AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1052330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1052330 MtrunA17_Chr6g0475491 70.933 461 76 5 1 405 1 459 0.0 626
Msa1052330 MtrunA17_Chr8g0338621 68.627 459 89 3 1 405 1 458 0.0 620
Msa1052330 MtrunA17_Chr7g0218941 68.928 457 87 3 1 403 1 456 0.0 606
Msa1052330 MtrunA17_Chr8g0346831 66.449 459 96 6 1 404 1 456 0.0 595
Msa1052330 MtrunA17_Chr8g0337891 66.376 458 98 5 1 405 1 455 0.0 592
Msa1052330 MtrunA17_Chr6g0471941 64.629 458 106 5 1 405 1 455 0.0 571
Msa1052330 MtrunA17_Chr8g0338261 63.216 454 111 4 1 400 1 452 0.0 556
Msa1052330 MtrunA17_Chr8g0338251 63.755 458 96 5 1 404 1 442 0.0 552
Msa1052330 MtrunA17_Chr8g0338391 63.239 457 111 6 1 404 1 453 0.0 549
Msa1052330 MtrunA17_Chr8g0338671 66.667 342 58 4 119 405 1 341 1.44e-151 441
Msa1052330 MtrunA17_Chr8g0352211 56.455 457 143 5 1 405 1001 1453 2.95e-146 457
Msa1052330 MtrunA17_Chr2g0316291 49.460 463 172 8 1 404 1 460 5.48e-136 416
Msa1052330 MtrunA17_Chr8g0338361 62.539 323 66 3 137 405 1 322 3.26e-131 387
Msa1052330 MtrunA17_Chr8g0338681 77.049 183 42 0 223 405 52 234 5.74e-102 302
Msa1052330 MtrunA17_Chr3g0082871 37.079 445 225 9 8 402 3 442 1.49e-81 264
Msa1052330 MtrunA17_Chr4g0051651 35.408 466 229 11 8 404 26 488 4.83e-77 251
Msa1052330 MtrunA17_Chr5g0430621 34.267 464 219 11 1 399 1 443 3.42e-76 255
Msa1052330 MtrunA17_Chr3g0082881 36.364 451 224 11 8 404 3 444 2.46e-73 245
Msa1052330 MtrunA17_Chr3g0082891 35.955 445 230 9 8 402 3 442 2.72e-73 245
Msa1052330 MtrunA17_Chr5g0429961 32.816 451 223 10 13 399 9 443 6.52e-73 246
Msa1052330 MtrunA17_Chr5g0430721 34.199 462 222 10 1 399 42 484 9.45e-73 246
Msa1052330 MtrunA17_Chr5g0429951 33.632 446 218 8 17 399 13 443 1.68e-72 244
Msa1052330 MtrunA17_Chr1g0155991 33.333 462 223 10 1 399 1 440 6.37e-72 243
Msa1052330 MtrunA17_Chr5g0430291 33.333 450 222 8 13 399 9 443 8.02e-72 243
Msa1052330 MtrunA17_Chr8g0351821 34.163 442 221 9 11 395 7 435 2.74e-71 231
Msa1052330 MtrunA17_Chr3g0089501 34.821 448 228 9 12 402 15 455 2.88e-71 239
Msa1052330 MtrunA17_Chr3g0089431 33.843 458 223 12 12 402 17 461 4.53e-71 230
Msa1052330 MtrunA17_Chr4g0071021 32.747 455 211 10 8 399 4 426 1.09e-70 229
Msa1052330 MtrunA17_Chr3g0087841 34.658 453 228 11 12 405 17 460 1.51e-70 240
Msa1052330 MtrunA17_Chr5g0430951 32.230 453 222 10 13 399 9 442 1.66e-70 238
Msa1052330 MtrunA17_Chr4g0027251 33.784 444 216 9 15 395 11 439 1.78e-70 239
Msa1052330 MtrunA17_Chr5g0430641 32.594 451 224 9 13 399 9 443 1.94e-70 239
Msa1052330 MtrunA17_Chr1g0155321 32.667 450 220 8 13 399 9 438 1.14e-69 237
Msa1052330 MtrunA17_Chr7g0244231 32.444 450 221 8 13 399 9 438 2.19e-69 236
Msa1052330 MtrunA17_Chr5g0414231 31.416 452 243 10 8 399 4 448 4.70e-69 226
Msa1052330 MtrunA17_Chr2g0309721 32.900 462 240 10 1 402 6 457 6.78e-69 236
Msa1052330 MtrunA17_Chr3g0089601 34.375 448 230 9 12 402 15 455 7.40e-69 234
Msa1052330 MtrunA17_Chr1g0189551 34.273 461 232 11 1 399 29 480 1.19e-68 233
Msa1052330 MtrunA17_Chr5g0430581 31.567 453 220 10 13 399 9 437 1.29e-68 234
Msa1052330 MtrunA17_Chr3g0089211 33.626 455 232 10 8 402 60 504 1.42e-68 235
Msa1052330 MtrunA17_Chr5g0430331 31.757 444 217 9 13 392 9 430 1.70e-68 223
Msa1052330 MtrunA17_Chr5g0430441 32.151 451 226 9 13 399 9 443 1.92e-68 233
Msa1052330 MtrunA17_Chr3g0089251 33.407 455 233 10 8 402 42 486 4.29e-68 234
Msa1052330 MtrunA17_Chr3g0089781 34.444 450 227 10 12 402 17 457 5.42e-68 232
Msa1052330 MtrunA17_Chr3g0089811 34.513 452 232 10 8 402 13 457 5.67e-68 233
Msa1052330 MtrunA17_Chr6g0456131 33.623 461 212 12 12 400 11 449 6.47e-68 232
Msa1052330 MtrunA17_Chr3g0092241 34.071 452 226 11 12 402 17 457 7.21e-68 232
Msa1052330 MtrunA17_Chr3g0082811 34.382 445 239 8 9 404 4 444 7.97e-68 229
Msa1052330 MtrunA17_Chr3g0090141 34.590 451 229 10 12 404 17 459 1.84e-67 232
Msa1052330 MtrunA17_Chr1g0169901 33.481 451 231 9 8 402 13 450 2.03e-67 231
Msa1052330 MtrunA17_Chr5g0414181 31.510 457 245 9 1 399 1 447 4.58e-67 229
Msa1052330 MtrunA17_Chr5g0430511 31.166 446 228 9 14 395 10 440 5.13e-67 229
Msa1052330 MtrunA17_Chr3g0091081 33.407 452 229 12 12 402 17 457 6.33e-67 230
Msa1052330 MtrunA17_Chr3g0087701 36.876 461 207 12 1 399 1 439 8.53e-67 229
Msa1052330 MtrunA17_Chr5g0414171 33.333 393 232 8 8 395 4 371 9.45e-67 218
Msa1052330 MtrunA17_Chr3g0089651 33.626 455 228 11 12 402 17 461 2.96e-66 228
Msa1052330 MtrunA17_Chr5g0414311 32.468 462 239 11 1 399 1 452 3.70e-66 228
Msa1052330 MtrunA17_Chr3g0090401 33.850 452 233 10 12 405 228 671 8.45e-66 227
Msa1052330 MtrunA17_Chr3g0123111 33.790 438 223 10 13 395 9 434 1.02e-65 226
Msa1052330 MtrunA17_Chr3g0091061 33.114 456 233 12 8 402 13 457 2.06e-65 226
Msa1052330 MtrunA17_Chr5g0430141 31.250 448 227 10 13 395 9 440 3.59e-65 224
Msa1052330 MtrunA17_Chr5g0414201 32.543 464 232 13 1 399 1 448 7.48e-65 223
Msa1052330 MtrunA17_Chr3g0089471 32.967 455 238 10 7 402 12 458 7.78e-65 224
Msa1052330 MtrunA17_Chr3g0086181 33.049 469 212 12 1 399 1 437 8.32e-65 222
Msa1052330 MtrunA17_Chr3g0086151 32.836 469 213 12 1 399 1 437 1.72e-64 221
Msa1052330 MtrunA17_Chr3g0090371 33.628 452 234 10 12 405 17 460 2.00e-64 223
Msa1052330 MtrunA17_Chr3g0089961 32.965 452 234 11 12 402 17 460 2.13e-64 221
Msa1052330 MtrunA17_Chr6g0468101 34.091 440 219 10 13 395 9 434 3.27e-64 222
Msa1052330 MtrunA17_Chr3g0090691 33.186 452 230 12 12 402 17 457 3.42e-64 223
Msa1052330 MtrunA17_Chr3g0091041 32.892 453 215 14 12 402 17 442 3.42e-64 214
Msa1052330 MtrunA17_Chr5g0415511 32.397 463 242 11 1 403 1 452 7.34e-64 217
Msa1052330 MtrunA17_Chr4g0025391 33.188 458 221 12 12 402 17 456 1.02e-63 221
Msa1052330 MtrunA17_Chr3g0086161 34.607 471 202 12 1 399 1 437 1.49e-63 220
Msa1052330 MtrunA17_Chr3g0089541 33.187 455 230 11 12 402 17 461 1.67e-63 220
Msa1052330 MtrunA17_Chr8g0338861 65.432 162 55 1 244 405 2 162 1.78e-63 215
Msa1052330 MtrunA17_Chr3g0089761 33.772 456 230 12 8 402 13 457 2.64e-63 220
Msa1052330 MtrunA17_Chr3g0089991 32.747 455 232 11 12 402 17 461 2.66e-63 220
Msa1052330 MtrunA17_Chr3g0086221 35.242 454 221 12 1 399 1 436 3.81e-63 219
Msa1052330 MtrunA17_Chr3g0084971 36.085 424 193 12 35 399 41 445 5.49e-63 219
Msa1052330 MtrunA17_Chr3g0089421 32.613 463 228 12 8 402 13 459 6.30e-63 219
Msa1052330 MtrunA17_Chr6g0456121 33.623 461 220 14 1 401 1 435 7.49e-63 218
Msa1052330 MtrunA17_Chr6g0468331 32.569 436 229 8 13 395 9 432 1.38e-62 214
Msa1052330 MtrunA17_Chr5g0415471 32.391 460 240 10 1 399 1 450 1.59e-62 217
Msa1052330 MtrunA17_Chr3g0090651 33.971 418 203 12 46 402 52 457 1.62e-62 217
Msa1052330 MtrunA17_Chr6g0468021 32.426 441 223 10 13 395 9 432 3.56e-62 216
Msa1052330 MtrunA17_Chr3g0089591 32.237 456 234 11 12 402 17 462 3.66e-62 216
Msa1052330 MtrunA17_Chr3g0089911 31.522 460 232 11 12 405 17 459 6.88e-62 211
Msa1052330 MtrunA17_Chr6g0468341 32.955 440 224 10 13 395 9 434 9.71e-62 214
Msa1052330 MtrunA17_Chr5g0431051 30.804 448 229 10 13 395 9 440 1.27e-61 214
Msa1052330 MtrunA17_Chr3g0085651 33.909 463 235 13 1 403 1 452 1.31e-61 215
Msa1052330 MtrunA17_Chr3g0089931 31.637 452 226 11 12 404 17 444 3.94e-61 206
Msa1052330 MtrunA17_Chr3g0087581 32.967 455 234 10 1 399 1 440 4.10e-61 213
Msa1052330 MtrunA17_Chr3g0086621 33.684 475 201 14 1 399 1 437 7.03e-61 213
Msa1052330 MtrunA17_Chr7g0221481 33.843 458 227 11 1 399 1 441 1.70e-60 210
Msa1052330 MtrunA17_Chr3g0085931 31.096 447 236 10 11 399 7 439 2.87e-60 211
Msa1052330 MtrunA17_Chr3g0092261 30.769 455 236 11 12 402 62 501 5.01e-60 210
Msa1052330 MtrunA17_Chr6g0470081 31.991 447 232 10 11 399 7 439 5.99e-60 210
Msa1052330 MtrunA17_Chr8g0348931 31.798 456 236 10 12 401 17 463 6.12e-60 210
Msa1052330 MtrunA17_Chr8g0355411 33.624 458 231 12 8 402 10 457 6.78e-60 208
Msa1052330 MtrunA17_Chr6g0467961 31.222 442 237 10 8 395 4 432 1.23e-59 207
Msa1052330 MtrunA17_Chr2g0282991 33.258 445 227 8 13 399 18 450 2.05e-59 209
Msa1052330 MtrunA17_Chr3g0084081 33.766 462 236 12 1 399 1 455 5.99e-59 207
Msa1052330 MtrunA17_Chr4g0009781 35.371 458 232 12 1 405 1 447 1.22e-58 206
Msa1052330 MtrunA17_Chr3g0085561 33.634 443 204 9 13 399 17 425 2.52e-58 205
Msa1052330 MtrunA17_Chr3g0085331 32.965 452 226 12 13 399 17 456 3.18e-58 205
Msa1052330 MtrunA17_Chr6g0470011 31.767 447 233 10 11 399 7 439 4.23e-58 204
Msa1052330 MtrunA17_Chr5g0446611 33.482 448 225 9 13 399 18 453 6.15e-58 203
Msa1052330 MtrunA17_Chr8g0352831 31.878 458 242 11 9 399 11 465 9.47e-58 204
Msa1052330 MtrunA17_Chr3g0085501 32.667 450 230 11 13 399 17 456 1.69e-57 203
Msa1052330 MtrunA17_Chr3g0082131 33.967 421 206 13 46 405 50 459 2.05e-57 203
Msa1052330 MtrunA17_Chr3g0084051 33.696 460 239 11 1 399 1 455 2.21e-57 202
Msa1052330 MtrunA17_Chr3g0082391 33.333 423 210 10 35 396 40 451 4.53e-57 200
Msa1052330 MtrunA17_Chr4g0010261 34.879 453 234 11 1 402 1 443 5.33e-57 201
Msa1052330 MtrunA17_Chr6g0467911 30.562 445 237 10 13 399 9 439 6.81e-57 199
Msa1052330 MtrunA17_Chr3g0087541 33.111 450 228 12 13 399 17 456 7.90e-57 201
Msa1052330 MtrunA17_Chr3g0085471 33.408 446 232 11 13 399 17 456 8.82e-57 201
Msa1052330 MtrunA17_Chr3g0085801 33.259 451 228 12 13 399 17 458 1.08e-56 200
Msa1052330 MtrunA17_Chr3g0084031 33.333 444 232 10 14 399 20 457 1.42e-56 200
Msa1052330 MtrunA17_Chr5g0417301 29.955 444 188 12 17 399 13 394 8.08e-56 193
Msa1052330 MtrunA17_Chr8g0352861 31.111 450 249 8 14 404 19 466 1.34e-55 197
Msa1052330 MtrunA17_Chr6g0468121 31.151 443 227 11 13 395 9 433 1.65e-55 197
Msa1052330 MtrunA17_Chr6g0468451 29.932 441 243 9 13 399 9 437 1.82e-55 197
Msa1052330 MtrunA17_Chr3g0085451 32.883 444 209 9 13 399 17 428 2.05e-55 197
Msa1052330 MtrunA17_Chr4g0010201 34.354 457 238 12 1 405 1 447 2.70e-55 196
Msa1052330 MtrunA17_Chr6g0468271 30.455 440 232 9 13 395 9 431 2.84e-54 194
Msa1052330 MtrunA17_Chr1g0164391 34.038 426 203 13 35 396 40 451 5.71e-54 193
Msa1052330 MtrunA17_Chr3g0090431 36.808 307 133 6 156 405 30 332 9.78e-54 192
Msa1052330 MtrunA17_Chr3g0085091 32.287 446 226 11 13 401 18 444 1.14e-53 192
Msa1052330 MtrunA17_Chr3g0082101 33.254 418 209 11 46 402 52 460 1.60e-53 191
Msa1052330 MtrunA17_Chr6g0484551 30.396 454 214 14 12 402 17 431 1.91e-53 190
Msa1052330 MtrunA17_Chr4g0020501 32.933 416 206 11 44 399 5 407 3.13e-53 190
Msa1052330 MtrunA17_Chr1g0164611 33.017 421 212 11 46 405 52 463 3.87e-53 190
Msa1052330 MtrunA17_Chr7g0248531 32.108 408 209 11 47 401 51 443 4.12e-53 189
Msa1052330 MtrunA17_Chr4g0010221 33.407 455 242 11 1 404 1 445 5.95e-53 189
Msa1052330 MtrunA17_Chr6g0468151 28.166 458 251 9 5 399 1 443 8.60e-53 189
Msa1052330 MtrunA17_Chr4g0010491 35.000 440 220 13 1 386 1 428 1.86e-52 181
Msa1052330 MtrunA17_Chr1g0164581 31.579 418 196 12 46 405 50 435 5.73e-52 187
Msa1052330 MtrunA17_Chr3g0082791 32.692 416 217 10 41 399 48 457 1.48e-51 186
Msa1052330 MtrunA17_Chr3g0082311 31.294 425 216 10 35 396 40 451 2.18e-51 185
Msa1052330 MtrunA17_Chr1g0147141 31.360 456 222 10 12 402 30 459 8.81e-51 183
Msa1052330 MtrunA17_Chr3g0085131 31.136 440 225 9 13 396 18 435 2.21e-50 182
Msa1052330 MtrunA17_Chr2g0299101 29.487 468 247 11 1 399 1 454 6.71e-50 180
Msa1052330 MtrunA17_Chr3g0113481 29.425 452 238 7 11 403 14 443 1.23e-49 179
Msa1052330 MtrunA17_Chr3g0082351 30.152 461 245 11 1 396 1 449 1.57e-49 180
Msa1052330 MtrunA17_Chr3g0091011 32.553 427 224 13 13 399 18 420 3.74e-49 179
Msa1052330 MtrunA17_Chr5g0414291 29.197 411 222 10 13 360 9 413 7.70e-49 171
Msa1052330 MtrunA17_Chr4g0010251 33.114 456 244 11 1 405 1 446 1.27e-48 177
Msa1052330 MtrunA17_Chr3g0085111 31.461 445 222 12 13 399 18 437 1.28e-48 177
Msa1052330 MtrunA17_Chr3g0085521 32.880 441 212 12 15 399 19 431 1.41e-48 177
Msa1052330 MtrunA17_Chr3g0087301 29.512 410 221 8 1 351 1 401 1.51e-48 177
Msa1052330 MtrunA17_Chr2g0299121 29.487 468 247 11 1 399 1 454 1.59e-48 177
Msa1052330 MtrunA17_Chr3g0113791 29.047 451 239 7 12 403 15 443 1.30e-47 174
Msa1052330 MtrunA17_Chr2g0308491 35.656 244 107 2 188 381 14 257 1.38e-47 163
Msa1052330 MtrunA17_Chr3g0082321 34.190 389 198 14 35 396 40 397 2.04e-47 173
Msa1052330 MtrunA17_Chr2g0299091 29.524 420 229 8 44 401 16 430 4.65e-47 172
Msa1052330 MtrunA17_Chr5g0430901 28.571 406 212 10 13 355 9 399 2.11e-46 170
Msa1052330 MtrunA17_Chr6g0470021 34.667 300 134 6 157 399 36 330 1.04e-45 168
Msa1052330 MtrunA17_Chr2g0299151 27.211 441 247 7 13 399 18 438 2.91e-45 167
Msa1052330 MtrunA17_Chr3g0086741 30.022 463 228 14 15 399 19 463 4.93e-45 166
Msa1052330 MtrunA17_Chr8g0338411 62.590 139 40 2 1 139 1 127 9.56e-45 151
Msa1052330 MtrunA17_Chr3g0085161 37.248 298 138 8 144 399 12 302 1.02e-44 166
Msa1052330 MtrunA17_Chr3g0085701 31.264 451 212 8 15 399 20 438 1.22e-44 165
Msa1052330 MtrunA17_Chr3g0085551 35.836 293 133 3 161 399 40 331 1.22e-44 165
Msa1052330 MtrunA17_Chr3g0089871 43.478 184 101 2 220 402 275 456 1.94e-44 165
Msa1052330 MtrunA17_Chr3g0089871 34.928 209 114 6 12 212 17 211 1.69e-21 97.4
Msa1052330 MtrunA17_Chr3g0084061 30.684 453 240 13 13 405 17 455 7.99e-43 160
Msa1052330 MtrunA17_Chr3g0085171 29.821 446 232 9 9 400 7 425 7.60e-42 157
Msa1052330 MtrunA17_Chr5g0413811 42.857 182 100 2 218 399 46 223 9.78e-42 155
Msa1052330 MtrunA17_Chr6g0468111 38.211 246 140 6 157 395 36 276 2.03e-41 152
Msa1052330 MtrunA17_Chr8g0355071 42.935 184 101 3 223 404 90 271 2.72e-41 147
Msa1052330 MtrunA17_Chr3g0085751 29.545 440 234 12 15 399 16 434 2.57e-39 150
Msa1052330 MtrunA17_Chr7g0257221 42.697 178 99 2 220 396 292 467 3.36e-39 149
Msa1052330 MtrunA17_Chr7g0257221 37.168 226 120 7 1 212 1 218 8.34e-34 134
Msa1052330 MtrunA17_Chr5g0416571 29.526 359 155 8 13 310 9 330 5.03e-39 142
Msa1052330 MtrunA17_Chr5g0417251 41.573 178 101 2 223 400 40 214 2.21e-38 146
Msa1052330 MtrunA17_Chr1g0169951 42.938 177 98 2 220 395 290 464 3.24e-38 146
Msa1052330 MtrunA17_Chr1g0169951 33.778 225 131 6 1 212 1 220 1.07e-29 121
Msa1052330 MtrunA17_Chr3g0086091 39.548 177 106 1 223 399 73 248 3.52e-38 146
Msa1052330 MtrunA17_Chr5g0433771 40.541 222 114 8 1 212 1 214 3.95e-38 146
Msa1052330 MtrunA17_Chr5g0433771 38.547 179 105 3 218 393 282 458 1.64e-31 127
Msa1052330 MtrunA17_Chr1g0160341 67.308 104 33 1 1 104 1 103 4.54e-38 133
Msa1052330 MtrunA17_Chr3g0091971 29.803 406 215 12 45 405 43 423 4.75e-38 146
Msa1052330 MtrunA17_Chr2g0309151 41.714 175 99 2 220 393 60 232 6.41e-38 143
Msa1052330 MtrunA17_Chr8g0338881 67.241 116 32 2 1 116 1102 1211 7.93e-38 145
Msa1052330 MtrunA17_Chr7g0257261 37.668 223 123 7 1 212 1 218 8.98e-38 137
Msa1052330 MtrunA17_Chr3g0087731 42.222 180 98 3 223 399 73 249 1.03e-37 145
Msa1052330 MtrunA17_Chr2g0282981 30.864 405 213 8 13 359 18 413 2.23e-37 140
Msa1052330 MtrunA17_Chr7g0257541 37.668 223 125 4 1 212 3 222 4.61e-37 143
Msa1052330 MtrunA17_Chr7g0257541 42.614 176 98 2 220 394 291 464 1.63e-35 139
Msa1052330 MtrunA17_Chr7g0257191 40.678 177 102 2 220 395 293 467 1.96e-36 141
Msa1052330 MtrunA17_Chr7g0257191 35.841 226 123 7 1 212 1 218 1.24e-32 130
Msa1052330 MtrunA17_Chr7g0257201 38.596 228 114 8 1 212 1 218 3.45e-36 140
Msa1052330 MtrunA17_Chr7g0257201 41.243 177 101 2 220 395 292 466 1.03e-35 139
Msa1052330 MtrunA17_Chr1g0169941 41.243 177 101 2 218 393 50 224 4.30e-36 135
Msa1052330 MtrunA17_Chr7g0248431 39.189 222 116 8 1 212 1 213 4.35e-36 139
Msa1052330 MtrunA17_Chr7g0248431 39.560 182 109 1 218 399 279 459 6.91e-35 135
Msa1052330 MtrunA17_Chr7g0257551 41.243 177 101 2 220 395 215 389 7.72e-36 136
Msa1052330 MtrunA17_Chr7g0257551 39.231 130 69 2 91 212 17 144 1.30e-19 90.1
Msa1052330 MtrunA17_Chr7g0248221 39.640 222 115 8 1 212 1 213 9.64e-36 139
Msa1052330 MtrunA17_Chr7g0248221 39.560 182 109 1 218 399 279 459 5.33e-34 134
Msa1052330 MtrunA17_Chr6g0469991 29.412 374 193 9 11 326 7 367 1.07e-35 134
Msa1052330 MtrunA17_Chr6g0468401 30.183 328 165 7 13 285 9 327 4.50e-35 132
Msa1052330 MtrunA17_Chr1g0168901 26.995 426 224 13 35 405 40 433 3.57e-33 132
Msa1052330 MtrunA17_Chr3g0078361 38.333 180 107 3 218 396 90 266 4.45e-33 129
Msa1052330 MtrunA17_Chr1g0164631 37.363 182 110 3 216 396 280 458 4.57e-33 131
Msa1052330 MtrunA17_Chr1g0164631 33.898 177 102 5 46 219 51 215 4.38e-16 80.5
Msa1052330 MtrunA17_Chr3g0083721 29.808 416 209 16 35 396 8 394 1.55e-31 127
Msa1052330 MtrunA17_Chr5g0404741 26.882 465 259 12 1 399 1 450 2.28e-31 126
Msa1052330 MtrunA17_Chr3g0083591 27.318 399 193 12 65 405 66 425 2.64e-31 126
Msa1052330 MtrunA17_Chr7g0257251 46.617 133 68 2 264 395 2 132 3.35e-31 117
Msa1052330 MtrunA17_Chr3g0113781 34.946 186 121 0 218 403 53 238 3.40e-31 125
Msa1052330 MtrunA17_Chr3g0109211 66.667 87 28 1 1 87 1 86 6.98e-31 114
Msa1052330 MtrunA17_Chr3g0084811 32.534 292 139 11 165 402 321 608 1.54e-30 124
Msa1052330 MtrunA17_Chr4g0011571 66.667 87 28 1 1 87 12 97 1.83e-30 113
Msa1052330 MtrunA17_Chr4g0037421 35.135 185 113 4 223 405 338 517 5.53e-30 122
Msa1052330 MtrunA17_Chr3g0080871 28.333 300 156 6 161 405 150 445 9.09e-30 122
Msa1052330 MtrunA17_Chr3g0101231 27.119 472 250 16 15 405 19 477 1.84e-29 120
Msa1052330 MtrunA17_Chr3g0083751 36.649 191 115 4 217 405 279 465 2.66e-29 120
Msa1052330 MtrunA17_Chr3g0081211 24.255 470 261 15 13 399 9 466 4.09e-29 120
Msa1052330 MtrunA17_Chr1g0189351 24.390 451 247 13 30 399 26 463 7.80e-29 119
Msa1052330 MtrunA17_Chr3g0100831 23.529 476 260 15 9 399 5 461 6.97e-28 116
Msa1052330 MtrunA17_Chr3g0085721 27.665 394 203 9 8 348 12 376 7.20e-28 113
Msa1052330 MtrunA17_Chr7g0219851 26.226 469 258 16 8 404 6 458 8.97e-28 115
Msa1052330 MtrunA17_Chr5g0415551 30.492 305 149 7 160 405 24 324 1.18e-27 115
Msa1052330 MtrunA17_Chr3g0083621 35.263 190 115 5 217 403 285 469 1.54e-27 115
Msa1052330 MtrunA17_Chr2g0299001 23.476 443 261 14 28 396 24 462 1.84e-27 115
Msa1052330 MtrunA17_Chr3g0082381 30.612 294 137 7 35 269 40 325 2.99e-27 110
Msa1052330 MtrunA17_Chr7g0255761 32.035 231 136 4 119 334 1 225 4.17e-27 110
Msa1052330 MtrunA17_Chr3g0100961 24.628 471 256 16 14 399 10 466 4.79e-27 114
Msa1052330 MtrunA17_Chr7g0257211 35.751 193 108 6 1 185 1 185 1.09e-26 106
Msa1052330 MtrunA17_Chr4g0008461 35.079 191 116 5 217 404 255 440 1.36e-26 112
Msa1052330 MtrunA17_Chr3g0101181 26.503 366 193 10 113 405 115 477 8.14e-26 110
Msa1052330 MtrunA17_Chr3g0081181 24.390 451 248 17 24 399 19 451 1.64e-25 109
Msa1052330 MtrunA17_Chr7g0257601 32.883 222 130 7 1 212 1 213 2.07e-25 103
Msa1052330 MtrunA17_Chr3g0081361 24.889 450 247 15 30 399 34 472 2.45e-25 108
Msa1052330 MtrunA17_Chr8g0338421 74.603 63 16 0 218 280 47 109 2.83e-25 99.4
Msa1052330 MtrunA17_Chr3g0083681 25.879 398 222 8 61 405 60 437 3.29e-25 108
Msa1052330 MtrunA17_Chr3g0080751 22.296 453 267 12 30 403 26 472 3.77e-25 108
Msa1052330 MtrunA17_Chr3g0101321 24.034 466 268 15 9 399 4 458 3.78e-25 108
Msa1052330 MtrunA17_Chr5g0410001 22.128 470 277 14 1 399 1 452 4.32e-25 107
Msa1052330 MtrunA17_Chr2g0299141 38.000 150 86 3 253 396 18 166 8.58e-25 105
Msa1052330 MtrunA17_Chr3g0083641 27.110 391 205 11 61 395 60 426 9.74e-25 107
Msa1052330 MtrunA17_Chr3g0081191 22.881 472 272 15 8 399 4 463 1.65e-24 106
Msa1052330 MtrunA17_Chr5g0410031 22.678 463 276 12 13 405 9 459 2.02e-24 105
Msa1052330 MtrunA17_Chr5g0410021 22.667 450 278 11 13 400 9 450 3.39e-24 105
Msa1052330 MtrunA17_Chr3g0112511 23.555 467 268 14 9 399 4 457 3.59e-24 105
Msa1052330 MtrunA17_Chr3g0080651 24.112 394 239 11 30 399 29 386 5.18e-24 104
Msa1052330 MtrunA17_Chr3g0080741 24.222 450 256 13 30 399 26 470 5.54e-24 104
Msa1052330 MtrunA17_Chr6g0468141 30.189 265 145 8 112 340 2 262 7.90e-24 99.8
Msa1052330 MtrunA17_Chr8g0338871 58.654 104 42 1 119 222 1 103 1.00e-23 96.3
Msa1052330 MtrunA17_Chr3g0101201 23.195 457 267 14 15 399 21 465 1.31e-23 103
Msa1052330 MtrunA17_Chr1g0159111 28.364 275 138 7 186 404 169 440 2.92e-23 102
Msa1052330 MtrunA17_Chr1g0189271 26.910 301 155 7 162 399 5 303 3.50e-23 99.4
Msa1052330 MtrunA17_Chr8g0356251 31.088 193 125 4 217 405 298 486 9.83e-23 100
Msa1052330 MtrunA17_Chr3g0101271 24.385 447 246 13 28 399 11 440 1.90e-22 100
Msa1052330 MtrunA17_Chr3g0101251 25.175 429 262 15 15 399 14 427 2.01e-22 99.8
Msa1052330 MtrunA17_Chr3g0101241 24.385 447 246 13 28 399 11 440 2.01e-22 99.8
Msa1052330 MtrunA17_Chr5g0413821 29.469 207 134 5 14 211 10 213 2.34e-22 94.7
Msa1052330 MtrunA17_Chr4g0020411 38.411 151 76 5 238 377 5 149 2.62e-22 92.4
Msa1052330 MtrunA17_Chr3g0100971 22.594 478 276 13 9 405 5 469 2.87e-22 99.4
Msa1052330 MtrunA17_Chr3g0100761 23.404 470 242 13 9 405 5 429 2.89e-22 99.4
Msa1052330 MtrunA17_Chr4g0048471 26.296 270 140 8 186 399 43 309 3.26e-22 99.0
Msa1052330 MtrunA17_Chr3g0080601 21.806 454 259 15 30 399 26 467 6.88e-22 98.2
Msa1052330 MtrunA17_Chr3g0085431 47.727 88 46 0 312 399 2 89 1.51e-21 96.7
Msa1052330 MtrunA17_Chr3g0081391 30.688 189 123 4 217 399 281 467 3.09e-21 96.3
Msa1052330 MtrunA17_Chr3g0101221 23.226 465 267 13 15 399 13 467 4.27e-21 95.9
Msa1052330 MtrunA17_Chr3g0091961 36.429 140 84 3 267 405 5 140 4.71e-21 94.4
Msa1052330 MtrunA17_Chr3g0101331 21.384 477 283 13 9 399 4 474 6.14e-21 95.5
Msa1052330 MtrunA17_Chr3g0100801 22.894 463 244 14 9 399 1 422 6.21e-21 95.1
Msa1052330 MtrunA17_Chr3g0081341 30.256 195 128 4 217 405 345 537 1.06e-20 94.7
Msa1052330 MtrunA17_Chr6g0468191 31.628 215 134 5 13 223 9 214 1.14e-20 90.9
Msa1052330 MtrunA17_Chr5g0409991 22.026 454 274 13 13 400 9 448 2.00e-20 94.0
Msa1052330 MtrunA17_Chr7g0248411 43.119 109 60 2 218 326 214 320 8.97e-20 89.4
Msa1052330 MtrunA17_Chr7g0248411 39.189 148 78 6 72 212 5 147 1.22e-19 89.0
Msa1052330 MtrunA17_Chr6g0478721 31.606 193 112 5 218 400 171 353 9.42e-20 91.7
Msa1052330 MtrunA17_Chr5g0415491 28.910 211 93 4 157 312 13 221 3.35e-19 85.9
Msa1052330 MtrunA17_Chr4g0048421 25.993 277 134 8 186 400 168 435 4.73e-19 89.7
Msa1052330 MtrunA17_Chr5g0410301 30.072 276 138 10 169 399 143 408 5.12e-19 89.7
Msa1052330 MtrunA17_Chr3g0094301 29.189 185 123 4 223 401 288 470 6.25e-19 89.4
Msa1052330 MtrunA17_Chr7g0229761 29.189 185 123 4 223 401 288 470 6.25e-19 89.4
Msa1052330 MtrunA17_Chr5g0410351 30.267 337 174 13 113 399 92 417 6.32e-19 89.4
Msa1052330 MtrunA17_Chr1g0189511 45.098 102 53 2 301 399 7 108 7.02e-19 85.9
Msa1052330 MtrunA17_Chr5g0410161 25.301 332 192 11 114 403 248 565 1.07e-18 88.6
Msa1052330 MtrunA17_Chr1g0151481 27.982 218 143 6 196 405 264 475 2.38e-18 87.4
Msa1052330 MtrunA17_Chr5g0409971 20.485 454 286 12 13 400 9 453 2.63e-18 87.4
Msa1052330 MtrunA17_Chr3g0080771 28.415 183 123 4 223 399 288 468 3.88e-18 87.0
Msa1052330 MtrunA17_Chr5g0410261 27.241 290 141 8 169 399 161 439 4.12e-18 86.7
Msa1052330 MtrunA17_Chr3g0080791 28.415 183 123 4 223 399 288 468 1.19e-17 85.5
Msa1052330 MtrunA17_Chr3g0101011 29.570 186 120 4 223 399 297 480 1.85e-17 84.7
Msa1052330 MtrunA17_Chr3g0104421 43.243 74 41 1 326 399 1 73 2.43e-17 77.0
Msa1052330 MtrunA17_Chr6g0470061 29.208 202 126 6 11 206 7 197 3.95e-17 79.3
Msa1052330 MtrunA17_Chr3g0081371 30.601 183 115 6 223 399 296 472 4.13e-17 83.6
Msa1052330 MtrunA17_Chr4g0066881 44.444 90 49 1 1 90 1 89 9.26e-17 76.3
Msa1052330 MtrunA17_Chr3g0101211 30.220 182 118 5 223 399 77 254 1.14e-16 81.3
Msa1052330 MtrunA17_Chr5g0410481 25.995 427 212 20 27 403 26 398 1.42e-16 82.0
Msa1052330 MtrunA17_Chr8g0392521 35.326 184 100 7 38 212 11 184 4.05e-16 79.0
Msa1052330 MtrunA17_Chr3g0100851 22.772 303 161 8 157 399 53 342 4.35e-16 80.5
Msa1052330 MtrunA17_Chr3g0080731 28.804 184 121 5 223 399 288 468 4.97e-16 80.5
Msa1052330 MtrunA17_Chr3g0084351 28.962 183 122 5 223 399 213 393 7.76e-16 79.3
Msa1052330 MtrunA17_Chr3g0080631 23.367 398 204 14 30 343 26 406 9.88e-16 79.3
Msa1052330 MtrunA17_Chr2g0299131 38.261 115 64 3 218 326 106 219 5.05e-15 73.9
Msa1052330 MtrunA17_Chr3g0080721 27.322 183 125 4 223 399 26 206 6.61e-15 76.6
Msa1052330 MtrunA17_Chr7g0220981 24.920 313 163 11 141 390 3 306 8.82e-15 75.9
Msa1052330 MtrunA17_Chr2g0309141 30.539 167 93 6 1 164 1 147 9.08e-15 71.2
Msa1052330 MtrunA17_Chr3g0082371 43.421 76 41 1 321 396 2 75 1.14e-14 75.5
Msa1052330 MtrunA17_Chr3g0100731 27.869 183 124 4 223 399 41 221 1.61e-14 75.5
Msa1052330 MtrunA17_Chr5g0443761 31.792 173 106 6 223 391 114 278 3.96e-14 74.7
Msa1052330 MtrunA17_Chr3g0100681 24.643 280 144 8 184 399 3 279 1.43e-13 72.4
Msa1052330 MtrunA17_Chr3g0101391 32.331 133 87 2 270 399 16 148 1.54e-13 72.4
Msa1052330 MtrunA17_Chr1g0197241 23.131 428 249 14 28 396 670 1076 5.87e-13 70.9
Msa1052330 MtrunA17_Chr7g0221021 25.857 321 157 14 141 390 155 465 1.70e-12 69.3
Msa1052330 MtrunA17_Chr3g0099571 29.143 175 115 5 223 392 256 426 1.93e-12 69.3
Msa1052330 MtrunA17_Chr3g0091121 41.791 67 37 1 336 402 5 69 3.05e-12 68.6
Msa1052330 MtrunA17_Chr8g0360991 28.415 183 103 7 223 391 255 423 1.05e-11 67.0
Msa1052330 MtrunA17_Chr2g0282891 31.683 101 69 0 245 345 7 107 1.24e-11 65.5
Msa1052330 MtrunA17_Chr3g0086071 50.000 56 28 0 344 399 2 57 1.86e-11 65.9
Msa1052330 MtrunA17_Chr3g0091851 24.571 175 123 5 223 395 191 358 3.81e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1052330 AT3G14470.1 30.152 461 253 8 1 399 4 457 2.67e-62 217
Msa1052330 AT3G14470.2 30.152 461 253 8 1 399 4 457 2.67e-62 217
Msa1052330 AT3G14460.1 28.777 417 234 7 35 395 36 445 1.47e-50 183
Msa1052330 AT1G50180.1 26.292 445 233 12 30 396 26 453 3.32e-37 144
Msa1052330 AT1G53350.1 25.325 462 263 13 1 396 1 446 4.37e-37 144
Msa1052330 AT5G35450.2 25.107 466 266 16 1 400 1 449 6.60e-35 137
Msa1052330 AT5G35450.1 25.107 466 266 16 1 400 1 449 6.60e-35 137
Msa1052330 AT3G50950.2 25.059 423 254 9 34 399 30 446 9.49e-35 137
Msa1052330 AT3G50950.1 25.059 423 254 9 34 399 30 446 9.49e-35 137
Msa1052330 AT3G46530.1 26.190 462 254 16 8 399 4 448 9.40e-34 134
Msa1052330 AT5G43470.3 25.217 460 263 16 14 403 10 458 5.72e-32 129
Msa1052330 AT5G43470.2 25.217 460 263 16 14 403 10 458 5.72e-32 129
Msa1052330 AT5G43470.4 25.217 460 263 16 14 403 10 458 5.72e-32 129
Msa1052330 AT5G43470.1 25.217 460 263 16 14 403 10 458 5.72e-32 129
Msa1052330 AT5G48620.6 24.947 473 270 17 1 403 1 458 3.56e-31 126
Msa1052330 AT5G48620.1 24.947 473 270 17 1 403 1 458 3.56e-31 126
Msa1052330 AT5G48620.4 24.947 473 270 17 1 403 1 458 3.56e-31 126
Msa1052330 AT5G48620.2 24.947 473 270 17 1 403 1 458 3.56e-31 126
Msa1052330 AT5G48620.3 24.947 473 270 17 1 403 1 458 3.56e-31 126
Msa1052330 AT5G48620.5 24.947 473 270 17 1 403 1 458 3.56e-31 126
Msa1052330 AT5G63020.1 33.854 192 119 4 218 405 256 443 8.47e-29 119
Msa1052330 AT1G59124.1 25.696 467 258 16 2 396 3 452 1.86e-28 118
Msa1052330 AT1G58807.2 25.696 467 258 16 2 396 3 452 1.86e-28 118
Msa1052330 AT1G59124.2 25.696 467 258 16 2 396 3 452 1.88e-28 118
Msa1052330 AT1G58807.1 25.696 467 258 16 2 396 3 452 1.88e-28 118
Msa1052330 AT1G58400.1 24.401 459 275 14 1 400 1 446 5.67e-28 117
Msa1052330 AT1G59218.1 25.268 467 260 16 2 396 3 452 6.68e-28 116
Msa1052330 AT1G59218.2 25.268 467 260 16 2 396 3 452 6.68e-28 116
Msa1052330 AT1G59218.3 25.268 467 260 16 2 396 3 452 6.68e-28 116
Msa1052330 AT1G58848.1 25.268 467 260 16 2 396 3 452 6.68e-28 116
Msa1052330 AT1G58848.2 25.268 467 260 16 2 396 3 452 6.68e-28 116
Msa1052330 AT1G12220.3 35.676 185 111 4 220 400 139 319 4.99e-27 114
Msa1052330 AT1G12220.1 35.676 185 111 4 220 400 260 440 5.98e-27 114
Msa1052330 AT1G12220.2 35.676 185 111 4 220 400 260 440 5.98e-27 114
Msa1052330 AT3G46710.1 23.904 456 265 18 8 399 4 441 3.64e-26 111
Msa1052330 AT5G43730.4 33.690 187 116 4 218 400 253 435 4.03e-26 111
Msa1052330 AT5G43730.1 33.690 187 116 4 218 400 253 435 4.03e-26 111
Msa1052330 AT5G43730.3 33.690 187 116 4 218 400 253 435 4.03e-26 111
Msa1052330 AT5G43730.2 33.690 187 116 4 218 400 253 435 4.03e-26 111
Msa1052330 AT5G43730.5 33.690 187 116 4 218 400 253 435 4.03e-26 111
Msa1052330 AT1G58602.2 24.289 457 262 16 14 396 10 456 7.72e-26 110
Msa1052330 AT1G58602.1 24.289 457 262 16 14 396 10 456 7.72e-26 110
Msa1052330 AT1G58400.3 23.241 469 278 13 1 400 1 456 9.87e-26 110
Msa1052330 AT1G58400.2 23.241 469 278 13 1 400 1 456 9.87e-26 110
Msa1052330 AT1G12210.1 36.702 188 106 6 218 399 258 438 1.16e-25 110
Msa1052330 AT1G12210.3 36.702 188 106 6 218 399 216 396 1.16e-25 110
Msa1052330 AT1G12210.2 36.702 188 106 6 218 399 216 396 1.16e-25 110
Msa1052330 AT1G61180.1 26.923 286 150 8 169 399 154 435 1.68e-25 109
Msa1052330 AT1G61180.2 26.923 286 150 8 169 399 154 435 1.72e-25 109
Msa1052330 AT1G59780.2 23.282 451 257 14 14 396 10 439 2.22e-25 109
Msa1052330 AT1G59780.1 23.282 451 257 14 14 396 15 444 2.55e-25 108
Msa1052330 AT1G15890.2 33.862 189 115 5 217 400 94 277 4.14e-25 108
Msa1052330 AT1G15890.1 32.979 188 118 4 217 400 254 437 4.70e-25 108
Msa1052330 AT3G07040.1 31.383 188 123 4 217 400 278 463 6.59e-25 107
Msa1052330 AT1G58390.1 22.991 448 271 13 14 396 10 448 6.83e-25 107
Msa1052330 AT1G58390.2 22.991 448 271 13 14 396 10 448 6.83e-25 107
Msa1052330 AT1G61190.1 28.195 266 134 8 189 399 173 436 1.27e-24 107
Msa1052330 AT1G58410.1 24.295 461 267 15 3 396 2 447 1.35e-24 107
Msa1052330 AT1G58410.4 24.295 461 267 15 3 396 2 447 1.35e-24 107
Msa1052330 AT1G58410.2 24.295 461 267 15 3 396 2 447 1.35e-24 107
Msa1052330 AT1G61190.4 28.195 266 134 8 189 399 173 436 1.44e-24 106
Msa1052330 AT1G61190.2 28.195 266 134 8 189 399 173 436 1.49e-24 106
Msa1052330 AT1G61190.3 28.195 266 134 8 189 399 173 436 1.49e-24 106
Msa1052330 AT1G61300.1 28.571 266 133 8 189 399 61 324 1.97e-24 106
Msa1052330 AT1G61300.2 28.571 266 133 8 189 399 61 324 2.06e-24 106
Msa1052330 AT4G10780.1 33.155 187 117 4 218 400 255 437 8.75e-24 104
Msa1052330 AT4G10780.2 33.155 187 117 4 218 400 255 437 1.02e-23 104
Msa1052330 AT5G43740.1 31.156 199 127 5 206 400 242 434 1.67e-23 103
Msa1052330 AT5G43740.2 31.156 199 127 5 206 400 242 434 1.67e-23 103
Msa1052330 AT3G46730.1 34.940 166 104 3 235 399 286 448 3.53e-23 102
Msa1052330 AT1G61310.1 27.068 266 137 7 189 399 174 437 4.13e-23 102
Msa1052330 AT1G58410.3 25.176 425 236 15 3 361 2 410 4.89e-23 102
Msa1052330 AT1G12290.4 32.086 187 119 4 218 400 215 397 5.42e-23 102
Msa1052330 AT1G12290.3 32.086 187 119 4 218 400 215 397 5.42e-23 102
Msa1052330 AT1G12290.2 32.086 187 119 4 218 400 215 397 5.42e-23 102
Msa1052330 AT1G12290.1 31.579 190 116 5 218 400 257 439 5.46e-23 102
Msa1052330 AT1G51480.1 32.447 188 118 5 218 400 254 437 5.06e-22 99.0
Msa1052330 AT1G10920.1 27.451 306 151 10 157 396 29 329 1.52e-21 97.4
Msa1052330 AT1G10920.2 27.451 306 151 10 157 396 29 329 1.52e-21 97.4
Msa1052330 AT1G10920.4 27.451 306 151 10 157 396 29 329 1.52e-21 97.4
Msa1052330 AT1G12280.1 31.282 195 125 5 209 400 251 439 3.66e-21 96.7
Msa1052330 AT1G63350.1 30.198 202 128 5 210 402 241 438 1.51e-20 94.7
Msa1052330 AT1G59620.2 27.653 311 154 11 157 400 16 322 1.62e-20 94.4
Msa1052330 AT1G63350.4 30.198 202 128 5 210 402 241 438 1.97e-20 94.4
Msa1052330 AT1G63350.3 30.198 202 128 5 210 402 241 438 1.99e-20 94.4
Msa1052330 AT1G63350.2 30.198 202 128 5 210 402 241 438 1.99e-20 94.4
Msa1052330 AT5G47260.1 31.447 159 102 4 246 399 271 427 3.87e-20 93.6
Msa1052330 AT4G27220.2 34.921 189 108 6 218 400 224 403 4.68e-20 93.2
Msa1052330 AT4G27220.1 34.921 189 108 6 218 400 216 395 4.79e-20 93.2
Msa1052330 AT1G63360.2 30.688 189 123 4 218 402 219 403 1.07e-18 89.0
Msa1052330 AT1G63360.1 30.688 189 123 4 218 402 254 438 1.44e-18 88.6
Msa1052330 AT5G47250.1 30.435 184 116 4 220 400 262 436 6.20e-18 86.7
Msa1052330 AT1G62630.1 29.101 189 126 4 218 402 254 438 2.95e-17 84.7
Msa1052330 AT4G26090.1 30.526 190 121 6 218 402 255 438 3.14e-17 84.3
Msa1052330 AT4G27190.1 31.746 189 110 6 220 400 249 426 3.19e-17 84.3
Msa1052330 AT5G05400.1 27.027 259 131 8 189 396 175 426 5.40e-17 83.6
Msa1052330 AT5G05400.2 27.027 259 131 8 189 396 6 257 8.65e-17 82.8
Msa1052330 AT5G05400.3 27.027 259 131 8 189 396 6 257 8.65e-17 82.8
Msa1052330 AT1G10920.5 34.815 135 74 3 275 396 26 159 1.12e-14 76.3
Msa1052330 AT1G10920.3 34.815 135 74 3 275 396 26 159 1.12e-14 76.3

Find 69 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGAATTTGGACGGATTTA+TGG 0.170596 7_2:+20484310 Msa1052330:CDS
TGGAAGAGAAGATGATAAAA+AGG 0.262909 7_2:+20484750 Msa1052330:CDS
CTCTTTATACCCTAAGGATA+TGG 0.298075 7_2:+20485672 Msa1052330:CDS
AAAATCATAGTGTGCAAAAC+TGG 0.308412 7_2:+20484416 Msa1052330:CDS
TGCTAGTCCTTGATGACATT+TGG 0.309584 7_2:+20485209 Msa1052330:intron
TTCTCTATTTCCATATCCTT+AGG 0.335679 7_2:-20485682 None:intergenic
AACAAATCCCAAGATTCTTC+TGG 0.342997 7_2:-20485376 None:intergenic
TTGGTTGCTATTGTTGGAAT+TGG 0.356333 7_2:+20484814 Msa1052330:CDS
GTCTCCTTGGTTGCTATTGT+TGG 0.369419 7_2:+20484808 Msa1052330:CDS
TTGAAGAACATCATTACAAA+TGG 0.375369 7_2:+20485397 Msa1052330:CDS
GTTTGACTCCAGAAGAATCT+TGG 0.381586 7_2:+20485368 Msa1052330:CDS
CGACGAAAAGCAATTCTAGT+TGG 0.382822 7_2:-20484571 None:intergenic
TCTCTATTTCCATATCCTTA+GGG 0.385974 7_2:-20485681 None:intergenic
TGGACGGATTTATGGTGTTA+TGG 0.406025 7_2:+20484318 Msa1052330:CDS
TATTGTTGGAATTGGTGGTT+TGG 0.412036 7_2:+20484822 Msa1052330:CDS
GCAAAACATTGTCTCATTTG+AGG 0.420359 7_2:-20485643 None:intergenic
TCATTTGAGGAGACAAGCTT+TGG 0.424285 7_2:-20485630 None:intergenic
AACAAAGTAACAATGTAAAG+AGG 0.435440 7_2:+20484692 Msa1052330:CDS
TGAAGAACATCATTACAAAT+GGG 0.435900 7_2:+20485398 Msa1052330:CDS
GTGTTAGAATCGAATATCAT+TGG 0.441333 7_2:+20484730 Msa1052330:CDS
TTTGACTCCAGAAGAATCTT+GGG 0.441672 7_2:+20485369 Msa1052330:CDS
GTTGCTATTGTTGGAATTGG+TGG 0.444360 7_2:+20484817 Msa1052330:CDS
ATTGTTGGAATTGGTGGTTT+GGG 0.444511 7_2:+20484823 Msa1052330:CDS
AGACTTGCAGCAACACCATA+TGG 0.457919 7_2:-20482991 None:intergenic
TAAAATTGTGGCACAAACAA+TGG 0.467914 7_2:+20485318 Msa1052330:CDS
AAGTGAAGAGAGGGAATGGA+TGG 0.471518 7_2:+20485534 Msa1052330:CDS
TTCTGCTATCTTCTTACCAA+TGG 0.474759 7_2:-20485455 None:intergenic
TTATGGTGTTATGGATGAGT+TGG 0.477091 7_2:+20484327 Msa1052330:CDS
AGAAGATAGCAGAAAAGTGC+AGG 0.483251 7_2:+20485464 Msa1052330:CDS
AAAGACAGCTCTTGCTCAGT+TGG 0.486611 7_2:+20484846 Msa1052330:CDS
ACAGGGTAAAAGTGAAGAGA+GGG 0.488448 7_2:+20485525 Msa1052330:CDS
AAAATTGTGGCACAAACAAT+GGG 0.490580 7_2:+20485319 Msa1052330:CDS
ACCAAATCAAAATGTCTCCT+TGG 0.496420 7_2:+20484795 Msa1052330:CDS
GTCAAACCCTTCAAAACATA+CGG 0.498795 7_2:-20485352 None:intergenic
CCTAGTGTTCTGATTGCTAG+TGG 0.503067 7_2:-20485493 None:intergenic
AATAAAACTCTTGAATCCAT+TGG 0.507931 7_2:+20485439 Msa1052330:CDS
TTACTGCTCTTTATACCCTA+AGG 0.513816 7_2:+20485666 Msa1052330:CDS
TCATCTAACAAGTTATCAGC+AGG 0.524208 7_2:-20484469 None:intergenic
GTAAAAGTGAAGAGAGGGAA+TGG 0.531645 7_2:+20485530 Msa1052330:CDS
CATGTTGTGAGAGATATGTC+TGG 0.534987 7_2:+20484637 Msa1052330:CDS
ATGTGGAGATCAAGACAGTA+AGG 0.548309 7_2:+20485276 Msa1052330:CDS
TTGCTGCAAGTCTCATTGAC+AGG 0.548594 7_2:+20483001 Msa1052330:CDS
TCTCGTTCCAAATGTCATCA+AGG 0.548804 7_2:-20485216 None:intergenic
CCACTAGCAATCAGAACACT+AGG 0.548925 7_2:+20485493 Msa1052330:CDS
ATGGCTGAGCAAATTCCATA+TGG 0.552491 7_2:+20482976 Msa1052330:CDS
TTAAGGACTTATTTGACATG+TGG 0.564881 7_2:+20485259 Msa1052330:CDS
GACAACTCGTACTAAAATTG+TGG 0.567080 7_2:+20485306 Msa1052330:CDS
AGCTGTGCTTCTTGATGCCG+AGG 0.569347 7_2:+20484381 Msa1052330:CDS
TACAGGGTAAAAGTGAAGAG+AGG 0.575627 7_2:+20485524 Msa1052330:CDS
ACAAAGTAACAATGTAAAGA+GGG 0.584225 7_2:+20484693 Msa1052330:CDS
GCTCAGTTGGTATACAATGA+TGG 0.590950 7_2:+20484859 Msa1052330:CDS
TGGTAACTCAGTTTCAACAC+TGG 0.609269 7_2:-20485610 None:intergenic
AGCAATTCTAGTTGGAGACA+AGG 0.611491 7_2:-20484563 None:intergenic
CAGACATATCTCTCACAACA+TGG 0.622521 7_2:-20484636 None:intergenic
GAAGATAGCAGAAAAGTGCA+GGG 0.624896 7_2:+20485465 Msa1052330:CDS
GTGTTATGGATGAGTTGGAA+AGG 0.628147 7_2:+20484332 Msa1052330:CDS
GAAGAACATCATTACAAATG+GGG 0.628816 7_2:+20485399 Msa1052330:CDS
TCAAACCCTTCAAAACATAC+GGG 0.630776 7_2:-20485351 None:intergenic
GAATCTAAACACAAATGTTG+TGG 0.634519 7_2:+20484663 Msa1052330:CDS
TGAGTTGATTCAACTGTGGA+TGG 0.636453 7_2:+20485708 Msa1052330:CDS
CTAGCAATCAGAACACTAGG+AGG 0.645338 7_2:+20485496 Msa1052330:CDS
AATTCCAACAATAGCAACCA+AGG 0.652599 7_2:-20484812 None:intergenic
TCTAAACACAAATGTTGTGG+TGG 0.669225 7_2:+20484666 Msa1052330:CDS
ACAAATGGGGATGAGACCAA+AGG 0.681199 7_2:+20485412 Msa1052330:CDS
AAGATAGCAGAAAAGTGCAG+GGG 0.691255 7_2:+20485466 Msa1052330:CDS
TGAAGATATGAGACTCAAAG+CGG 0.700691 7_2:+20484501 Msa1052330:CDS
ATGTTGTGAGAGATATGTCT+GGG 0.704392 7_2:+20484638 Msa1052330:CDS
AGAATGAGTTGATTCAACTG+TGG 0.727912 7_2:+20485704 Msa1052330:CDS
CAGTTGGTATACAATGATGG+TGG 0.740542 7_2:+20484862 Msa1052330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAATAATTAATTTAGT+TGG - chr7_2:20483325-20483344 None:intergenic 10.0%
!!! AAAAACAATTTTTTTTTACA+GGG - chr7_2:20483481-20483500 None:intergenic 10.0%
!!! TAAAAAATAAAAAATTTTGC+AGG + chr7_2:20483685-20483704 Msa1052330:intron 10.0%
!!! AAAAAATAAAAAATTTTGCA+GGG + chr7_2:20483686-20483705 Msa1052330:intron 10.0%
!!! CAAAAACAATTTTTTTTTAC+AGG - chr7_2:20483482-20483501 None:intergenic 15.0%
!!! CTGTAAAAAAAAATTGTTTT+TGG + chr7_2:20483480-20483499 Msa1052330:intron 15.0%
!!! AAAAAACAAAATATTTTGCA+GGG - chr7_2:20483584-20483603 None:intergenic 15.0%
!!! TAAAAAACAAAATATTTTGC+AGG - chr7_2:20483583-20483602 None:intergenic 15.0%
!!! TAAAAAACAAAAAATTTTGC+AGG + chr7_2:20483552-20483571 Msa1052330:intron 15.0%
!!! AAAAAACAAAAAATTTTGCA+GGG + chr7_2:20483553-20483572 Msa1052330:intron 15.0%
!!! TAAAAAACAAAATATTTTGC+AGG + chr7_2:20483583-20483602 Msa1052330:intron 15.0%
!!! AAAAAACAAAATATTTTGCA+GGG + chr7_2:20483584-20483603 Msa1052330:intron 15.0%
!!! CAAAAACAATTTTTTTTACA+GGG + chr7_2:20483711-20483730 Msa1052330:intron 15.0%
!!! ATGATACCTATTTTTAAATT+AGG + chr7_2:20483820-20483839 Msa1052330:intron 15.0%
!! AAATGACCTAATTTAAAAAT+AGG - chr7_2:20483829-20483848 None:intergenic 15.0%
!! TTAAATTAGGTCATTTAAAA+TGG + chr7_2:20483833-20483852 Msa1052330:intron 15.0%
!!! TAAATTAGGTCATTTAAAAT+GGG + chr7_2:20483834-20483853 Msa1052330:intron 15.0%
!!! TGTTTTTCTTTTTTAAGTTA+CGG - chr7_2:20484135-20484154 None:intergenic 15.0%
!! TTCAAATATAAATTTGTGTT+TGG - chr7_2:20484193-20484212 None:intergenic 15.0%
!!! TAAGCAAAAAAGTATTTTTT+AGG - chr7_2:20485166-20485185 None:intergenic 15.0%
!! TAGTAGTTTATGAAATTATC+AGG + chr7_2:20483075-20483094 Msa1052330:intron 20.0%
!! ATTTAGTTGGAAATAACAAA+GGG - chr7_2:20483312-20483331 None:intergenic 20.0%
!! AATTTAGTTGGAAATAACAA+AGG - chr7_2:20483313-20483332 None:intergenic 20.0%
!! TGTCTTTATATATTAGTAGA+AGG + chr7_2:20483406-20483425 Msa1052330:intron 20.0%
!!! CCTGTAAAAAAAATTGTTTT+TGG - chr7_2:20483713-20483732 None:intergenic 20.0%
!!! CCAAAAACAATTTTTTTTAC+AGG + chr7_2:20483710-20483729 Msa1052330:intron 20.0%
!!! TTGACTTTATTTTTCTACTA+AGG - chr7_2:20483786-20483805 None:intergenic 20.0%
!! ATATATAAGGACTTAGATTT+AGG + chr7_2:20483938-20483957 Msa1052330:intron 20.0%
!! TATATAAGGACTTAGATTTA+GGG + chr7_2:20483939-20483958 Msa1052330:intron 20.0%
!!! TACATTTCATTTTCAAATCA+CGG + chr7_2:20484006-20484025 Msa1052330:intron 20.0%
!! CATTCAATACTTAATGTATT+TGG + chr7_2:20485103-20485122 Msa1052330:intron 20.0%
!! CATTGAATACATAATGTATT+TGG - chr7_2:20485141-20485160 None:intergenic 20.0%
! ATGAAATTATCAGGAGTTAT+AGG + chr7_2:20483084-20483103 Msa1052330:intron 25.0%
! AATTATCCCAATTCAAAGAA+AGG - chr7_2:20483212-20483231 None:intergenic 25.0%
! AAAAATTCTCAAAAAGACTG+AGG - chr7_2:20483269-20483288 None:intergenic 25.0%
! TTTAGTTGGAAATAACAAAG+GGG - chr7_2:20483311-20483330 None:intergenic 25.0%
! ATTAGTAGAAGGCTAAAATA+TGG + chr7_2:20483417-20483436 Msa1052330:intron 25.0%
! TATGCAAATCATCACAAAAA+TGG + chr7_2:20483647-20483666 Msa1052330:intron 25.0%
! ATGCAAATCATCACAAAAAT+GGG + chr7_2:20483648-20483667 Msa1052330:intron 25.0%
! TTTCTACTAAGGCTAAAATA+TGG - chr7_2:20483775-20483794 None:intergenic 25.0%
!! CAAAAAGGGTCTTATATATA+AGG + chr7_2:20483925-20483944 Msa1052330:intron 25.0%
! TAAATTTGTGTTTGGATTGA+GGG - chr7_2:20484185-20484204 None:intergenic 25.0%
! ATAAATTTGTGTTTGGATTG+AGG - chr7_2:20484186-20484205 None:intergenic 25.0%
! TTGAAAAGAAAAAGTAGTGA+AGG + chr7_2:20484213-20484232 Msa1052330:intron 25.0%
! TGAAAAGAAAAAGTAGTGAA+GGG + chr7_2:20484214-20484233 Msa1052330:intron 25.0%
!!! ATTTTGTTTTTGTTTCTCCT+CGG - chr7_2:20484401-20484420 None:intergenic 25.0%
! AACAAAGTAACAATGTAAAG+AGG + chr7_2:20484692-20484711 Msa1052330:CDS 25.0%
! ACAAAGTAACAATGTAAAGA+GGG + chr7_2:20484693-20484712 Msa1052330:CDS 25.0%
! AACTATTGTGAAGAAAATGT+TGG + chr7_2:20484948-20484967 Msa1052330:intron 25.0%
! AGTTGACGATAAATTATCAT+TGG + chr7_2:20484990-20485009 Msa1052330:intron 25.0%
!! TTTTTGCTTATATATGTGAC+CGG - chr7_2:20485176-20485195 None:intergenic 25.0%
!! TTTTTGCTTATATATGTGAC+CGG + chr7_2:20485176-20485195 Msa1052330:intron 25.0%
! TTGAAGAACATCATTACAAA+TGG + chr7_2:20485397-20485416 Msa1052330:CDS 25.0%
! TGAAGAACATCATTACAAAT+GGG + chr7_2:20485398-20485417 Msa1052330:CDS 25.0%
! AATAAAACTCTTGAATCCAT+TGG + chr7_2:20485439-20485458 Msa1052330:CDS 25.0%
GTTATAGGAAGATGATTAGT+TGG + chr7_2:20483099-20483118 Msa1052330:intron 30.0%
ACCTATCCTTTCTTTGAATT+GGG + chr7_2:20483203-20483222 Msa1052330:intron 30.0%
!!! TTTTTTAAAATAGTCCCTCG+AGG + chr7_2:20483521-20483540 Msa1052330:intron 30.0%
!!! TTTTTAAAATAGTCCCTCGA+GGG + chr7_2:20483522-20483541 Msa1052330:intron 30.0%
!!! TTTTTAAAATAGTCCCTCGA+GGG - chr7_2:20483522-20483541 None:intergenic 30.0%
!!! TTTTTTAAAATAGTCCCTCG+AGG - chr7_2:20483521-20483540 None:intergenic 30.0%
! TGAACCCATTTTGTAGTTTT+TGG - chr7_2:20483611-20483630 None:intergenic 30.0%
TGCAAATCATCACAAAAATG+GGG + chr7_2:20483649-20483668 Msa1052330:intron 30.0%
! GTCATTTAAAATGGGAATGA+GGG + chr7_2:20483842-20483861 Msa1052330:intron 30.0%
! GTTGAATGTTTTCTTTTGTC+AGG + chr7_2:20484269-20484288 Msa1052330:intron 30.0%
! AATGTTTTCTTTTGTCAGGT+TGG + chr7_2:20484273-20484292 Msa1052330:intron 30.0%
AAAATCATAGTGTGCAAAAC+TGG + chr7_2:20484416-20484435 Msa1052330:CDS 30.0%
TCCTAAGAAAAAATTGACAC+AGG + chr7_2:20484531-20484550 Msa1052330:CDS 30.0%
!!! ACCTGTGTCAATTTTTTCTT+AGG - chr7_2:20484535-20484554 None:intergenic 30.0%
!! AATTGCTTTTCGTCGTAAAA+TGG + chr7_2:20484579-20484598 Msa1052330:CDS 30.0%
GAATCTAAACACAAATGTTG+TGG + chr7_2:20484663-20484682 Msa1052330:CDS 30.0%
GTGTTAGAATCGAATATCAT+TGG + chr7_2:20484730-20484749 Msa1052330:CDS 30.0%
TGGAAGAGAAGATGATAAAA+AGG + chr7_2:20484750-20484769 Msa1052330:CDS 30.0%
!!! AGTTTTTTGAGAAGAGTATG+TGG + chr7_2:20484896-20484915 Msa1052330:intron 30.0%
!!! GTTTTTTGAGAAGAGTATGT+GGG + chr7_2:20484897-20484916 Msa1052330:intron 30.0%
GAACGAGAGTTATGAAAAAT+GGG + chr7_2:20485231-20485250 Msa1052330:CDS 30.0%
! ATGAAAAATGGGCTCAATTA+AGG + chr7_2:20485242-20485261 Msa1052330:CDS 30.0%
TTAAGGACTTATTTGACATG+TGG + chr7_2:20485259-20485278 Msa1052330:CDS 30.0%
TAAAATTGTGGCACAAACAA+TGG + chr7_2:20485318-20485337 Msa1052330:CDS 30.0%
AAAATTGTGGCACAAACAAT+GGG + chr7_2:20485319-20485338 Msa1052330:CDS 30.0%
GAAGAACATCATTACAAATG+GGG + chr7_2:20485399-20485418 Msa1052330:CDS 30.0%
!!! AAGAGTTTTATTCACTCCTT+TGG - chr7_2:20485431-20485450 None:intergenic 30.0%
! AAGTTTTACAAGGTGACTTT+TGG + chr7_2:20485557-20485576 Msa1052330:CDS 30.0%
TCTCTATTTCCATATCCTTA+GGG - chr7_2:20485684-20485703 None:intergenic 30.0%
TTCTCTATTTCCATATCCTT+AGG - chr7_2:20485685-20485704 None:intergenic 30.0%
! TAGTTTTCCTCCCTTTTTTC+AGG + chr7_2:20483178-20483197 Msa1052330:intron 35.0%
GACCTATCCTTTCTTTGAAT+TGG + chr7_2:20483202-20483221 Msa1052330:intron 35.0%
TCCCAATTCAAAGAAAGGAT+AGG - chr7_2:20483207-20483226 None:intergenic 35.0%
CAAAACGAGACATATTTGCA+GGG - chr7_2:20483450-20483469 None:intergenic 35.0%
AGGGACCAAAAACTACAAAA+TGG + chr7_2:20483603-20483622 Msa1052330:intron 35.0%
GGGACCAAAAACTACAAAAT+GGG + chr7_2:20483604-20483623 Msa1052330:intron 35.0%
! TTTGTGATGATTTGCATACG+TGG - chr7_2:20483645-20483664 None:intergenic 35.0%
! GGTCATTTAAAATGGGAATG+AGG + chr7_2:20483841-20483860 Msa1052330:intron 35.0%
AATCACGGGAATTAAGAAAG+TGG - chr7_2:20483901-20483920 None:intergenic 35.0%
!! TTCCCGTGATTTTGACAAAA+AGG + chr7_2:20483910-20483929 Msa1052330:intron 35.0%
!! TCCCGTGATTTTGACAAAAA+GGG + chr7_2:20483911-20483930 Msa1052330:intron 35.0%
! ACCCTTTTTGTCAAAATCAC+GGG - chr7_2:20483915-20483934 None:intergenic 35.0%
! GACCCTTTTTGTCAAAATCA+CGG - chr7_2:20483916-20483935 None:intergenic 35.0%
! ACTTAGATTTAGGGTGTGTT+TGG + chr7_2:20483948-20483967 Msa1052330:intron 35.0%
AAAGAAAAAGTAGTGAAGGG+AGG + chr7_2:20484217-20484236 Msa1052330:intron 35.0%
! TCTGTAGCTTTTCGTGAATT+TGG + chr7_2:20484298-20484317 Msa1052330:CDS 35.0%
! TAGCTTTTCGTGAATTTGGA+CGG + chr7_2:20484302-20484321 Msa1052330:CDS 35.0%
!! TTATGGTGTTATGGATGAGT+TGG + chr7_2:20484327-20484346 Msa1052330:CDS 35.0%
TCATCTAACAAGTTATCAGC+AGG - chr7_2:20484472-20484491 None:intergenic 35.0%
TGAAGATATGAGACTCAAAG+CGG + chr7_2:20484501-20484520 Msa1052330:CDS 35.0%
ATGTTGTGAGAGATATGTCT+GGG + chr7_2:20484638-20484657 Msa1052330:CDS 35.0%
TCTAAACACAAATGTTGTGG+TGG + chr7_2:20484666-20484685 Msa1052330:CDS 35.0%
ACCAAATCAAAATGTCTCCT+TGG + chr7_2:20484795-20484814 Msa1052330:CDS 35.0%
!!! ACCAAGGAGACATTTTGATT+TGG - chr7_2:20484799-20484818 None:intergenic 35.0%
AATTCCAACAATAGCAACCA+AGG - chr7_2:20484815-20484834 None:intergenic 35.0%
! TTGGTTGCTATTGTTGGAAT+TGG + chr7_2:20484814-20484833 Msa1052330:CDS 35.0%
! TATTGTTGGAATTGGTGGTT+TGG + chr7_2:20484822-20484841 Msa1052330:CDS 35.0%
! ATTGTTGGAATTGGTGGTTT+GGG + chr7_2:20484823-20484842 Msa1052330:CDS 35.0%
TTTATCGTCAACTTTGCTCT+TGG - chr7_2:20484983-20485002 None:intergenic 35.0%
ATGCTTCGTGACAATTTAAC+TGG + chr7_2:20485027-20485046 Msa1052330:intron 35.0%
GGAACGAGAGTTATGAAAAA+TGG + chr7_2:20485230-20485249 Msa1052330:CDS 35.0%
GACAACTCGTACTAAAATTG+TGG + chr7_2:20485306-20485325 Msa1052330:CDS 35.0%
TCAAACCCTTCAAAACATAC+GGG - chr7_2:20485354-20485373 None:intergenic 35.0%
GTCAAACCCTTCAAAACATA+CGG - chr7_2:20485355-20485374 None:intergenic 35.0%
TTTGACTCCAGAAGAATCTT+GGG + chr7_2:20485369-20485388 Msa1052330:CDS 35.0%
AACAAATCCCAAGATTCTTC+TGG - chr7_2:20485379-20485398 None:intergenic 35.0%
TTCTGCTATCTTCTTACCAA+TGG - chr7_2:20485458-20485477 None:intergenic 35.0%
!! CTTCACTTTTACCCTGTAAA+AGG - chr7_2:20485522-20485541 None:intergenic 35.0%
! GAATGGATGGAAGTTTTACA+AGG + chr7_2:20485547-20485566 Msa1052330:CDS 35.0%
GCAAAACATTGTCTCATTTG+AGG - chr7_2:20485646-20485665 None:intergenic 35.0%
TTACTGCTCTTTATACCCTA+AGG + chr7_2:20485666-20485685 Msa1052330:CDS 35.0%
CTCTTTATACCCTAAGGATA+TGG + chr7_2:20485672-20485691 Msa1052330:CDS 35.0%
!! AGAATGAGTTGATTCAACTG+TGG + chr7_2:20485704-20485723 Msa1052330:CDS 35.0%
ATGGCTGAGCAAATTCCATA+TGG + chr7_2:20482976-20482995 Msa1052330:CDS 40.0%
GGATAGGTCACCTGAAAAAA+GGG - chr7_2:20483191-20483210 None:intergenic 40.0%
AGGATAGGTCACCTGAAAAA+AGG - chr7_2:20483192-20483211 None:intergenic 40.0%
CCAAAACGAGACATATTTGC+AGG - chr7_2:20483451-20483470 None:intergenic 40.0%
! CCTGCAAATATGTCTCGTTT+TGG + chr7_2:20483448-20483467 Msa1052330:intron 40.0%
ATCATCACAAAAATGGGGTC+AGG + chr7_2:20483654-20483673 Msa1052330:intron 40.0%
TCATCACAAAAATGGGGTCA+GGG + chr7_2:20483655-20483674 Msa1052330:intron 40.0%
CAAAACGAGGCATATTTGCA+GGG + chr7_2:20483742-20483761 Msa1052330:intron 40.0%
! AGATTTAGGGTGTGTTTGGA+TGG + chr7_2:20483952-20483971 Msa1052330:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG - chr7_2:20484175-20484194 None:intergenic 40.0%
TGTGTTTGGATTGAGGGTTT+AGG - chr7_2:20484179-20484198 None:intergenic 40.0%
! CGTGAATTTGGACGGATTTA+TGG + chr7_2:20484310-20484329 Msa1052330:CDS 40.0%
! TGGACGGATTTATGGTGTTA+TGG + chr7_2:20484318-20484337 Msa1052330:CDS 40.0%
! GTGTTATGGATGAGTTGGAA+AGG + chr7_2:20484332-20484351 Msa1052330:CDS 40.0%
! AGCAATTCTAGTTGGAGACA+AGG - chr7_2:20484566-20484585 None:intergenic 40.0%
CGACGAAAAGCAATTCTAGT+TGG - chr7_2:20484574-20484593 None:intergenic 40.0%
CAGACATATCTCTCACAACA+TGG - chr7_2:20484639-20484658 None:intergenic 40.0%
CATGTTGTGAGAGATATGTC+TGG + chr7_2:20484637-20484656 Msa1052330:CDS 40.0%
! GTTGCTATTGTTGGAATTGG+TGG + chr7_2:20484817-20484836 Msa1052330:CDS 40.0%
! GCTCAGTTGGTATACAATGA+TGG + chr7_2:20484859-20484878 Msa1052330:CDS 40.0%
! CAGTTGGTATACAATGATGG+TGG + chr7_2:20484862-20484881 Msa1052330:CDS 40.0%
TGCTTATATATGTGACCGGA+GGG - chr7_2:20485180-20485199 None:intergenic 40.0%
TTGCTTATATATGTGACCGG+AGG - chr7_2:20485179-20485198 None:intergenic 40.0%
TTGCTTATATATGTGACCGG+AGG + chr7_2:20485179-20485198 Msa1052330:intron 40.0%
TGCTTATATATGTGACCGGA+GGG + chr7_2:20485180-20485199 Msa1052330:intron 40.0%
! TGCTAGTCCTTGATGACATT+TGG + chr7_2:20485209-20485228 Msa1052330:intron 40.0%
TCTCGTTCCAAATGTCATCA+AGG - chr7_2:20485219-20485238 None:intergenic 40.0%
ATGTGGAGATCAAGACAGTA+AGG + chr7_2:20485276-20485295 Msa1052330:CDS 40.0%
!! AAGTGTCCCGTATGTTTTGA+AGG + chr7_2:20485345-20485364 Msa1052330:CDS 40.0%
!! AGTGTCCCGTATGTTTTGAA+GGG + chr7_2:20485346-20485365 Msa1052330:CDS 40.0%
GTTTGACTCCAGAAGAATCT+TGG + chr7_2:20485368-20485387 Msa1052330:CDS 40.0%
! AGAAGATAGCAGAAAAGTGC+AGG + chr7_2:20485464-20485483 Msa1052330:CDS 40.0%
! GAAGATAGCAGAAAAGTGCA+GGG + chr7_2:20485465-20485484 Msa1052330:CDS 40.0%
! AAGATAGCAGAAAAGTGCAG+GGG + chr7_2:20485466-20485485 Msa1052330:CDS 40.0%
TACAGGGTAAAAGTGAAGAG+AGG + chr7_2:20485524-20485543 Msa1052330:CDS 40.0%
ACAGGGTAAAAGTGAAGAGA+GGG + chr7_2:20485525-20485544 Msa1052330:CDS 40.0%
GTAAAAGTGAAGAGAGGGAA+TGG + chr7_2:20485530-20485549 Msa1052330:CDS 40.0%
TGGTAACTCAGTTTCAACAC+TGG - chr7_2:20485613-20485632 None:intergenic 40.0%
TCATTTGAGGAGACAAGCTT+TGG - chr7_2:20485633-20485652 None:intergenic 40.0%
!! TGAGTTGATTCAACTGTGGA+TGG + chr7_2:20485708-20485727 Msa1052330:CDS 40.0%
AGACTTGCAGCAACACCATA+TGG - chr7_2:20482994-20483013 None:intergenic 45.0%
TTGCTGCAAGTCTCATTGAC+AGG + chr7_2:20483001-20483020 Msa1052330:CDS 45.0%
TAGGTCACCTGAAAAAAGGG+AGG - chr7_2:20483188-20483207 None:intergenic 45.0%
CAGGGACTAAAACCAAAACG+AGG + chr7_2:20483729-20483748 Msa1052330:intron 45.0%
! CCTGCAAATATGCCTCGTTT+TGG - chr7_2:20483744-20483763 None:intergenic 45.0%
CCAAAACGAGGCATATTTGC+AGG + chr7_2:20483741-20483760 Msa1052330:intron 45.0%
! TTTAGGGTGTGTTTGGATGG+AGG + chr7_2:20483955-20483974 Msa1052330:intron 45.0%
TTAGGGTGTGTTTGGATGGA+GGG + chr7_2:20483956-20483975 Msa1052330:intron 45.0%
TGTGTTTGGATGGAGGGTTT+AGG + chr7_2:20483962-20483981 Msa1052330:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG + chr7_2:20483966-20483985 Msa1052330:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG - chr7_2:20484174-20484193 None:intergenic 45.0%
GTTTGGATTGAGGGTTTAGG+AGG - chr7_2:20484176-20484195 None:intergenic 45.0%
GAAAAAGTAGTGAAGGGAGG+TGG + chr7_2:20484220-20484239 Msa1052330:intron 45.0%
! GTCTCCTTGGTTGCTATTGT+TGG + chr7_2:20484808-20484827 Msa1052330:CDS 45.0%
AAAGACAGCTCTTGCTCAGT+TGG + chr7_2:20484846-20484865 Msa1052330:CDS 45.0%
CTGGAAAAAGATACTCCCTC+CGG + chr7_2:20485046-20485065 Msa1052330:intron 45.0%
ACAAATGGGGATGAGACCAA+AGG + chr7_2:20485412-20485431 Msa1052330:CDS 45.0%
CCTAGTGTTCTGATTGCTAG+TGG - chr7_2:20485496-20485515 None:intergenic 45.0%
CCACTAGCAATCAGAACACT+AGG + chr7_2:20485493-20485512 Msa1052330:CDS 45.0%
CTAGCAATCAGAACACTAGG+AGG + chr7_2:20485496-20485515 Msa1052330:CDS 45.0%
! AACACTAGGAGGCCTTTTAC+AGG + chr7_2:20485507-20485526 Msa1052330:CDS 45.0%
! ACACTAGGAGGCCTTTTACA+GGG + chr7_2:20485508-20485527 Msa1052330:CDS 45.0%
AAGTGAAGAGAGGGAATGGA+TGG + chr7_2:20485534-20485553 Msa1052330:CDS 45.0%
!!! GTAATTATATTTTTTATATA+CGG + chr7_2:20483042-20483061 Msa1052330:intron 5.0%
!!! AAATATTTTGTTTTTTAAAA+AGG - chr7_2:20483511-20483530 None:intergenic 5.0%
GTTTGGATGGAGGGTTTAGG+AGG + chr7_2:20483965-20483984 Msa1052330:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG + chr7_2:20483967-20483986 Msa1052330:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG - chr7_2:20484169-20484188 None:intergenic 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG - chr7_2:20484170-20484189 None:intergenic 50.0%
ATGGAGGGTTTAGGAGGGGA+AGG + chr7_2:20483971-20483990 Msa1052330:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG + chr7_2:20483972-20483991 Msa1052330:intron 55.0%
AGCTGTGCTTCTTGATGCCG+AGG + chr7_2:20484381-20484400 Msa1052330:CDS 55.0%
! GGACTAGCAAGTACACCCTC+CGG - chr7_2:20485198-20485217 None:intergenic 55.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr7_2:20483975-20483994 Msa1052330:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr7_2:20483976-20483995 Msa1052330:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr7_2:20483977-20483996 Msa1052330:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG - chr7_2:20483977-20483996 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG - chr7_2:20483976-20483995 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG - chr7_2:20483975-20483994 None:intergenic 60.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr7_2:20483980-20483999 Msa1052330:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr7_2:20483981-20484000 Msa1052330:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG - chr7_2:20483981-20484000 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG - chr7_2:20483980-20483999 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 20482976 20485765 20482976 ID=Msa1052330;Name=Msa1052330
chr7_2 mRNA 20482976 20485765 20482976 ID=Msa1052330-mRNA-1;Parent=Msa1052330;Name=Msa1052330-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0|0.66|1|1|3|0|405
chr7_2 exon 20482976 20483022 20482976 ID=Msa1052330-mRNA-1:exon:4629;Parent=Msa1052330-mRNA-1
chr7_2 exon 20484291 20484910 20484291 ID=Msa1052330-mRNA-1:exon:4630;Parent=Msa1052330-mRNA-1
chr7_2 exon 20485215 20485765 20485215 ID=Msa1052330-mRNA-1:exon:4631;Parent=Msa1052330-mRNA-1
chr7_2 CDS 20482976 20483022 20482976 ID=Msa1052330-mRNA-1:cds;Parent=Msa1052330-mRNA-1
chr7_2 CDS 20484291 20484910 20484291 ID=Msa1052330-mRNA-1:cds;Parent=Msa1052330-mRNA-1
chr7_2 CDS 20485215 20485765 20485215 ID=Msa1052330-mRNA-1:cds;Parent=Msa1052330-mRNA-1
Gene Sequence

>Msa1052330

ATGGCTGAGCAAATTCCATATGGTGTTGCTGCAAGTCTCATTGACAGGTTGGCTTCTGTAGCTTTTCGTGAATTTGGACGGATTTATGGTGTTATGGATGAGTTGGAAAGGCTTAAGAACACAGTTGAATCTGTCAGAGCTGTGCTTCTTGATGCCGAGGAGAAACAAAAACAAAATCATAGTGTGCAAAACTGGATAAGAAGACTCAAAGATGATGTGCTTTATCCTGCTGATAACTTGTTAGATGAATTTATTATTGAAGATATGAGACTCAAAGCGGATGAAACTCCTAAGAAAAAATTGACACAGGTATTTTATTCCTTGTCTCCAACTAGAATTGCTTTTCGTCGTAAAATGGCTCATGAGATTGAAAAAATACAAAACAAATTTAGCCATGTTGTGAGAGATATGTCTGGGTTGAATCTAAACACAAATGTTGTGGTGGTTGAACAAAGTAACAATGTAAAGAGGGAAACTAGTTCTTATGTGTTAGAATCGAATATCATTGGAAGAGAAGATGATAAAAAGGAGATCATAAGCTTGTTGAAGCAACCAAATCAAAATGTCTCCTTGGTTGCTATTGTTGGAATTGGTGGTTTGGGAAAGACAGCTCTTGCTCAGTTGGTATACAATGATGGTGGTGAAGTAACAAAGTTTTTTGAGAAGATCCTTGATGACATTTGGAACGAGAGTTATGAAAAATGGGCTCAATTAAGGACTTATTTGACATGTGGAGATCAAGACAGTAAGGTTGTAGTGACAACTCGTACTAAAATTGTGGCACAAACAATGGGCGTAAGTGTCCCGTATGTTTTGAAGGGTTTGACTCCAGAAGAATCTTGGGATTTGTTGAAGAACATCATTACAAATGGGGATGAGACCAAAGGAGTGAATAAAACTCTTGAATCCATTGGTAAGAAGATAGCAGAAAAGTGCAGGGGTGTTCCACTAGCAATCAGAACACTAGGAGGCCTTTTACAGGGTAAAAGTGAAGAGAGGGAATGGATGGAAGTTTTACAAGGTGACTTTTGGAAATTATGTGAAGACGAAGATAGCATTATGCCAGTGTTGAAACTGAGTTACCAAAGCTTGTCTCCTCAAATGAGACAATGTTTTGCTTACTGCTCTTTATACCCTAAGGATATGGAAATAGAGAAGAATGAGTTGATTCAACTGTGGATGGCACAACGTTATCTTGACTATTCTGCTGAAAAATAG

Protein sequence

>Msa1052330

MAEQIPYGVAASLIDRLASVAFREFGRIYGVMDELERLKNTVESVRAVLLDAEEKQKQNHSVQNWIRRLKDDVLYPADNLLDEFIIEDMRLKADETPKKKLTQVFYSLSPTRIAFRRKMAHEIEKIQNKFSHVVRDMSGLNLNTNVVVVEQSNNVKRETSSYVLESNIIGREDDKKEIISLLKQPNQNVSLVAIVGIGGLGKTALAQLVYNDGGEVTKFFEKILDDIWNESYEKWAQLRTYLTCGDQDSKVVVTTRTKIVAQTMGVSVPYVLKGLTPEESWDLLKNIITNGDETKGVNKTLESIGKKIAEKCRGVPLAIRTLGGLLQGKSEEREWMEVLQGDFWKLCEDEDSIMPVLKLSYQSLSPQMRQCFAYCSLYPKDMEIEKNELIQLWMAQRYLDYSAEK*