AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1260100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1260100 MtrunA17_Chr4g0062531 49.219 128 60 5 181 303 1 128 5.24e-28 109
Msa1260100 MtrunA17_Chr4g0062531 44.186 129 59 4 7 123 1 128 1.85e-25 102
Msa1260100 MtrunA17_Chr4g0063091 36.788 193 76 11 181 356 1 164 7.80e-18 80.1
Msa1260100 MtrunA17_Chr4g0063091 41.727 139 67 7 7 131 1 139 8.03e-17 77.4
Msa1260100 MtrunA17_Chr4g0062541 48.052 77 34 3 7 80 1 74 3.00e-15 70.1
Msa1260100 MtrunA17_Chr4g0062541 48.684 76 32 4 181 251 1 74 5.34e-13 63.9
Msa1260100 MtrunA17_Chr4g0062451 49.254 67 28 3 7 70 1 64 3.27e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 69 sgRNAs with CRISPR-Local

Find 650 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATGATTGGGTTGTGGCTT+TGG 0.174478 8_2:+61974684 None:intergenic
TTGTTGTGATCCACAAAATA+TGG 0.242038 8_2:+61976454 None:intergenic
TTGTTGTGATCCACAAAATA+TGG 0.242038 8_2:+61985198 None:intergenic
TCTGTTGCAGCAACTGCTTC+TGG 0.268052 8_2:-61985144 Msa1260100:CDS
CATGATTGGGTTGTGGCTTT+GGG 0.269865 8_2:+61974685 None:intergenic
TCTGTTGCAGCAACTGCTTC+TGG 0.272337 8_2:-61976400 Msa1260100:CDS
GGCATTTCTACTTGCATTCA+TGG 0.272560 8_2:-61985304 Msa1260100:CDS
TTGTGATATTCATATGGATA+TGG 0.284356 8_2:-61976371 Msa1260100:CDS
TTGTGATATTCATATGGATA+TGG 0.284356 8_2:-61985115 Msa1260100:CDS
GAAAACATTTGTTACTGTTC+TGG 0.284561 8_2:-61985325 Msa1260100:CDS
GCATATCATTATTCCCTCTT+TGG 0.290009 8_2:-61974608 Msa1260100:CDS
GCATGATTGGGTTGTGGCTT+TGG 0.295407 8_2:+61983258 None:intergenic
CATGATTGGGTTGTGGCTTT+GGG 0.329561 8_2:+61983259 None:intergenic
GGTACTGATGCTGGGGAACT+TGG 0.373729 8_2:+61974660 None:intergenic
ATGAAGTTGCCTGCTGTTTG+TGG 0.381335 8_2:-61985063 Msa1260100:CDS
TGGGGAACTTGGACCATGAT+TGG 0.383029 8_2:+61974671 None:intergenic
GGGGAACTTGGACCATGATT+GGG 0.385347 8_2:+61974672 None:intergenic
CTGTCATCTGCCACTGGAAC+TGG 0.389642 8_2:+61974639 None:intergenic
ATGAAGTTGCCTGCTGTTTG+TGG 0.395092 8_2:-61976319 Msa1260100:CDS
TGGGGAACTTTGAGCATGAT+TGG 0.396691 8_2:+61983245 None:intergenic
CTCCATTTCAAATATGCATT+GGG 0.410624 8_2:+61979476 None:intergenic
CTGCATTTGTGATATTCATA+TGG 0.420111 8_2:-61985121 Msa1260100:CDS
AGTATTGCTATCACCTCATT+AGG 0.421068 8_2:+61974536 None:intergenic
TTGCATTTGTGATATTCATA+TGG 0.428883 8_2:-61976377 Msa1260100:CDS
GGGGAACTTTGAGCATGATT+GGG 0.436706 8_2:+61983246 None:intergenic
TGCCCAATGCATATTTGAAA+TGG 0.437702 8_2:-61979478 Msa1260100:CDS
ACTTGAACTGGTACTGATGC+TGG 0.443530 8_2:+61983225 None:intergenic
CTTTGAGCATGATTGGGTTG+TGG 0.444918 8_2:+61983252 None:intergenic
ACTGGAACTGGTACTGATGC+TGG 0.453221 8_2:+61974651 None:intergenic
CTTGGACCATGATTGGGTTG+TGG 0.454246 8_2:+61974678 None:intergenic
ATCGATCTGCAGTTCGTAGT+TGG 0.454345 8_2:+61985249 None:intergenic
ATCGATCTGCAGCTTGTAGT+TGG 0.460073 8_2:+61976505 None:intergenic
ACTCCATTTCAAATATGCAT+TGG 0.461851 8_2:+61979475 None:intergenic
GCTAGTGCTGCTCCATCCTC+AGG 0.471825 8_2:-61976179 Msa1260100:intron
CTGCAGTTCGTAGTTGGAGT+TGG 0.493012 8_2:+61985255 None:intergenic
GAGGTGATAGCAATACTCAT+AGG 0.502033 8_2:-61974530 Msa1260100:three_prime_UTR
TTGACAGGATGGCAAGATGC+AGG 0.525479 8_2:-61979505 Msa1260100:intron
CTGGAACTGGTACTGATGCT+GGG 0.530246 8_2:+61974652 None:intergenic
CTGCAGCTTGTAGTTGGAGT+TGG 0.539339 8_2:+61976511 None:intergenic
CCAAAGCCACAACCCAATCA+TGG 0.540789 8_2:-61974684 Msa1260100:CDS
CTTGAACTGGTACTGATGCT+GGG 0.542768 8_2:+61983226 None:intergenic
ATCATCTTTGTGCTATCCAA+CGG 0.543327 8_2:+61985084 None:intergenic
TTAATTTACATACCTGAGGA+TGG 0.546868 8_2:+61976167 None:intergenic
ATCGATCATGAATGATATGA+TGG 0.549337 8_2:-61976488 Msa1260100:CDS
GGCTTTGGGCTACTCTGTGA+AGG 0.550181 8_2:+61974699 None:intergenic
GGCTTTGGGCTACTCTGTGA+AGG 0.550181 8_2:+61983273 None:intergenic
ATCATATTTGTGCTATCCAA+CGG 0.553944 8_2:+61976340 None:intergenic
TGATAGCAATACTCTTGCTA+TGG 0.555613 8_2:-61974575 Msa1260100:CDS
TTCTCTAAAGCATATGACTC+AGG 0.558704 8_2:+61974747 None:intergenic
TTCTCTAAAGCATATGACTC+AGG 0.558704 8_2:+61983321 None:intergenic
AGGTGATAGCAATACTCATA+GGG 0.566357 8_2:-61974529 Msa1260100:three_prime_UTR
TCTAAACTGTCATCTGCCAC+TGG 0.570967 8_2:+61974633 None:intergenic
TTAAATATTTACAGTGACAA+GGG 0.589773 8_2:+61985031 None:intergenic
ATTAAATATTTACAGTGACA+AGG 0.592750 8_2:+61985030 None:intergenic
AGTTGAGAATAAGCCTAATG+AGG 0.594955 8_2:-61974549 Msa1260100:exon
TTAAATATTTACAGTGACAA+GGG 0.598831 8_2:+61976287 None:intergenic
GTTAAATATTTACAGTGACA+AGG 0.601808 8_2:+61976286 None:intergenic
AGTGAGACTCCACAAACAGC+AGG 0.605216 8_2:+61976310 None:intergenic
AGTGAGACTCCACAAACAGC+AGG 0.605216 8_2:+61985054 None:intergenic
GTGGCAGATGACAGTTTAGA+CGG 0.611316 8_2:-61974630 Msa1260100:CDS
AGCATCAGTACCAGTTCCAG+TGG 0.620940 8_2:-61974649 Msa1260100:CDS
TGGAACTGGTACTGATGCTG+GGG 0.625070 8_2:+61974653 None:intergenic
TTGAACTGGTACTGATGCTG+GGG 0.625070 8_2:+61983227 None:intergenic
GGTGCAAACAAAGCATTCGA+TGG 0.625812 8_2:+61985276 None:intergenic
GATTCAAAAGCAGAGCAACA+TGG 0.634078 8_2:+61976421 None:intergenic
GATTCAAAAGCAGAGCAACA+TGG 0.634078 8_2:+61985165 None:intergenic
ACAGGATGGCAAGATGCAGG+AGG 0.667795 8_2:-61979502 Msa1260100:intron
AATTGACAAAGTGATGGTGT+TGG 0.669637 8_2:+61974497 None:intergenic
ACTGAGAATTGACAAAGTGA+TGG 0.675147 8_2:+61974491 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATATATTTTCTCTTTTT+GGG + chr8_2:61975811-61975830 None:intergenic 10.0%
!! AACTTAATTGATATAAAAAT+TGG + chr8_2:61976998-61977017 None:intergenic 10.0%
!!! ATTTTTCTTCTTAATATTTT+TGG + chr8_2:61980603-61980622 None:intergenic 10.0%
!! TTTAAATATACAAAAAGTTA+GGG + chr8_2:61980670-61980689 None:intergenic 10.0%
!!! TTTTAAATATACAAAAAGTT+AGG + chr8_2:61980671-61980690 None:intergenic 10.0%
!! CAAAATATACAATTAAAATA+TGG - chr8_2:61981181-61981200 Msa1260100:intron 10.0%
!! TGATTAAAATTAATTATCAA+AGG - chr8_2:61981768-61981787 Msa1260100:intron 10.0%
!!! TTTTGATCTTTTAATATATA+AGG + chr8_2:61981938-61981957 None:intergenic 10.0%
!! AACAATCAACAATATAATTT+GGG - chr8_2:61974990-61975009 Msa1260100:intron 15.0%
!! TTCAAAACAAAACAAAAAAT+TGG - chr8_2:61975117-61975136 Msa1260100:intron 15.0%
!!! ATTCTTTTTTAGCTTATATT+TGG - chr8_2:61975227-61975246 Msa1260100:intron 15.0%
!!! CAAAATATATTTTCTCTTTT+TGG + chr8_2:61975812-61975831 None:intergenic 15.0%
!!! TAAAAATAAAAAAAAGTGCA+TGG + chr8_2:61975873-61975892 None:intergenic 15.0%
!! ATAAATTGAATATGAATGAT+AGG + chr8_2:61976291-61976310 None:intergenic 15.0%
!!! GAAAGCAAATAATTTTTTTT+AGG + chr8_2:61977148-61977167 None:intergenic 15.0%
!! ATATAGATAACAGAAATATT+TGG + chr8_2:61978140-61978159 None:intergenic 15.0%
!!! AAATATTTCTGTTATCTATA+TGG - chr8_2:61978139-61978158 Msa1260100:intron 15.0%
!! CTATAAATATCAAGAAAATA+GGG + chr8_2:61978869-61978888 None:intergenic 15.0%
!!! TTTTATGCATATATCATATA+TGG + chr8_2:61979221-61979240 None:intergenic 15.0%
!! GACAAATAGAATTAATTTAA+TGG + chr8_2:61980307-61980326 None:intergenic 15.0%
!! TAAATTAATTCTATTTGTCT+TGG - chr8_2:61980308-61980327 Msa1260100:intron 15.0%
!! TAAATAAAGAAACAGATTAT+TGG + chr8_2:61980802-61980821 None:intergenic 15.0%
!!! AATAATCTGTTTCTTTATTT+AGG - chr8_2:61980801-61980820 Msa1260100:intron 15.0%
!! ATATGGTTTATAATTAATAG+TGG - chr8_2:61981198-61981217 Msa1260100:intron 15.0%
!!! TACAAACAAACATTTTATAA+AGG + chr8_2:61981447-61981466 None:intergenic 15.0%
!! AAAAGTGATATATTTCATAT+AGG + chr8_2:61982763-61982782 None:intergenic 15.0%
!! AACAATCAACAATATAATTT+GGG - chr8_2:61974990-61975009 Msa1260100:intron 15.0%
!!! TCATTTTCAAACAAAAAAAT+CGG - chr8_2:61983859-61983878 Msa1260100:intron 15.0%
!! CTTGAATTAATAGAAATAAA+TGG - chr8_2:61983999-61984018 Msa1260100:intron 15.0%
!! TTAATAGAAATAAATGGATA+TGG - chr8_2:61984005-61984024 Msa1260100:intron 15.0%
!!! AGAAACAAAAAATTGATAAT+AGG + chr8_2:61984386-61984405 None:intergenic 15.0%
!! ATAAATAGAATTTGAATGAT+GGG + chr8_2:61984865-61984884 None:intergenic 15.0%
!!! TATATTTTACATTGCATATA+TGG - chr8_2:61984895-61984914 Msa1260100:intron 15.0%
!!! ATATTTTACATTGCATATAT+GGG - chr8_2:61984896-61984915 Msa1260100:intron 15.0%
!! TTAAATATTTACAGTGACAA+GGG + chr8_2:61974822-61974841 None:intergenic 20.0%
!! ATTAAATATTTACAGTGACA+AGG + chr8_2:61974823-61974842 None:intergenic 20.0%
!! ATAATTAATTTACATACCTG+AGG + chr8_2:61974943-61974962 None:intergenic 20.0%
!! CAACAATCAACAATATAATT+TGG - chr8_2:61974989-61975008 Msa1260100:intron 20.0%
!! TAGCTTATATTTGGATTAAA+TGG - chr8_2:61975236-61975255 Msa1260100:intron 20.0%
!!! CTATTGAATTGTTATTATCT+TGG - chr8_2:61975294-61975313 Msa1260100:intron 20.0%
!!! AATTTTAGATACACTACAAT+AGG - chr8_2:61975505-61975524 Msa1260100:intron 20.0%
!! AAAGTTAATGTGTTTATAAG+TGG + chr8_2:61976038-61976057 None:intergenic 20.0%
!! TATACTTTACATTGCATATA+TGG - chr8_2:61976321-61976340 Msa1260100:CDS 20.0%
!! ATACTTTACATTGCATATAT+GGG - chr8_2:61976322-61976341 Msa1260100:CDS 20.0%
!!! ATTACTTTTCCATGAATTTA+TGG - chr8_2:61976479-61976498 Msa1260100:CDS 20.0%
!!! TTACTTTTCCATGAATTTAT+GGG - chr8_2:61976480-61976499 Msa1260100:CDS 20.0%
!! CAAAAAACCAATAAGAAAAA+GGG + chr8_2:61976675-61976694 None:intergenic 20.0%
!! TTGCGATAATAATAATCATA+TGG - chr8_2:61976692-61976711 Msa1260100:intron 20.0%
!! ATGATAGTACTGTAATTAAT+TGG - chr8_2:61977088-61977107 Msa1260100:intron 20.0%
!!! TAATTAATTGGTGGATTTAT+AGG - chr8_2:61977100-61977119 Msa1260100:intron 20.0%
!!! TGAGTTCTATGATTATTTTT+TGG - chr8_2:61977217-61977236 Msa1260100:intron 20.0%
!!! TCCTTTTTTAATATCTTAAC+AGG - chr8_2:61977377-61977396 Msa1260100:intron 20.0%
!!! CCTTTTTTAATATCTTAACA+GGG - chr8_2:61977378-61977397 Msa1260100:intron 20.0%
!! AAAAGACCCTAAAAAAATAA+GGG + chr8_2:61977422-61977441 None:intergenic 20.0%
!! TAAAAGACCCTAAAAAAATA+AGG + chr8_2:61977423-61977442 None:intergenic 20.0%
!! ATGAAGAAATAGTTGAAATA+TGG - chr8_2:61978530-61978549 Msa1260100:intron 20.0%
!! TGAAGAAATAGTTGAAATAT+GGG - chr8_2:61978531-61978550 Msa1260100:intron 20.0%
!! GCTATAAATATCAAGAAAAT+AGG + chr8_2:61978870-61978889 None:intergenic 20.0%
!! TTATTCTATTATGTTCTCTT+TGG - chr8_2:61978891-61978910 Msa1260100:intron 20.0%
!! ATATGTCATGAAATGTTTAT+TGG - chr8_2:61978988-61979007 Msa1260100:intron 20.0%
!! TTTATTTATGAATGTCTAAC+TGG - chr8_2:61979069-61979088 Msa1260100:intron 20.0%
!! TGATATATGCATAAAAAAGA+AGG - chr8_2:61979225-61979244 Msa1260100:intron 20.0%
!! AATGAAGAAACATAGTATAA+AGG - chr8_2:61979518-61979537 Msa1260100:intron 20.0%
!! ATGAAGAAACATAGTATAAA+GGG - chr8_2:61979519-61979538 Msa1260100:intron 20.0%
!!! AGTATAGTTAAATTTGAAGT+TGG + chr8_2:61980013-61980032 None:intergenic 20.0%
!! AGAATTAATTTAATGGTCAA+AGG + chr8_2:61980300-61980319 None:intergenic 20.0%
!! AAATTAAAAATATGCTCTGT+TGG - chr8_2:61980468-61980487 Msa1260100:intron 20.0%
!!! ATTTCACTAATTGATTCAAA+AGG + chr8_2:61980724-61980743 None:intergenic 20.0%
!!! CAAAAAAGTATGGATTATAT+AGG + chr8_2:61980849-61980868 None:intergenic 20.0%
!!! CTATATAATCCATACTTTTT+TGG - chr8_2:61980847-61980866 Msa1260100:intron 20.0%
!!! AATCAAGAATTTAATGCTTT+TGG + chr8_2:61981753-61981772 None:intergenic 20.0%
!! AGAATGTATGAAAATATCAA+TGG - chr8_2:61982160-61982179 Msa1260100:intron 20.0%
!! TGACATATTTGCATATTATT+TGG - chr8_2:61982688-61982707 Msa1260100:intron 20.0%
!! TATATTTCATATAGGAGTTT+AGG + chr8_2:61982755-61982774 None:intergenic 20.0%
!! TTAAATATTTACAGTGACAA+GGG + chr8_2:61974822-61974841 None:intergenic 20.0%
!! ATAATTAATTTACATACCTG+AGG + chr8_2:61974943-61974962 None:intergenic 20.0%
!! CAACAATCAACAATATAATT+TGG - chr8_2:61974989-61975008 Msa1260100:intron 20.0%
!!! ATTCCATTTATTTTGACAAA+TGG - chr8_2:61984453-61984472 Msa1260100:intron 20.0%
!! GATAAATAGAATTTGAATGA+TGG + chr8_2:61984866-61984885 None:intergenic 20.0%
!!! AATGTAAAATATAGTGGAAT+AGG + chr8_2:61984888-61984907 None:intergenic 20.0%
!! ATATGCAATGTAAAATATAG+TGG + chr8_2:61984894-61984913 None:intergenic 20.0%
!!! ATTACTTTTCCAAGAATTTA+TGG - chr8_2:61985053-61985072 Msa1260100:CDS 20.0%
!!! ATCGATTTTGAATGATATGA+TGG - chr8_2:61974618-61974637 Msa1260100:CDS 25.0%
! TTGTGATATTCATATGGATA+TGG - chr8_2:61974735-61974754 Msa1260100:CDS 25.0%
! ATTAATGCAATCACATGTAT+CGG + chr8_2:61975087-61975106 None:intergenic 25.0%
!! TTTTATCATCTTACACTAGT+GGG - chr8_2:61975403-61975422 Msa1260100:intron 25.0%
!! TGTATCTAAAATTGAAGGAA+AGG + chr8_2:61975498-61975517 None:intergenic 25.0%
!! TGTAGTGTATCTAAAATTGA+AGG + chr8_2:61975503-61975522 None:intergenic 25.0%
! GGTTATGTTAGATTATAACA+TGG - chr8_2:61975723-61975742 Msa1260100:intron 25.0%
! TTAATGTGTTTATAAGTGGT+GGG + chr8_2:61976034-61976053 None:intergenic 25.0%
! TAAAAACATCTCACATATGA+AGG + chr8_2:61976068-61976087 None:intergenic 25.0%
! TTGAATATGAATGATAGGAT+GGG + chr8_2:61976286-61976305 None:intergenic 25.0%
! ATTGAATATGAATGATAGGA+TGG + chr8_2:61976287-61976306 None:intergenic 25.0%
!! AATGTAAAGTATAGTGGAAT+GGG + chr8_2:61976314-61976333 None:intergenic 25.0%
! ATATGCAATGTAAAGTATAG+TGG + chr8_2:61976320-61976339 None:intergenic 25.0%
! CTATTACTTTGGACTAATTA+TGG - chr8_2:61976406-61976425 Msa1260100:CDS 25.0%
!!! TTATCAGATTTTGACTCTAT+TGG + chr8_2:61976434-61976453 None:intergenic 25.0%
!! CATTTTTCCCTTTTTCTTAT+TGG - chr8_2:61976665-61976684 Msa1260100:intron 25.0%
! GCAAAAAACCAATAAGAAAA+AGG + chr8_2:61976676-61976695 None:intergenic 25.0%
! TAAAGAACATGTCAAACAAA+AGG + chr8_2:61976907-61976926 None:intergenic 25.0%
! AAACAAGCGATAAAATCAAT+AGG + chr8_2:61977024-61977043 None:intergenic 25.0%
!! TTGATTTTATCGCTTGTTTA+TGG - chr8_2:61977025-61977044 Msa1260100:intron 25.0%
! ATAGTACTGTAATTAATTGG+TGG - chr8_2:61977091-61977110 Msa1260100:intron 25.0%
! TTTATAGGCTCAAACTTATT+TGG - chr8_2:61977115-61977134 Msa1260100:intron 25.0%
!!! ATTTTTTGGAAAATGCTAAC+AGG - chr8_2:61977231-61977250 Msa1260100:intron 25.0%
! CCCTGTTAAGATATTAAAAA+AGG + chr8_2:61977381-61977400 None:intergenic 25.0%
! AAAATAAGGGTCATAGTTAA+CGG + chr8_2:61977409-61977428 None:intergenic 25.0%
!!! ACTATGACCCTTATTTTTTT+AGG - chr8_2:61977412-61977431 Msa1260100:intron 25.0%
!!! CTATGACCCTTATTTTTTTA+GGG - chr8_2:61977413-61977432 Msa1260100:intron 25.0%
! ATTTGAATCATCAATTCATG+AGG + chr8_2:61977758-61977777 None:intergenic 25.0%
! AAAATGTGAATTAGCAAAGT+GGG + chr8_2:61977858-61977877 None:intergenic 25.0%
!! TTCACTAAACCTTAGATTTT+TGG - chr8_2:61977979-61977998 Msa1260100:intron 25.0%
! CATTCTGATCTTGAAATTAA+AGG - chr8_2:61978013-61978032 Msa1260100:intron 25.0%
!! CAGAAATATTTGGAATCATT+AGG + chr8_2:61978130-61978149 None:intergenic 25.0%
! TTCTGTTATCTATATGGATT+TGG - chr8_2:61978145-61978164 Msa1260100:intron 25.0%
! TCTGTTATCTATATGGATTT+GGG - chr8_2:61978146-61978165 Msa1260100:intron 25.0%
! TCAGTTAAGAGATGATTATT+TGG - chr8_2:61978174-61978193 Msa1260100:intron 25.0%
! TTCAATCTACTATGATTCAT+CGG - chr8_2:61978201-61978220 Msa1260100:intron 25.0%
! TGATCATAATTATTCACGTT+TGG - chr8_2:61978228-61978247 Msa1260100:intron 25.0%
! ATTCATGAGAGTTCAAATAA+GGG + chr8_2:61978306-61978325 None:intergenic 25.0%
! TATTCATGAGAGTTCAAATA+AGG + chr8_2:61978307-61978326 None:intergenic 25.0%
!! TATTATTGCCTTTGACTTAA+TGG - chr8_2:61978402-61978421 Msa1260100:intron 25.0%
!! TTTCTTTTCCATTAAGTCAA+AGG + chr8_2:61978413-61978432 None:intergenic 25.0%
!! ACTTTTAGATATACATTTGC+CGG - chr8_2:61978432-61978451 Msa1260100:intron 25.0%
! TCATGGTAAAAAATATCATC+CGG + chr8_2:61978454-61978473 None:intergenic 25.0%
! AGTCATAATAATTAGGATCA+TGG + chr8_2:61978471-61978490 None:intergenic 25.0%
! ATCCTAATTATTATGACTTG+TGG - chr8_2:61978473-61978492 Msa1260100:intron 25.0%
!! TCCTAATTATTATGACTTGT+GGG - chr8_2:61978474-61978493 Msa1260100:intron 25.0%
! ACAAAATGTGGTGATATTAT+TGG - chr8_2:61978649-61978668 Msa1260100:intron 25.0%
! AAATATCAAGAAAATAGGGA+AGG + chr8_2:61978865-61978884 None:intergenic 25.0%
! TCAGTATCAAATACTACTAT+AGG - chr8_2:61979388-61979407 Msa1260100:intron 25.0%
! AGGAAATTATTATTCATTCC+AGG - chr8_2:61979740-61979759 Msa1260100:intron 25.0%
! GGAAATTATTATTCATTCCA+GGG - chr8_2:61979741-61979760 Msa1260100:intron 25.0%
! TATCAAGCTTGACTTATATA+TGG + chr8_2:61979791-61979810 None:intergenic 25.0%
! TTGCACAAAAAGTAAAGTTA+GGG + chr8_2:61979865-61979884 None:intergenic 25.0%
! TTTGCACAAAAAGTAAAGTT+AGG + chr8_2:61979866-61979885 None:intergenic 25.0%
!!! TAACTTTACTTTTTGTGCAA+AGG - chr8_2:61979865-61979884 Msa1260100:intron 25.0%
! CTCAATTTGAATGTATGTTA+AGG - chr8_2:61980170-61980189 Msa1260100:intron 25.0%
!!! GTATATAAGTTGATTGAGTT+TGG - chr8_2:61980223-61980242 Msa1260100:intron 25.0%
! ATTCAAAAGGAAAAAACGTT+TGG + chr8_2:61980711-61980730 None:intergenic 25.0%
! TGAATCAATTAGTGAAATGA+CGG - chr8_2:61980726-61980745 Msa1260100:intron 25.0%
! TCAACAAGGTATACAAAAAT+AGG + chr8_2:61980756-61980775 None:intergenic 25.0%
!!! AATTAATAACTTGCTCAACA+AGG + chr8_2:61980770-61980789 None:intergenic 25.0%
! TGAATTATTTACCTGTTGTT+AGG + chr8_2:61981005-61981024 None:intergenic 25.0%
! TAATTGTATATCTGTATTGC+TGG - chr8_2:61981146-61981165 Msa1260100:intron 25.0%
! TTTCACAATCTTTCACATTA+AGG - chr8_2:61981418-61981437 Msa1260100:intron 25.0%
!!! TTTTACTTTTATGTCATCTG+TGG + chr8_2:61981479-61981498 None:intergenic 25.0%
!! AGGTAAAAATGCCATTTAAA+GGG - chr8_2:61982205-61982224 Msa1260100:intron 25.0%
!!! ATATTATTTGGAGTTTTCCA+TGG - chr8_2:61982700-61982719 Msa1260100:intron 25.0%
! ACAAATATGCCAAAAGTTTA+AGG + chr8_2:61982889-61982908 None:intergenic 25.0%
!! CTTTTGTATAGAGTTTGTAA+CGG - chr8_2:61983207-61983226 Msa1260100:intron 25.0%
!!! TTCTTCTTTGTTGTTATTTC+CGG - chr8_2:61983232-61983251 Msa1260100:intron 25.0%
! TTGCATTTGTGATATTCATA+TGG - chr8_2:61983473-61983492 Msa1260100:intron 25.0%
! TTGTGATATTCATATGGATA+TGG - chr8_2:61974735-61974754 Msa1260100:CDS 25.0%
! GTTAAATATTTACAGTGACA+AGG + chr8_2:61983567-61983586 None:intergenic 25.0%
!! AACTCATTTTCATGATATAG+TGG - chr8_2:61983646-61983665 Msa1260100:intron 25.0%
! TTTAATACAATCACATGCAT+CGG + chr8_2:61983834-61983853 None:intergenic 25.0%
! TGTAAATGTGAGATGATAAA+AGG + chr8_2:61984140-61984159 None:intergenic 25.0%
! AAAACTGAAGGAAAAGTAAA+AGG + chr8_2:61984227-61984246 None:intergenic 25.0%
! CACAATATTTCCTCTTTAAA+TGG - chr8_2:61984427-61984446 Msa1260100:intron 25.0%
! TCTCCATTTGTCAAAATAAA+TGG + chr8_2:61984459-61984478 None:intergenic 25.0%
!!! ATTTATTTTGACAAATGGAG+AGG - chr8_2:61984458-61984477 Msa1260100:intron 25.0%
!! AGTTCAATGATTCGAATTTT+TGG + chr8_2:61984565-61984584 None:intergenic 25.0%
!! AAAGTTAATGTGTTTCTAAG+TGG + chr8_2:61984599-61984618 None:intergenic 25.0%
! AAATTAAAGATGTCTCACAT+AGG + chr8_2:61984633-61984652 None:intergenic 25.0%
!!! TTTTCAGATTTTGACTCTAT+TGG + chr8_2:61985008-61985027 None:intergenic 25.0%
! ACATAACAACCATAAATTCT+TGG + chr8_2:61985065-61985084 None:intergenic 25.0%
! GAAAACATTTGTTACTGTTC+TGG - chr8_2:61974525-61974544 Msa1260100:three_prime_UTR 30.0%
! TGAATGTCTTCCATATTTTG+TGG - chr8_2:61974642-61974661 Msa1260100:CDS 30.0%
TTGTTGTGATCCACAAAATA+TGG + chr8_2:61974655-61974674 None:intergenic 30.0%
CTGCATTTGTGATATTCATA+TGG - chr8_2:61974729-61974748 Msa1260100:CDS 30.0%
! ACTTCATTTTCATGATACAG+TGG - chr8_2:61974899-61974918 Msa1260100:intron 30.0%
TTAATTTACATACCTGAGGA+TGG + chr8_2:61974939-61974958 None:intergenic 30.0%
AACTGATATGTGTCATAGAT+CGG + chr8_2:61975057-61975076 None:intergenic 30.0%
TTCATTTGACTGTTGTTACA+TGG - chr8_2:61975202-61975221 Msa1260100:intron 30.0%
TAAATCTACAATACCACTCT+TGG + chr8_2:61975353-61975372 None:intergenic 30.0%
! CTTTTATCATCTTACACTAG+TGG - chr8_2:61975402-61975421 Msa1260100:intron 30.0%
AAAATTGAAGGAAAGGTGAA+AGG + chr8_2:61975491-61975510 None:intergenic 30.0%
AATAGGAAGTGACATTATTG+TGG - chr8_2:61975522-61975541 Msa1260100:intron 30.0%
ATAGGAAGTGACATTATTGT+GGG - chr8_2:61975523-61975542 Msa1260100:intron 30.0%
!! TATATGGTTGATAGAGGATA+TGG + chr8_2:61975606-61975625 None:intergenic 30.0%
TCTAACATAACCAATTACGA+CGG + chr8_2:61975715-61975734 None:intergenic 30.0%
ATATACGAACAACTCAAAAG+AGG + chr8_2:61975971-61975990 None:intergenic 30.0%
! AATGGTTCAAAATTTTGGAC+GGG + chr8_2:61975999-61976018 None:intergenic 30.0%
! CAATGGTTCAAAATTTTGGA+CGG + chr8_2:61976000-61976019 None:intergenic 30.0%
! AGTCCAATGGTTCAAAATTT+TGG + chr8_2:61976004-61976023 None:intergenic 30.0%
TAATGTGTTTATAAGTGGTG+GGG + chr8_2:61976033-61976052 None:intergenic 30.0%
GTTAATGTGTTTATAAGTGG+TGG + chr8_2:61976035-61976054 None:intergenic 30.0%
!!! AGATGTTTTTAGTTTCCAAC+CGG - chr8_2:61976077-61976096 Msa1260100:intron 30.0%
!!! TCTCCATATTTTGACCTTTT+CGG - chr8_2:61976148-61976167 Msa1260100:intron 30.0%
! CAATGTAAAGTATAGTGGAA+TGG + chr8_2:61976315-61976334 None:intergenic 30.0%
ACATAACACCCATAAATTCA+TGG + chr8_2:61976491-61976510 None:intergenic 30.0%
AGAAAAAGGGAAAAATGATC+CGG + chr8_2:61976662-61976681 None:intergenic 30.0%
!! TATAATCCTTTGGGTTAGTT+TGG + chr8_2:61976795-61976814 None:intergenic 30.0%
TCGCATGATTATAATCCTTT+GGG + chr8_2:61976804-61976823 None:intergenic 30.0%
TATAACTCAAAGGATGACAA+AGG - chr8_2:61976828-61976847 Msa1260100:intron 30.0%
ATGTCAAACAAAAGGCAAAA+AGG + chr8_2:61976899-61976918 None:intergenic 30.0%
! GTTCTTTAACTTTGTCTATG+TGG - chr8_2:61976919-61976938 Msa1260100:intron 30.0%
! CGAGTGTTATTAACATGTAA+AGG + chr8_2:61977060-61977079 None:intergenic 30.0%
TGATGATTCAAATCCTACTA+AGG - chr8_2:61977765-61977784 Msa1260100:intron 30.0%
TCAAATCTGTTTGTAAGTCT+TGG - chr8_2:61977813-61977832 Msa1260100:intron 30.0%
GAAAATGTGAATTAGCAAAG+TGG + chr8_2:61977859-61977878 None:intergenic 30.0%
! AACTCGTTCTATAGATTTTG+AGG - chr8_2:61977937-61977956 Msa1260100:intron 30.0%
TTCAAGATCAGAATGAGATT+GGG + chr8_2:61978008-61978027 None:intergenic 30.0%
TTTCAAGATCAGAATGAGAT+TGG + chr8_2:61978009-61978028 None:intergenic 30.0%
CAAAAATATAAAGCCTCTAC+AGG + chr8_2:61978041-61978060 None:intergenic 30.0%
! AGATGGATTCCATAGATAAA+AGG + chr8_2:61978077-61978096 None:intergenic 30.0%
!! GAGACAAAGGTATTTGTTTA+TGG + chr8_2:61978108-61978127 None:intergenic 30.0%
GTTAAGAGATGATTATTTGG+TGG - chr8_2:61978177-61978196 Msa1260100:intron 30.0%
ATGAATATAATCCTAGAGCA+GGG - chr8_2:61978320-61978339 Msa1260100:intron 30.0%
ACCCACAAGTCATAATAATT+AGG + chr8_2:61978478-61978497 None:intergenic 30.0%
! TATTATGACTTGTGGGTATT+TGG - chr8_2:61978481-61978500 Msa1260100:intron 30.0%
AATACAAAATGCATTCGTCT+TGG - chr8_2:61978563-61978582 Msa1260100:intron 30.0%
TTCTATTATGTTCTCTTTGG+TGG - chr8_2:61978894-61978913 Msa1260100:intron 30.0%
ACATATTTCAAAAGCTCATG+TGG + chr8_2:61978974-61978993 None:intergenic 30.0%
CTTAGATTGAAACAGAGAAA+AGG + chr8_2:61979290-61979309 None:intergenic 30.0%
! CTTTTCTCTGTTTCAATCTA+AGG - chr8_2:61979288-61979307 Msa1260100:intron 30.0%
GTATCAAATACTACTATAGG+AGG - chr8_2:61979391-61979410 Msa1260100:intron 30.0%
AGAAATTGTGACTTTCACAA+TGG - chr8_2:61979461-61979480 Msa1260100:CDS 30.0%
! TGCATTCTCTTCTTTGAAAA+AGG + chr8_2:61979602-61979621 None:intergenic 30.0%
ATGTTTGTACTCTTCCATAT+TGG + chr8_2:61979942-61979961 None:intergenic 30.0%
! ATTTGAAGTTGGTTCAATCA+AGG + chr8_2:61980002-61980021 None:intergenic 30.0%
TGACACTAGGAATTATAGAT+GGG + chr8_2:61980148-61980167 None:intergenic 30.0%
! TTTATCCCGTGTCAAATTTT+CGG - chr8_2:61980257-61980276 Msa1260100:intron 30.0%
CTCCATTTCAAATATGCATT+GGG + chr8_2:61980377-61980396 None:intergenic 30.0%
ACTCCATTTCAAATATGCAT+TGG + chr8_2:61980378-61980397 None:intergenic 30.0%
AAGGAAAAAACGTTTGGATT+GGG + chr8_2:61980705-61980724 None:intergenic 30.0%
AAAGGAAAAAACGTTTGGAT+TGG + chr8_2:61980706-61980725 None:intergenic 30.0%
GAATCAATTAGTGAAATGAC+GGG - chr8_2:61980727-61980746 Msa1260100:intron 30.0%
! TCTGTTTCTTTATTTAGGAG+AGG - chr8_2:61980806-61980825 Msa1260100:intron 30.0%
ATTATATAGGATAAGACTGG+TGG + chr8_2:61980836-61980855 None:intergenic 30.0%
TGGATTATATAGGATAAGAC+TGG + chr8_2:61980839-61980858 None:intergenic 30.0%
ATGTACACGTGAGTATATAT+AGG - chr8_2:61981357-61981376 Msa1260100:intron 30.0%
TTGTTATCGTTTAAGGGATT+TGG + chr8_2:61981684-61981703 None:intergenic 30.0%
! TCGTCTTTGTTATCGTTTAA+GGG + chr8_2:61981690-61981709 None:intergenic 30.0%
! ATCGTCTTTGTTATCGTTTA+AGG + chr8_2:61981691-61981710 None:intergenic 30.0%
TAAACGATAACAAAGACGAT+CGG - chr8_2:61981691-61981710 Msa1260100:intron 30.0%
! ATGCTTTTGGATACTTAATC+AGG + chr8_2:61981740-61981759 None:intergenic 30.0%
CAAAGAGATTCAAGATGATT+TGG + chr8_2:61981866-61981885 None:intergenic 30.0%
TCATCTTCTTTGTAGTATTG+AGG + chr8_2:61981985-61982004 None:intergenic 30.0%
GTATACTATGCAAAGAATGA+AGG - chr8_2:61982022-61982041 Msa1260100:intron 30.0%
! TTTCATACATTCTAAGAGAG+AGG + chr8_2:61982153-61982172 None:intergenic 30.0%
! GAGGTAAAAATGCCATTTAA+AGG - chr8_2:61982204-61982223 Msa1260100:intron 30.0%
! TTGTATTTTCCTGCACAAAA+AGG - chr8_2:61982640-61982659 Msa1260100:intron 30.0%
! TGTATTTTCCTGCACAAAAA+GGG - chr8_2:61982641-61982660 Msa1260100:intron 30.0%
! TTTTCAAAAAGATGCTCTGT+TGG - chr8_2:61982802-61982821 Msa1260100:intron 30.0%
! AAGTTTAAGGTATTAGGTGA+AGG + chr8_2:61982876-61982895 None:intergenic 30.0%
! CACCTAATACCTTAAACTTT+TGG - chr8_2:61982877-61982896 Msa1260100:intron 30.0%
! TGCCAAAAGTTTAAGGTATT+AGG + chr8_2:61982882-61982901 None:intergenic 30.0%
! GTTTAGTTTCCATTCTTCAA+TGG - chr8_2:61982969-61982988 Msa1260100:intron 30.0%
TATATCTCTACAAAAATCCC+TGG + chr8_2:61983003-61983022 None:intergenic 30.0%
!!! GGAAAAAGTGTTTCTTGTTT+TGG - chr8_2:61983278-61983297 Msa1260100:CDS 30.0%
ATCGATCATGAATGATATGA+TGG - chr8_2:61983362-61983381 Msa1260100:intron 30.0%
! TGAATGTCTTCCATATTTTG+TGG - chr8_2:61974642-61974661 Msa1260100:CDS 30.0%
TTGTTGTGATCCACAAAATA+TGG + chr8_2:61974655-61974674 None:intergenic 30.0%
ATCATATTTGTGCTATCCAA+CGG + chr8_2:61983513-61983532 None:intergenic 30.0%
TTAATTTACATACCTGAGGA+TGG + chr8_2:61974939-61974958 None:intergenic 30.0%
TGAGACTAACATACTTTAAG+CGG - chr8_2:61984063-61984082 Msa1260100:intron 30.0%
TGAGATGATAAAAGGTTACT+GGG + chr8_2:61984132-61984151 None:intergenic 30.0%
ATGCCAAAAAGTCAATGAAA+AGG - chr8_2:61984281-61984300 Msa1260100:intron 30.0%
!!! TGTCCTTTTCATTGACTTTT+TGG + chr8_2:61984287-61984306 None:intergenic 30.0%
! CAATGAAAAGGACACATTTT+TGG - chr8_2:61984293-61984312 Msa1260100:intron 30.0%
AATAGGTCCTATCACTAAAT+AGG + chr8_2:61984369-61984388 None:intergenic 30.0%
! ATGGAATATGCCATTTAAAG+AGG + chr8_2:61984440-61984459 None:intergenic 30.0%
!! AATGATTCGAATTTTTGGAC+AGG + chr8_2:61984560-61984579 None:intergenic 30.0%
AAGTATGGAGATATTACTCA+GGG + chr8_2:61984693-61984712 None:intergenic 30.0%
ATATTCTTAATGATGCCAGA+AGG - chr8_2:61984805-61984824 Msa1260100:intron 30.0%
! TAGAATTTGAATGATGGGAT+GGG + chr8_2:61984860-61984879 None:intergenic 30.0%
! ATAGAATTTGAATGATGGGA+TGG + chr8_2:61984861-61984880 None:intergenic 30.0%
CTAGTACTTTGGACTAATTA+TGG - chr8_2:61984980-61984999 Msa1260100:intron 30.0%
TCATCACAAAAAACCAAAGA+GGG + chr8_2:61985258-61985277 None:intergenic 30.0%
ATCATCACAAAAAACCAAAG+AGG + chr8_2:61985259-61985278 None:intergenic 30.0%
ATCATCTTTGTGCTATCCAA+CGG + chr8_2:61974769-61974788 None:intergenic 35.0%
AAGCCAAAAAGTCCTTCAAA+AGG - chr8_2:61975548-61975567 Msa1260100:intron 35.0%
!! TGTCCTTTTGAAGGACTTTT+TGG + chr8_2:61975554-61975573 None:intergenic 35.0%
! TACGAAGAATGTCCTTTTGA+AGG + chr8_2:61975563-61975582 None:intergenic 35.0%
GAAATACGTACGAGCATATA+TGG + chr8_2:61975622-61975641 None:intergenic 35.0%
TGGACTTCATCAAAATCTAG+AGG - chr8_2:61975743-61975762 Msa1260100:intron 35.0%
! TCTGGTTTGTGTTTATAGTG+TGG - chr8_2:61975775-61975794 Msa1260100:intron 35.0%
ATAGTATCAATGCACGTTGT+TGG + chr8_2:61975850-61975869 None:intergenic 35.0%
! CGTCCAAAATTTTGAACCAT+TGG - chr8_2:61975998-61976017 Msa1260100:intron 35.0%
ACATTCTTAATGATGCCAGA+AGG - chr8_2:61976236-61976255 Msa1260100:intron 35.0%
AAAAATGCTACATCTCCTTC+TGG + chr8_2:61976254-61976273 None:intergenic 35.0%
TTGCTTCGAAGCTATTACTT+TGG - chr8_2:61976395-61976414 Msa1260100:CDS 35.0%
!! TTCTCTAAAGCATATGACTC+AGG + chr8_2:61976532-61976551 None:intergenic 35.0%
GAAAAAGGGAAAAATGATCC+GGG + chr8_2:61976661-61976680 None:intergenic 35.0%
AGTGTCTCTTGTGCTAATTT+GGG + chr8_2:61976750-61976769 None:intergenic 35.0%
!! GTGGTATTGACTTGAGATAT+GGG + chr8_2:61976773-61976792 None:intergenic 35.0%
GTCGCATGATTATAATCCTT+TGG + chr8_2:61976805-61976824 None:intergenic 35.0%
ATGCGACTGTTATAACTCAA+AGG - chr8_2:61976818-61976837 Msa1260100:intron 35.0%
GAATGAGAATTGACAAAGTG+TGG + chr8_2:61976865-61976884 None:intergenic 35.0%
AGGCTCAAACTTATTTGGTA+TGG - chr8_2:61977120-61977139 Msa1260100:intron 35.0%
AGGTGAACTGAACAATAGAA+AGG + chr8_2:61977515-61977534 None:intergenic 35.0%
GAAATGAAGATCAAGGAAGA+AGG + chr8_2:61977546-61977565 None:intergenic 35.0%
AGAAGCTGAAATGAAGATCA+AGG + chr8_2:61977553-61977572 None:intergenic 35.0%
AAACGTATAAGAGACTTCAC+GGG + chr8_2:61977794-61977813 None:intergenic 35.0%
GAAACGTATAAGAGACTTCA+CGG + chr8_2:61977795-61977814 None:intergenic 35.0%
ATAGAACGAGTTTCAAGATC+TGG + chr8_2:61977929-61977948 None:intergenic 35.0%
ATTGGGGATCCAAAAATCTA+AGG + chr8_2:61977991-61978010 None:intergenic 35.0%
TCAAGATCAGAATGAGATTG+GGG + chr8_2:61978007-61978026 None:intergenic 35.0%
GAAATTAAAGGTTCCTGTAG+AGG - chr8_2:61978025-61978044 Msa1260100:intron 35.0%
! GCTCTTCAACCTTTTATCTA+TGG - chr8_2:61978065-61978084 Msa1260100:intron 35.0%
TATCTATGGAATCCATCTAC+TGG - chr8_2:61978079-61978098 Msa1260100:intron 35.0%
TTGGAATCATTAGGAGACAA+AGG + chr8_2:61978121-61978140 None:intergenic 35.0%
TCTCATTGAGAGATAATACG+TGG - chr8_2:61978257-61978276 Msa1260100:intron 35.0%
CATGAATATAATCCTAGAGC+AGG - chr8_2:61978319-61978338 Msa1260100:intron 35.0%
AATGAATAGCCCCATTAAAG+AGG + chr8_2:61978348-61978367 None:intergenic 35.0%
TCTTTAATGGGGCTATTCAT+TGG - chr8_2:61978347-61978366 Msa1260100:intron 35.0%
! TTGGAGATTTTCTCAGTCTA+TGG - chr8_2:61978500-61978519 Msa1260100:intron 35.0%
! TGGAGATTTTCTCAGTCTAT+GGG - chr8_2:61978501-61978520 Msa1260100:intron 35.0%
! CACATTTTGTACAGCACAAT+GGG + chr8_2:61978639-61978658 None:intergenic 35.0%
GGTGATATTATTGGAACAGA+TGG - chr8_2:61978658-61978677 Msa1260100:intron 35.0%
GATATTATTGGAACAGATGG+TGG - chr8_2:61978661-61978680 Msa1260100:intron 35.0%
TTGGTGAAGTACGATGAAAA+TGG - chr8_2:61978691-61978710 Msa1260100:intron 35.0%
TCCTATTTCAACAATCCATG+TGG - chr8_2:61978733-61978752 Msa1260100:intron 35.0%
! TCCACATGGATTGTTGAAAT+AGG + chr8_2:61978737-61978756 None:intergenic 35.0%
TATCAAGAAAATAGGGAAGG+AGG + chr8_2:61978862-61978881 None:intergenic 35.0%
GTTTATTGGTCAGTTGTTTG+TGG - chr8_2:61979002-61979021 Msa1260100:intron 35.0%
CTCCGTTACAAATTTGATCA+TGG - chr8_2:61979195-61979214 Msa1260100:intron 35.0%
GGCCATGATCAAATTTGTAA+CGG + chr8_2:61979200-61979219 None:intergenic 35.0%
TTGAAACAGAGAAAAGGCAA+GGG + chr8_2:61979284-61979303 None:intergenic 35.0%
ATTGAAACAGAGAAAAGGCA+AGG + chr8_2:61979285-61979304 None:intergenic 35.0%
TGCAAACAGAAGTAGAGAAA+AGG + chr8_2:61979360-61979379 None:intergenic 35.0%
GGATCTCACTTAAAGGTAAA+AGG - chr8_2:61979720-61979739 Msa1260100:intron 35.0%
GGCATACACTACATTCTATT+TGG - chr8_2:61979762-61979781 Msa1260100:intron 35.0%
AATGAGAGCTTCAATCTTCT+TGG - chr8_2:61979810-61979829 Msa1260100:intron 35.0%
! GGGAACTCTTTGGAAATTTA+AGG + chr8_2:61979845-61979864 None:intergenic 35.0%
AGTAAAGTTAGGGAACTCTT+TGG + chr8_2:61979855-61979874 None:intergenic 35.0%
! ACTTTTTGTGCAAAGGCAAA+AGG - chr8_2:61979872-61979891 Msa1260100:intron 35.0%
GTATGGAGTAATTTGGACTT+TGG + chr8_2:61980070-61980089 None:intergenic 35.0%
GATAACAATAGACCAGTGTA+TGG + chr8_2:61980087-61980106 None:intergenic 35.0%
ACACTAGGAATTATAGATGG+GGG + chr8_2:61980146-61980165 None:intergenic 35.0%
GACACTAGGAATTATAGATG+GGG + chr8_2:61980147-61980166 None:intergenic 35.0%
GTGACACTAGGAATTATAGA+TGG + chr8_2:61980149-61980168 None:intergenic 35.0%
TTCAAATTGAGTGTGACACT+AGG + chr8_2:61980161-61980180 None:intergenic 35.0%
TTTGACCGAAAATTTGACAC+GGG + chr8_2:61980265-61980284 None:intergenic 35.0%
CTTTGACCGAAAATTTGACA+CGG + chr8_2:61980266-61980285 None:intergenic 35.0%
! CAAATTTTCGGTCAAAGCAA+AGG - chr8_2:61980269-61980288 Msa1260100:intron 35.0%
CTATTTGTCTTGGTTGTAAG+TGG - chr8_2:61980318-61980337 Msa1260100:intron 35.0%
TGCCCAATGCATATTTGAAA+TGG - chr8_2:61980372-61980391 Msa1260100:intron 35.0%
! AGTGTGTTGTTGAGTAATCT+TGG - chr8_2:61980625-61980644 Msa1260100:intron 35.0%
AGGAAAAAACGTTTGGATTG+GGG + chr8_2:61980704-61980723 None:intergenic 35.0%
!! GTCGTTTTGCCAAAAAAGTA+TGG + chr8_2:61980859-61980878 None:intergenic 35.0%
! AGTCTCTTTTTGTTAACCCA+TGG - chr8_2:61980900-61980919 Msa1260100:intron 35.0%
! GTCTCTTTTTGTTAACCCAT+GGG - chr8_2:61980901-61980920 Msa1260100:intron 35.0%
TTCAGAGATTAGAATCCCAT+GGG + chr8_2:61980919-61980938 None:intergenic 35.0%
ATTCAGAGATTAGAATCCCA+TGG + chr8_2:61980920-61980939 None:intergenic 35.0%
CAGCAAGAACAGTGAAAAAA+AGG + chr8_2:61981120-61981139 None:intergenic 35.0%
CTTGTGATTTAAGCTAACTG+TGG - chr8_2:61981277-61981296 Msa1260100:intron 35.0%
TTATACATCAAAAGCTGACG+TGG + chr8_2:61981317-61981336 None:intergenic 35.0%
! TATATAGGATCGTTTTCCAC+AGG - chr8_2:61981372-61981391 Msa1260100:intron 35.0%
! ATATAGGATCGTTTTCCACA+GGG - chr8_2:61981373-61981392 Msa1260100:intron 35.0%
! TAGAAATAACGATGTCGCTT+TGG + chr8_2:61981638-61981657 None:intergenic 35.0%
! TTTTGGATACTTAATCAGGC+TGG + chr8_2:61981736-61981755 None:intergenic 35.0%
! AAACACAAAGCAAGGTGTTT+AGG + chr8_2:61982109-61982128 None:intergenic 35.0%
TAGTGAATGACCTAAAAGAG+AGG - chr8_2:61982185-61982204 Msa1260100:intron 35.0%
! GGCATTTTTACCTCTCTTTT+AGG + chr8_2:61982198-61982217 None:intergenic 35.0%
AAAAACACAGGCCCTTTAAA+TGG + chr8_2:61982219-61982238 None:intergenic 35.0%
ATTAGCGTAATATGCGCTAT+TGG + chr8_2:61982251-61982270 None:intergenic 35.0%
! TTATTCTACCCTTTTTGTGC+AGG + chr8_2:61982652-61982671 None:intergenic 35.0%
TGCACAAAAAGGGTAGAATA+AGG - chr8_2:61982651-61982670 Msa1260100:intron 35.0%
!! TTGTTTTGCAAGATTCTCCA+TGG + chr8_2:61982720-61982739 None:intergenic 35.0%
TGGCATATTTGTTCACGAAA+TGG - chr8_2:61982897-61982916 Msa1260100:intron 35.0%
GAACTACAACCATTGAAGAA+TGG + chr8_2:61982981-61983000 None:intergenic 35.0%
CAAAAAGCTTGAGCTATTGT+AGG + chr8_2:61983053-61983072 None:intergenic 35.0%
TGCTTCAATCAAACTTGAAC+CGG + chr8_2:61983254-61983273 None:intergenic 35.0%
CAAGTTTGATTGAAGCAAGA+TGG - chr8_2:61983257-61983276 Msa1260100:CDS 35.0%
AACTGACATCTGTCATAGAT+TGG + chr8_2:61983804-61983823 None:intergenic 35.0%
GTGAGATGATAAAAGGTTAC+TGG + chr8_2:61984133-61984152 None:intergenic 35.0%
!!! TTCCTTCAGTTTTAGATGCA+CGG - chr8_2:61984234-61984253 Msa1260100:intron 35.0%
TTTAGATGCACGGTAAGAAA+TGG - chr8_2:61984244-61984263 Msa1260100:intron 35.0%
TTAGATGCACGGTAAGAAAT+GGG - chr8_2:61984245-61984264 Msa1260100:intron 35.0%
GATGAGACCTATTTAGTGAT+AGG - chr8_2:61984359-61984378 Msa1260100:intron 35.0%
TAAAGATGTCTCACATAGGA+GGG + chr8_2:61984629-61984648 None:intergenic 35.0%
TTAAAGATGTCTCACATAGG+AGG + chr8_2:61984630-61984649 None:intergenic 35.0%
CAAGTATGGAGATATTACTC+AGG + chr8_2:61984694-61984713 None:intergenic 35.0%
AAAAGGTCAGGATACAAGTA+TGG + chr8_2:61984708-61984727 None:intergenic 35.0%
TCCATAATTTCAGACTGACT+AGG + chr8_2:61984737-61984756 None:intergenic 35.0%
! AGAATATTGCTCTTTTCCTG+CGG + chr8_2:61984792-61984811 None:intergenic 35.0%
AAAAATGCTACATCTCCTTC+TGG + chr8_2:61976254-61976273 None:intergenic 35.0%
!! TTCTCTAAAGCATATGACTC+AGG + chr8_2:61976532-61976551 None:intergenic 35.0%
GCATATCATTATTCCCTCTT+TGG - chr8_2:61985242-61985261 Msa1260100:CDS 35.0%
TGATAGCAATACTCTTGCTA+TGG - chr8_2:61985275-61985294 Msa1260100:CDS 35.0%
AGTTGAGAATAAGCCTAATG+AGG - chr8_2:61985301-61985320 Msa1260100:CDS 35.0%
AGTATTGCTATCACCTCATT+AGG + chr8_2:61985317-61985336 None:intergenic 35.0%
AGGTGATAGCAATACTCATA+GGG - chr8_2:61985321-61985340 Msa1260100:CDS 35.0%
GGCATTTCTACTTGCATTCA+TGG - chr8_2:61974546-61974565 Msa1260100:three_prime_UTR 40.0%
GATTCAAAAGCAGAGCAACA+TGG + chr8_2:61974688-61974707 None:intergenic 40.0%
! GGATATGGACAATTTTCCGT+TGG - chr8_2:61974750-61974769 Msa1260100:CDS 40.0%
!! CGAGCATATATGGTTGATAG+AGG + chr8_2:61975612-61975631 None:intergenic 40.0%
CCACAACACCAAAAATGTGT+CGG + chr8_2:61975685-61975704 None:intergenic 40.0%
! TTCACAATGATTTGTGTGCG+AGG - chr8_2:61975905-61975924 Msa1260100:intron 40.0%
! TCACAATGATTTGTGTGCGA+GGG - chr8_2:61975906-61975925 Msa1260100:intron 40.0%
TTGTGTGCGAGGGTAAAATT+TGG - chr8_2:61975916-61975935 Msa1260100:intron 40.0%
TGCGAGGGTAAAATTTGGAA+CGG - chr8_2:61975921-61975940 Msa1260100:intron 40.0%
CTGCCGAAAAGGTCAAAATA+TGG + chr8_2:61976154-61976173 None:intergenic 40.0%
! AGAATGTTGCTCTTTTCCTG+CGG + chr8_2:61976223-61976242 None:intergenic 40.0%
GAGTGTCTCTTGTGCTAATT+TGG + chr8_2:61976751-61976770 None:intergenic 40.0%
!! GGTGGTATTGACTTGAGATA+TGG + chr8_2:61976774-61976793 None:intergenic 40.0%
ATACCACCAAACTAACCCAA+AGG - chr8_2:61976786-61976805 Msa1260100:intron 40.0%
!! AATCCTTTGGGTTAGTTTGG+TGG + chr8_2:61976792-61976811 None:intergenic 40.0%
AAAATGCTAACAGGTGTCTC+CGG - chr8_2:61977240-61977259 Msa1260100:intron 40.0%
TGTATCCTTAAGCTGTGATC+CGG + chr8_2:61977262-61977281 None:intergenic 40.0%
ATAAGGGTCATAGTTAACGG+CGG + chr8_2:61977406-61977425 None:intergenic 40.0%
AAGGAATGAGAGAGATAGAG+AGG + chr8_2:61977496-61977515 None:intergenic 40.0%
GATCAAGGAAGAAGGAACAT+GGG + chr8_2:61977538-61977557 None:intergenic 40.0%
AGATCAAGGAAGAAGGAACA+TGG + chr8_2:61977539-61977558 None:intergenic 40.0%
ACTAGGAAGATGAGAAAGAG+TGG + chr8_2:61977594-61977613 None:intergenic 40.0%
TAATTGTCGACGACACAACT+AGG + chr8_2:61977611-61977630 None:intergenic 40.0%
TTAAGAGAGCTCTTCCAACA+TGG + chr8_2:61977697-61977716 None:intergenic 40.0%
TGTTTATGGAGTCCAGTAGA+TGG + chr8_2:61978094-61978113 None:intergenic 40.0%
TAATGGGGCTATTCATTGGT+TGG - chr8_2:61978351-61978370 Msa1260100:intron 40.0%
!! TTTTCTCAGTCTATGGGCTA+TGG - chr8_2:61978507-61978526 Msa1260100:intron 40.0%
ACTCTTGTCCTTCCTATTGA+TGG - chr8_2:61978592-61978611 Msa1260100:intron 40.0%
TTGGAATGCCATCAATAGGA+AGG + chr8_2:61978603-61978622 None:intergenic 40.0%
! TGAGTTGGAATGCCATCAAT+AGG + chr8_2:61978607-61978626 None:intergenic 40.0%
!! AATGGGTAGAAGTACTGAGT+TGG + chr8_2:61978622-61978641 None:intergenic 40.0%
! CCACATTTTGTACAGCACAA+TGG + chr8_2:61978640-61978659 None:intergenic 40.0%
CCATTGTGCTGTACAAAATG+TGG - chr8_2:61978637-61978656 Msa1260100:intron 40.0%
! ATTGGAACAGATGGTGGTAA+TGG - chr8_2:61978667-61978686 Msa1260100:intron 40.0%
!! AACAGATGGTGGTAATGGAT+TGG - chr8_2:61978672-61978691 Msa1260100:intron 40.0%
CAAAAGCTCATGTGGCATAT+CGG + chr8_2:61978966-61978985 None:intergenic 40.0%
TTCTCATTGTGCTCCTTATG+TGG - chr8_2:61979548-61979567 Msa1260100:intron 40.0%
GATGATTTGAGAGAGTTGAG+AGG - chr8_2:61979694-61979713 Msa1260100:intron 40.0%
TTTGAGAGAGTTGAGAGGAT+AGG - chr8_2:61979699-61979718 Msa1260100:intron 40.0%
GAGGATAGGATCTCACTTAA+AGG - chr8_2:61979713-61979732 Msa1260100:intron 40.0%
ATAGAATGTAGTGTATGCCC+TGG + chr8_2:61979761-61979780 None:intergenic 40.0%
ATATAAACCCACCCAAACAC+AGG - chr8_2:61979911-61979930 Msa1260100:intron 40.0%
TATTGGCACATCCTGTGTTT+GGG + chr8_2:61979925-61979944 None:intergenic 40.0%
ATATTGGCACATCCTGTGTT+TGG + chr8_2:61979926-61979945 None:intergenic 40.0%
AAACACAGGATGTGCCAATA+TGG - chr8_2:61979925-61979944 Msa1260100:intron 40.0%
! GAAGTTGGTTCAATCAAGGA+CGG + chr8_2:61979998-61980017 None:intergenic 40.0%
TGGAGTAATTTGGACTTTGG+AGG + chr8_2:61980067-61980086 None:intergenic 40.0%
GTCCAAATTACTCCATACAC+TGG - chr8_2:61980072-61980091 Msa1260100:intron 40.0%
GACCAGTGTATGGAGTAATT+TGG + chr8_2:61980077-61980096 None:intergenic 40.0%
TGTATGTTAAGGCTTGAGAG+TGG - chr8_2:61980181-61980200 Msa1260100:intron 40.0%
! TTTTCGGTCAAAGCAAAGGT+AGG - chr8_2:61980273-61980292 Msa1260100:intron 40.0%
GTTGTAAGTGGAACTTTGAC+AGG - chr8_2:61980330-61980349 Msa1260100:intron 40.0%
TAAGTGGAACTTTGACAGGA+TGG - chr8_2:61980334-61980353 Msa1260100:intron 40.0%
ACTCTGCAAAACCTAACAAC+AGG - chr8_2:61980991-61981010 Msa1260100:intron 40.0%
AGATCGAACTATTTCGCTTG+CGG - chr8_2:61981507-61981526 Msa1260100:intron 40.0%
ATACTTAATCAGGCTGGACA+CGG + chr8_2:61981730-61981749 None:intergenic 40.0%
AAGATCTTTCGTGTCCAAAG+TGG - chr8_2:61982065-61982084 Msa1260100:intron 40.0%
GATTCAACTCAAGACCACTT+TGG + chr8_2:61982082-61982101 None:intergenic 40.0%
CAAGAGAGAAACACAAAGCA+AGG + chr8_2:61982117-61982136 None:intergenic 40.0%
CTTGCTTTGTGTTTCTCTCT+TGG - chr8_2:61982115-61982134 Msa1260100:intron 40.0%
! TGGTATGTTGGCCTATAATC+TGG - chr8_2:61982275-61982294 Msa1260100:intron 40.0%
ATTAGCGTAAAAGCTCCAGA+AGG + chr8_2:61982365-61982384 None:intergenic 40.0%
AAGAAACACGCTATTAGCGT+GGG + chr8_2:61982395-61982414 None:intergenic 40.0%
ATACTGAGCTATTAGCGTAC+AGG + chr8_2:61982465-61982484 None:intergenic 40.0%
ATTAGCGTAGGATACGCTAA+TGG - chr8_2:61982580-61982599 Msa1260100:intron 40.0%
TGTGCAGGAAAATACAAGCA+AGG + chr8_2:61982637-61982656 None:intergenic 40.0%
CGAAATGGTATCACATTCAC+AGG - chr8_2:61982912-61982931 Msa1260100:intron 40.0%
! ATTCACAGGCTTTGATCAAG+TGG - chr8_2:61982926-61982945 Msa1260100:intron 40.0%
! TTCACAGGCTTTGATCAAGT+GGG - chr8_2:61982927-61982946 Msa1260100:intron 40.0%
TCTTCAATGGTTGTAGTTCC+AGG - chr8_2:61982982-61983001 Msa1260100:intron 40.0%
CTTCAATGGTTGTAGTTCCA+GGG - chr8_2:61982983-61983002 Msa1260100:intron 40.0%
GTAGGTGGAAAACACGTAAA+TGG + chr8_2:61983035-61983054 None:intergenic 40.0%
AAAGCTTGAGCTATTGTAGG+TGG + chr8_2:61983050-61983069 None:intergenic 40.0%
!! GGTGCAAAAAAAGCATTCGA+TGG + chr8_2:61983321-61983340 None:intergenic 40.0%
GATTCAAAAGCAGAGCAACA+TGG + chr8_2:61974688-61974707 None:intergenic 40.0%
! GGATATGGACAATTTTCCGT+TGG - chr8_2:61974750-61974769 Msa1260100:CDS 40.0%
ACGTCTGTTTGTGTTGTGTT+TGG - chr8_2:61983887-61983906 Msa1260100:intron 40.0%
ATACTTTAAGCGGAGAAGAG+TGG - chr8_2:61984073-61984092 Msa1260100:intron 40.0%
! TACCGTGCATCTAAAACTGA+AGG + chr8_2:61984239-61984258 None:intergenic 40.0%
GGTAAGAAATGGGATTGTTG+AGG - chr8_2:61984255-61984274 Msa1260100:intron 40.0%
ATGTTCCGTGTCCAATCTAA+TGG - chr8_2:61984658-61984677 Msa1260100:intron 40.0%
TATGGAGATATTACTCAGGG+CGG + chr8_2:61984690-61984709 None:intergenic 40.0%
! GCCTAGTCAGTCTGAAATTA+TGG - chr8_2:61984733-61984752 Msa1260100:intron 40.0%
! TCTGAAATTATGGAGCTCAG+TGG - chr8_2:61984743-61984762 Msa1260100:intron 40.0%
! TTTGAATGATGGGATGGGAT+GGG + chr8_2:61984855-61984874 None:intergenic 40.0%
! ATTTGAATGATGGGATGGGA+TGG + chr8_2:61984856-61984875 None:intergenic 40.0%
TGCTTTCGAAGCTAGTACTT+TGG - chr8_2:61984969-61984988 Msa1260100:intron 40.0%
GAGGTGATAGCAATACTCAT+AGG - chr8_2:61985320-61985339 Msa1260100:CDS 40.0%
! GGTGCAAACAAAGCATTCGA+TGG + chr8_2:61974577-61974596 None:intergenic 45.0%
ATCGATCTGCAGTTCGTAGT+TGG + chr8_2:61974604-61974623 None:intergenic 45.0%
! ATGAAGTTGCCTGCTGTTTG+TGG - chr8_2:61974787-61974806 Msa1260100:intron 45.0%
! GCAATCACATGTATCGGTGT+CGG + chr8_2:61975081-61975100 None:intergenic 45.0%
TCGTACGTATTTCCTCAGCA+TGG - chr8_2:61975629-61975648 Msa1260100:intron 45.0%
ATTTCCTCAGCATGGATACG+TGG - chr8_2:61975637-61975656 Msa1260100:intron 45.0%
! GTGGAGTACTTTGTGAACTC+AGG - chr8_2:61975656-61975675 Msa1260100:intron 45.0%
! TCAGGAGACCGACACATTTT+TGG - chr8_2:61975674-61975693 Msa1260100:intron 45.0%
!!! CCGACACATTTTTGGTGTTG+TGG - chr8_2:61975682-61975701 Msa1260100:intron 45.0%
TGGACTCTAACCGTCGTAAT+TGG - chr8_2:61975702-61975721 Msa1260100:intron 45.0%
ATCTAGAGGCTCATTGTCTC+TGG - chr8_2:61975757-61975776 Msa1260100:intron 45.0%
! GCGAGGGTAAAATTTGGAAC+GGG - chr8_2:61975922-61975941 Msa1260100:intron 45.0%
GCCTTATACTGGTAGCCATT+GGG + chr8_2:61976201-61976220 None:intergenic 45.0%
! CATGATTGGGTTGTGGCTTT+GGG + chr8_2:61976594-61976613 None:intergenic 45.0%
! CTTTGAGCATGATTGGGTTG+TGG + chr8_2:61976601-61976620 None:intergenic 45.0%
GGGGAACTTTGAGCATGATT+GGG + chr8_2:61976607-61976626 None:intergenic 45.0%
TGGGGAACTTTGAGCATGAT+TGG + chr8_2:61976608-61976627 None:intergenic 45.0%
!! TTGAACTGGTACTGATGCTG+GGG + chr8_2:61976626-61976645 None:intergenic 45.0%
!! CTTGAACTGGTACTGATGCT+GGG + chr8_2:61976627-61976646 None:intergenic 45.0%
!! ACTTGAACTGGTACTGATGC+TGG + chr8_2:61976628-61976647 None:intergenic 45.0%
AGCATCAGTACCAGTTCAAG+TGG - chr8_2:61976627-61976646 Msa1260100:intron 45.0%
! GGATTATCTGCCACTTGAAC+TGG + chr8_2:61976640-61976659 None:intergenic 45.0%
GTTCAAGTGGCAGATAATCC+CGG - chr8_2:61976640-61976659 Msa1260100:intron 45.0%
GAATGAGAGAGATAGAGAGG+AGG + chr8_2:61977493-61977512 None:intergenic 45.0%
GGAAGATGAGAAAGAGTGGA+GGG + chr8_2:61977590-61977609 None:intergenic 45.0%
AGGAAGATGAGAAAGAGTGG+AGG + chr8_2:61977591-61977610 None:intergenic 45.0%
! ATGGTCAATCCTTTGAGAGC+TGG + chr8_2:61977664-61977683 None:intergenic 45.0%
TTCATGAGGCAGATGCATGA+TGG + chr8_2:61977744-61977763 None:intergenic 45.0%
TTAAAGAGGAACCCTGCTCT+AGG + chr8_2:61978334-61978353 None:intergenic 45.0%
AGAGCAGGGTTCCTCTTTAA+TGG - chr8_2:61978334-61978353 Msa1260100:intron 45.0%
GAGCAGGGTTCCTCTTTAAT+GGG - chr8_2:61978335-61978354 Msa1260100:intron 45.0%
AGCAGGGTTCCTCTTTAATG+GGG - chr8_2:61978336-61978355 Msa1260100:intron 45.0%
TCTCAGTATACATAGCCGCT+CGG + chr8_2:61978762-61978781 None:intergenic 45.0%
! TCTTTGGTGGCTGCATTTGT+TGG - chr8_2:61978907-61978926 Msa1260100:intron 45.0%
! CTTTGGTGGCTGCATTTGTT+GGG - chr8_2:61978908-61978927 Msa1260100:intron 45.0%
ATTGTGCTCCTTATGTGGTG+AGG - chr8_2:61979553-61979572 Msa1260100:intron 45.0%
TGCAATGTCCTCACCACATA+AGG + chr8_2:61979564-61979583 None:intergenic 45.0%
ATGCTCTGTTGGATTCGTGA+TGG - chr8_2:61980479-61980498 Msa1260100:intron 45.0%
TGATTTAACGCAACTCCCTG+TGG + chr8_2:61981391-61981410 None:intergenic 45.0%
TGGCGTAGGTACAAAAACAC+AGG + chr8_2:61982231-61982250 None:intergenic 45.0%
GTAATATGCGCTATTGGCGT+AGG + chr8_2:61982245-61982264 None:intergenic 45.0%
CGCATATTACGCTAATAGCG+TGG - chr8_2:61982255-61982274 Msa1260100:intron 45.0%
ACGCTAATAGCGTGGTATGT+TGG - chr8_2:61982263-61982282 Msa1260100:intron 45.0%
TTGGCCTATAATCTGGCCAA+TGG - chr8_2:61982282-61982301 Msa1260100:intron 45.0%
TGGCCTATAATCTGGCCAAT+GGG - chr8_2:61982283-61982302 Msa1260100:intron 45.0%
AAGCCCATTGGCCAGATTAT+AGG + chr8_2:61982289-61982308 None:intergenic 45.0%
GAAGAAACACGCTATTAGCG+TGG + chr8_2:61982396-61982415 None:intergenic 45.0%
AGGTCAGAAAGATACGCCAA+TGG + chr8_2:61982539-61982558 None:intergenic 45.0%
TTGGCGTATCTTTCTGACCT+TGG - chr8_2:61982539-61982558 Msa1260100:intron 45.0%
GCGTGATGAAGAAATGTCCA+AGG + chr8_2:61982559-61982578 None:intergenic 45.0%
CTTCATCACGCTATTAGCGT+AGG - chr8_2:61982568-61982587 Msa1260100:intron 45.0%
! TCACAGGCTTTGATCAAGTG+GGG - chr8_2:61982928-61982947 Msa1260100:intron 45.0%
! TCATCTGAGCTGAGTTTGCT+TGG - chr8_2:61983095-61983114 Msa1260100:intron 45.0%
ATCGATCTGCAGCTTGTAGT+TGG + chr8_2:61983348-61983367 None:intergenic 45.0%
! ATGAAGTTGCCTGCTGTTTG+TGG - chr8_2:61974787-61974806 Msa1260100:intron 45.0%
! ACAATCACATGCATCGGTGT+CGG + chr8_2:61983828-61983847 None:intergenic 45.0%
ATTACTGCTCCTAGATCCCT+CGG + chr8_2:61984321-61984340 None:intergenic 45.0%
AGGGATCTAGGAGCAGTAAT+TGG - chr8_2:61984321-61984340 Msa1260100:intron 45.0%
AGATTGGACACGGAACATGT+TGG + chr8_2:61984656-61984675 None:intergenic 45.0%
GATGGCCATTAGATTGGACA+CGG + chr8_2:61984666-61984685 None:intergenic 45.0%
ACTAGGCTTTCGAAAAGGTC+AGG + chr8_2:61984720-61984739 None:intergenic 45.0%
GACTGACTAGGCTTTCGAAA+AGG + chr8_2:61984725-61984744 None:intergenic 45.0%
! CATGATTGGGTTGTGGCTTT+GGG + chr8_2:61976594-61976613 None:intergenic 45.0%
TCTAAACTGTCATCTGCCAC+TGG + chr8_2:61985220-61985239 None:intergenic 45.0%
GTGGCAGATGACAGTTTAGA+CGG - chr8_2:61985220-61985239 Msa1260100:CDS 45.0%
!! AAATTAAAATAAAATAGAAT+TGG - chr8_2:61984182-61984201 Msa1260100:intron 5.0%
CTGCAGTTCGTAGTTGGAGT+TGG + chr8_2:61974598-61974617 None:intergenic 50.0%
TCTGTTGCAGCAACTGCTTC+TGG - chr8_2:61974706-61974725 Msa1260100:CDS 50.0%
AGTGAGACTCCACAAACAGC+AGG + chr8_2:61974799-61974818 None:intergenic 50.0%
! GCACTGACACTTCTGATCGA+AGG - chr8_2:61975021-61975040 Msa1260100:intron 50.0%
TACTCCACGTATCCATGCTG+AGG + chr8_2:61975644-61975663 None:intergenic 50.0%
CCTTGGAATGGACATGGAAC+CGG + chr8_2:61976099-61976118 None:intergenic 50.0%
CGGTTCCATGTCCATTCCAA+GGG - chr8_2:61976097-61976116 Msa1260100:intron 50.0%
! CCTAGTCCGTCGGAAAGTAT+GGG - chr8_2:61976174-61976193 Msa1260100:intron 50.0%
! CTAGTCCGTCGGAAAGTATG+GGG - chr8_2:61976175-61976194 Msa1260100:intron 50.0%
GCCCAATGGCTACCAGTATA+AGG - chr8_2:61976197-61976216 Msa1260100:intron 50.0%
! GGCCTTATACTGGTAGCCAT+TGG + chr8_2:61976202-61976221 None:intergenic 50.0%
!! CTTTTCCTGCGGCCTTATAC+TGG + chr8_2:61976212-61976231 None:intergenic 50.0%
! GCATGATTGGGTTGTGGCTT+TGG + chr8_2:61976595-61976614 None:intergenic 50.0%
TGTCTCCGGATCACAGCTTA+AGG - chr8_2:61977254-61977273 Msa1260100:intron 50.0%
CAAGGAAGAAGGAACATGGG+AGG + chr8_2:61977535-61977554 None:intergenic 50.0%
GCTGGAAGTTGAGACTTGTG+AGG + chr8_2:61977640-61977659 None:intergenic 50.0%
! AATCCTTTGAGAGCTGGTGC+TGG + chr8_2:61977658-61977677 None:intergenic 50.0%
ACTTCACGGGCAACCTTAGT+AGG + chr8_2:61977781-61977800 None:intergenic 50.0%
CTCAGTATACATAGCCGCTC+GGG + chr8_2:61978761-61978780 None:intergenic 50.0%
! AAGCTTGCTCATTGCCACCA+GGG + chr8_2:61978798-61978817 None:intergenic 50.0%
! TAAGCTTGCTCATTGCCACC+AGG + chr8_2:61978799-61978818 None:intergenic 50.0%
GTGGTGAGGACATTGCAAGT+AGG - chr8_2:61979567-61979586 Msa1260100:intron 50.0%
! TGGACTTTGGAGGAGTGTGT+GGG + chr8_2:61980057-61980076 None:intergenic 50.0%
! TTGGACTTTGGAGGAGTGTG+TGG + chr8_2:61980058-61980077 None:intergenic 50.0%
TTGACAGGATGGCAAGATGC+AGG - chr8_2:61980345-61980364 Msa1260100:intron 50.0%
ACGCTAATGGCGTATCCTTC+TGG - chr8_2:61982347-61982366 Msa1260100:intron 50.0%
CTATTAGCGTACAGGCTCCA+GGG + chr8_2:61982457-61982476 None:intergenic 50.0%
GTAGGATACGCTAATGGCGT+AGG - chr8_2:61982586-61982605 Msa1260100:intron 50.0%
CTGCAGCTTGTAGTTGGAGT+TGG + chr8_2:61983342-61983361 None:intergenic 50.0%
TCTGTTGCAGCAACTGCTTC+TGG - chr8_2:61974706-61974725 Msa1260100:CDS 50.0%
AGTGAGACTCCACAAACAGC+AGG + chr8_2:61974799-61974818 None:intergenic 50.0%
! GCACTGATGCTTCTGATCGA+AGG - chr8_2:61983768-61983787 Msa1260100:intron 50.0%
!!! AGGACACATTTTTGGTGCCG+AGG - chr8_2:61984301-61984320 Msa1260100:intron 50.0%
!!! GGACACATTTTTGGTGCCGA+GGG - chr8_2:61984302-61984321 Msa1260100:intron 50.0%
!!! TTTTTGGTGCCGAGGGATCT+AGG - chr8_2:61984309-61984328 Msa1260100:intron 50.0%
GATATTACTCAGGGCGGAGA+TGG + chr8_2:61984684-61984703 None:intergenic 50.0%
TTATGGAGCTCAGTGGCTAC+CGG - chr8_2:61984750-61984769 Msa1260100:intron 50.0%
! CCATGATTGGGTTGTGGCTT+TGG + chr8_2:61985169-61985188 None:intergenic 50.0%
CCAAAGCCACAACCCAATCA+TGG - chr8_2:61976592-61976611 Msa1260100:intron 50.0%
! CTTGGACCATGATTGGGTTG+TGG + chr8_2:61985175-61985194 None:intergenic 50.0%
GGGGAACTTGGACCATGATT+GGG + chr8_2:61985181-61985200 None:intergenic 50.0%
TGGGGAACTTGGACCATGAT+TGG + chr8_2:61985182-61985201 None:intergenic 50.0%
!! TGGAACTGGTACTGATGCTG+GGG + chr8_2:61985200-61985219 None:intergenic 50.0%
!! CTGGAACTGGTACTGATGCT+GGG + chr8_2:61985201-61985220 None:intergenic 50.0%
!! ACTGGAACTGGTACTGATGC+TGG + chr8_2:61985202-61985221 None:intergenic 50.0%
AGCATCAGTACCAGTTCCAG+TGG - chr8_2:61985201-61985220 Msa1260100:CDS 50.0%
GTTACTGCTGCTCCATCCTC+AGG - chr8_2:61974924-61974943 Msa1260100:intron 55.0%
AGACTCGCACACTCCAAGAG+TGG - chr8_2:61975337-61975356 Msa1260100:intron 55.0%
GGTGGGGAGTTTGAGTCCAA+TGG + chr8_2:61976017-61976036 None:intergenic 55.0%
GGAATGGACATGGAACCGGT+TGG + chr8_2:61976095-61976114 None:intergenic 55.0%
CCGGTTCCATGTCCATTCCA+AGG - chr8_2:61976096-61976115 Msa1260100:intron 55.0%
! TTTTCGGCAGCCTAGTCCGT+CGG - chr8_2:61976164-61976183 Msa1260100:intron 55.0%
GCCTAGTCCGTCGGAAAGTA+TGG - chr8_2:61976173-61976192 Msa1260100:intron 55.0%
! CCCATACTTTCCGACGGACT+AGG + chr8_2:61976177-61976196 None:intergenic 55.0%
TTGGGCCCCATACTTTCCGA+CGG + chr8_2:61976183-61976202 None:intergenic 55.0%
! TCGGAAAGTATGGGGCCCAA+TGG - chr8_2:61976183-61976202 Msa1260100:CDS 55.0%
!! GGCTTTGGGCTACTCTGTGA+AGG + chr8_2:61976580-61976599 None:intergenic 55.0%
CTTCCAGCACCAGCTCTCAA+AGG - chr8_2:61977652-61977671 Msa1260100:intron 55.0%
! CCAACATGGACTGCGATCGA+TGG + chr8_2:61977683-61977702 None:intergenic 55.0%
CCATCGATCGCAGTCCATGT+TGG - chr8_2:61977680-61977699 Msa1260100:intron 55.0%
CAATCCATGTGGATCCCGAG+CGG - chr8_2:61978744-61978763 Msa1260100:intron 55.0%
GAGACTCTGCTTTCACTCCC+TGG - chr8_2:61978778-61978797 Msa1260100:intron 55.0%
ACTCTGCTTTCACTCCCTGG+TGG - chr8_2:61978781-61978800 Msa1260100:intron 55.0%
GGCACATCCTGTGTTTGGGT+GGG + chr8_2:61979921-61979940 None:intergenic 55.0%
TGGCACATCCTGTGTTTGGG+TGG + chr8_2:61979922-61979941 None:intergenic 55.0%
! GTGTGTGGGGAGTGTATTGG+TGG + chr8_2:61980043-61980062 None:intergenic 55.0%
! GGAGTGTGTGGGGAGTGTAT+TGG + chr8_2:61980046-61980065 None:intergenic 55.0%
! GGACTTTGGAGGAGTGTGTG+GGG + chr8_2:61980056-61980075 None:intergenic 55.0%
ACAGGATGGCAAGATGCAGG+AGG - chr8_2:61980348-61980367 Msa1260100:intron 55.0%
!! CGATGTCGCTTTGGACACGA+AGG + chr8_2:61981629-61981648 None:intergenic 55.0%
GTAGCTGGAGCGTAGAAGCA+GGG + chr8_2:61982329-61982348 None:intergenic 55.0%
CTACGCTCCAGCTACGCTAA+TGG - chr8_2:61982334-61982353 Msa1260100:intron 55.0%
GGATACGCCATTAGCGTAGC+TGG + chr8_2:61982344-61982363 None:intergenic 55.0%
TTCATGACCAGCTTCGCTCC+AGG - chr8_2:61982413-61982432 Msa1260100:intron 55.0%
GCTATTAGCGTACAGGCTCC+AGG + chr8_2:61982458-61982477 None:intergenic 55.0%
GGCGGAGATGGCCATTAGAT+TGG + chr8_2:61984672-61984691 None:intergenic 55.0%
! CGGCTTTATACCCGCCATTC+CGG + chr8_2:61984772-61984791 None:intergenic 55.0%
!! AATGGCGGGTATAAAGCCGC+AGG - chr8_2:61984773-61984792 Msa1260100:intron 55.0%
!! GGCTTTGGGCTACTCTGTGA+AGG + chr8_2:61976580-61976599 None:intergenic 55.0%
!! GGTACTGATGCTGGGGAACT+TGG + chr8_2:61976619-61976638 None:intergenic 55.0%
CTGTCATCTGCCACTGGAAC+TGG + chr8_2:61985214-61985233 None:intergenic 55.0%
GGTGGCCCTTGGAATGGACA+TGG + chr8_2:61976105-61976124 None:intergenic 60.0%
TCAGTACTACTCCCGCGCAG+AGG + chr8_2:61976126-61976145 None:intergenic 60.0%
!! GACGGACTAGGCTGCCGAAA+AGG + chr8_2:61976165-61976184 None:intergenic 60.0%
GGCTACCAGTATAAGGCCGC+AGG - chr8_2:61976204-61976223 Msa1260100:intron 60.0%
ATAGCCGCTCGGGATCCACA+TGG + chr8_2:61978751-61978770 None:intergenic 60.0%
CCAACGTGGCACAAGCCCAT+TGG + chr8_2:61982301-61982320 None:intergenic 60.0%
! CCAATGGGCTTGTGCCACGT+TGG - chr8_2:61982298-61982317 Msa1260100:intron 60.0%
TGGAGCGTAGAAGCAGGGCA+AGG + chr8_2:61982324-61982343 None:intergenic 60.0%
CGTAGCTGGAGCGTAGAAGC+AGG + chr8_2:61982330-61982349 None:intergenic 60.0%
CTTCGCTCCAGGTGCGCTAA+TGG - chr8_2:61982424-61982443 Msa1260100:intron 60.0%
AGCTACGCCATTAGCGCACC+TGG + chr8_2:61982434-61982453 None:intergenic 60.0%
ATACGCCAATGGCGCACCTG+GGG + chr8_2:61982528-61982547 None:intergenic 60.0%
GATACGCCAATGGCGCACCT+GGG + chr8_2:61982529-61982548 None:intergenic 60.0%
AGATACGCCAATGGCGCACC+TGG + chr8_2:61982530-61982549 None:intergenic 60.0%
! GCTAGTGCTGCTCCATCCTC+AGG - chr8_2:61983671-61983690 Msa1260100:intron 60.0%
GAGCTCAGTGGCTACCGGAA+TGG - chr8_2:61984755-61984774 Msa1260100:intron 60.0%
CTCAGTGGCTACCGGAATGG+CGG - chr8_2:61984758-61984777 Msa1260100:intron 60.0%
TCAGTGGCTACCGGAATGGC+GGG - chr8_2:61984759-61984778 Msa1260100:intron 60.0%
CGCAGAGGTGGCCCTTGGAA+TGG + chr8_2:61976111-61976130 None:intergenic 65.0%
TTCCAAGGGCCACCTCTGCG+CGG - chr8_2:61976111-61976130 Msa1260100:intron 65.0%
GTACTACTCCCGCGCAGAGG+TGG + chr8_2:61976123-61976142 None:intergenic 65.0%
GAAGCAGGGCAAGGCCAACG+TGG + chr8_2:61982315-61982334 None:intergenic 65.0%
TAGCGCACCTGGAGCGAAGC+TGG + chr8_2:61982423-61982442 None:intergenic 65.0%
GCGCTAATGGCGTAGCTCCC+TGG - chr8_2:61982437-61982456 Msa1260100:intron 65.0%
GTGCTTCAGATCCACGCCCC+AGG - chr8_2:61982509-61982528 Msa1260100:intron 65.0%
TCCAAGGGCCACCTCTGCGC+GGG - chr8_2:61976112-61976131 Msa1260100:intron 70.0%
TCCCGCGCAGAGGTGGCCCT+TGG + chr8_2:61976116-61976135 None:intergenic 75.0%
CCAATGGCGCACCTGGGGCG+TGG + chr8_2:61982523-61982542 None:intergenic 75.0%
CCACGCCCCAGGTGCGCCAT+TGG - chr8_2:61982520-61982539 Msa1260100:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 61974505 61985367 61974505 ID=Msa1260100;Name=Msa1260100
chr8_2 mRNA 61974505 61985367 61974505 ID=Msa1260100-mRNA-1;Parent=Msa1260100;Name=Msa1260100-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.2|0.33|0.83|0.8|0.83|6|61|358
chr8_2 exon 61974505 61974777 61974505 ID=Msa1260100-mRNA-1:exon:19639;Parent=Msa1260100-mRNA-1
chr8_2 exon 61976180 61976206 61976180 ID=Msa1260100-mRNA-1:exon:19638;Parent=Msa1260100-mRNA-1
chr8_2 exon 61976299 61976596 61976299 ID=Msa1260100-mRNA-1:exon:19637;Parent=Msa1260100-mRNA-1
chr8_2 exon 61979419 61979520 61979419 ID=Msa1260100-mRNA-1:exon:19636;Parent=Msa1260100-mRNA-1
chr8_2 exon 61983239 61983351 61983239 ID=Msa1260100-mRNA-1:exon:19635;Parent=Msa1260100-mRNA-1
chr8_2 exon 61985043 61985367 61985043 ID=Msa1260100-mRNA-1:exon:19634;Parent=Msa1260100-mRNA-1
chr8_2 CDS 61985043 61985367 61985043 ID=Msa1260100-mRNA-1:cds;Parent=Msa1260100-mRNA-1
chr8_2 CDS 61983239 61983351 61983239 ID=Msa1260100-mRNA-1:cds;Parent=Msa1260100-mRNA-1
chr8_2 CDS 61979419 61979520 61979419 ID=Msa1260100-mRNA-1:cds;Parent=Msa1260100-mRNA-1
chr8_2 CDS 61976299 61976596 61976299 ID=Msa1260100-mRNA-1:cds;Parent=Msa1260100-mRNA-1
chr8_2 CDS 61976180 61976206 61976180 ID=Msa1260100-mRNA-1:cds;Parent=Msa1260100-mRNA-1
chr8_2 CDS 61974566 61974777 61974566 ID=Msa1260100-mRNA-1:cds;Parent=Msa1260100-mRNA-1
chr8_2 three_prime_UTR 61974505 61974565 61974505 ID=Msa1260100-mRNA-1:three_prime_utr;Parent=Msa1260100-mRNA-1
Gene Sequence

>Msa1260100

ATGCAGGACTCTGAAGCGATGAAAACATTTGTTACTGTTCTGGCATTTCTACTTGCATTCATGGCATTTCCATCGAATGCTTTGTTTGCACCAACTCCAACTACGAACTGCAGATCGATTTTGAATGATATGATGGTTGAATGTCTTCCATATTTTGTGGATCACAACAATAATTCTCAACCATGTTGCTCTGCTTTTGAATCTGTTGCAGCAACTGCTTCTGGCTGCATTTGTGATATTCATATGGATATGGACAATTTTCCGTTGGATAGCACAAAGATGATGAAGTTGCCTGCTGTTTGTGGAGTCTCACTCCCTTGTCACTTTGATGCACCTGAGTCATATGCTTTAGAGAATTTGATTTCAAGCTCATCACAGTCTCCTTCACAGAGTAGCCCAAAGCCACAACCCAATCATGCTCAAAGTTCCCCAGCATCAGATGGCAAGATGCAGGAGGATGCCCAATGCATATTTGAAATGGAGTTAGAAGACATTTTTGAATTTGCAGATGATGACAAGAAATATTATAGCGTTGTATTCATGGAAAAAGTGTTTCTTGTTTTGGCATTTTTACTTGCATTTCCATCGAATGCTTTTTTTGCACCAACTCCAACTACAAGCTGCAGATCGATCATGAATGATATGATGGTTGAATGTCTTCCATATTTTGTGGATCACAACAATAATTCTCAACCATGTTGCTCTGCTTTTGAATCTGTTGCAGCAACTGCTTCTGGTTGCATTTGTGATATTCATATGGATATGGACAATTTTCCGTTGGATAGCACAAATATGATGAAGTTGCCTGCTGTTTGTGGAGTCTCACTCCCTTGTCACTTGGATGCTAGTGCTGCTCCATCCTCAGTTGATGCACCTGAGTCATATGCTTTAGAGAATTTGATTTCAAGCTCATCACAGTCTCCTTCACAGAGTAGCCCAAAGCCACAACCCAATCATGGTCCAAGTTCCCCAGCATCAGTACCAGTTCCAGTGGCAGATGACAGTTTAGACGGCATATCATTATTCCCTCTTTGGTTTTTTGTGATGATAGCAATACTCTTGCTATGGAAAAGTTGA

Protein sequence

>Msa1260100

MQDSEAMKTFVTVLAFLLAFMAFPSNALFAPTPTTNCRSILNDMMVECLPYFVDHNNNSQPCCSAFESVAATASGCICDIHMDMDNFPLDSTKMMKLPAVCGVSLPCHFDAPESYALENLISSSSQSPSQSSPKPQPNHAQSSPASDGKMQEDAQCIFEMELEDIFEFADDDKKYYSVVFMEKVFLVLAFLLAFPSNAFFAPTPTTSCRSIMNDMMVECLPYFVDHNNNSQPCCSAFESVAATASGCICDIHMDMDNFPLDSTNMMKLPAVCGVSLPCHLDASAAPSSVDAPESYALENLISSSSQSPSQSSPKPQPNHGPSSPASVPVPVADDSLDGISLFPLWFFVMIAILLLWKS*