intergenic 55.0%
GCCGTGCTAGTGTGGTTATG+TGG - chr8_2:48962150-48962169 Msa1252140:intron 55.0%
AAGAGGGACGGACGAATCAC+TGG - chr8_2:48963232-48963251 Msa1252140:intron 55.0%
! AACTAAAGGAGCGTGCTCGG+AGG - chr8_2:48963636-48963655 Msa1252140:intron 55.0%
TGTGGAATCTGCAGGGGAAG+AGG - chr8_2:48963889-48963908 Msa1252140:CDS 55.0%
GAACTTATGCGGCTGCTGGT+AGG - chr8_2:48963930-48963949 Msa1252140:CDS 55.0%
GCACTCGAGACCTTGAGAGG+AGG + chr8_2:48961128-48961147 None:intergenic 60.0%
GTCTCGAGTGCGATTCTCCC+CGG - chr8_2:48961137-48961156 Msa1252140:CDS 60.0%
! TCCCCGGTGCCAATTTCGGT+GGG - chr8_2:48961153-48961172 Msa1252140:CDS 60.0%
AGCCCACCGAAATTGGCACC+GGG + chr8_2:48961158-48961177 None:intergenic 60.0%
! TAGTGGGTGGGGAGAAGCGT+AGG - chr8_2:48961487-48961506 Msa1252140:intron 60.0%
ACCAAACCGCTCCGGTGGAA+CGG - chr8_2:48961610-48961629 Msa1252140:intron 60.0%
TCGTAGCTGCTACCGCTACG+TGG - chr8_2:48961872-48961891 Msa1252140:intron 60.0%
CGTAGCTGCTACCGCTACGT+GGG - chr8_2:48961873-48961892 Msa1252140:intron 60.0%
CGCGTAAGGAGATGCCGATG+AGG - chr8_2:48962036-48962055 Msa1252140:intron 60.0%
TCGGCTAAGCCGTGCTAGTG+TGG - chr8_2:48962142-48962161 Msa1252140:intron 60.0%
GGGTCTGGCGTTCTCTAGGT+TGG - chr8_2:48963428-48963447 Msa1252140:intron 60.0%
! TAAAGGAGCGTGCTCGGAGG+AGG - chr8_2:48963639-48963658 Msa1252140:intron 60.0%
! AAAGGAGCGTGCTCGGAGGA+GGG - chr8_2:48963640-48963659 Msa1252140:intron 60.0%
! CTCCCCGGTGCCAATTTCGG+TGG - chr8_2:48961152-48961171 Msa1252140:CDS 65.0%
GCCCACCGAAATTGGCACCG+GGG + chr8_2:48961157-48961176 None:intergenic 65.0%
GATGAGCCGTTCCACCGGAG+CGG + chr8_2:48961619-48961638 None:intergenic 65.0%
! AAGGAGCGTGCTCGGAGGAG+GGG - chr8_2:48963641-48963660 Msa1252140:intron 65.0%
GCCGTTCCACCGGAGCGGTT+TGG + chr8_2:48961614-48961633 None:intergenic 70.0%
! AGGAGCGTGCTCGGAGGAGG+GGG - chr8_2:48963642-48963661 Msa1252140:intron 70.0%
GGAGCGTGCTCGGAGGAGGG+GGG - chr8_2:48963643-48963662 Msa1252140:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 48959980 48964045 48959980 ID=Msa1252140;Name=Msa1252140
chr8_2 mRNA 48959980 48964045 48959980 ID=Msa1252140-mRNA-1;Parent=Msa1252140;Name=Msa1252140-mRNA-1;_AED=0.11;_eAED=0.11;_QI=87|0.33|0.25|1|0.66|1|4|0|406
chr8_2 exon 48959980 48960416 48959980 ID=Msa1252140-mRNA-1:exon:14760;Parent=Msa1252140-mRNA-1
chr8_2 exon 48960580 48960936 48960580 ID=Msa1252140-mRNA-1:exon:14759;Parent=Msa1252140-mRNA-1
chr8_2 exon 48961020 48961218 48961020 ID=Msa1252140-mRNA-1:exon:14758;Parent=Msa1252140-mRNA-1
chr8_2 exon 48963731 48964045 48963731 ID=Msa1252140-mRNA-1:exon:14757;Parent=Msa1252140-mRNA-1
chr8_2 five_prime_UTR 48963959 48964045 48963959 ID=Msa1252140-mRNA-1:five_prime_utr;Parent=Msa1252140-mRNA-1
chr8_2 CDS 48963731 48963958 48963731 ID=Msa1252140-mRNA-1:cds;Parent=Msa1252140-mRNA-1
chr8_2 CDS 48961020 48961218 48961020 ID=Msa1252140-mRNA-1:cds;Parent=Msa1252140-mRNA-1
chr8_2 CDS 48960580 48960936 48960580 ID=Msa1252140-mRNA-1:cds;Parent=Msa1252140-mRNA-1
chr8_2 CDS 48959980 48960416 48959980 ID=Msa1252140-mRNA-1:cds;Parent=Msa1252140-mRNA-1
Gene Sequence

>Msa1252140

ATGTCTCTGATGCAACGTTACGGAAAATGCAAAAGCGTTGTGAAACGATCCAAAAAGCACTTAGACGAAGCGCTTTACTTGAAACTCTTCAAAGACGGTGGTTCTGAACTTAACGTTCGTCAACAACTTAATCAGTTTATTAAGAGTGGGAAGCGCGTTTATAAATGGGAAGTTGGTGACACGCTTACGAAGCTGAGACAACGGAAATTATATCAACCTGCTCTTAAGTTATCAGAAACAACGGCCAAGAGGAATATGATAAAGACTGTCAGTGACCAAGCTATACATATTGATTTGGATGCAAAAGCTAGAGGTATTGTTGCTGCTGAAAAATATTTATCGATCTCCCCGAGTCTGAAAAATCATCTGTGCTATGGTGCACTTCTCAACTGCTACTGCAAGGAGTTGATGACTACTAAAGCTGAAGGTCAACCAGAAAAGATTCCGTCCATCATGCAAGAAATGAAAGCTAGCAATATCATGCCGGATTCTTACACGTATAATGTATGGATGAGAGCTCTTGCTGCAGTTAATGATATTTCCGGTGTTGAAAGGGTTATTGATGAGATGAAGAGGGACGGACGAATCACTGGAGATTGGACAACATATAGCAACCTTGCATCTATTTATGTTGATGCTAACTTGTTTGAGAAGGCAGAAGGTGCACTTAAGGAATTGGAAAAGAGGAATGGTTACAAAGATCTTTCTGCTTACCAGTTTCTAATTACATTGTATGGGAAAATAGGCAAAGTATACGAGGTTTATAGGGTCTGGCGTTCTCTAGAATTAGATATGCTGGAGAAGGCTGAAGAACTAAAGGAGCGTGCTCGGAGGAGGGGGGCCAAGCCTAATGCAAAAACTTGGGAAATATTTTTGGATTACCATTTGCGAAATGCAGATTTTAAGTTGGCAATGGATTGTTTATCGGAAGCAATCTCAATTGGTAGAGGGAACGGTGAAAAGTGGGTTCCATCATCTGAGACAATAGGTACTATGATGAAGCACTACGAGCAAGAGAAGGATGTTGATGGTGCAGAAGAATTCATCGAAATCTTGAAGAAATCTGTGGAATCTGCAGGGGAAGAGGTGTTTGAATCATTGATTAGAACTTATGCGGCTGCTGGTAGGACAAGTGCTGCTATGCAACGACGATTGAAGATGGAGAATGTGAGTGTGAATGAAGATTCCCTGAAGTTGCTTGAGGCTATATCCGAGGAGTGA

Protein sequence

>Msa1252140

MSLMQRYGKCKSVVKRSKKHLDEALYLKLFKDGGSELNVRQQLNQFIKSGKRVYKWEVGDTLTKLRQRKLYQPALKLSETTAKRNMIKTVSDQAIHIDLDAKARGIVAAEKYLSISPSLKNHLCYGALLNCYCKELMTTKAEGQPEKIPSIMQEMKASNIMPDSYTYNVWMRALAAVNDISGVERVIDEMKRDGRITGDWTTYSNLASIYVDANLFEKAEGALKELEKRNGYKDLSAYQFLITLYGKIGKVYEVYRVWRSLELDMLEKAEELKERARRRGAKPNAKTWEIFLDYHLRNADFKLAMDCLSEAISIGRGNGEKWVPSSETIGTMMKHYEQEKDVDGAEEFIEILKKSVESAGEEVFESLIRTYAAAGRTSAAMQRRLKMENVSVNEDSLKLLEAISEE*