AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0755050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755050 MtrunA17_Chr5g0399941 97.926 434 7 1 58 491 81 512 0.0 900
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755050 AT4G17620.1 73.286 423 108 2 71 491 114 533 0.0 613
Msa0755050 AT4G17620.2 72.813 423 110 2 71 491 114 533 0.0 607
Msa0755050 AT4G17620.3 71.868 423 106 3 71 491 114 525 0.0 592

Find 204 sgRNAs with CRISPR-Local

Find 483 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCTCTCCGTCTGCTCTTC+TGG 0.061101 5_2:-8815348 None:intergenic
AAATCACTTTGTGGTCTTTC+TGG 0.112221 5_2:-8814751 None:intergenic
CATATATTTGTATTGGATTT+AGG 0.136579 5_2:+8815823 Msa0755050:CDS
TTCTGTGATTAAGACAAAAT+TGG 0.167983 5_2:+8815403 Msa0755050:CDS
CCTAACAATATCGGCATTAT+TGG 0.175632 5_2:-8810562 None:intergenic
TTTGGCAATTAGATGTTATC+TGG 0.198464 5_2:+8815292 Msa0755050:intron
CATTCTCTGTGTAATATCTT+TGG 0.218523 5_2:-8816055 None:intergenic
TATCCTCAGAGGCAGAATTT+TGG 0.221848 5_2:+8812552 Msa0755050:CDS
GACAGAAACTGCTAAAGTTT+TGG 0.224554 5_2:+8815667 Msa0755050:CDS
TCGATCAGATGATGAACTTT+TGG 0.232351 5_2:+8816723 Msa0755050:three_prime_UTR
AACGATGATGAAGATGATTT+TGG 0.245066 5_2:-8810069 None:intergenic
TAAGGCTTTGTTTGCGTGTT+TGG 0.253970 5_2:+8816905 Msa0755050:three_prime_UTR
CAAAAGAGAAGAAGAGAATA+AGG 0.260848 5_2:+8810111 Msa0755050:five_prime_UTR
CTGCATAAACGTGTTCATTA+AGG 0.261109 5_2:+8816887 Msa0755050:three_prime_UTR
GCAGATTCCTCTTCCGATAC+TGG 0.270875 5_2:+8811230 Msa0755050:CDS
TGTCCATGTGAATACTTAAT+TGG 0.293684 5_2:-8810592 None:intergenic
GAGGTATTATGCTGGCTTTA+TGG 0.299092 5_2:+8816375 Msa0755050:CDS
CGCCATATCACTGAAGATAT+TGG 0.313720 5_2:+8814077 Msa0755050:CDS
GTTGATTACCTACCACAAAA+TGG 0.317863 5_2:-8814357 None:intergenic
GGCTCTCCGTCTGCTCTTCT+GGG 0.318433 5_2:-8815347 None:intergenic
CGCGCCACCTTTCAACCGTT+TGG 0.326781 5_2:+8816553 Msa0755050:CDS
CTCCAATATCTTCAGTGATA+TGG 0.332949 5_2:-8814079 None:intergenic
TCTGTGATTAAGACAAAATT+GGG 0.335148 5_2:+8815404 Msa0755050:CDS
CTTGCAGATTCAGTCATTCC+TGG 0.335151 5_2:+8815791 Msa0755050:intron
CTAAATCCAATACAAATATA+TGG 0.337022 5_2:-8815822 None:intergenic
TGAAAACAGGACACATTTCC+TGG 0.338532 5_2:+8810792 Msa0755050:five_prime_UTR
GGCGTTCCATATATTTGTAT+TGG 0.340051 5_2:+8815816 Msa0755050:CDS
AAAATTAAGGGCAACTGTTA+AGG 0.353311 5_2:-8816646 None:intergenic
CCGGGTTGTTCGTATTATTA+CGG 0.353547 5_2:-8812446 None:intergenic
CGCCATGAGCCTTGGGAAAT+GGG 0.358477 5_2:+8814682 Msa0755050:CDS
GATCCTCACCGTCCACTTCC+AGG 0.362238 5_2:+8810247 Msa0755050:five_prime_UTR
TCGCCATGAGCCTTGGGAAA+TGG 0.363810 5_2:+8814681 Msa0755050:CDS
AGAGGAATCTGCGGAACCTT+TGG 0.369292 5_2:-8811219 None:intergenic
CCAATAATGCCGATATTGTT+AGG 0.370814 5_2:+8810562 Msa0755050:five_prime_UTR
GGAGAATAATTACCAGGAAT+AGG 0.373979 5_2:-8811408 None:intergenic
AGGTGACTTGTTATTACATC+TGG 0.374070 5_2:-8816599 None:intergenic
GTAAGGAAGGAGAGGACTTA+AGG 0.374651 5_2:+8816930 Msa0755050:three_prime_UTR
ATTAATAGTAATTTGAAAAC+AGG 0.396143 5_2:+8810779 Msa0755050:five_prime_UTR
GCACTGGTTCTGTATGTAAC+TGG 0.396523 5_2:+8810833 Msa0755050:five_prime_UTR
GGTCATTTCCATGTGTCAAT+TGG 0.400684 5_2:+8810926 Msa0755050:five_prime_UTR
AACTACCGCCAGGGGCAATA+TGG 0.403580 5_2:+8810905 Msa0755050:five_prime_UTR
CTTATATTCGCCATGAGCCT+TGG 0.404077 5_2:+8814674 Msa0755050:CDS
GATGAATGTCCGTGCTTCAT+AGG 0.407163 5_2:+8810751 Msa0755050:five_prime_UTR
AACGGATGCAACCTCCGCTT+TGG 0.407307 5_2:-8810181 None:intergenic
GAACCAGTGCAGTCTGTAAC+TGG 0.410433 5_2:-8810820 None:intergenic
GCTGGCATTCTTCCGCGTCC+TGG 0.412844 5_2:+8812525 Msa0755050:CDS
AAATTCTGCCTCTGAGGATA+AGG 0.415076 5_2:-8812549 None:intergenic
GGTATACCGCCTAACAATAT+CGG 0.420127 5_2:-8810571 None:intergenic
TTGGCAGGGTGGAGTGTGCC+TGG 0.423068 5_2:+8816341 Msa0755050:intron
GAGAATAATTACCAGGAATA+GGG 0.425040 5_2:-8811407 None:intergenic
AAAAGTCCTTACCCTATTCC+TGG 0.426749 5_2:+8811396 Msa0755050:CDS
ATGATGCAGGCCGTCTTGTT+CGG 0.436710 5_2:+8816016 Msa0755050:CDS
AAATATATGGAACGCCTGCC+AGG 0.440933 5_2:-8815809 None:intergenic
GGCGGTGATGATGAAGAAAA+TGG 0.444517 5_2:+8811275 Msa0755050:CDS
CTGCGATCTAAATCACTTTG+TGG 0.446570 5_2:-8814760 None:intergenic
TTATATTCGCCATGAGCCTT+GGG 0.449517 5_2:+8814675 Msa0755050:CDS
GCTATAGTCGTGCAGAAGGC+GGG 0.453075 5_2:+8813899 Msa0755050:CDS
TGTTTGCGTGTTTGGAGGTA+AGG 0.454477 5_2:+8816913 Msa0755050:three_prime_UTR
AGGGTCCCTATGATCTTTAA+CGG 0.457981 5_2:-8810316 None:intergenic
ACTAGCTCCGTTTCCAGTAT+CGG 0.462868 5_2:-8811243 None:intergenic
CAATCAACGGTGGTAAAGAT+AGG 0.465107 5_2:+8810271 Msa0755050:five_prime_UTR
GCACGGACATTCATCGGATT+AGG 0.467517 5_2:-8810743 None:intergenic
TTTACCACCGTTGATTGTCC+TGG 0.469443 5_2:-8810265 None:intergenic
GGCTTTGTTTGCGTGTTTGG+AGG 0.472568 5_2:+8816908 Msa0755050:three_prime_UTR
CATCATCTGATCGAAGGTGC+TGG 0.473531 5_2:-8816714 None:intergenic
GTGATTATGTACAGAGAAAG+AGG 0.473547 5_2:+8810147 Msa0755050:five_prime_UTR
GACTTAGGCTCAGAAGGTTA+TGG 0.475541 5_2:+8814286 Msa0755050:intron
GAAGAAAATGGTGATGTTGT+TGG 0.478098 5_2:+8811287 Msa0755050:CDS
GGTCCCATCTTTATCGTTGT+CGG 0.478925 5_2:-8811123 None:intergenic
GTTGATTCGTTTCCGATCAA+CGG 0.479060 5_2:-8810199 None:intergenic
GTTGTTCGTATTATTACGGA+TGG 0.484281 5_2:-8812442 None:intergenic
GAAAATGACGTAATCCAGTC+TGG 0.484299 5_2:+8810673 Msa0755050:five_prime_UTR
TGCGTGTTTGGAGGTAAGGA+AGG 0.488333 5_2:+8816917 Msa0755050:three_prime_UTR
GAATGAAAATGAAGGGCTAC+TGG 0.492663 5_2:+8816073 Msa0755050:CDS
AACTACCAGTAGGTAGTTGT+AGG 0.494593 5_2:+8810528 Msa0755050:five_prime_UTR
TCCGCAGCTTCTTCCTCCAA+AGG 0.495225 5_2:+8811203 Msa0755050:CDS
TTTAACCGTTAAAGATCATA+GGG 0.495548 5_2:+8810311 Msa0755050:five_prime_UTR
TTCTGGGATCTTCAGTGGCA+AGG 0.495567 5_2:-8815331 None:intergenic
TGGCGGTAGTTAACTACCGC+TGG 0.497034 5_2:-8810893 None:intergenic
TATGAAGCACGGACATTCAT+CGG 0.499394 5_2:-8810749 None:intergenic
ACCGTTGATTGTCCTGGAAG+TGG 0.501283 5_2:-8810259 None:intergenic
GCCTTCTGCACGACTATAGC+AGG 0.501287 5_2:-8813896 None:intergenic
GGAATCTGCGGAACCTTTGG+AGG 0.502880 5_2:-8811216 None:intergenic
ACCGACGCGTGTCTGACATT+GGG 0.505160 5_2:+8810717 Msa0755050:five_prime_UTR
GGAGCTAGTAGCGGCGGTGG+CGG 0.505162 5_2:+8811257 Msa0755050:CDS
GGGGTGGTGGACGTGGTCGT+TGG 0.505862 5_2:+8812475 Msa0755050:CDS
TTGTGTACTCCCATTTCCCA+AGG 0.506004 5_2:-8814691 None:intergenic
TGTCGGAATCTTCGCCGAAA+AGG 0.506016 5_2:-8811106 None:intergenic
TTGGCAATTAGATGTTATCT+GGG 0.506474 5_2:+8815293 Msa0755050:intron
AACGGAGCTAGTAGCGGCGG+TGG 0.507140 5_2:+8811254 Msa0755050:CDS
AGAAGAAGATGAAGCGGCGG+AGG 0.507252 5_2:-8811171 None:intergenic
AAGAAGACGAAGAAGAAGAG+TGG 0.510048 5_2:-8811145 None:intergenic
CAGCATAATGATAGAGGAGC+TGG 0.510421 5_2:+8812507 Msa0755050:CDS
TACACAGAGAATGAAAATGA+AGG 0.512451 5_2:+8816065 Msa0755050:CDS
ACAATTCAATATAGGAAGCA+AGG 0.513666 5_2:+8816672 Msa0755050:three_prime_UTR
TGCTATAGTCGTGCAGAAGG+CGG 0.514503 5_2:+8813898 Msa0755050:CDS
TGAAGAAACTCTGTCAAGAA+AGG 0.514756 5_2:+8812644 Msa0755050:CDS
TGGAGAGAGTGTTGGAGCGA+GGG 0.515263 5_2:-8810335 None:intergenic
GGACGTGGTCGTTGGCAACA+AGG 0.516272 5_2:+8812483 Msa0755050:CDS
CTCCCATTTCCCAAGGCTCA+TGG 0.517450 5_2:-8814684 None:intergenic
CAAGGGCAGCATAATGATAG+AGG 0.517610 5_2:+8812501 Msa0755050:CDS
GTGCCTGGCGTTTGCGAATG+AGG 0.518093 5_2:+8816356 Msa0755050:CDS
AATACGAACAACCCGGGAAG+AGG 0.518689 5_2:+8812453 Msa0755050:CDS
TACCGACGCGTGTCTGACAT+TGG 0.520092 5_2:+8810716 Msa0755050:five_prime_UTR
AGCGGTAGTTAACTACCGCC+AGG 0.521241 5_2:+8810895 Msa0755050:five_prime_UTR
TGCCTCTGAGGATAAGGTCC+AGG 0.524197 5_2:-8812543 None:intergenic
TCCTCTTCCGATACTGGAAA+CGG 0.524624 5_2:+8811236 Msa0755050:CDS
ATCATCTGATCGAAGGTGCT+GGG 0.525350 5_2:-8816713 None:intergenic
TACAGAGAAAGAGGAGGCGT+TGG 0.525464 5_2:+8810156 Msa0755050:five_prime_UTR
TATCTTGATGGGTGCTGAGA+TGG 0.529076 5_2:+8815436 Msa0755050:CDS
CGGAGGTTGCATCCGTTGAT+CGG 0.530815 5_2:+8810187 Msa0755050:five_prime_UTR
CAGATTCAGTCATTCCTGGC+AGG 0.531148 5_2:+8815795 Msa0755050:intron
TGCTGTGATACGACTACTGA+TGG 0.531330 5_2:+8815461 Msa0755050:CDS
GATTCCGACAACGATAAAGA+TGG 0.538494 5_2:+8811119 Msa0755050:exon
CGGTTGTTAACAACCGCTGC+CGG 0.539888 5_2:+8810862 Msa0755050:five_prime_UTR
CGGCATTATTGGTTGAGCTA+AGG 0.540874 5_2:-8810551 None:intergenic
GAAAATGAAGGGCTACTGGC+AGG 0.542377 5_2:+8816077 Msa0755050:CDS
GGGAAATGGGAGTACACAAA+AGG 0.545125 5_2:+8814695 Msa0755050:CDS
CATAATGATAGAGATCTGTT+TGG 0.545471 5_2:+8811339 Msa0755050:CDS
ATACGAACAACCCGGGAAGA+GGG 0.552800 5_2:+8812454 Msa0755050:CDS
ATACCTCATTCGCAAACGCC+AGG 0.554837 5_2:-8816359 None:intergenic
GGGGCTCACCGTATCTTGAT+GGG 0.555557 5_2:+8815425 Msa0755050:CDS
AGAAGTTCCAAACGGTTGAA+AGG 0.557237 5_2:-8816560 None:intergenic
TTGCGAATGAGGTATTATGC+TGG 0.559796 5_2:+8816367 Msa0755050:CDS
CTGTCATACAGGGATGATGC+AGG 0.560137 5_2:+8816003 Msa0755050:intron
AAAACAGACTTAGGCTCAGA+AGG 0.561278 5_2:+8814280 Msa0755050:intron
CAATTCAATATAGGAAGCAA+GGG 0.563974 5_2:+8816673 Msa0755050:three_prime_UTR
GCTGGGAAACACGCCGGCAG+CGG 0.564827 5_2:-8810875 None:intergenic
ATTGGAGCTGATTTGAACGA+TGG 0.565104 5_2:+8814095 Msa0755050:CDS
ACGAACAACCCGGGAAGAGG+GGG 0.566118 5_2:+8812456 Msa0755050:CDS
ACACAGAGAATGAAAATGAA+GGG 0.567895 5_2:+8816066 Msa0755050:CDS
TAATTACCAGGAATAGGGTA+AGG 0.568716 5_2:-8811402 None:intergenic
GGAAATGACCATATTGCCCC+TGG 0.569745 5_2:-8810913 None:intergenic
TCCGTTTCCAGTATCGGAAG+AGG 0.570923 5_2:-8811237 None:intergenic
TGCTCTTCTGGGATCTTCAG+TGG 0.571759 5_2:-8815336 None:intergenic
CACAAAGTGATTTAGATCGC+AGG 0.574140 5_2:+8814761 Msa0755050:CDS
TGAGGATAAGGTCCAGGACG+CGG 0.577599 5_2:-8812537 None:intergenic
CTATAGTCGTGCAGAAGGCG+GGG 0.578781 5_2:+8813900 Msa0755050:CDS
AGAAGACGAAGAAGAAGAGT+GGG 0.579385 5_2:-8811144 None:intergenic
GACGTGGTCGTTGGCAACAA+GGG 0.579752 5_2:+8812484 Msa0755050:CDS
TTGGAGAGAGTGTTGGAGCG+AGG 0.579784 5_2:-8810336 None:intergenic
GAAGATCCCAGAAGAGCAGA+CGG 0.581979 5_2:+8815341 Msa0755050:CDS
CTGGATACAATTGTCAGTGT+CGG 0.584822 5_2:+8810692 Msa0755050:five_prime_UTR
CTATAGCAGGCAAGTTCACA+AGG 0.584854 5_2:-8813883 None:intergenic
TACGAACAACCCGGGAAGAG+GGG 0.585770 5_2:+8812455 Msa0755050:CDS
CACAGAACAAAATTCAACAT+TGG 0.586435 5_2:-8815387 None:intergenic
GCCTGCTATAGTCGTGCAGA+AGG 0.591701 5_2:+8813895 Msa0755050:CDS
TAAGGCCTACAACTACCTAC+TGG 0.595611 5_2:-8810533 None:intergenic
TCCACTTCCAGGACAATCAA+CGG 0.597766 5_2:+8810258 Msa0755050:five_prime_UTR
ACTGACAATTGTATCCAGAC+TGG 0.598371 5_2:-8810687 None:intergenic
TGAAGAAGAAGAAGATGAAG+CGG 0.600459 5_2:-8811177 None:intergenic
ATTCCGACAACGATAAAGAT+GGG 0.600746 5_2:+8811120 Msa0755050:exon
GAGCTTGCAGAAGTTCCAAA+CGG 0.601546 5_2:-8816568 None:intergenic
TACCCAAAATTCTGCCTCTG+AGG 0.603135 5_2:-8812555 None:intergenic
GGCGGTAGTTAACTACCGCT+GGG 0.604336 5_2:-8810892 None:intergenic
TCTCAGCACCCATCAAGATA+CGG 0.605709 5_2:-8815433 None:intergenic
TTGGCATCAACATCATGTAT+CGG 0.605933 5_2:-8815368 None:intergenic
CCGTAATAATACGAACAACC+CGG 0.607451 5_2:+8812446 Msa0755050:CDS
AGATGTAATAACAAGTCACC+TGG 0.607473 5_2:+8816601 Msa0755050:CDS
ACCTTTGGAGGAAGAAGCTG+CGG 0.609864 5_2:-8811204 None:intergenic
TTCGTATTATTACGGATGGG+AGG 0.610071 5_2:-8812438 None:intergenic
TTGTTCGTATTATTACGGAT+GGG 0.612923 5_2:-8812441 None:intergenic
GCGGTAGTTAACTACCGCCA+GGG 0.612961 5_2:+8810896 Msa0755050:five_prime_UTR
AAACCAGTTACAGACTGCAC+TGG 0.616430 5_2:+8810817 Msa0755050:five_prime_UTR
AAAGTTCATCATCTGATCGA+AGG 0.616481 5_2:-8816720 None:intergenic
GGTTAAAAGAGATGAAGAAG+AGG 0.617064 5_2:-8810295 None:intergenic
TTACCTTGTTCAGATTGTTG+CGG 0.618634 5_2:-8814483 None:intergenic
TATGGTAATAGGTTTCAGAA+TGG 0.620990 5_2:+8812576 Msa0755050:CDS
CTGTGATTAAGACAAAATTG+GGG 0.629784 5_2:+8815405 Msa0755050:CDS
AGTTCCAAACGGTTGAAAGG+TGG 0.634627 5_2:-8816557 None:intergenic
GCATTTCAGTCCGAACAAGA+CGG 0.638960 5_2:-8816026 None:intergenic
ATGGGAGTACACAAAAGGAA+TGG 0.640999 5_2:+8814700 Msa0755050:CDS
TCAGATCGAAAACTCACCAT+CGG 0.642537 5_2:-8810367 None:intergenic
AGAAGAAGAAGATGAAGCGG+CGG 0.645770 5_2:-8811174 None:intergenic
TAATGTCGACCTATGAAGCA+CGG 0.654678 5_2:-8810760 None:intergenic
CGTAATAATACGAACAACCC+GGG 0.655412 5_2:+8812447 Msa0755050:CDS
AGACAAAACGTTCATCGCGG+TGG 0.657013 5_2:-8812599 None:intergenic
GTTTGGAGGTAAGGAAGGAG+AGG 0.658872 5_2:+8816922 Msa0755050:three_prime_UTR
CGGTAGTTAACTACCGCCAG+GGG 0.665963 5_2:+8810897 Msa0755050:five_prime_UTR
TCATGCTAATAACTACCAGT+AGG 0.667363 5_2:+8810518 Msa0755050:five_prime_UTR
GAATACTTCCAATTGACACA+TGG 0.667588 5_2:-8810934 None:intergenic
CTGTATGTAACTGGTGTGAG+CGG 0.671173 5_2:+8810842 Msa0755050:five_prime_UTR
TCCCAATGTCAGACACGCGT+CGG 0.673789 5_2:-8810718 None:intergenic
GTCCTGGACCTTATCCTCAG+AGG 0.674041 5_2:+8812541 Msa0755050:CDS
TGTGATTAAGACAAAATTGG+GGG 0.674231 5_2:+8815406 Msa0755050:CDS
ATACCAATTAAGTATTCACA+TGG 0.681226 5_2:+8810589 Msa0755050:five_prime_UTR
AGGCGTTGGATCCAAAGCGG+AGG 0.681284 5_2:+8810170 Msa0755050:five_prime_UTR
ACTACCGCTGGGAAACACGC+CGG 0.683116 5_2:-8810881 None:intergenic
TTGATTGTCCTGGAAGTGGA+CGG 0.684995 5_2:-8810255 None:intergenic
ACTGGAAACGGAGCTAGTAG+CGG 0.695135 5_2:+8811248 Msa0755050:CDS
AAAGTGATTTAGATCGCAGG+AGG 0.695618 5_2:+8814764 Msa0755050:CDS
AGTATCGGAAGAGGAATCTG+CGG 0.697580 5_2:-8811228 None:intergenic
TGTCCTGGAAGTGGACGGTG+AGG 0.699786 5_2:-8810250 None:intergenic
GTACCGCAACAATCTGAACA+AGG 0.701773 5_2:+8814480 Msa0755050:CDS
GGAAACGGAGCTAGTAGCGG+CGG 0.708644 5_2:+8811251 Msa0755050:CDS
GCAGTTGAATTATCGTAACG+AGG 0.713525 5_2:+8815632 Msa0755050:intron
AGGAGGCGTTGGATCCAAAG+CGG 0.723390 5_2:+8810167 Msa0755050:five_prime_UTR
AATGACCATATTGCCCCTGG+CGG 0.724884 5_2:-8810910 None:intergenic
GCTGCCGGCGTGTTTCCCAG+CGG 0.730035 5_2:+8810877 Msa0755050:five_prime_UTR
GGAGTTAAAGACAAGTTACG+AGG 0.731121 5_2:+8815499 Msa0755050:CDS
CAGAGACAAAACGTTCATCG+CGG 0.738071 5_2:-8812602 None:intergenic
ATAATGCCGATATTGTTAGG+CGG 0.739910 5_2:+8810565 Msa0755050:five_prime_UTR
ATTATGTACAGAGAAAGAGG+AGG 0.785780 5_2:+8810150 Msa0755050:five_prime_UTR
ACTTCCAGGACAATCAACGG+TGG 0.791516 5_2:+8810261 Msa0755050:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTTTTTTTATTTTTTTGA+TGG - chr5_2:8810029-8810048 None:intergenic 10.0%
!!! ATTTTTAAATGATAAACTAA+CGG + chr5_2:8811825-8811844 Msa0755050:intron 10.0%
!! ATCATCATTTAAAAAATTAA+TGG - chr5_2:8812217-8812236 None:intergenic 10.0%
!!! ATAAATAAAATACCTTTTTT+GGG - chr5_2:8814137-8814156 None:intergenic 10.0%
!! AATTTACTTGAAAAAAATTA+TGG - chr5_2:8815055-8815074 None:intergenic 10.0%
!!! ATAATTTTTTTCAAGTAAAT+TGG + chr5_2:8815054-8815073 Msa0755050:intron 10.0%
!! TTGAATTGTTTAAAAATTAA+GGG - chr5_2:8816661-8816680 None:intergenic 10.0%
!! ATTGAATTGTTTAAAAATTA+AGG - chr5_2:8816662-8816681 None:intergenic 10.0%
!!! ATTTTTAAACAATTCAATAT+AGG + chr5_2:8816664-8816683 Msa0755050:three_prime_UTR 10.0%
!!! ATTTTTTTTATTTTTGTAGG+TGG + chr5_2:8809955-8809974 Msa0755050:five_prime_UTR 15.0%
!! AGTAATTGAATAAAAATGAA+AGG - chr5_2:8810414-8810433 None:intergenic 15.0%
!! ATTAATAGTAATTTGAAAAC+AGG + chr5_2:8810779-8810798 Msa0755050:five_prime_UTR 15.0%
!! TTAAAAGAAAAAACAAACAA+AGG + chr5_2:8811002-8811021 Msa0755050:five_prime_UTR 15.0%
!! AATAATAATGAACAAAGATT+AGG - chr5_2:8811432-8811451 None:intergenic 15.0%
!!! TGTAGTTTTAGTAAATAAAT+AGG + chr5_2:8811522-8811541 Msa0755050:intron 15.0%
!! ATATAATAAAAAACTTAGCA+TGG + chr5_2:8812173-8812192 Msa0755050:intron 15.0%
!! TTTAAATGATGATAAATCAA+CGG + chr5_2:8812224-8812243 Msa0755050:intron 15.0%
!!! GATAAATAAAATACCTTTTT+TGG - chr5_2:8814138-8814157 None:intergenic 15.0%
!! GAAAAAAAAAGTTTAGAAAA+TGG - chr5_2:8816858-8816877 None:intergenic 15.0%
!! AGATACTAACATTATATCAA+TGG - chr5_2:8811467-8811486 None:intergenic 20.0%
!! TAAATAAATAGGTTGTGTTA+GGG + chr5_2:8811533-8811552 Msa0755050:intron 20.0%
!! TTATAATAAAAAAATCGTGC+TGG + chr5_2:8811758-8811777 Msa0755050:intron 20.0%
!!! AAAAAATCTATAAGCTTGTT+AGG + chr5_2:8811943-8811962 Msa0755050:intron 20.0%
!!! TTTTATCTACAAGGTAATTT+AGG + chr5_2:8812066-8812085 Msa0755050:intron 20.0%
!!! AATTTTGTTTTATAATCCCA+CGG - chr5_2:8812141-8812160 None:intergenic 20.0%
!!! TTTCTTGATTCGTTTTTTTA+TGG + chr5_2:8812387-8812406 Msa0755050:intron 20.0%
!!! TTTGACTAGAGTATTAATTA+CGG + chr5_2:8812940-8812959 Msa0755050:intron 20.0%
!!! TTTGACTTGGATATTAATTA+GGG + chr5_2:8813233-8813252 Msa0755050:intron 20.0%
!!! TCTATAGTTTTAATATTTCG+TGG + chr5_2:8813594-8813613 Msa0755050:intron 20.0%
!!! CATGATTATTTTATGACATT+TGG + chr5_2:8813748-8813767 Msa0755050:intron 20.0%
!! ATGTCTTAAAATAATCATGA+AGG - chr5_2:8813796-8813815 None:intergenic 20.0%
!! TAAAAAGTCTCTAAATAAAC+AGG - chr5_2:8814055-8814074 None:intergenic 20.0%
!! TTTATCTATAAATAAACTGC+TGG + chr5_2:8814152-8814171 Msa0755050:intron 20.0%
!! TTATCTATAAATAAACTGCT+GGG + chr5_2:8814153-8814172 Msa0755050:intron 20.0%
!!! AAAAAATGAATGCTTTTATC+TGG - chr5_2:8814382-8814401 None:intergenic 20.0%
!! ATCAGAAATTAAATTACCAA+TGG - chr5_2:8814424-8814443 None:intergenic 20.0%
!!! ATTGGTAATTTAATTTCTGA+TGG + chr5_2:8814423-8814442 Msa0755050:intron 20.0%
!!! TAAAAGAAATTTTAGCACAT+GGG - chr5_2:8814636-8814655 None:intergenic 20.0%
!!! TCTTTCTTTTTTATTAGACT+TGG + chr5_2:8814802-8814821 Msa0755050:intron 20.0%
!!! TTTTTTTCAAGTAAATTGGT+TGG + chr5_2:8815058-8815077 Msa0755050:intron 20.0%
!! CTAAATCCAATACAAATATA+TGG - chr5_2:8815825-8815844 None:intergenic 20.0%
!! CATATATTTGTATTGGATTT+AGG + chr5_2:8815823-8815842 Msa0755050:CDS 20.0%
!!! TAATATGCTTTAACTAGTTT+TGG + chr5_2:8815890-8815909 Msa0755050:intron 20.0%
!! AATCATCAATTAGCTAATTA+AGG + chr5_2:8816224-8816243 Msa0755050:intron 20.0%
!! TAATTGAATATCATCTTTAG+AGG + chr5_2:8816248-8816267 Msa0755050:intron 20.0%
!! GAAAACTATATAATCTGAAA+TGG + chr5_2:8816289-8816308 Msa0755050:intron 20.0%
!!! TCATTATCAACATAATTTGT+TGG + chr5_2:8816322-8816341 Msa0755050:intron 20.0%
!!! ATAACAAACTCTATTTTGAT+TGG - chr5_2:8816456-8816475 None:intergenic 20.0%
!!! AGAAATATGCAGTAATTTTA+TGG + chr5_2:8816794-8816813 Msa0755050:three_prime_UTR 20.0%
!! TTTTAACCGTTAAAGATCAT+AGG + chr5_2:8810310-8810329 Msa0755050:five_prime_UTR 25.0%
! TTTAACCGTTAAAGATCATA+GGG + chr5_2:8810311-8810330 Msa0755050:five_prime_UTR 25.0%
! ATACCAATTAAGTATTCACA+TGG + chr5_2:8810589-8810608 Msa0755050:five_prime_UTR 25.0%
! GTAAATAAATAGGTTGTGTT+AGG + chr5_2:8811532-8811551 Msa0755050:intron 25.0%
! ATCTTCCTATAGTAAAACTT+AGG - chr5_2:8811614-8811633 None:intergenic 25.0%
!! GATAAAATGAAGTACCATTA+TGG - chr5_2:8812053-8812072 None:intergenic 25.0%
! GGGATTATAAAACAAAATTG+CGG + chr5_2:8812142-8812161 Msa0755050:intron 25.0%
! GGATTATAAAACAAAATTGC+GGG + chr5_2:8812143-8812162 Msa0755050:intron 25.0%
! AAGAATTCGACAAATTGTTA+TGG + chr5_2:8812808-8812827 Msa0755050:intron 25.0%
! TTTCTTCATTATGTTGAAAC+TGG + chr5_2:8812862-8812881 Msa0755050:intron 25.0%
! TACTTAAAAACACAAAGAAG+TGG - chr5_2:8813040-8813059 None:intergenic 25.0%
! GGGAAAGACTAAAATTATTA+GGG - chr5_2:8813145-8813164 None:intergenic 25.0%
! AGGGAAAGACTAAAATTATT+AGG - chr5_2:8813146-8813165 None:intergenic 25.0%
!!! TCATATGATTTTGTTTGACT+TGG + chr5_2:8813220-8813239 Msa0755050:intron 25.0%
!!! GTTTGACTTGGATATTAATT+AGG + chr5_2:8813232-8813251 Msa0755050:intron 25.0%
! TTCATATTGAGTTTGAATGT+TGG + chr5_2:8813499-8813518 Msa0755050:intron 25.0%
!!! GTTTTAATATTTCGTGGTTT+TGG + chr5_2:8813600-8813619 Msa0755050:intron 25.0%
!!! TATGACATTTGGTGTTATTA+TGG + chr5_2:8813759-8813778 Msa0755050:intron 25.0%
! ATAATCATGAAGGATGAAAA+AGG - chr5_2:8813786-8813805 None:intergenic 25.0%
! ATAATCAGAACATATACATC+TGG - chr5_2:8813841-8813860 None:intergenic 25.0%
! CTCTTAATATTATAAGCCAT+TGG + chr5_2:8814405-8814424 Msa0755050:intron 25.0%
!!! GTAAAAGAAATTTTAGCACA+TGG - chr5_2:8814637-8814656 None:intergenic 25.0%
! AAATACTTTCTTTGAGCAAT+AGG - chr5_2:8814943-8814962 None:intergenic 25.0%
!!! TATTGCTCAAAGAAAGTATT+TGG + chr5_2:8814942-8814961 Msa0755050:intron 25.0%
! ACTTGAAAAAAATTATGGCT+CGG - chr5_2:8815050-8815069 None:intergenic 25.0%
! AGGATACTAATGCAATAAAA+AGG + chr5_2:8815099-8815118 Msa0755050:intron 25.0%
! TTAACTGTTGGACAAATTAA+TGG + chr5_2:8815206-8815225 Msa0755050:intron 25.0%
! AAAAAGTGAAACCATAAAGT+GGG - chr5_2:8815239-8815258 None:intergenic 25.0%
! TAAAAAGTGAAACCATAAAG+TGG - chr5_2:8815240-8815259 None:intergenic 25.0%
!!! ATGGTTTCACTTTTTATGAT+TGG + chr5_2:8815244-8815263 Msa0755050:intron 25.0%
!!! TTTCACTTTTTATGATTGGT+TGG + chr5_2:8815248-8815267 Msa0755050:intron 25.0%
!! AGTCTTAAAGTATTTGTCTT+TGG + chr5_2:8815274-8815293 Msa0755050:intron 25.0%
! TTCTGTGATTAAGACAAAAT+TGG + chr5_2:8815403-8815422 Msa0755050:CDS 25.0%
! TCTGTGATTAAGACAAAATT+GGG + chr5_2:8815404-8815423 Msa0755050:CDS 25.0%
! TTCAAAAGGAAAACTAAATC+TGG - chr5_2:8815566-8815585 None:intergenic 25.0%
! CCAACATAAAACTATTCAAA+AGG - chr5_2:8815580-8815599 None:intergenic 25.0%
!!! CCTTTTGAATAGTTTTATGT+TGG + chr5_2:8815577-8815596 Msa0755050:intron 25.0%
!! AAGTACGAATTTTCATTGTA+AGG - chr5_2:8815947-8815966 None:intergenic 25.0%
! TTCAAATTAACAGTGGAAAT+AGG - chr5_2:8816151-8816170 None:intergenic 25.0%
!!! ACACCATCTGTTTTTTTTTT+TGG + chr5_2:8816426-8816445 Msa0755050:intron 25.0%
! AAGCCAAAAAAAAAAACAGA+TGG - chr5_2:8816432-8816451 None:intergenic 25.0%
! CAATAAACAAACATTAACAG+AGG - chr5_2:8816504-8816523 None:intergenic 25.0%
! CTCTGTTAATGTTTGTTTAT+TGG + chr5_2:8816502-8816521 Msa0755050:intron 25.0%
!! TACATCTAGTGCTTTTGTTT+CGG - chr5_2:8809916-8809935 None:intergenic 30.0%
!!! GATTTTGGTTGAAGAAGTTA+GGG - chr5_2:8810057-8810076 None:intergenic 30.0%
!!! TGATTTTGGTTGAAGAAGTT+AGG - chr5_2:8810058-8810077 None:intergenic 30.0%
! AACGATGATGAAGATGATTT+TGG - chr5_2:8810072-8810091 None:intergenic 30.0%
CAAAAGAGAAGAAGAGAATA+AGG + chr5_2:8810111-8810130 Msa0755050:five_prime_UTR 30.0%
TGTCCATGTGAATACTTAAT+TGG - chr5_2:8810595-8810614 None:intergenic 30.0%
CATAAGAGACCGTAAAAAAA+TGG + chr5_2:8811067-8811086 Msa0755050:five_prime_UTR 30.0%
!!! CCGTGAAATCCATTTTTTTA+CGG - chr5_2:8811079-8811098 None:intergenic 30.0%
! CCGTAAAAAAATGGATTTCA+CGG + chr5_2:8811076-8811095 Msa0755050:five_prime_UTR 30.0%
! CGTAAAAAAATGGATTTCAC+GGG + chr5_2:8811077-8811096 Msa0755050:five_prime_UTR 30.0%
! GTAAAAAAATGGATTTCACG+GGG + chr5_2:8811078-8811097 Msa0755050:five_prime_UTR 30.0%
CATAATGATAGAGATCTGTT+TGG + chr5_2:8811339-8811358 Msa0755050:CDS 30.0%
GAGAATAATTACCAGGAATA+GGG - chr5_2:8811410-8811429 None:intergenic 30.0%
AGATTAGGAGAATAATTACC+AGG - chr5_2:8811417-8811436 None:intergenic 30.0%
! TAGGTCCTAAGTTTTACTAT+AGG + chr5_2:8811606-8811625 Msa0755050:intron 30.0%
!!! CAACATGTATTTTAGAGTCA+AGG + chr5_2:8811665-8811684 Msa0755050:intron 30.0%
AATTGAAGACCTAACAGTAA+AGG + chr5_2:8811689-8811708 Msa0755050:intron 30.0%
ACTAGTAATCCTTTACTGTT+AGG - chr5_2:8811701-8811720 None:intergenic 30.0%
GATTACTAGTGTTTCCTTTA+TGG + chr5_2:8811711-8811730 Msa0755050:intron 30.0%
TAATAAAAAAATCGTGCTGG+CGG + chr5_2:8811761-8811780 Msa0755050:intron 30.0%
GTTGTAATGAAAAATTAGCG+TGG + chr5_2:8811783-8811802 Msa0755050:intron 30.0%
!! ACAAGTGTGCTCATTTTAAT+CGG + chr5_2:8811858-8811877 Msa0755050:intron 30.0%
! CCACTGTAATACATTTTGTT+TGG - chr5_2:8812016-8812035 None:intergenic 30.0%
CCAAACAAAATGTATTACAG+TGG + chr5_2:8812013-8812032 Msa0755050:intron 30.0%
TTGAATATCTTGTGCCATAA+TGG + chr5_2:8812036-8812055 Msa0755050:intron 30.0%
! GGTACTTCATTTTATCTACA+AGG + chr5_2:8812057-8812076 Msa0755050:intron 30.0%
! AAGGTAATTTAGGACCTTAT+AGG + chr5_2:8812076-8812095 Msa0755050:intron 30.0%
ACTGGTAATTGTTTCCTATA+AGG - chr5_2:8812093-8812112 None:intergenic 30.0%
AATTACCAGTGTTTCCTTTA+CGG + chr5_2:8812103-8812122 Msa0755050:intron 30.0%
TTATAAAACAAAATTGCGGG+AGG + chr5_2:8812146-8812165 Msa0755050:intron 30.0%
TATAAAACAAAATTGCGGGA+GGG + chr5_2:8812147-8812166 Msa0755050:intron 30.0%
TTGATCGGTTATTACAACTT+TGG + chr5_2:8812272-8812291 Msa0755050:intron 30.0%
TTGTTCGTATTATTACGGAT+GGG - chr5_2:8812444-8812463 None:intergenic 30.0%
!! AGAATTTTGGGTATGGTAAT+AGG + chr5_2:8812565-8812584 Msa0755050:CDS 30.0%
TATGGTAATAGGTTTCAGAA+TGG + chr5_2:8812576-8812595 Msa0755050:CDS 30.0%
!! AAAGGTTATTGCTTTTCAAG+AGG + chr5_2:8812662-8812681 Msa0755050:CDS 30.0%
!! TTATTGCTTTTCAAGAGGTA+TGG + chr5_2:8812667-8812686 Msa0755050:intron 30.0%
!! TATTGCTTTTCAAGAGGTAT+GGG + chr5_2:8812668-8812687 Msa0755050:intron 30.0%
GATGGAAAGGCTAAAATATT+AGG - chr5_2:8813436-8813455 None:intergenic 30.0%
! GAGCTTTTATTATATGTGCA+TGG + chr5_2:8813570-8813589 Msa0755050:intron 30.0%
! TATACTGCTTTAGCGTTTTA+GGG + chr5_2:8813663-8813682 Msa0755050:intron 30.0%
GATACATACATTCCCAAAAA+AGG + chr5_2:8814122-8814141 Msa0755050:CDS 30.0%
!! TTTTAGGTATTAGCAGCAAA+AGG - chr5_2:8814264-8814283 None:intergenic 30.0%
CTAATACCTAAAACAGACTT+AGG + chr5_2:8814271-8814290 Msa0755050:intron 30.0%
!!! CAAAATGGATGTTTTGAAGA+TGG - chr5_2:8814345-8814364 None:intergenic 30.0%
! TCTTCAAAACATCCATTTTG+TGG + chr5_2:8814345-8814364 Msa0755050:CDS 30.0%
! TTTGAAATGTGTTTGCTCTT+AGG + chr5_2:8814516-8814535 Msa0755050:intron 30.0%
ACAGCTGAATTAAACTGAAA+TGG - chr5_2:8814601-8814620 None:intergenic 30.0%
! TGCCATTTACATGATTTACA+TGG - chr5_2:8814828-8814847 None:intergenic 30.0%
GTAAATCATGTAAATGGCAA+TGG + chr5_2:8814829-8814848 Msa0755050:intron 30.0%
TCATGAATCAGGATACAATA+TGG + chr5_2:8814853-8814872 Msa0755050:intron 30.0%
CATGAATCAGGATACAATAT+GGG + chr5_2:8814854-8814873 Msa0755050:intron 30.0%
AATGTAACCAATACAACAAC+AGG + chr5_2:8814899-8814918 Msa0755050:intron 30.0%
AAATTGGTTGGAGAAGATAT+TGG + chr5_2:8815070-8815089 Msa0755050:intron 30.0%
! AGGATGTGTGATTTTGTAAA+TGG + chr5_2:8815119-8815138 Msa0755050:intron 30.0%
! ATGTGTGATTTTGTAAATGG+AGG + chr5_2:8815122-8815141 Msa0755050:intron 30.0%
! TAATTTGTCCAACAGTTAAG+TGG - chr5_2:8815205-8815224 None:intergenic 30.0%
! ATGGAATTTTTCCCACTTTA+TGG + chr5_2:8815225-8815244 Msa0755050:intron 30.0%
TTTGGCAATTAGATGTTATC+TGG + chr5_2:8815292-8815311 Msa0755050:intron 30.0%
TTGGCAATTAGATGTTATCT+GGG + chr5_2:8815293-8815312 Msa0755050:intron 30.0%
CACAGAACAAAATTCAACAT+TGG - chr5_2:8815390-8815409 None:intergenic 30.0%
CTGTGATTAAGACAAAATTG+GGG + chr5_2:8815405-8815424 Msa0755050:CDS 30.0%
TGTGATTAAGACAAAATTGG+GGG + chr5_2:8815406-8815425 Msa0755050:CDS 30.0%
! TGATGGAAAGAGATTTTATG+TGG + chr5_2:8815478-8815497 Msa0755050:CDS 30.0%
! ACAGAAACTGCTAAAGTTTT+GGG + chr5_2:8815668-8815687 Msa0755050:CDS 30.0%
ACAATGAAAATTCGTACTTC+TGG + chr5_2:8815948-8815967 Msa0755050:intron 30.0%
CATTCTCTGTGTAATATCTT+TGG - chr5_2:8816058-8816077 None:intergenic 30.0%
TACACAGAGAATGAAAATGA+AGG + chr5_2:8816065-8816084 Msa0755050:CDS 30.0%
ACACAGAGAATGAAAATGAA+GGG + chr5_2:8816066-8816085 Msa0755050:CDS 30.0%
! TTTAACTTCTGTGAAGTGTA+TGG + chr5_2:8816105-8816124 Msa0755050:intron 30.0%
CTGCAATTTCAAATTAACAG+TGG - chr5_2:8816158-8816177 None:intergenic 30.0%
!! TATCAACATAATTTGTTGGC+AGG + chr5_2:8816326-8816345 Msa0755050:intron 30.0%
!! ATCAACATAATTTGTTGGCA+GGG + chr5_2:8816327-8816346 Msa0755050:intron 30.0%
AAAATTAAGGGCAACTGTTA+AGG - chr5_2:8816649-8816668 None:intergenic 30.0%
ACAATTCAATATAGGAAGCA+AGG + chr5_2:8816672-8816691 Msa0755050:three_prime_UTR 30.0%
CAATTCAATATAGGAAGCAA+GGG + chr5_2:8816673-8816692 Msa0755050:three_prime_UTR 30.0%
!! ACATCTAGTGCTTTTGTTTC+GGG - chr5_2:8809915-8809934 None:intergenic 35.0%
GTGATTATGTACAGAGAAAG+AGG + chr5_2:8810147-8810166 Msa0755050:five_prime_UTR 35.0%
ATTATGTACAGAGAAAGAGG+AGG + chr5_2:8810150-8810169 Msa0755050:five_prime_UTR 35.0%
GGTTAAAAGAGATGAAGAAG+AGG - chr5_2:8810298-8810317 None:intergenic 35.0%
TCATGCTAATAACTACCAGT+AGG + chr5_2:8810518-8810537 Msa0755050:five_prime_UTR 35.0%
CCTAACAATATCGGCATTAT+TGG - chr5_2:8810565-8810584 None:intergenic 35.0%
CCAATAATGCCGATATTGTT+AGG + chr5_2:8810562-8810581 Msa0755050:five_prime_UTR 35.0%
ATAATGCCGATATTGTTAGG+CGG + chr5_2:8810565-8810584 Msa0755050:five_prime_UTR 35.0%
GAATACTTCCAATTGACACA+TGG - chr5_2:8810937-8810956 None:intergenic 35.0%
ATTCCGACAACGATAAAGAT+GGG + chr5_2:8811120-8811139 Msa0755050:exon 35.0%
TGAAGAAGAAGAAGATGAAG+CGG - chr5_2:8811180-8811199 None:intergenic 35.0%
! GAAGAAAATGGTGATGTTGT+TGG + chr5_2:8811287-8811306 Msa0755050:CDS 35.0%
TAATTACCAGGAATAGGGTA+AGG - chr5_2:8811405-8811424 None:intergenic 35.0%
GGAGAATAATTACCAGGAAT+AGG - chr5_2:8811411-8811430 None:intergenic 35.0%
! AAATAACCCATGAGCTTGTT+AGG + chr5_2:8811587-8811606 Msa0755050:intron 35.0%
GTGTTTCCTTTATGGTTAAC+TGG + chr5_2:8811719-8811738 Msa0755050:intron 35.0%
AGCTAACCAGTTAACCATAA+AGG - chr5_2:8811728-8811747 None:intergenic 35.0%
AATGATAAACTAACGGCTGA+AGG + chr5_2:8811832-8811851 Msa0755050:intron 35.0%
!! CAAGTGTGCTCATTTTAATC+GGG + chr5_2:8811859-8811878 Msa0755050:intron 35.0%
!! AAGCTTTGAGTATACGAAGA+TGG + chr5_2:8811970-8811989 Msa0755050:intron 35.0%
ATTAACCGTAAAGGAAACAC+TGG - chr5_2:8812111-8812130 None:intergenic 35.0%
GTGTTTCCTTTACGGTTAAT+TGG + chr5_2:8812111-8812130 Msa0755050:intron 35.0%
GGTTAACCAATTAACCGTAA+AGG - chr5_2:8812120-8812139 None:intergenic 35.0%
GTTGTTCGTATTATTACGGA+TGG - chr5_2:8812445-8812464 None:intergenic 35.0%
TGAAGAAACTCTGTCAAGAA+AGG + chr5_2:8812644-8812663 Msa0755050:CDS 35.0%
TTGCGTCATGCAATTTAAGT+AGG + chr5_2:8812720-8812739 Msa0755050:intron 35.0%
TGCGTCATGCAATTTAAGTA+GGG + chr5_2:8812721-8812740 Msa0755050:intron 35.0%
AGCCAAACAGTATACAATAG+TGG + chr5_2:8813074-8813093 Msa0755050:intron 35.0%
TGCCACTATTGTATACTGTT+TGG - chr5_2:8813079-8813098 None:intergenic 35.0%
TCAAAAGTCCAAACAACAGA+GGG - chr5_2:8813165-8813184 None:intergenic 35.0%
TACTCAAACACGCAAAGAAA+CGG - chr5_2:8813333-8813352 None:intergenic 35.0%
! GATGCTATTTGTCTACTGTT+TGG - chr5_2:8813369-8813388 None:intergenic 35.0%
!! ACACTATCGAGATTTTAGGA+TGG - chr5_2:8813413-8813432 None:intergenic 35.0%
! TAGGACACTATCGAGATTTT+AGG - chr5_2:8813417-8813436 None:intergenic 35.0%
CAAAAAGTTCAAACGACAGA+TGG - chr5_2:8813454-8813473 None:intergenic 35.0%
! CTATACTGCTTTAGCGTTTT+AGG + chr5_2:8813662-8813681 Msa0755050:intron 35.0%
CAGAACATATACATCTGGAA+GGG - chr5_2:8813836-8813855 None:intergenic 35.0%
TCAGAACATATACATCTGGA+AGG - chr5_2:8813837-8813856 None:intergenic 35.0%
!!! GTATTTTGATGATCGTAGCT+TGG + chr5_2:8813927-8813946 Msa0755050:CDS 35.0%
CTCCAATATCTTCAGTGATA+TGG - chr5_2:8814082-8814101 None:intergenic 35.0%
GTATTAGCAGCAAAAGGAAA+AGG - chr5_2:8814258-8814277 None:intergenic 35.0%
! CAAAACATCCATTTTGTGGT+AGG + chr5_2:8814349-8814368 Msa0755050:intron 35.0%
GTTGATTACCTACCACAAAA+TGG - chr5_2:8814360-8814379 None:intergenic 35.0%
TTACCTTGTTCAGATTGTTG+CGG - chr5_2:8814486-8814505 None:intergenic 35.0%
TGAGTTTAGTAGTGTAGTGA+TGG + chr5_2:8814575-8814594 Msa0755050:intron 35.0%
!! TTTTACGCAGATACTTGCTA+CGG + chr5_2:8814651-8814670 Msa0755050:intron 35.0%
AAATCACTTTGTGGTCTTTC+TGG - chr5_2:8814754-8814773 None:intergenic 35.0%
GGCCATGTAAATCATGTAAA+TGG + chr5_2:8814823-8814842 Msa0755050:intron 35.0%
TTTGGTATCAAGCTGATTGT+AGG + chr5_2:8814960-8814979 Msa0755050:intron 35.0%
TTGGTATCAAGCTGATTGTA+GGG + chr5_2:8814961-8814980 Msa0755050:intron 35.0%
ATAGTCTCTTTACCTAGTCA+TGG + chr5_2:8815001-8815020 Msa0755050:intron 35.0%
GGAGAAGATATTGGCAATAT+AGG + chr5_2:8815079-8815098 Msa0755050:intron 35.0%
TACTTCTTCCACTTAACTGT+TGG + chr5_2:8815194-8815213 Msa0755050:intron 35.0%
TTGGCATCAACATCATGTAT+CGG - chr5_2:8815371-8815390 None:intergenic 35.0%
! GACAGAAACTGCTAAAGTTT+TGG + chr5_2:8815667-8815686 Msa0755050:CDS 35.0%
! ACGAGCTTATGGTAATGAAA+AGG - chr5_2:8815728-8815747 None:intergenic 35.0%
TGCATGTCATGATTTCAACA+AGG + chr5_2:8815756-8815775 Msa0755050:intron 35.0%
GGCGTTCCATATATTTGTAT+TGG + chr5_2:8815816-8815835 Msa0755050:CDS 35.0%
TGGAAATAGGAAACCAATAC+AGG - chr5_2:8816138-8816157 None:intergenic 35.0%
AAAGTGAAATTGTTCGGTCT+CGG - chr5_2:8816479-8816498 None:intergenic 35.0%
GAGGCAAAAGTGAAATTGTT+CGG - chr5_2:8816485-8816504 None:intergenic 35.0%
!! AGGTGACTTGTTATTACATC+TGG - chr5_2:8816602-8816621 None:intergenic 35.0%
AGATGTAATAACAAGTCACC+TGG + chr5_2:8816601-8816620 Msa0755050:CDS 35.0%
AAAGTTCATCATCTGATCGA+AGG - chr5_2:8816723-8816742 None:intergenic 35.0%
! TCGATCAGATGATGAACTTT+TGG + chr5_2:8816723-8816742 Msa0755050:three_prime_UTR 35.0%
! CGATCAGATGATGAACTTTT+GGG + chr5_2:8816724-8816743 Msa0755050:three_prime_UTR 35.0%
CTGCATAAACGTGTTCATTA+AGG + chr5_2:8816887-8816906 Msa0755050:three_prime_UTR 35.0%
!! GTTGATTCGTTTCCGATCAA+CGG - chr5_2:8810202-8810221 None:intergenic 40.0%
CAATCAACGGTGGTAAAGAT+AGG + chr5_2:8810271-8810290 Msa0755050:five_prime_UTR 40.0%
AGGGTCCCTATGATCTTTAA+CGG - chr5_2:8810319-8810338 None:intergenic 40.0%
!! AGCATTTTTGGAGAGAGTGT+TGG - chr5_2:8810346-8810365 None:intergenic 40.0%
TCAGATCGAAAACTCACCAT+CGG - chr5_2:8810370-8810389 None:intergenic 40.0%
AACTACCAGTAGGTAGTTGT+AGG + chr5_2:8810528-8810547 Msa0755050:five_prime_UTR 40.0%
GGTATACCGCCTAACAATAT+CGG - chr5_2:8810574-8810593 None:intergenic 40.0%
GAAAATGACGTAATCCAGTC+TGG + chr5_2:8810673-8810692 Msa0755050:five_prime_UTR 40.0%
ACTGACAATTGTATCCAGAC+TGG - chr5_2:8810690-8810709 None:intergenic 40.0%
CTGGATACAATTGTCAGTGT+CGG + chr5_2:8810692-8810711 Msa0755050:five_prime_UTR 40.0%
TATGAAGCACGGACATTCAT+CGG - chr5_2:8810752-8810771 None:intergenic 40.0%
TAATGTCGACCTATGAAGCA+CGG - chr5_2:8810763-8810782 None:intergenic 40.0%
TGAAAACAGGACACATTTCC+TGG + chr5_2:8810792-8810811 Msa0755050:five_prime_UTR 40.0%
!!! AGTCTGTAACTGGTTTTTCC+AGG - chr5_2:8810813-8810832 None:intergenic 40.0%
GGTCATTTCCATGTGTCAAT+TGG + chr5_2:8810926-8810945 Msa0755050:five_prime_UTR 40.0%
! AAAAATGGATTTCACGGGGA+AGG + chr5_2:8811082-8811101 Msa0755050:five_prime_UTR 40.0%
GATTCCGACAACGATAAAGA+TGG + chr5_2:8811119-8811138 Msa0755050:exon 40.0%
AGAAGACGAAGAAGAAGAGT+GGG - chr5_2:8811147-8811166 None:intergenic 40.0%
AAGAAGACGAAGAAGAAGAG+TGG - chr5_2:8811148-8811167 None:intergenic 40.0%
! AGGGTAAGGACTTTTAGCAA+GGG - chr5_2:8811391-8811410 None:intergenic 40.0%
! TAGGGTAAGGACTTTTAGCA+AGG - chr5_2:8811392-8811411 None:intergenic 40.0%
AAAAGTCCTTACCCTATTCC+TGG + chr5_2:8811396-8811415 Msa0755050:CDS 40.0%
TTAGGACCTAACAAGCTCAT+GGG - chr5_2:8811596-8811615 None:intergenic 40.0%
! ATGGTTAACTGGTTAGCTGT+TGG + chr5_2:8811730-8811749 Msa0755050:intron 40.0%
! TTAACTGGTTAGCTGTTGGA+TGG + chr5_2:8811734-8811753 Msa0755050:intron 40.0%
! TAACTGGTTAGCTGTTGGAT+GGG + chr5_2:8811735-8811754 Msa0755050:intron 40.0%
TACGGTTAATTGGTTAACCG+TGG + chr5_2:8812121-8812140 Msa0755050:intron 40.0%
ACGGTTAATTGGTTAACCGT+GGG + chr5_2:8812122-8812141 Msa0755050:intron 40.0%
TCACTAATCGACAAACACCA+AGG - chr5_2:8812317-8812336 None:intergenic 40.0%
! TGGCAAGATGTGATTTTCTC+TGG + chr5_2:8812407-8812426 Msa0755050:intron 40.0%
TTCGTATTATTACGGATGGG+AGG - chr5_2:8812441-8812460 None:intergenic 40.0%
CCGGGTTGTTCGTATTATTA+CGG - chr5_2:8812449-8812468 None:intergenic 40.0%
CCGTAATAATACGAACAACC+CGG + chr5_2:8812446-8812465 Msa0755050:CDS 40.0%
CGTAATAATACGAACAACCC+GGG + chr5_2:8812447-8812466 Msa0755050:CDS 40.0%
! AAATTCTGCCTCTGAGGATA+AGG - chr5_2:8812552-8812571 None:intergenic 40.0%
! TATCCTCAGAGGCAGAATTT+TGG + chr5_2:8812552-8812571 Msa0755050:CDS 40.0%
! ATCCTCAGAGGCAGAATTTT+GGG + chr5_2:8812553-8812572 Msa0755050:CDS 40.0%
GCGTCATGCAATTTAAGTAG+GGG + chr5_2:8812722-8812741 Msa0755050:intron 40.0%
CGTCATGCAATTTAAGTAGG+GGG + chr5_2:8812723-8812742 Msa0755050:intron 40.0%
TCATTATGTTGAAACTGGCG+AGG + chr5_2:8812867-8812886 Msa0755050:intron 40.0%
AAACTGGCGAGGAAATCAAA+AGG + chr5_2:8812878-8812897 Msa0755050:intron 40.0%
TTGTAGTCAATAGCAGCCAT+AGG + chr5_2:8812965-8812984 Msa0755050:intron 40.0%
TAGTCTTTCCCTCTGTTGTT+TGG + chr5_2:8813154-8813173 Msa0755050:intron 40.0%
GTCAAAAGTCCAAACAACAG+AGG - chr5_2:8813166-8813185 None:intergenic 40.0%
TTGTAGTCAATAGCAGCCAT+AGG + chr5_2:8812965-8812984 Msa0755050:intron 40.0%
CAAAGAAACGGTGTTTCATG+TGG - chr5_2:8813321-8813340 None:intergenic 40.0%
TAGGATGGCTTCGTTTATTG+CGG - chr5_2:8813398-8813417 None:intergenic 40.0%
AGTTCAAACGACAGATGGAA+AGG - chr5_2:8813449-8813468 None:intergenic 40.0%
CAGTATAGCGAATAGTCGTA+TGG - chr5_2:8813650-8813669 None:intergenic 40.0%
TAGCTTGGTAAGCGCTATTT+GGG + chr5_2:8813942-8813961 Msa0755050:intron 40.0%
CGCCATATCACTGAAGATAT+TGG + chr5_2:8814077-8814096 Msa0755050:CDS 40.0%
!! ATTGGAGCTGATTTGAACGA+TGG + chr5_2:8814095-8814114 Msa0755050:CDS 40.0%
! TCTGAGCCTAAGTCTGTTTT+AGG - chr5_2:8814280-8814299 None:intergenic 40.0%
AAAACAGACTTAGGCTCAGA+AGG + chr5_2:8814280-8814299 Msa0755050:intron 40.0%
TTATATTCGCCATGAGCCTT+GGG + chr5_2:8814675-8814694 Msa0755050:CDS 40.0%
! ATGGGAGTACACAAAAGGAA+TGG + chr5_2:8814700-8814719 Msa0755050:CDS 40.0%
CTGCGATCTAAATCACTTTG+TGG - chr5_2:8814763-8814782 None:intergenic 40.0%
CACAAAGTGATTTAGATCGC+AGG + chr5_2:8814761-8814780 Msa0755050:CDS 40.0%
AAAGTGATTTAGATCGCAGG+AGG + chr5_2:8814764-8814783 Msa0755050:CDS 40.0%
ATGGCAATGGATCATGAATC+AGG + chr5_2:8814842-8814861 Msa0755050:intron 40.0%
ACAGCTACCTGTTGTTGTAT+TGG - chr5_2:8814909-8814928 None:intergenic 40.0%
TACAACAACAGGTAGCTGTT+AGG + chr5_2:8814910-8814929 Msa0755050:intron 40.0%
ACAACAACAGGTAGCTGTTA+GGG + chr5_2:8814911-8814930 Msa0755050:intron 40.0%
TCTCTTTACCTAGTCATGGT+TGG + chr5_2:8815005-8815024 Msa0755050:intron 40.0%
GGAGTTAAAGACAAGTTACG+AGG + chr5_2:8815499-8815518 Msa0755050:CDS 40.0%
GCAGTTGAATTATCGTAACG+AGG + chr5_2:8815632-8815651 Msa0755050:intron 40.0%
GCAAGTGAAAAACGAGCTTA+TGG - chr5_2:8815739-8815758 None:intergenic 40.0%
GAATCTGCAAGCAAGAATAG+AGG - chr5_2:8815782-8815801 None:intergenic 40.0%
ATCTGTTTCAGCTTACTCTC+TGG + chr5_2:8815917-8815936 Msa0755050:intron 40.0%
GCGTTTATAACAACACGTCT+TGG + chr5_2:8815980-8815999 Msa0755050:intron 40.0%
GAATGAAAATGAAGGGCTAC+TGG + chr5_2:8816073-8816092 Msa0755050:CDS 40.0%
AACTTCTGTGAAGTGTATGG+TGG + chr5_2:8816108-8816127 Msa0755050:intron 40.0%
AAATTGCAGTAATCACCCAG+CGG + chr5_2:8816169-8816188 Msa0755050:intron 40.0%
!! AACATAATTTGTTGGCAGGG+TGG + chr5_2:8816330-8816349 Msa0755050:intron 40.0%
! TTGCGAATGAGGTATTATGC+TGG + chr5_2:8816367-8816386 Msa0755050:CDS 40.0%
!! GAGGTATTATGCTGGCTTTA+TGG + chr5_2:8816375-8816394 Msa0755050:CDS 40.0%
AGAAGTTCCAAACGGTTGAA+AGG - chr5_2:8816563-8816582 None:intergenic 40.0%
! CAATTTTTCACAACAGCTCC+AGG - chr5_2:8816622-8816641 None:intergenic 40.0%
!! TAAGGCTTTGTTTGCGTGTT+TGG + chr5_2:8816905-8816924 Msa0755050:three_prime_UTR 40.0%
GGAGAGGACTTAAGGAAAAA+AGG + chr5_2:8816938-8816957 Msa0755050:three_prime_UTR 40.0%
TTGATTGTCCTGGAAGTGGA+CGG - chr5_2:8810258-8810277 None:intergenic 45.0%
TCCACTTCCAGGACAATCAA+CGG + chr5_2:8810258-8810277 Msa0755050:five_prime_UTR 45.0%
! TTTACCACCGTTGATTGTCC+TGG - chr5_2:8810268-8810287 None:intergenic 45.0%
CTCTCCAAAAATGCTTCCGA+TGG + chr5_2:8810351-8810370 Msa0755050:five_prime_UTR 45.0%
!!! CTCACCATCGGAAGCATTTT+TGG - chr5_2:8810358-8810377 None:intergenic 45.0%
TAAGGCCTACAACTACCTAC+TGG - chr5_2:8810536-8810555 None:intergenic 45.0%
! CGGCATTATTGGTTGAGCTA+AGG - chr5_2:8810554-8810573 None:intergenic 45.0%
GATGAATGTCCGTGCTTCAT+AGG + chr5_2:8810751-8810770 Msa0755050:five_prime_UTR 45.0%
AAACCAGTTACAGACTGCAC+TGG + chr5_2:8810817-8810836 Msa0755050:five_prime_UTR 45.0%
!! GCACTGGTTCTGTATGTAAC+TGG + chr5_2:8810833-8810852 Msa0755050:five_prime_UTR 45.0%
CTGTATGTAACTGGTGTGAG+CGG + chr5_2:8810842-8810861 Msa0755050:five_prime_UTR 45.0%
GGTCCCATCTTTATCGTTGT+CGG - chr5_2:8811126-8811145 None:intergenic 45.0%
AGAAGAAGAAGATGAAGCGG+CGG - chr5_2:8811177-8811196 None:intergenic 45.0%
! AGTATCGGAAGAGGAATCTG+CGG - chr5_2:8811231-8811250 None:intergenic 45.0%
TCCTCTTCCGATACTGGAAA+CGG + chr5_2:8811236-8811255 Msa0755050:CDS 45.0%
ACTAGCTCCGTTTCCAGTAT+CGG - chr5_2:8811246-8811265 None:intergenic 45.0%
! GGCGGTGATGATGAAGAAAA+TGG + chr5_2:8811275-8811294 Msa0755050:CDS 45.0%
CTTAGGACCTAACAAGCTCA+TGG - chr5_2:8811597-8811616 None:intergenic 45.0%
AATCGGGTTACACTTTCGAC+CGG + chr5_2:8811875-8811894 Msa0755050:intron 45.0%
CGAAGATGGAAGACTATGTC+TGG + chr5_2:8811984-8812003 Msa0755050:intron 45.0%
AAAACAAAATTGCGGGAGGG+TGG + chr5_2:8812150-8812169 Msa0755050:intron 45.0%
!! CCTAGGGTGCTCTTTTTGAT+CGG + chr5_2:8812257-8812276 Msa0755050:intron 45.0%
TAATCGACAAACACCAAGGC+AGG - chr5_2:8812313-8812332 None:intergenic 45.0%
CAAGGGCAGCATAATGATAG+AGG + chr5_2:8812501-8812520 Msa0755050:CDS 45.0%
CAGCATAATGATAGAGGAGC+TGG + chr5_2:8812507-8812526 Msa0755050:CDS 45.0%
TACCCAAAATTCTGCCTCTG+AGG - chr5_2:8812558-8812577 None:intergenic 45.0%
!! CAGAGGCAGAATTTTGGGTA+TGG + chr5_2:8812558-8812577 Msa0755050:CDS 45.0%
CAGAGACAAAACGTTCATCG+CGG - chr5_2:8812605-8812624 None:intergenic 45.0%
AGCAGCTATAGCAATGCCTA+TGG - chr5_2:8812984-8813003 None:intergenic 45.0%
! TTGGCCTTCCCATACTTTGA+TGG + chr5_2:8813619-8813638 Msa0755050:intron 45.0%
CACTCCATCAAAGTATGGGA+AGG - chr5_2:8813626-8813645 None:intergenic 45.0%
CTTCCCATACTTTGATGGAG+TGG + chr5_2:8813624-8813643 Msa0755050:intron 45.0%
TGGCCACTCCATCAAAGTAT+GGG - chr5_2:8813630-8813649 None:intergenic 45.0%
ATGGCCACTCCATCAAAGTA+TGG - chr5_2:8813631-8813650 None:intergenic 45.0%
! CTATCCACCATTGACTGCAT+AGG + chr5_2:8813703-8813722 Msa0755050:intron 45.0%
TCATCCTATGCAGTCAATGG+TGG - chr5_2:8813710-8813729 None:intergenic 45.0%
! CCATTGACTGCATAGGATGA+CGG + chr5_2:8813710-8813729 Msa0755050:intron 45.0%
GTAGCTTGGTAAGCGCTATT+TGG + chr5_2:8813941-8813960 Msa0755050:intron 45.0%
GACTTAGGCTCAGAAGGTTA+TGG + chr5_2:8814286-8814305 Msa0755050:intron 45.0%
GTACCGCAACAATCTGAACA+AGG + chr5_2:8814480-8814499 Msa0755050:CDS 45.0%
CTTATATTCGCCATGAGCCT+TGG + chr5_2:8814674-8814693 Msa0755050:CDS 45.0%
TTGTGTACTCCCATTTCCCA+AGG - chr5_2:8814694-8814713 None:intergenic 45.0%
! GGGAAATGGGAGTACACAAA+AGG + chr5_2:8814695-8814714 Msa0755050:CDS 45.0%
CAACAACAGGTAGCTGTTAG+GGG + chr5_2:8814912-8814931 Msa0755050:intron 45.0%
GACACTATCCAACCATGACT+AGG - chr5_2:8815016-8815035 None:intergenic 45.0%
TCTCAGCACCCATCAAGATA+CGG - chr5_2:8815436-8815455 None:intergenic 45.0%
!! TATCTTGATGGGTGCTGAGA+TGG + chr5_2:8815436-8815455 Msa0755050:CDS 45.0%
TGCTGTGATACGACTACTGA+TGG + chr5_2:8815461-8815480 Msa0755050:CDS 45.0%
CTTGCAGATTCAGTCATTCC+TGG + chr5_2:8815791-8815810 Msa0755050:intron 45.0%
AAATATATGGAACGCCTGCC+AGG - chr5_2:8815812-8815831 None:intergenic 45.0%
CAGCACAAGATCACAGATTG+CGG - chr5_2:8815865-8815884 None:intergenic 45.0%
GCATTTCAGTCCGAACAAGA+CGG - chr5_2:8816029-8816048 None:intergenic 45.0%
GTATGGTGGCAAACCTGTAT+TGG + chr5_2:8816122-8816141 Msa0755050:intron 45.0%
AGTTCCAAACGGTTGAAAGG+TGG - chr5_2:8816560-8816579 None:intergenic 45.0%
GAGCTTGCAGAAGTTCCAAA+CGG - chr5_2:8816571-8816590 None:intergenic 45.0%
!! ATCATCTGATCGAAGGTGCT+GGG - chr5_2:8816716-8816735 None:intergenic 45.0%
TGTTTGCGTGTTTGGAGGTA+AGG + chr5_2:8816913-8816932 Msa0755050:three_prime_UTR 45.0%
GTAAGGAAGGAGAGGACTTA+AGG + chr5_2:8816930-8816949 Msa0755050:three_prime_UTR 45.0%
!!! ATAATTTTTTTTATTTTTGT+AGG + chr5_2:8809952-8809971 Msa0755050:five_prime_UTR 5.0%
!! AAATTGTTAAATAAAAATAT+AGG - chr5_2:8815701-8815720 None:intergenic 5.0%
! TACAGAGAAAGAGGAGGCGT+TGG + chr5_2:8810156-8810175 Msa0755050:five_prime_UTR 50.0%
! ACCGTTGATTGTCCTGGAAG+TGG - chr5_2:8810262-8810281 None:intergenic 50.0%
ACTTCCAGGACAATCAACGG+TGG + chr5_2:8810261-8810280 Msa0755050:five_prime_UTR 50.0%
GCACGGACATTCATCGGATT+AGG - chr5_2:8810746-8810765 None:intergenic 50.0%
GAACCAGTGCAGTCTGTAAC+TGG - chr5_2:8810823-8810842 None:intergenic 50.0%
AATGACCATATTGCCCCTGG+CGG - chr5_2:8810913-8810932 None:intergenic 50.0%
GGAAATGACCATATTGCCCC+TGG - chr5_2:8810916-8810935 None:intergenic 50.0%
! TTCACGGGGAAGGACCTTTT+CGG + chr5_2:8811092-8811111 Msa0755050:five_prime_UTR 50.0%
TGTCGGAATCTTCGCCGAAA+AGG - chr5_2:8811109-8811128 None:intergenic 50.0%
! ACCTTTGGAGGAAGAAGCTG+CGG - chr5_2:8811207-8811226 None:intergenic 50.0%
AGAGGAATCTGCGGAACCTT+TGG - chr5_2:8811222-8811241 None:intergenic 50.0%
GCAGATTCCTCTTCCGATAC+TGG + chr5_2:8811230-8811249 Msa0755050:CDS 50.0%
! TCCGTTTCCAGTATCGGAAG+AGG - chr5_2:8811240-8811259 None:intergenic 50.0%
ACTGGAAACGGAGCTAGTAG+CGG + chr5_2:8811248-8811267 Msa0755050:CDS 50.0%
ATCGGGTTACACTTTCGACC+GGG + chr5_2:8811876-8811895 Msa0755050:intron 50.0%
AAACACCAAAGCACGAGCCT+AGG - chr5_2:8811903-8811922 None:intergenic 50.0%
TCAACGGTCGAGAGATTCCT+AGG + chr5_2:8812240-8812259 Msa0755050:intron 50.0%
CAACGGTCGAGAGATTCCTA+GGG + chr5_2:8812241-8812260 Msa0755050:intron 50.0%
!! CCGATCAAAAAGAGCACCCT+AGG - chr5_2:8812260-8812279 None:intergenic 50.0%
AATACGAACAACCCGGGAAG+AGG + chr5_2:8812453-8812472 Msa0755050:CDS 50.0%
ATACGAACAACCCGGGAAGA+GGG + chr5_2:8812454-8812473 Msa0755050:CDS 50.0%
AGACAAAACGTTCATCGCGG+TGG - chr5_2:8812602-8812621 None:intergenic 50.0%
GATTATCGTGTAGCGCCTAG+AGG - chr5_2:8813018-8813037 None:intergenic 50.0%
!! AGCCATAGGTGTCGCTATAG+TGG + chr5_2:8813272-8813291 Msa0755050:intron 50.0%
AGCCACTATAGCGACACCTA+TGG - chr5_2:8813277-8813296 None:intergenic 50.0%
! TGGTGGATAGCAGAGCAAAG+TGG - chr5_2:8813693-8813712 None:intergenic 50.0%
CCGTCATCCTATGCAGTCAA+TGG - chr5_2:8813713-8813732 None:intergenic 50.0%
TGCTATAGTCGTGCAGAAGG+CGG + chr5_2:8813898-8813917 Msa0755050:CDS 50.0%
!! TTCTGGGATCTTCAGTGGCA+AGG - chr5_2:8815334-8815353 None:intergenic 50.0%
!! TGCTCTTCTGGGATCTTCAG+TGG - chr5_2:8815339-8815358 None:intergenic 50.0%
GAAGATCCCAGAAGAGCAGA+CGG + chr5_2:8815341-8815360 Msa0755050:CDS 50.0%
CAGATTCAGTCATTCCTGGC+AGG + chr5_2:8815795-8815814 Msa0755050:intron 50.0%
ACACGTCTTGGCTGTCATAC+AGG + chr5_2:8815992-8816011 Msa0755050:intron 50.0%
CACGTCTTGGCTGTCATACA+GGG + chr5_2:8815993-8816012 Msa0755050:intron 50.0%
CTGTCATACAGGGATGATGC+AGG + chr5_2:8816003-8816022 Msa0755050:intron 50.0%
! ATGATGCAGGCCGTCTTGTT+CGG + chr5_2:8816016-8816035 Msa0755050:CDS 50.0%
GAAAATGAAGGGCTACTGGC+AGG + chr5_2:8816077-8816096 Msa0755050:CDS 50.0%
CGTGTTAATGCAGATCCGCT+GGG - chr5_2:8816187-8816206 None:intergenic 50.0%
ACGTGTTAATGCAGATCCGC+TGG - chr5_2:8816188-8816207 None:intergenic 50.0%
ATACCTCATTCGCAAACGCC+AGG - chr5_2:8816362-8816381 None:intergenic 50.0%
! CATCATCTGATCGAAGGTGC+TGG - chr5_2:8816717-8816736 None:intergenic 50.0%
!! GGCTTTGTTTGCGTGTTTGG+AGG + chr5_2:8816908-8816927 Msa0755050:three_prime_UTR 50.0%
TGCGTGTTTGGAGGTAAGGA+AGG + chr5_2:8816917-8816936 Msa0755050:three_prime_UTR 50.0%
GTTTGGAGGTAAGGAAGGAG+AGG + chr5_2:8816922-8816941 Msa0755050:three_prime_UTR 50.0%
!! AGGAGGCGTTGGATCCAAAG+CGG + chr5_2:8810167-8810186 Msa0755050:five_prime_UTR 55.0%
AACGGATGCAACCTCCGCTT+TGG - chr5_2:8810184-8810203 None:intergenic 55.0%
CGGAGGTTGCATCCGTTGAT+CGG + chr5_2:8810187-8810206 Msa0755050:five_prime_UTR 55.0%
!! TGGAGAGAGTGTTGGAGCGA+GGG - chr5_2:8810338-8810357 None:intergenic 55.0%
!! TTGGAGAGAGTGTTGGAGCG+AGG - chr5_2:8810339-8810358 None:intergenic 55.0%
TACCGACGCGTGTCTGACAT+TGG + chr5_2:8810716-8810735 Msa0755050:five_prime_UTR 55.0%
ACCGACGCGTGTCTGACATT+GGG + chr5_2:8810717-8810736 Msa0755050:five_prime_UTR 55.0%
TCCCAATGTCAGACACGCGT+CGG - chr5_2:8810721-8810740 None:intergenic 55.0%
CGGTTGTTAACAACCGCTGC+CGG + chr5_2:8810862-8810881 Msa0755050:five_prime_UTR 55.0%
GGCGGTAGTTAACTACCGCT+GGG - chr5_2:8810895-8810914 None:intergenic 55.0%
TGGCGGTAGTTAACTACCGC+TGG - chr5_2:8810896-8810915 None:intergenic 55.0%
AGCGGTAGTTAACTACCGCC+AGG + chr5_2:8810895-8810914 Msa0755050:five_prime_UTR 55.0%
GCGGTAGTTAACTACCGCCA+GGG + chr5_2:8810896-8810915 Msa0755050:five_prime_UTR 55.0%
CGGTAGTTAACTACCGCCAG+GGG + chr5_2:8810897-8810916 Msa0755050:five_prime_UTR 55.0%
AACTACCGCCAGGGGCAATA+TGG + chr5_2:8810905-8810924 Msa0755050:five_prime_UTR 55.0%
AGAAGAAGATGAAGCGGCGG+AGG - chr5_2:8811174-8811193 None:intergenic 55.0%
TCCGCAGCTTCTTCCTCCAA+AGG + chr5_2:8811203-8811222 Msa0755050:CDS 55.0%
GGAATCTGCGGAACCTTTGG+AGG - chr5_2:8811219-8811238 None:intergenic 55.0%
TACACTTTCGACCGGGTCCT+AGG + chr5_2:8811883-8811902 Msa0755050:intron 55.0%
TAAGCGCTTGTGTCCTGCCT+TGG + chr5_2:8812297-8812316 Msa0755050:intron 55.0%
TACGAACAACCCGGGAAGAG+GGG + chr5_2:8812455-8812474 Msa0755050:CDS 55.0%
GACGTGGTCGTTGGCAACAA+GGG + chr5_2:8812484-8812503 Msa0755050:CDS 55.0%
TGAGGATAAGGTCCAGGACG+CGG - chr5_2:8812540-8812559 None:intergenic 55.0%
GTCCTGGACCTTATCCTCAG+AGG + chr5_2:8812541-8812560 Msa0755050:CDS 55.0%
! TGCCTCTGAGGATAAGGTCC+AGG - chr5_2:8812546-8812565 None:intergenic 55.0%
! GCTATAGCTGCTTTGCGCTG+TGG + chr5_2:8812992-8813011 Msa0755050:intron 55.0%
GCCTGCTATAGTCGTGCAGA+AGG + chr5_2:8813895-8813914 Msa0755050:CDS 55.0%
GCCTTCTGCACGACTATAGC+AGG - chr5_2:8813899-8813918 None:intergenic 55.0%
GCTATAGTCGTGCAGAAGGC+GGG + chr5_2:8813899-8813918 Msa0755050:CDS 55.0%
CTATAGTCGTGCAGAAGGCG+GGG + chr5_2:8813900-8813919 Msa0755050:CDS 55.0%
TCGCCATGAGCCTTGGGAAA+TGG + chr5_2:8814681-8814700 Msa0755050:CDS 55.0%
CGCCATGAGCCTTGGGAAAT+GGG + chr5_2:8814682-8814701 Msa0755050:CDS 55.0%
CTCCCATTTCCCAAGGCTCA+TGG - chr5_2:8814687-8814706 None:intergenic 55.0%
GGGGCTCACCGTATCTTGAT+GGG + chr5_2:8815425-8815444 Msa0755050:CDS 55.0%
!! AGGCGTTGGATCCAAAGCGG+AGG + chr5_2:8810170-8810189 Msa0755050:five_prime_UTR 60.0%
GATCCTCACCGTCCACTTCC+AGG + chr5_2:8810247-8810266 Msa0755050:five_prime_UTR 60.0%
TGTCCTGGAAGTGGACGGTG+AGG - chr5_2:8810253-8810272 None:intergenic 60.0%
ACTACCGCTGGGAAACACGC+CGG - chr5_2:8810884-8810903 None:intergenic 60.0%
GGAAACGGAGCTAGTAGCGG+CGG + chr5_2:8811251-8811270 Msa0755050:CDS 60.0%
CAAAGCACGAGCCTAGGACC+CGG - chr5_2:8811897-8811916 None:intergenic 60.0%
ACGAACAACCCGGGAAGAGG+GGG + chr5_2:8812456-8812475 Msa0755050:CDS 60.0%
GGACGTGGTCGTTGGCAACA+AGG + chr5_2:8812483-8812502 Msa0755050:CDS 60.0%
TGCTTTGCGCTGTGGCCTCT+AGG + chr5_2:8813000-8813019 Msa0755050:intron 60.0%
GTGTTTCATGTGGCGCCTGG+AGG - chr5_2:8813311-8813330 None:intergenic 60.0%
ACGGTGTTTCATGTGGCGCC+TGG - chr5_2:8813314-8813333 None:intergenic 60.0%
GGCTCTCCGTCTGCTCTTCT+GGG - chr5_2:8815350-8815369 None:intergenic 60.0%
GGGGGCTCACCGTATCTTGA+TGG + chr5_2:8815424-8815443 Msa0755050:CDS 60.0%
GTGCCTGGCGTTTGCGAATG+AGG + chr5_2:8816356-8816375 Msa0755050:CDS 60.0%
CGCGCCACCTTTCAACCGTT+TGG + chr5_2:8816553-8816572 Msa0755050:CDS 60.0%
AACGGAGCTAGTAGCGGCGG+TGG + chr5_2:8811254-8811273 Msa0755050:CDS 65.0%
CGGGTCCTAGGCTCGTGCTT+TGG + chr5_2:8811895-8811914 Msa0755050:intron 65.0%
AACAACCCGGGAAGAGGGGG+TGG + chr5_2:8812459-8812478 Msa0755050:CDS 65.0%
GCTGGCATTCTTCCGCGTCC+TGG + chr5_2:8812525-8812544 Msa0755050:CDS 65.0%
GGCTTTGCGCTGTAGCCTCC+AGG + chr5_2:8813293-8813312 Msa0755050:intron 65.0%
CGGCTCTCCGTCTGCTCTTC+TGG - chr5_2:8815351-8815370 None:intergenic 65.0%
TTGGCAGGGTGGAGTGTGCC+TGG + chr5_2:8816341-8816360 Msa0755050:intron 65.0%
GCTGGGAAACACGCCGGCAG+CGG - chr5_2:8810878-8810897 None:intergenic 70.0%
GCTGCCGGCGTGTTTCCCAG+CGG + chr5_2:8810877-8810896 Msa0755050:five_prime_UTR 70.0%
GGAGCTAGTAGCGGCGGTGG+CGG + chr5_2:8811257-8811276 Msa0755050:CDS 70.0%
AACCCGGGAAGAGGGGGTGG+TGG + chr5_2:8812462-8812481 Msa0755050:CDS 70.0%
GTCCACCACCCCCTCTTCCC+GGG - chr5_2:8812467-8812486 None:intergenic 70.0%
CGTCCACCACCCCCTCTTCC+CGG - chr5_2:8812468-8812487 None:intergenic 70.0%
!! GGAAGAGGGGGTGGTGGACG+TGG + chr5_2:8812468-8812487 Msa0755050:CDS 70.0%
!! GGGGTGGTGGACGTGGTCGT+TGG + chr5_2:8812475-8812494 Msa0755050:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 8809893 8816975 8809893 ID=Msa0755050;Name=Msa0755050
chr5_2 mRNA 8809893 8816975 8809893 ID=Msa0755050-mRNA-1;Parent=Msa0755050;Name=Msa0755050-mRNA-1;_AED=0.31;_eAED=0.31;_QI=1245|1|1|1|1|1|13|341|491
chr5_2 exon 8809893 8811417 8809893 ID=Msa0755050-mRNA-1:exon:4006;Parent=Msa0755050-mRNA-1
chr5_2 exon 8812433 8812683 8812433 ID=Msa0755050-mRNA-1:exon:4007;Parent=Msa0755050-mRNA-1
chr5_2 exon 8813883 8813948 8813883 ID=Msa0755050-mRNA-1:exon:4008;Parent=Msa0755050-mRNA-1
chr5_2 exon 8814065 8814143 8814065 ID=Msa0755050-mRNA-1:exon:4009;Parent=Msa0755050-mRNA-1
chr5_2 exon 8814287 8814366 8814287 ID=Msa0755050-mRNA-1:exon:4010;Parent=Msa0755050-mRNA-1
chr5_2 exon 8814478 8814501 8814478 ID=Msa0755050-mRNA-1:exon:4011;Parent=Msa0755050-mRNA-1
chr5_2 exon 8814661 8814785 8814661 ID=Msa0755050-mRNA-1:exon:4012;Parent=Msa0755050-mRNA-1
chr5_2 exon 8815304 8815520 8815304 ID=Msa0755050-mRNA-1:exon:4013;Parent=Msa0755050-mRNA-1
chr5_2 exon 8815636 8815689 8815636 ID=Msa0755050-mRNA-1:exon:4014;Parent=Msa0755050-mRNA-1
chr5_2 exon 8815798 8815844 8815798 ID=Msa0755050-mRNA-1:exon:4015;Parent=Msa0755050-mRNA-1
chr5_2 exon 8816014 8816098 8816014 ID=Msa0755050-mRNA-1:exon:4016;Parent=Msa0755050-mRNA-1
chr5_2 exon 8816348 8816411 8816348 ID=Msa0755050-mRNA-1:exon:4017;Parent=Msa0755050-mRNA-1
chr5_2 exon 8816531 8816975 8816531 ID=Msa0755050-mRNA-1:exon:4018;Parent=Msa0755050-mRNA-1
chr5_2 five_prime_UTR 8809893 8811137 8809893 ID=Msa0755050-mRNA-1:five_prime_utr;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8811138 8811417 8811138 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8812433 8812683 8812433 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8813883 8813948 8813883 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8814065 8814143 8814065 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8814287 8814366 8814287 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8814478 8814501 8814478 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8814661 8814785 8814661 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8815304 8815520 8815304 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8815636 8815689 8815636 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8815798 8815844 8815798 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8816014 8816098 8816014 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8816348 8816411 8816348 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 CDS 8816531 8816634 8816531 ID=Msa0755050-mRNA-1:cds;Parent=Msa0755050-mRNA-1
chr5_2 three_prime_UTR 8816635 8816975 8816635 ID=Msa0755050-mRNA-1:three_prime_utr;Parent=Msa0755050-mRNA-1
Gene Sequence

>Msa0755050

ATGGGACCCACTCTTCTTCTTCGTCTTCTTCTTCCTCCGCCGCTTCATCTTCTTCTTCTTCATCTTCCGCAGCTTCTTCCTCCAAAGGTTCCGCAGATTCCTCTTCCGATACTGGAAACGGAGCTAGTAGCGGCGGTGGCGGTGATGATGAAGAAAATGGTGATGTTGTTGGTTGATTCTCATCATGATGATGATGATGATCATAATGATAGAGATCTGTTTGGTGATGATAATGAAGATTATTGTAAAACCCTTGCTAAAAGTCCTTACCCTATTCCTGTATTGCCTCCCATCCGTAATAATACGAACAACCCGGGAAGAGGGGGTGGTGGACGTGGTCGTTGGCAACAAGGGCAGCATAATGATAGAGGAGCTGGCATTCTTCCGCGTCCTGGACCTTATCCTCAGAGGCAGAATTTTGGGTATGGTAATAGGTTTCAGAATGGCCACCGCGATGAACGTTTTGTCTCTGAAATGAAGCTCTCGAAAAGTGAAGAAACTCTGTCAAGAAAGGTTATTGCTTTTCAAGAGCCTTGTGAACTTGCCTGCTATAGTCGTGCAGAAGGCGGGGAAGTGTATTTTGATGATCGTAGCTTGAGACTTTTTAAACGCCATATCACTGAAGATATTGGAGCTGATTTGAACGATGGATATGATACATACATTCCCAAAAAAGACTTAGGCTCAGAAGGTTATGGCGATCTTCTTGCTTGCATAAGAGATAAAAAAATCCATCTTCAAAACATCCATTTTGTGACGTACCGCAACAATCTGAACAAGATACTTGCTACGGCTTATATTCGCCATGAGCCTTGGGAAATGGGAGTACACAAAAGGAATGGTGTTGTCTATCTCGATGTGCACAAGTTACCAGAAAGACCACAAAGTGATTTAGATCGCAGGAGATGTTATCTGGGTTACTCTTTTGAGAGCCTTGCCACTGAAGATCCCAGAAGAGCAGACGGAGAGCCGATACATGATGTTGATGCCAATGTTGAATTTTGTTCTGTGATTAAGACAAAATTGGGGGCTCACCGTATCTTGATGGGTGCTGAGATGGATTGCTGTGATACGACTACTGATGGAAAGAGATTTTATGTGGAGTTAAAGACAAGTTACGAGTTGAATTATCGTAACGAGGAAAAATTTGAGAGACAGAAACTGCTAAAGTTTTGGATTCAGTCATTCCTGGCAGGCGTTCCATATATTTGTATTGGATTTAGGGATGATGCAGGCCGTCTTGTTCGGACTGAAATGCTTAGAACCAAAGATATTACACAGAGAATGAAAATGAAGGGCTACTGGCAGGGTGGAGTGTGCCTGGCGTTTGCGAATGAGGTATTATGCTGGCTTTATGGAACAGTCAAAGAAAATGAAGATTACATATTGCAGTTCGCGCCACCTTTCAACCGTTTGGAACTTCTGCAAGCTCACTCTTGTCCAGATGTAATAACAAGTCACCTGGAGCTGTTGTGA
Protein sequence

>Msa0755050

MGPTLLLRLLLPPPLHLLLLHLPQLLPPKVPQIPLPILETELVAAVAVMMKKMVMLLVDSHHDDDDDHNDRDLFGDDNEDYCKTLAKSPYPIPVLPPIRNNTNNPGRGGGGRGRWQQGQHNDRGAGILPRPGPYPQRQNFGYGNRFQNGHRDERFVSEMKLSKSEETLSRKVIAFQEPCELACYSRAEGGEVYFDDRSLRLFKRHITEDIGADLNDGYDTYIPKKDLGSEGYGDLLACIRDKKIHLQNIHFVTYRNNLNKILATAYIRHEPWEMGVHKRNGVVYLDVHKLPERPQSDLDRRRCYLGYSFESLATEDPRRADGEPIHDVDANVEFCSVIKTKLGAHRILMGAEMDCCDTTTDGKRFYVELKTSYELNYRNEEKFERQKLLKFWIQSFLAGVPYICIGFRDDAGRLVRTEMLRTKDITQRMKMKGYWQGGVCLAFANEVLCWLYGTVKENEDYILQFAPPFNRLELLQAHSCPDVITSHLELL*