Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0353190 | PNY14955.1 | 77.064 | 109 | 15 | 2 | 20 | 128 | 27 | 125 | 8.75e-47 | 167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0353190 | sp|Q9SFU0|SC24A_ARATH | 63.063 | 111 | 31 | 2 | 20 | 130 | 590 | 690 | 3.13e-39 | 143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0353190 | A0A2K3PI82 | 77.064 | 109 | 15 | 2 | 20 | 128 | 27 | 125 | 4.18e-47 | 167 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0112750 | Msa0353190 | 0.806262 | 8.959434e-50 | -8.615850e-47 |
| Msa0145250 | Msa0353190 | 0.800351 | 1.501152e-48 | -8.615850e-47 |
| Msa0145750 | Msa0353190 | 0.811427 | 7.040858e-51 | -8.615850e-47 |
| Msa0153910 | Msa0353190 | 0.839172 | 1.857873e-57 | -8.615850e-47 |
| Msa0157810 | Msa0353190 | 0.803713 | 3.057432e-49 | -8.615850e-47 |
| Msa0203500 | Msa0353190 | 0.813711 | 2.228707e-51 | -8.615850e-47 |
| Msa0231000 | Msa0353190 | 0.810973 | 8.830936e-51 | -8.615850e-47 |
| Msa0233300 | Msa0353190 | 0.819391 | 1.190436e-52 | -8.615850e-47 |
| Msa0311630 | Msa0353190 | 0.813936 | 1.988982e-51 | -8.615850e-47 |
| Msa0324150 | Msa0353190 | 0.815158 | 1.066813e-51 | -8.615850e-47 |
| Msa0326200 | Msa0353190 | 0.962032 | 2.139549e-120 | -8.615850e-47 |
| Msa0353190 | Msa0353690 | 0.945778 | 1.612936e-104 | -8.615850e-47 |
| Msa0353190 | Msa0360900 | 0.889906 | 1.591775e-73 | -8.615850e-47 |
| Msa0353190 | Msa0363300 | 0.818180 | 2.242849e-52 | -8.615850e-47 |
| Msa0353190 | Msa0366580 | 0.805108 | 1.565328e-49 | -8.615850e-47 |
| Msa0353190 | Msa0384800 | 0.801733 | 7.835060e-49 | -8.615850e-47 |
| Msa0353190 | Msa0392530 | 0.804882 | 1.744922e-49 | -8.615850e-47 |
| Msa0353190 | Msa0399140 | 0.801685 | 8.012023e-49 | -8.615850e-47 |
| Msa0353190 | Msa0399300 | 0.803771 | 2.973594e-49 | -8.615850e-47 |
| Msa0353190 | Msa0406120 | 0.818090 | 2.349966e-52 | -8.615850e-47 |
| Msa0353190 | Msa0431500 | 0.907195 | 6.586677e-81 | -8.615850e-47 |
| Msa0353190 | Msa0431690 | 0.822862 | 1.887471e-53 | -8.615850e-47 |
| Msa0353190 | Msa0432290 | 0.809160 | 2.170672e-50 | -8.615850e-47 |
| Msa0353190 | Msa0437990 | 0.812728 | 3.663589e-51 | -8.615850e-47 |
| Msa0353190 | Msa0452620 | 0.843429 | 1.408541e-58 | -8.615850e-47 |
| Msa0353190 | Msa0456200 | 0.967322 | 4.061932e-127 | -8.615850e-47 |
| Msa0353190 | Msa0482620 | 0.819490 | 1.130111e-52 | -8.615850e-47 |
| Msa0353190 | Msa0483650 | 0.800833 | 1.197184e-48 | -8.615850e-47 |
| Msa0353190 | Msa0502270 | 0.801954 | 7.055194e-49 | -8.615850e-47 |
| Msa0353190 | Msa0512900 | 0.821743 | 3.432391e-53 | -8.615850e-47 |
| Msa0353190 | Msa0533430 | 0.810812 | 9.570452e-51 | -8.615850e-47 |
| Msa0353190 | Msa0546710 | 0.800753 | 1.242802e-48 | -8.615850e-47 |
| Msa0353190 | Msa0548060 | 0.817489 | 3.210769e-52 | -8.615850e-47 |
| Msa0353190 | Msa0558640 | 0.805140 | 1.541448e-49 | -8.615850e-47 |
| Msa0353190 | Msa0562510 | 0.806746 | 7.082489e-50 | -8.615850e-47 |
| Msa0353190 | Msa0627410 | 0.974276 | 7.162556e-138 | -8.615850e-47 |
| Msa0353190 | Msa0636170 | 0.802600 | 5.193885e-49 | -8.615850e-47 |
| Msa0353190 | Msa0639460 | 0.807917 | 3.998078e-50 | -8.615850e-47 |
| Msa0353190 | Msa0657970 | 0.820456 | 6.795667e-53 | -8.615850e-47 |
| Msa0353190 | Msa0661870 | 0.825251 | 5.189196e-54 | -8.615850e-47 |
| Msa0353190 | Msa0678930 | 0.815389 | 9.478303e-52 | -8.615850e-47 |
| Msa0353190 | Msa0682360 | 0.806540 | 7.829701e-50 | -8.615850e-47 |
| Msa0353190 | Msa0691880 | 0.838634 | 2.559411e-57 | -8.615850e-47 |
| Msa0353190 | Msa0697060 | 0.811030 | 8.582164e-51 | -8.615850e-47 |
| Msa0353190 | Msa0726140 | 0.808440 | 3.094713e-50 | -8.615850e-47 |
| Msa0353190 | Msa0733290 | 0.800541 | 1.373428e-48 | -8.615850e-47 |
| Msa0353190 | Msa0741570 | 0.856053 | 4.173081e-62 | -8.615850e-47 |
| Msa0353190 | Msa0745060 | 0.824497 | 7.819414e-54 | -8.615850e-47 |
| Msa0353190 | Msa0762360 | 0.821087 | 4.864928e-53 | -8.615850e-47 |
| Msa0353190 | Msa0766630 | 0.803996 | 2.669849e-49 | -8.615850e-47 |
| Msa0353190 | Msa0791600 | 0.815862 | 7.436271e-52 | -8.615850e-47 |
| Msa0353190 | Msa0811080 | 0.806860 | 6.701294e-50 | -8.615850e-47 |
| Msa0353190 | Msa0815320 | 0.802203 | 6.271799e-49 | -8.615850e-47 |
| Msa0353190 | Msa0822650 | 0.829332 | 5.461940e-55 | -8.615850e-47 |
| Msa0353190 | Msa0825860 | 0.818797 | 1.624731e-52 | -8.615850e-47 |
| Msa0353190 | Msa0831970 | 0.806921 | 6.503678e-50 | -8.615850e-47 |
| Msa0353190 | Msa0846330 | 0.805916 | 1.059486e-49 | -8.615850e-47 |
| Msa0353190 | Msa0846350 | 0.800593 | 1.339785e-48 | -8.615850e-47 |
| Msa0353190 | Msa0865320 | 0.800355 | 1.498250e-48 | -8.615850e-47 |
| Msa0353190 | Msa0885280 | 0.848064 | 7.777209e-60 | -8.615850e-47 |
| Msa0353190 | Msa0885290 | 0.874597 | 5.963429e-68 | -8.615850e-47 |
| Msa0353190 | Msa0886750 | 0.817319 | 3.508024e-52 | -8.615850e-47 |
| Msa0353190 | Msa0887990 | 0.871538 | 6.330869e-67 | -8.615850e-47 |
| Msa0353190 | Msa0909120 | 0.813138 | 2.978126e-51 | -8.615850e-47 |
| Msa0353190 | Msa0909140 | 0.808159 | 3.551017e-50 | -8.615850e-47 |
| Msa0353190 | Msa0917810 | 0.802819 | 4.680730e-49 | -8.615850e-47 |
| Msa0353190 | Msa0922720 | 0.815332 | 9.761223e-52 | -8.615850e-47 |
| Msa0353190 | Msa0965750 | 0.835066 | 2.082654e-56 | -8.615850e-47 |
| Msa0353190 | Msa1006250 | 0.805011 | 1.640412e-49 | -8.615850e-47 |
| Msa0353190 | Msa1024240 | 0.822037 | 2.934551e-53 | -8.615850e-47 |
| Msa0353190 | Msa1077870 | 0.823473 | 1.359021e-53 | -8.615850e-47 |
| Msa0353190 | Msa1079180 | 0.804134 | 2.499074e-49 | -8.615850e-47 |
| Msa0353190 | Msa1084240 | 0.815460 | 9.138936e-52 | -8.615850e-47 |
| Msa0353190 | Msa1100980 | 0.823959 | 1.045781e-53 | -8.615850e-47 |
| Msa0353190 | Msa1135740 | 0.815834 | 7.543387e-52 | -8.615850e-47 |
| Msa0353190 | Msa1136090 | 0.833149 | 6.294158e-56 | -8.615850e-47 |
| Msa0353190 | Msa1146110 | 0.800474 | 1.416805e-48 | -8.615850e-47 |
| Msa0353190 | Msa1148020 | 0.823459 | 1.369269e-53 | -8.615850e-47 |
| Msa0353190 | Msa1160670 | 0.835758 | 1.392659e-56 | -8.615850e-47 |
| Msa0353190 | Msa1160690 | 0.801663 | 8.095912e-49 | -8.615850e-47 |
| Msa0353190 | Msa1173920 | 0.819157 | 1.345710e-52 | -8.615850e-47 |
| Msa0353190 | Msa1178720 | 0.915121 | 8.576082e-85 | -8.615850e-47 |
| Msa0353190 | Msa1187940 | 0.857159 | 1.973732e-62 | -8.615850e-47 |
| Msa0353190 | Msa1187950 | 0.820846 | 5.528615e-53 | -8.615850e-47 |
| Msa0353190 | Msa1260100 | 0.825179 | 5.399037e-54 | -8.615850e-47 |
| Msa0353190 | Msa1269670 | 0.807714 | 4.417108e-50 | -8.615850e-47 |
| Msa0353190 | Msa1270240 | 0.804700 | 1.904483e-49 | -8.615850e-47 |
| Msa0353190 | Msa1270270 | 0.812581 | 3.944113e-51 | -8.615850e-47 |
| Msa0353190 | Msa1297210 | 0.851749 | 7.246591e-61 | -8.615850e-47 |
| Msa0353190 | Msa1324780 | 0.810011 | 1.424863e-50 | -8.615850e-47 |
| Msa0353190 | Msa1397610 | 0.866062 | 3.750369e-65 | -8.615850e-47 |
| Msa0353190 | Msa1411020 | 0.807785 | 4.265967e-50 | -8.615850e-47 |
| Msa0353190 | Msa1415310 | 0.803171 | 3.959526e-49 | -8.615850e-47 |
| Msa0353190 | Msa1420140 | 0.805465 | 1.317574e-49 | -8.615850e-47 |
| Msa0353190 | Msa1423390 | 0.800440 | 1.439872e-48 | -8.615850e-47 |
| Msa0353190 | Msa1424290 | 0.808154 | 3.561020e-50 | -8.615850e-47 |
| Msa0353190 | Msa1434350 | 0.807875 | 4.082988e-50 | -8.615850e-47 |
| Msa0353190 | Msa1438250 | 0.842883 | 1.969180e-58 | -8.615850e-47 |
| Msa0353190 | Msa1439320 | 0.807163 | 5.781827e-50 | -8.615850e-47 |
| Msa0353190 | Msa1440370 | 0.800446 | 1.435845e-48 | -8.615850e-47 |
| Msa0353190 | Msa1440810 | 0.801627 | 8.237159e-49 | -8.615850e-47 |
| Msa0353190 | Msa1453720 | 0.804811 | 1.805763e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0353190 | MtrunA17_Chr7g0271481 | 79.208 | 101 | 13 | 1 | 38 | 130 | 572 | 672 | 1.07e-48 | 167 |
| Msa0353190 | MtrunA17_Chr1g0210851 | 35.366 | 82 | 53 | 0 | 47 | 128 | 686 | 767 | 4.46e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0353190 | AT3G07100.1 | 63.063 | 111 | 31 | 2 | 20 | 130 | 590 | 690 | 3.19e-40 | 143 |
Find 24 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCATCTGAGAAATGTTATT+TGG | 0.215048 | 3_1:-22984054 | None:intergenic |
| TTCAATCTCTTGAAGACATT+TGG | 0.286454 | 3_1:-22984135 | None:intergenic |
| TGCTCATAAAATGGATCTTC+AGG | 0.293277 | 3_1:-22985803 | None:intergenic |
| AGAAATTGAGTCATGAATTA+AGG | 0.308061 | 3_1:+22986369 | Msa0353190:CDS |
| CATACACATTTACTGAGATT+TGG | 0.310882 | 3_1:-22985850 | None:intergenic |
| GCAGCTATCTGCTCATAAAA+TGG | 0.312200 | 3_1:-22985812 | None:intergenic |
| ATTATGGAATAAATGGTTCC+TGG | 0.392140 | 3_1:+22984027 | None:intergenic |
| TCCTGTCTGTGTAGGAACTC+TGG | 0.429146 | 3_1:+22986286 | Msa0353190:intron |
| TCTCCCCATGAGTAGCTGAT+TGG | 0.442822 | 3_1:-22986349 | None:intergenic |
| TGAGTAGCTGATTGGAAAGC+TGG | 0.469035 | 3_1:-22986341 | None:intergenic |
| TTGATGACAAGCTTGCACTA+AGG | 0.501378 | 3_1:+22984088 | Msa0353190:CDS |
| GAGAGACTGCATGGGAAGCA+TGG | 0.524555 | 3_1:+22986405 | Msa0353190:CDS |
| TGATGACAAGCTTGCACTAA+GGG | 0.525975 | 3_1:+22984089 | Msa0353190:CDS |
| GCTTTCCAATCAGCTACTCA+TGG | 0.528786 | 3_1:+22986344 | Msa0353190:CDS |
| CTTTCCAATCAGCTACTCAT+GGG | 0.542155 | 3_1:+22986345 | Msa0353190:CDS |
| TACACTGACATAGTCTCCTT+AGG | 0.542906 | 3_1:+22985887 | Msa0353190:CDS |
| ACCTCACAAGAGAGACTGCA+TGG | 0.560035 | 3_1:+22986396 | Msa0353190:CDS |
| ACTCTGGCAAAGTACACTGC+TGG | 0.591069 | 3_1:+22986302 | Msa0353190:CDS |
| CCCATGCAGTCTCTCTTGTG+AGG | 0.598716 | 3_1:-22986397 | None:intergenic |
| TTTGGGACAGATAAAGAACA+TGG | 0.635621 | 3_1:+22985770 | Msa0353190:intron |
| AAGAGATTGAAAATGAAGAG+TGG | 0.650771 | 3_1:+22984147 | Msa0353190:CDS |
| GATGACAAGCTTGCACTAAG+GGG | 0.673387 | 3_1:+22984090 | Msa0353190:CDS |
| TTTCCAATCAGCTACTCATG+GGG | 0.686768 | 3_1:+22986346 | Msa0353190:CDS |
| CCTCACAAGAGAGACTGCAT+GGG | 0.693489 | 3_1:+22986397 | Msa0353190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTTCTTTCAAAATT+TGG | - | chr3_1:22984198-22984217 | None:intergenic | 10.0% |
| !!! | TTTAATTTTCTTTCAAAATT+TGG | - | chr3_1:22984198-22984217 | None:intergenic | 10.0% |
| !!! | ATAAAATTTTCTATTATAGG+CGG | + | chr3_1:22984236-22984255 | Msa0353190:intron | 15.0% |
| !! | AACCAACATAAAAAAATTAT+AGG | + | chr3_1:22984264-22984283 | Msa0353190:intron | 15.0% |
| !!! | TTCTAATTCAACAATTATTT+TGG | - | chr3_1:22984853-22984872 | None:intergenic | 15.0% |
| !!! | ATGAAGAAATTAATCATTTT+AGG | + | chr3_1:22984880-22984899 | Msa0353190:intron | 15.0% |
| !!! | TGAAGAAATTAATCATTTTA+GGG | + | chr3_1:22984881-22984900 | Msa0353190:intron | 15.0% |
| !!! | ATAAAATTTTCTATTATAGG+CGG | + | chr3_1:22984236-22984255 | Msa0353190:intron | 15.0% |
| !! | AACCAACATAAAAAAATTAT+AGG | + | chr3_1:22984264-22984283 | Msa0353190:intron | 15.0% |
| !!! | TTCTAATTCAACAATTATTT+TGG | - | chr3_1:22984853-22984872 | None:intergenic | 15.0% |
| !!! | ATGAAGAAATTAATCATTTT+AGG | + | chr3_1:22984880-22984899 | Msa0353190:intron | 15.0% |
| !!! | TGAAGAAATTAATCATTTTA+GGG | + | chr3_1:22984881-22984900 | Msa0353190:intron | 15.0% |
| !!! | CACCTATAATTTTTTTATGT+TGG | - | chr3_1:22984269-22984288 | None:intergenic | 20.0% |
| !! | CAACATAAAAAAATTATAGG+TGG | + | chr3_1:22984267-22984286 | Msa0353190:intron | 20.0% |
| !!! | GTATTTTAATGTTTTCGTTT+CGG | - | chr3_1:22984329-22984348 | None:intergenic | 20.0% |
| !!! | AGATTTTCTTGCTAAAAAAA+AGG | + | chr3_1:22984416-22984435 | Msa0353190:intron | 20.0% |
| !!! | GATTTTCTTGCTAAAAAAAA+GGG | + | chr3_1:22984417-22984436 | Msa0353190:intron | 20.0% |
| !! | TTTATCTCAAATCTTGTATT+TGG | + | chr3_1:22984776-22984795 | Msa0353190:intron | 20.0% |
| !!! | CAAATCTTTTCATTAAGAAT+TGG | - | chr3_1:22985273-22985292 | None:intergenic | 20.0% |
| !! | ATTCTTAATGAAAAGATTTG+TGG | + | chr3_1:22985273-22985292 | Msa0353190:intron | 20.0% |
| !! | TTAAAGTAATTAGAAATCCA+TGG | + | chr3_1:22985393-22985412 | Msa0353190:intron | 20.0% |
| !!! | ATATTTTTGTTGTATTAGTG+TGG | + | chr3_1:22985561-22985580 | Msa0353190:intron | 20.0% |
| !! | TAACAGGTTTAAAAATAGAA+TGG | - | chr3_1:22985951-22985970 | None:intergenic | 20.0% |
| !!! | CACCTATAATTTTTTTATGT+TGG | - | chr3_1:22984269-22984288 | None:intergenic | 20.0% |
| !! | CAACATAAAAAAATTATAGG+TGG | + | chr3_1:22984267-22984286 | Msa0353190:intron | 20.0% |
| !!! | GTATTTTAATGTTTTCGTTT+CGG | - | chr3_1:22984329-22984348 | None:intergenic | 20.0% |
| !!! | AGATTTTCTTGCTAAAAAAA+AGG | + | chr3_1:22984416-22984435 | Msa0353190:intron | 20.0% |
| !!! | GATTTTCTTGCTAAAAAAAA+GGG | + | chr3_1:22984417-22984436 | Msa0353190:intron | 20.0% |
| !! | TTTATCTCAAATCTTGTATT+TGG | + | chr3_1:22984776-22984795 | Msa0353190:intron | 20.0% |
| !!! | CAAATCTTTTCATTAAGAAT+TGG | - | chr3_1:22985273-22985292 | None:intergenic | 20.0% |
| !! | ATTCTTAATGAAAAGATTTG+TGG | + | chr3_1:22985273-22985292 | Msa0353190:intron | 20.0% |
| !! | TTAAAGTAATTAGAAATCCA+TGG | + | chr3_1:22985393-22985412 | Msa0353190:intron | 20.0% |
| !!! | ATATTTTTGTTGTATTAGTG+TGG | + | chr3_1:22985561-22985580 | Msa0353190:intron | 20.0% |
| !! | TAACAGGTTTAAAAATAGAA+TGG | - | chr3_1:22985951-22985970 | None:intergenic | 20.0% |
| !!! | TTTCTTTCAAAATTTGGTGT+TGG | - | chr3_1:22984192-22984211 | None:intergenic | 25.0% |
| !!! | TACTGATTTAGTGAGAATTT+TGG | + | chr3_1:22984909-22984928 | Msa0353190:intron | 25.0% |
| !!! | ACTGATTTAGTGAGAATTTT+GGG | + | chr3_1:22984910-22984929 | Msa0353190:intron | 25.0% |
| ! | ATTTGTCAGTAATTGCAAAT+GGG | + | chr3_1:22985066-22985085 | Msa0353190:intron | 25.0% |
| !!! | TAATTTGTGTTGGTTAAGTT+AGG | + | chr3_1:22985099-22985118 | Msa0353190:intron | 25.0% |
| ! | GTCACATTTATGTCAAAAAA+TGG | + | chr3_1:22985295-22985314 | Msa0353190:intron | 25.0% |
| !!! | GAAATTTTGGAAAAAATGTG+TGG | + | chr3_1:22985326-22985345 | Msa0353190:intron | 25.0% |
| ! | TTGACTTTAATAAGATGCTT+TGG | + | chr3_1:22985456-22985475 | Msa0353190:intron | 25.0% |
| ! | AAAACTAGTCATTTGTTCAT+TGG | + | chr3_1:22985538-22985557 | Msa0353190:intron | 25.0% |
| ! | GTGATAAAATTCATATGCAA+TGG | - | chr3_1:22985616-22985635 | None:intergenic | 25.0% |
| ! | ATGTTCTGATATTTGTGTAA+TGG | + | chr3_1:22985662-22985681 | Msa0353190:intron | 25.0% |
| ! | AAGTTCAACACACAAAAATA+TGG | - | chr3_1:22985730-22985749 | None:intergenic | 25.0% |
| !!! | AGTGTATTAGTGTATTGATT+TGG | + | chr3_1:22985752-22985771 | Msa0353190:intron | 25.0% |
| !!! | GTGTATTAGTGTATTGATTT+GGG | + | chr3_1:22985753-22985772 | Msa0353190:intron | 25.0% |
| ! | ACGAAATACATAGAAATTGA+AGG | - | chr3_1:22985924-22985943 | None:intergenic | 25.0% |
| ! | ATCAATTAATCAAGAGTAAC+AGG | - | chr3_1:22985967-22985986 | None:intergenic | 25.0% |
| ! | AGAAATTGAGTCATGAATTA+AGG | + | chr3_1:22986369-22986388 | Msa0353190:CDS | 25.0% |
| !!! | TTTCTTTCAAAATTTGGTGT+TGG | - | chr3_1:22984192-22984211 | None:intergenic | 25.0% |
| !!! | TACTGATTTAGTGAGAATTT+TGG | + | chr3_1:22984909-22984928 | Msa0353190:intron | 25.0% |
| !!! | ACTGATTTAGTGAGAATTTT+GGG | + | chr3_1:22984910-22984929 | Msa0353190:intron | 25.0% |
| ! | ATTTGTCAGTAATTGCAAAT+GGG | + | chr3_1:22985066-22985085 | Msa0353190:intron | 25.0% |
| !!! | TAATTTGTGTTGGTTAAGTT+AGG | + | chr3_1:22985099-22985118 | Msa0353190:intron | 25.0% |
| ! | GTCACATTTATGTCAAAAAA+TGG | + | chr3_1:22985295-22985314 | Msa0353190:intron | 25.0% |
| !!! | GAAATTTTGGAAAAAATGTG+TGG | + | chr3_1:22985326-22985345 | Msa0353190:intron | 25.0% |
| ! | TTGACTTTAATAAGATGCTT+TGG | + | chr3_1:22985456-22985475 | Msa0353190:intron | 25.0% |
| ! | AAAACTAGTCATTTGTTCAT+TGG | + | chr3_1:22985538-22985557 | Msa0353190:intron | 25.0% |
| ! | GTGATAAAATTCATATGCAA+TGG | - | chr3_1:22985616-22985635 | None:intergenic | 25.0% |
| ! | ATGTTCTGATATTTGTGTAA+TGG | + | chr3_1:22985662-22985681 | Msa0353190:intron | 25.0% |
| ! | AAGTTCAACACACAAAAATA+TGG | - | chr3_1:22985730-22985749 | None:intergenic | 25.0% |
| !!! | AGTGTATTAGTGTATTGATT+TGG | + | chr3_1:22985752-22985771 | Msa0353190:intron | 25.0% |
| !!! | GTGTATTAGTGTATTGATTT+GGG | + | chr3_1:22985753-22985772 | Msa0353190:intron | 25.0% |
| ! | ACGAAATACATAGAAATTGA+AGG | - | chr3_1:22985924-22985943 | None:intergenic | 25.0% |
| ! | ATCAATTAATCAAGAGTAAC+AGG | - | chr3_1:22985967-22985986 | None:intergenic | 25.0% |
| ! | AGAAATTGAGTCATGAATTA+AGG | + | chr3_1:22986369-22986388 | Msa0353190:CDS | 25.0% |
| !!! | GAAATGTTATTTGGTTTTCC+AGG | - | chr3_1:22984048-22984067 | None:intergenic | 30.0% |
| TGCATCTGAGAAATGTTATT+TGG | - | chr3_1:22984057-22984076 | None:intergenic | 30.0% | |
| TTCAATCTCTTGAAGACATT+TGG | - | chr3_1:22984138-22984157 | None:intergenic | 30.0% | |
| AAGAGATTGAAAATGAAGAG+TGG | + | chr3_1:22984147-22984166 | Msa0353190:CDS | 30.0% | |
| !! | TTTCAAAATTTGGTGTTGGT+TGG | - | chr3_1:22984188-22984207 | None:intergenic | 30.0% |
| ! | TTTGGTAGTTTCATGCAATA+AGG | + | chr3_1:22984506-22984525 | Msa0353190:intron | 30.0% |
| ! | TTGGTAGTTTCATGCAATAA+GGG | + | chr3_1:22984507-22984526 | Msa0353190:intron | 30.0% |
| ! | TCAAATCTTGTATTTGGTGA+AGG | + | chr3_1:22984782-22984801 | Msa0353190:intron | 30.0% |
| ! | ACTGTCTAATTGTTGCATTT+TGG | + | chr3_1:22985003-22985022 | Msa0353190:intron | 30.0% |
| CAACGACATAACATCTTAAT+CGG | - | chr3_1:22985036-22985055 | None:intergenic | 30.0% | |
| GATTTGTCAGTAATTGCAAA+TGG | + | chr3_1:22985065-22985084 | Msa0353190:intron | 30.0% | |
| TTTGTCAGTAATTGCAAATG+GGG | + | chr3_1:22985067-22985086 | Msa0353190:intron | 30.0% | |
| !!! | AAGTTAGGTCATGTTTTAGT+TGG | + | chr3_1:22985114-22985133 | Msa0353190:intron | 30.0% |
| !! | AATGGACAGTGTTGAAATTT+TGG | + | chr3_1:22985313-22985332 | Msa0353190:intron | 30.0% |
| AAAATTCATATGCAATGGCA+AGG | - | chr3_1:22985611-22985630 | None:intergenic | 30.0% | |
| !! | GATATTTGTGTAATGGATAG+AGG | + | chr3_1:22985669-22985688 | Msa0353190:intron | 30.0% |
| CATACACATTTACTGAGATT+TGG | - | chr3_1:22985853-22985872 | None:intergenic | 30.0% | |
| GAAGGAAAATAAAACACCTA+AGG | - | chr3_1:22985906-22985925 | None:intergenic | 30.0% | |
| ! | ATTTGATGATTCTTCAGTTG+TGG | + | chr3_1:22985989-22986008 | Msa0353190:intron | 30.0% |
| TAAACTGATACTCTAACTCA+TGG | + | chr3_1:22986070-22986089 | Msa0353190:intron | 30.0% | |
| GGATCTATTTGACTATGAAA+TGG | + | chr3_1:22986091-22986110 | Msa0353190:intron | 30.0% | |
| AAATGCTGACAGAATTACAT+CGG | - | chr3_1:22986200-22986219 | None:intergenic | 30.0% | |
| !!! | GAAATGTTATTTGGTTTTCC+AGG | - | chr3_1:22984048-22984067 | None:intergenic | 30.0% |
| TGCATCTGAGAAATGTTATT+TGG | - | chr3_1:22984057-22984076 | None:intergenic | 30.0% | |
| TTCAATCTCTTGAAGACATT+TGG | - | chr3_1:22984138-22984157 | None:intergenic | 30.0% | |
| AAGAGATTGAAAATGAAGAG+TGG | + | chr3_1:22984147-22984166 | Msa0353190:CDS | 30.0% | |
| !! | TTTCAAAATTTGGTGTTGGT+TGG | - | chr3_1:22984188-22984207 | None:intergenic | 30.0% |
| ! | TTTGGTAGTTTCATGCAATA+AGG | + | chr3_1:22984506-22984525 | Msa0353190:intron | 30.0% |
| ! | TTGGTAGTTTCATGCAATAA+GGG | + | chr3_1:22984507-22984526 | Msa0353190:intron | 30.0% |
| ! | TCAAATCTTGTATTTGGTGA+AGG | + | chr3_1:22984782-22984801 | Msa0353190:intron | 30.0% |
| ! | ACTGTCTAATTGTTGCATTT+TGG | + | chr3_1:22985003-22985022 | Msa0353190:intron | 30.0% |
| CAACGACATAACATCTTAAT+CGG | - | chr3_1:22985036-22985055 | None:intergenic | 30.0% | |
| GATTTGTCAGTAATTGCAAA+TGG | + | chr3_1:22985065-22985084 | Msa0353190:intron | 30.0% | |
| TTTGTCAGTAATTGCAAATG+GGG | + | chr3_1:22985067-22985086 | Msa0353190:intron | 30.0% | |
| !!! | AAGTTAGGTCATGTTTTAGT+TGG | + | chr3_1:22985114-22985133 | Msa0353190:intron | 30.0% |
| !! | AATGGACAGTGTTGAAATTT+TGG | + | chr3_1:22985313-22985332 | Msa0353190:intron | 30.0% |
| AAAATTCATATGCAATGGCA+AGG | - | chr3_1:22985611-22985630 | None:intergenic | 30.0% | |
| !! | GATATTTGTGTAATGGATAG+AGG | + | chr3_1:22985669-22985688 | Msa0353190:intron | 30.0% |
| CATACACATTTACTGAGATT+TGG | - | chr3_1:22985853-22985872 | None:intergenic | 30.0% | |
| GAAGGAAAATAAAACACCTA+AGG | - | chr3_1:22985906-22985925 | None:intergenic | 30.0% | |
| ! | ATTTGATGATTCTTCAGTTG+TGG | + | chr3_1:22985989-22986008 | Msa0353190:intron | 30.0% |
| TAAACTGATACTCTAACTCA+TGG | + | chr3_1:22986070-22986089 | Msa0353190:intron | 30.0% | |
| GGATCTATTTGACTATGAAA+TGG | + | chr3_1:22986091-22986110 | Msa0353190:intron | 30.0% | |
| AAATGCTGACAGAATTACAT+CGG | - | chr3_1:22986200-22986219 | None:intergenic | 30.0% | |
| ! | TAGCAGATTTCAGTTAGTCT+CGG | - | chr3_1:22984351-22984370 | None:intergenic | 35.0% |
| ! | ACAAAGGGGTGTATAGAAAA+GGG | - | chr3_1:22984461-22984480 | None:intergenic | 35.0% |
| ! | TACAAAGGGGTGTATAGAAA+AGG | - | chr3_1:22984462-22984481 | None:intergenic | 35.0% |
| TGGTAGTTTCATGCAATAAG+GGG | + | chr3_1:22984508-22984527 | Msa0353190:intron | 35.0% | |
| GAGATAAACATCACCTTCAA+CGG | - | chr3_1:22984764-22984783 | None:intergenic | 35.0% | |
| ! | GATGGGATGATAATTTGTGT+TGG | + | chr3_1:22985089-22985108 | Msa0353190:intron | 35.0% |
| AAGAGAGACTAAATGATTGG+AGG | - | chr3_1:22985216-22985235 | None:intergenic | 35.0% | |
| CCAAAGAGAGACTAAATGAT+TGG | - | chr3_1:22985219-22985238 | None:intergenic | 35.0% | |
| CCAATCATTTAGTCTCTCTT+TGG | + | chr3_1:22985216-22985235 | Msa0353190:intron | 35.0% | |
| TAACATCACACATTTCACCA+TGG | - | chr3_1:22985413-22985432 | None:intergenic | 35.0% | |
| ! | TTTGGGACAGATAAAGAACA+TGG | + | chr3_1:22985770-22985789 | Msa0353190:intron | 35.0% |
| TGCTCATAAAATGGATCTTC+AGG | - | chr3_1:22985806-22985825 | None:intergenic | 35.0% | |
| AATGCTGACAGAATTACATC+GGG | - | chr3_1:22986199-22986218 | None:intergenic | 35.0% | |
| TGTAATTCTGTCAGCATTTG+CGG | + | chr3_1:22986201-22986220 | Msa0353190:intron | 35.0% | |
| !!! | GTTTTTTTTCCTGTCTGTGT+AGG | + | chr3_1:22986278-22986297 | Msa0353190:intron | 35.0% |
| ! | TAGCAGATTTCAGTTAGTCT+CGG | - | chr3_1:22984351-22984370 | None:intergenic | 35.0% |
| ! | ACAAAGGGGTGTATAGAAAA+GGG | - | chr3_1:22984461-22984480 | None:intergenic | 35.0% |
| ! | TACAAAGGGGTGTATAGAAA+AGG | - | chr3_1:22984462-22984481 | None:intergenic | 35.0% |
| TGGTAGTTTCATGCAATAAG+GGG | + | chr3_1:22984508-22984527 | Msa0353190:intron | 35.0% | |
| GAGATAAACATCACCTTCAA+CGG | - | chr3_1:22984764-22984783 | None:intergenic | 35.0% | |
| ! | GATGGGATGATAATTTGTGT+TGG | + | chr3_1:22985089-22985108 | Msa0353190:intron | 35.0% |
| AAGAGAGACTAAATGATTGG+AGG | - | chr3_1:22985216-22985235 | None:intergenic | 35.0% | |
| CCAAAGAGAGACTAAATGAT+TGG | - | chr3_1:22985219-22985238 | None:intergenic | 35.0% | |
| CCAATCATTTAGTCTCTCTT+TGG | + | chr3_1:22985216-22985235 | Msa0353190:intron | 35.0% | |
| TAACATCACACATTTCACCA+TGG | - | chr3_1:22985413-22985432 | None:intergenic | 35.0% | |
| ! | TTTGGGACAGATAAAGAACA+TGG | + | chr3_1:22985770-22985789 | Msa0353190:intron | 35.0% |
| TGCTCATAAAATGGATCTTC+AGG | - | chr3_1:22985806-22985825 | None:intergenic | 35.0% | |
| AATGCTGACAGAATTACATC+GGG | - | chr3_1:22986199-22986218 | None:intergenic | 35.0% | |
| TGTAATTCTGTCAGCATTTG+CGG | + | chr3_1:22986201-22986220 | Msa0353190:intron | 35.0% | |
| !!! | GTTTTTTTTCCTGTCTGTGT+AGG | + | chr3_1:22986278-22986297 | Msa0353190:intron | 35.0% |
| ! | TTGATGACAAGCTTGCACTA+AGG | + | chr3_1:22984088-22984107 | Msa0353190:CDS | 40.0% |
| TGATGACAAGCTTGCACTAA+GGG | + | chr3_1:22984089-22984108 | Msa0353190:CDS | 40.0% | |
| ! | CAAAGGGGTGTATAGAAAAG+GGG | - | chr3_1:22984460-22984479 | None:intergenic | 40.0% |
| TCATGCAATAAGGGGTAGTT+TGG | + | chr3_1:22984516-22984535 | Msa0353190:intron | 40.0% | |
| !! | AGTTGATGGAGGTGATAGAA+CGG | - | chr3_1:22984644-22984663 | None:intergenic | 40.0% |
| AGGAGTTGTGATTCGATAGT+GGG | - | chr3_1:22984667-22984686 | None:intergenic | 40.0% | |
| AAGGAGTTGTGATTCGATAG+TGG | - | chr3_1:22984668-22984687 | None:intergenic | 40.0% | |
| GAGGAAAACGCAAAAAGAGT+GGG | - | chr3_1:22984720-22984739 | None:intergenic | 40.0% | |
| TCAGTAATTGCAAATGGGGA+TGG | + | chr3_1:22985071-22985090 | Msa0353190:intron | 40.0% | |
| CAGTAATTGCAAATGGGGAT+GGG | + | chr3_1:22985072-22985091 | Msa0353190:intron | 40.0% | |
| GTGGTTACGTCTTTGTTACA+TGG | + | chr3_1:22985345-22985364 | Msa0353190:intron | 40.0% | |
| !! | TAATGGATAGAGGCATTGAG+TGG | + | chr3_1:22985679-22985698 | Msa0353190:intron | 40.0% |
| GCAGCTATCTGCTCATAAAA+TGG | - | chr3_1:22985815-22985834 | None:intergenic | 40.0% | |
| TACACTGACATAGTCTCCTT+AGG | + | chr3_1:22985887-22985906 | Msa0353190:CDS | 40.0% | |
| CATCAGCATGCAAGACTATA+TGG | - | chr3_1:22986235-22986254 | None:intergenic | 40.0% | |
| CTTTCCAATCAGCTACTCAT+GGG | + | chr3_1:22986345-22986364 | Msa0353190:CDS | 40.0% | |
| TTTCCAATCAGCTACTCATG+GGG | + | chr3_1:22986346-22986365 | Msa0353190:CDS | 40.0% | |
| ! | TTGATGACAAGCTTGCACTA+AGG | + | chr3_1:22984088-22984107 | Msa0353190:CDS | 40.0% |
| TGATGACAAGCTTGCACTAA+GGG | + | chr3_1:22984089-22984108 | Msa0353190:CDS | 40.0% | |
| ! | CAAAGGGGTGTATAGAAAAG+GGG | - | chr3_1:22984460-22984479 | None:intergenic | 40.0% |
| TCATGCAATAAGGGGTAGTT+TGG | + | chr3_1:22984516-22984535 | Msa0353190:intron | 40.0% | |
| !! | AGTTGATGGAGGTGATAGAA+CGG | - | chr3_1:22984644-22984663 | None:intergenic | 40.0% |
| AGGAGTTGTGATTCGATAGT+GGG | - | chr3_1:22984667-22984686 | None:intergenic | 40.0% | |
| AAGGAGTTGTGATTCGATAG+TGG | - | chr3_1:22984668-22984687 | None:intergenic | 40.0% | |
| GAGGAAAACGCAAAAAGAGT+GGG | - | chr3_1:22984720-22984739 | None:intergenic | 40.0% | |
| TCAGTAATTGCAAATGGGGA+TGG | + | chr3_1:22985071-22985090 | Msa0353190:intron | 40.0% | |
| CAGTAATTGCAAATGGGGAT+GGG | + | chr3_1:22985072-22985091 | Msa0353190:intron | 40.0% | |
| GTGGTTACGTCTTTGTTACA+TGG | + | chr3_1:22985345-22985364 | Msa0353190:intron | 40.0% | |
| !! | TAATGGATAGAGGCATTGAG+TGG | + | chr3_1:22985679-22985698 | Msa0353190:intron | 40.0% |
| GCAGCTATCTGCTCATAAAA+TGG | - | chr3_1:22985815-22985834 | None:intergenic | 40.0% | |
| TACACTGACATAGTCTCCTT+AGG | + | chr3_1:22985887-22985906 | Msa0353190:CDS | 40.0% | |
| CATCAGCATGCAAGACTATA+TGG | - | chr3_1:22986235-22986254 | None:intergenic | 40.0% | |
| CTTTCCAATCAGCTACTCAT+GGG | + | chr3_1:22986345-22986364 | Msa0353190:CDS | 40.0% | |
| TTTCCAATCAGCTACTCATG+GGG | + | chr3_1:22986346-22986365 | Msa0353190:CDS | 40.0% | |
| GATGACAAGCTTGCACTAAG+GGG | + | chr3_1:22984090-22984109 | Msa0353190:CDS | 45.0% | |
| ACATCAGCAGTGGTACAAAG+GGG | - | chr3_1:22984475-22984494 | None:intergenic | 45.0% | |
| CACATCAGCAGTGGTACAAA+GGG | - | chr3_1:22984476-22984495 | None:intergenic | 45.0% | |
| AGGAAGAGGAGAAGATTGTG+GGG | - | chr3_1:22984557-22984576 | None:intergenic | 45.0% | |
| GAGGAAGAGGAGAAGATTGT+GGG | - | chr3_1:22984558-22984577 | None:intergenic | 45.0% | |
| AGAGGAAGAGGAGAAGATTG+TGG | - | chr3_1:22984559-22984578 | None:intergenic | 45.0% | |
| GATCTGTTCAGAAGAGGAAG+AGG | - | chr3_1:22984571-22984590 | None:intergenic | 45.0% | |
| AAGGTCGATCTGTTCAGAAG+AGG | - | chr3_1:22984577-22984596 | None:intergenic | 45.0% | |
| TCCTCTTCCTCTTCTCTCTT+TGG | + | chr3_1:22984598-22984617 | Msa0353190:intron | 45.0% | |
| !! | GATTCGATAGTGGGAGTTGA+TGG | - | chr3_1:22984658-22984677 | None:intergenic | 45.0% |
| GGAGAGAAAGGTAGTGATGA+AGG | - | chr3_1:22984687-22984706 | None:intergenic | 45.0% | |
| AAAAGAGTGGGAGGAAATCG+CGG | - | chr3_1:22984708-22984727 | None:intergenic | 45.0% | |
| GAAAACGCAAAAAGAGTGGG+AGG | - | chr3_1:22984717-22984736 | None:intergenic | 45.0% | |
| GGAGGAAAACGCAAAAAGAG+TGG | - | chr3_1:22984721-22984740 | None:intergenic | 45.0% | |
| ! | CTTTTTGCGTTTTCCTCCGA+CGG | + | chr3_1:22984723-22984742 | Msa0353190:intron | 45.0% |
| TTCAACGGAGAGAGAGATAG+CGG | - | chr3_1:22984749-22984768 | None:intergenic | 45.0% | |
| CTCTTTGGTTGTTCCTCTGA+AGG | + | chr3_1:22985231-22985250 | Msa0353190:intron | 45.0% | |
| CTTAATCACTACGCCTTCAG+AGG | - | chr3_1:22985247-22985266 | None:intergenic | 45.0% | |
| ! | CATTGAGTGGTGGAATTGGT+TGG | + | chr3_1:22985692-22985711 | Msa0353190:intron | 45.0% |
| ACAGAATTACATCGGGACAC+GGG | - | chr3_1:22986192-22986211 | None:intergenic | 45.0% | |
| GACAGAATTACATCGGGACA+CGG | - | chr3_1:22986193-22986212 | None:intergenic | 45.0% | |
| TGAGTAGCTGATTGGAAAGC+TGG | - | chr3_1:22986344-22986363 | None:intergenic | 45.0% | |
| GCTTTCCAATCAGCTACTCA+TGG | + | chr3_1:22986344-22986363 | Msa0353190:CDS | 45.0% | |
| GATGACAAGCTTGCACTAAG+GGG | + | chr3_1:22984090-22984109 | Msa0353190:CDS | 45.0% | |
| ACATCAGCAGTGGTACAAAG+GGG | - | chr3_1:22984475-22984494 | None:intergenic | 45.0% | |
| CACATCAGCAGTGGTACAAA+GGG | - | chr3_1:22984476-22984495 | None:intergenic | 45.0% | |
| AGGAAGAGGAGAAGATTGTG+GGG | - | chr3_1:22984557-22984576 | None:intergenic | 45.0% | |
| GAGGAAGAGGAGAAGATTGT+GGG | - | chr3_1:22984558-22984577 | None:intergenic | 45.0% | |
| AGAGGAAGAGGAGAAGATTG+TGG | - | chr3_1:22984559-22984578 | None:intergenic | 45.0% | |
| GATCTGTTCAGAAGAGGAAG+AGG | - | chr3_1:22984571-22984590 | None:intergenic | 45.0% | |
| AAGGTCGATCTGTTCAGAAG+AGG | - | chr3_1:22984577-22984596 | None:intergenic | 45.0% | |
| TCCTCTTCCTCTTCTCTCTT+TGG | + | chr3_1:22984598-22984617 | Msa0353190:intron | 45.0% | |
| !! | GATTCGATAGTGGGAGTTGA+TGG | - | chr3_1:22984658-22984677 | None:intergenic | 45.0% |
| GGAGAGAAAGGTAGTGATGA+AGG | - | chr3_1:22984687-22984706 | None:intergenic | 45.0% | |
| AAAAGAGTGGGAGGAAATCG+CGG | - | chr3_1:22984708-22984727 | None:intergenic | 45.0% | |
| GAAAACGCAAAAAGAGTGGG+AGG | - | chr3_1:22984717-22984736 | None:intergenic | 45.0% | |
| GGAGGAAAACGCAAAAAGAG+TGG | - | chr3_1:22984721-22984740 | None:intergenic | 45.0% | |
| ! | CTTTTTGCGTTTTCCTCCGA+CGG | + | chr3_1:22984723-22984742 | Msa0353190:intron | 45.0% |
| TTCAACGGAGAGAGAGATAG+CGG | - | chr3_1:22984749-22984768 | None:intergenic | 45.0% | |
| CTCTTTGGTTGTTCCTCTGA+AGG | + | chr3_1:22985231-22985250 | Msa0353190:intron | 45.0% | |
| CTTAATCACTACGCCTTCAG+AGG | - | chr3_1:22985247-22985266 | None:intergenic | 45.0% | |
| ! | CATTGAGTGGTGGAATTGGT+TGG | + | chr3_1:22985692-22985711 | Msa0353190:intron | 45.0% |
| ACAGAATTACATCGGGACAC+GGG | - | chr3_1:22986192-22986211 | None:intergenic | 45.0% | |
| GACAGAATTACATCGGGACA+CGG | - | chr3_1:22986193-22986212 | None:intergenic | 45.0% | |
| TGAGTAGCTGATTGGAAAGC+TGG | - | chr3_1:22986344-22986363 | None:intergenic | 45.0% | |
| GCTTTCCAATCAGCTACTCA+TGG | + | chr3_1:22986344-22986363 | Msa0353190:CDS | 45.0% | |
| !!! | AATATAAAATTTTCTATTAT+AGG | + | chr3_1:22984233-22984252 | Msa0353190:intron | 5.0% |
| !!! | AATATAAAATTTTCTATTAT+AGG | + | chr3_1:22984233-22984252 | Msa0353190:intron | 5.0% |
| CCACATCAGCAGTGGTACAA+AGG | - | chr3_1:22984477-22984496 | None:intergenic | 50.0% | |
| CCTTTGTACCACTGCTGATG+TGG | + | chr3_1:22984474-22984493 | Msa0353190:intron | 50.0% | |
| CTGATGTGGCAGGGGTAATT+TGG | + | chr3_1:22984488-22984507 | Msa0353190:intron | 50.0% | |
| GAGAGAAGAGGAAGAGGAGA+AGG | - | chr3_1:22984596-22984615 | None:intergenic | 50.0% | |
| GCCAAAGAGAGAAGAGGAAG+AGG | - | chr3_1:22984602-22984621 | None:intergenic | 50.0% | |
| ! | AGGTGATAGAACGGCATCGA+CGG | - | chr3_1:22984635-22984654 | None:intergenic | 50.0% |
| !! | TCGATAGTGGGAGTTGATGG+AGG | - | chr3_1:22984655-22984674 | None:intergenic | 50.0% |
| GCTATCTCTCTCTCCGTTGA+AGG | + | chr3_1:22984748-22984767 | Msa0353190:intron | 50.0% | |
| CAAGGCTTGTGCTCTGTCTT+GGG | - | chr3_1:22985593-22985612 | None:intergenic | 50.0% | |
| !! | TGGATAGAGGCATTGAGTGG+TGG | + | chr3_1:22985682-22985701 | Msa0353190:intron | 50.0% |
| !! | GAGGCATTGAGTGGTGGAAT+TGG | + | chr3_1:22985688-22985707 | Msa0353190:intron | 50.0% |
| CAGAATTACATCGGGACACG+GGG | - | chr3_1:22986191-22986210 | None:intergenic | 50.0% | |
| TCCTGTCTGTGTAGGAACTC+TGG | + | chr3_1:22986286-22986305 | Msa0353190:intron | 50.0% | |
| ACTCTGGCAAAGTACACTGC+TGG | + | chr3_1:22986302-22986321 | Msa0353190:CDS | 50.0% | |
| TCTCCCCATGAGTAGCTGAT+TGG | - | chr3_1:22986352-22986371 | None:intergenic | 50.0% | |
| ACCTCACAAGAGAGACTGCA+TGG | + | chr3_1:22986396-22986415 | Msa0353190:CDS | 50.0% | |
| CCTCACAAGAGAGACTGCAT+GGG | + | chr3_1:22986397-22986416 | Msa0353190:CDS | 50.0% | |
| CCACATCAGCAGTGGTACAA+AGG | - | chr3_1:22984477-22984496 | None:intergenic | 50.0% | |
| CCTTTGTACCACTGCTGATG+TGG | + | chr3_1:22984474-22984493 | Msa0353190:intron | 50.0% | |
| CTGATGTGGCAGGGGTAATT+TGG | + | chr3_1:22984488-22984507 | Msa0353190:intron | 50.0% | |
| GAGAGAAGAGGAAGAGGAGA+AGG | - | chr3_1:22984596-22984615 | None:intergenic | 50.0% | |
| GCCAAAGAGAGAAGAGGAAG+AGG | - | chr3_1:22984602-22984621 | None:intergenic | 50.0% | |
| ! | AGGTGATAGAACGGCATCGA+CGG | - | chr3_1:22984635-22984654 | None:intergenic | 50.0% |
| !! | TCGATAGTGGGAGTTGATGG+AGG | - | chr3_1:22984655-22984674 | None:intergenic | 50.0% |
| GCTATCTCTCTCTCCGTTGA+AGG | + | chr3_1:22984748-22984767 | Msa0353190:intron | 50.0% | |
| CAAGGCTTGTGCTCTGTCTT+GGG | - | chr3_1:22985593-22985612 | None:intergenic | 50.0% | |
| !! | TGGATAGAGGCATTGAGTGG+TGG | + | chr3_1:22985682-22985701 | Msa0353190:intron | 50.0% |
| !! | GAGGCATTGAGTGGTGGAAT+TGG | + | chr3_1:22985688-22985707 | Msa0353190:intron | 50.0% |
| CAGAATTACATCGGGACACG+GGG | - | chr3_1:22986191-22986210 | None:intergenic | 50.0% | |
| TCCTGTCTGTGTAGGAACTC+TGG | + | chr3_1:22986286-22986305 | Msa0353190:intron | 50.0% | |
| ACTCTGGCAAAGTACACTGC+TGG | + | chr3_1:22986302-22986321 | Msa0353190:CDS | 50.0% | |
| TCTCCCCATGAGTAGCTGAT+TGG | - | chr3_1:22986352-22986371 | None:intergenic | 50.0% | |
| ACCTCACAAGAGAGACTGCA+TGG | + | chr3_1:22986396-22986415 | Msa0353190:CDS | 50.0% | |
| CCTCACAAGAGAGACTGCAT+GGG | + | chr3_1:22986397-22986416 | Msa0353190:CDS | 50.0% | |
| TGTACCACTGCTGATGTGGC+AGG | + | chr3_1:22984478-22984497 | Msa0353190:intron | 55.0% | |
| GTACCACTGCTGATGTGGCA+GGG | + | chr3_1:22984479-22984498 | Msa0353190:intron | 55.0% | |
| TACCACTGCTGATGTGGCAG+GGG | + | chr3_1:22984480-22984499 | Msa0353190:intron | 55.0% | |
| GGTGAGGCCAAAGAGAGAAG+AGG | - | chr3_1:22984608-22984627 | None:intergenic | 55.0% | |
| GGAGGAAATCGCGGAGAGAA+AGG | - | chr3_1:22984699-22984718 | None:intergenic | 55.0% | |
| GCAAGGCTTGTGCTCTGTCT+TGG | - | chr3_1:22985594-22985613 | None:intergenic | 55.0% | |
| GCCAGAGTTCCTACACAGAC+AGG | - | chr3_1:22986290-22986309 | None:intergenic | 55.0% | |
| CCCATGCAGTCTCTCTTGTG+AGG | - | chr3_1:22986400-22986419 | None:intergenic | 55.0% | |
| GAGAGACTGCATGGGAAGCA+TGG | + | chr3_1:22986405-22986424 | Msa0353190:CDS | 55.0% | |
| TGTACCACTGCTGATGTGGC+AGG | + | chr3_1:22984478-22984497 | Msa0353190:intron | 55.0% | |
| GTACCACTGCTGATGTGGCA+GGG | + | chr3_1:22984479-22984498 | Msa0353190:intron | 55.0% | |
| TACCACTGCTGATGTGGCAG+GGG | + | chr3_1:22984480-22984499 | Msa0353190:intron | 55.0% | |
| GGTGAGGCCAAAGAGAGAAG+AGG | - | chr3_1:22984608-22984627 | None:intergenic | 55.0% | |
| GGAGGAAATCGCGGAGAGAA+AGG | - | chr3_1:22984699-22984718 | None:intergenic | 55.0% | |
| GCAAGGCTTGTGCTCTGTCT+TGG | - | chr3_1:22985594-22985613 | None:intergenic | 55.0% | |
| GCCAGAGTTCCTACACAGAC+AGG | - | chr3_1:22986290-22986309 | None:intergenic | 55.0% | |
| CCCATGCAGTCTCTCTTGTG+AGG | - | chr3_1:22986400-22986419 | None:intergenic | 55.0% | |
| GAGAGACTGCATGGGAAGCA+TGG | + | chr3_1:22986405-22986424 | Msa0353190:CDS | 55.0% | |
| TACCCCTGCCACATCAGCAG+TGG | - | chr3_1:22984485-22984504 | None:intergenic | 60.0% | |
| !! | TAGAACGGCATCGACGGCGA+CGG | - | chr3_1:22984629-22984648 | None:intergenic | 60.0% |
| ! | GAGAGAGAGATAGCGGCCGT+CGG | - | chr3_1:22984742-22984761 | None:intergenic | 60.0% |
| TACCCCTGCCACATCAGCAG+TGG | - | chr3_1:22984485-22984504 | None:intergenic | 60.0% | |
| !! | TAGAACGGCATCGACGGCGA+CGG | - | chr3_1:22984629-22984648 | None:intergenic | 60.0% |
| ! | GAGAGAGAGATAGCGGCCGT+CGG | - | chr3_1:22984742-22984761 | None:intergenic | 60.0% |
| ! | AGAGAGATAGCGGCCGTCGG+AGG | - | chr3_1:22984739-22984758 | None:intergenic | 65.0% |
| ! | AGAGAGATAGCGGCCGTCGG+AGG | - | chr3_1:22984739-22984758 | None:intergenic | 65.0% |
| !! | CGGCATCGACGGCGACGGTG+AGG | - | chr3_1:22984624-22984643 | None:intergenic | 75.0% |
| !! | CGGCATCGACGGCGACGGTG+AGG | - | chr3_1:22984624-22984643 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 22984039 | 22986460 | 22984039 | ID=Msa0353190;Name=Msa0353190 |
| chr3_1 | mRNA | 22984039 | 22986460 | 22984039 | ID=Msa0353190-mRNA-1;Parent=Msa0353190;Name=Msa0353190-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|0.66|1|1|3|0|139 |
| chr3_1 | exon | 22984039 | 22984168 | 22984039 | ID=Msa0353190-mRNA-1:exon:5152;Parent=Msa0353190-mRNA-1 |
| chr3_1 | exon | 22985780 | 22985908 | 22985780 | ID=Msa0353190-mRNA-1:exon:5153;Parent=Msa0353190-mRNA-1 |
| chr3_1 | exon | 22986300 | 22986460 | 22986300 | ID=Msa0353190-mRNA-1:exon:5154;Parent=Msa0353190-mRNA-1 |
| chr3_1 | CDS | 22984039 | 22984168 | 22984039 | ID=Msa0353190-mRNA-1:cds;Parent=Msa0353190-mRNA-1 |
| chr3_1 | CDS | 22985780 | 22985908 | 22985780 | ID=Msa0353190-mRNA-1:cds;Parent=Msa0353190-mRNA-1 |
| chr3_1 | CDS | 22986300 | 22986460 | 22986300 | ID=Msa0353190-mRNA-1:cds;Parent=Msa0353190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
