Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004630 | XP_003621056.2 | 93.820 | 178 | 11 | 0 | 1 | 178 | 1 | 178 | 1.18e-118 | 343 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004630 | sp|Q9SXZ2|FT_ARATH | 68.182 | 176 | 55 | 1 | 1 | 176 | 1 | 175 | 3.41e-88 | 258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004630 | F8T7T2 | 93.820 | 178 | 11 | 0 | 1 | 178 | 1 | 178 | 5.65e-119 | 343 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074860 | Msa1004630 | 0.802952 | 4.394606e-49 | -8.615850e-47 |
| Msa0081700 | Msa1004630 | 0.811631 | 6.355301e-51 | -8.615850e-47 |
| Msa0098500 | Msa1004630 | 0.803694 | 3.084901e-49 | -8.615850e-47 |
| Msa0654400 | Msa1004630 | 0.817835 | 2.683593e-52 | -8.615850e-47 |
| Msa0654500 | Msa1004630 | 0.818037 | 2.415778e-52 | -8.615850e-47 |
| Msa0667670 | Msa1004630 | 0.807638 | 4.584914e-50 | -8.615850e-47 |
| Msa0676290 | Msa1004630 | 0.807697 | 4.453136e-50 | -8.615850e-47 |
| Msa0690100 | Msa1004630 | 0.804854 | 1.768565e-49 | -8.615850e-47 |
| Msa0742690 | Msa1004630 | 0.805081 | 1.585736e-49 | -8.615850e-47 |
| Msa0779830 | Msa1004630 | 0.811422 | 7.057232e-51 | -8.615850e-47 |
| Msa0788450 | Msa1004630 | 0.811526 | 6.699875e-51 | -8.615850e-47 |
| Msa0825570 | Msa1004630 | 0.811228 | 7.776808e-51 | -8.615850e-47 |
| Msa0826540 | Msa1004630 | 0.803884 | 2.816681e-49 | -8.615850e-47 |
| Msa0827560 | Msa1004630 | 0.800828 | 1.199839e-48 | -8.615850e-47 |
| Msa0127910 | Msa1004630 | 0.804780 | 1.832829e-49 | -8.615850e-47 |
| Msa0139930 | Msa1004630 | 0.861516 | 9.711820e-64 | -8.615850e-47 |
| Msa0174060 | Msa1004630 | 0.820581 | 6.358182e-53 | -8.615850e-47 |
| Msa0367200 | Msa1004630 | 0.802277 | 6.054248e-49 | -8.615850e-47 |
| Msa0368450 | Msa1004630 | 0.834835 | 2.381248e-56 | -8.615850e-47 |
| Msa0390590 | Msa1004630 | 0.801507 | 8.715694e-49 | -8.615850e-47 |
| Msa0414930 | Msa1004630 | 0.810714 | 1.004924e-50 | -8.615850e-47 |
| Msa0427890 | Msa1004630 | 0.814615 | 1.407448e-51 | -8.615850e-47 |
| Msa0460510 | Msa1004630 | 0.800090 | 1.696159e-48 | -8.615850e-47 |
| Msa0461620 | Msa1004630 | 0.828821 | 7.265149e-55 | -8.615850e-47 |
| Msa0474120 | Msa1004630 | 0.814385 | 1.582959e-51 | -8.615850e-47 |
| Msa0993590 | Msa1004630 | 0.802629 | 5.122668e-49 | -8.615850e-47 |
| Msa1004310 | Msa1004630 | 0.828543 | 8.481727e-55 | -8.615850e-47 |
| Msa1004630 | Msa1004660 | 0.898778 | 3.801521e-77 | -8.615850e-47 |
| Msa1004630 | Msa1031310 | 0.819312 | 1.240544e-52 | -8.615850e-47 |
| Msa1004630 | Msa1045940 | 0.843495 | 1.353128e-58 | -8.615850e-47 |
| Msa1004630 | Msa1046980 | 0.900078 | 1.049189e-77 | -8.615850e-47 |
| Msa1004630 | Msa1046990 | 0.902511 | 9.000299e-79 | -8.615850e-47 |
| Msa1004630 | Msa1057940 | 0.820316 | 7.316287e-53 | -8.615850e-47 |
| Msa1004630 | Msa1091120 | 0.836409 | 9.519267e-57 | -8.615850e-47 |
| Msa1004630 | Msa1091130 | 0.883878 | 3.089733e-71 | -8.615850e-47 |
| Msa1004630 | Msa1101050 | 0.818077 | 2.365684e-52 | -8.615850e-47 |
| Msa1004630 | Msa1134430 | 0.847624 | 1.027974e-59 | -8.615850e-47 |
| Msa1004630 | Msa1134460 | 0.864442 | 1.212214e-64 | -8.615850e-47 |
| Msa1004630 | Msa1134480 | 0.893418 | 6.405933e-75 | -8.615850e-47 |
| Msa1004630 | Msa1144380 | 0.812596 | 3.915902e-51 | -8.615850e-47 |
| Msa1004630 | Msa1158280 | 0.828877 | 7.042281e-55 | -8.615850e-47 |
| Msa1004630 | Msa1199540 | 0.803077 | 4.139809e-49 | -8.615850e-47 |
| Msa1004630 | Msa1212150 | 0.808627 | 2.822984e-50 | -8.615850e-47 |
| Msa1004630 | Msa1212210 | 0.803218 | 3.872135e-49 | -8.615850e-47 |
| Msa1004630 | Msa1277270 | 0.802947 | 4.405906e-49 | -8.615850e-47 |
| Msa1004630 | Msa1305970 | 0.813906 | 2.018608e-51 | -8.615850e-47 |
| Msa1004630 | Msa1311600 | 0.800892 | 1.164255e-48 | -8.615850e-47 |
| Msa1004630 | Msa1386910 | 0.803112 | 4.071225e-49 | -8.615850e-47 |
| Msa1004630 | Msa1389670 | 0.809976 | 1.450032e-50 | -8.615850e-47 |
| Msa1004630 | Msa1397560 | 0.811267 | 7.626290e-51 | -8.615850e-47 |
| Msa1004630 | Msa1410480 | 0.819916 | 9.031417e-53 | -8.615850e-47 |
| Msa1004630 | Msa1410500 | 0.806037 | 9.989541e-50 | -8.615850e-47 |
| Msa1004630 | Msa1421520 | 0.811756 | 5.970416e-51 | -8.615850e-47 |
| Msa0506090 | Msa1004630 | 0.810842 | 9.427256e-51 | -8.615850e-47 |
| Msa0507960 | Msa1004630 | 0.815360 | 9.620380e-52 | -8.615850e-47 |
| Msa0521260 | Msa1004630 | 0.807642 | 4.574000e-50 | -8.615850e-47 |
| Msa0533610 | Msa1004630 | 0.809186 | 2.142586e-50 | -8.615850e-47 |
| Msa0550990 | Msa1004630 | 0.801132 | 1.040142e-48 | -8.615850e-47 |
| Msa0559440 | Msa1004630 | 0.824433 | 8.091972e-54 | -8.615850e-47 |
| Msa0559640 | Msa1004630 | 0.817022 | 4.089635e-52 | -8.615850e-47 |
| Msa0571900 | Msa1004630 | 0.801626 | 8.241298e-49 | -8.615850e-47 |
| Msa0862750 | Msa1004630 | 0.806427 | 8.268407e-50 | -8.615850e-47 |
| Msa0869320 | Msa1004630 | 0.820019 | 8.556570e-53 | -8.615850e-47 |
| Msa0870220 | Msa1004630 | 0.814246 | 1.698746e-51 | -8.615850e-47 |
| Msa0903460 | Msa1004630 | 0.812831 | 3.478990e-51 | -8.615850e-47 |
| Msa0934290 | Msa1004630 | 0.818309 | 2.096045e-52 | -8.615850e-47 |
| Msa0935930 | Msa1004630 | 0.820892 | 5.394520e-53 | -8.615850e-47 |
| Msa0971780 | Msa1004630 | 0.820314 | 7.321924e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004630 | MtrunA17_Chr7g0214761 | 93.820 | 178 | 11 | 0 | 1 | 178 | 1 | 178 | 1.09e-122 | 343 |
| Msa1004630 | MtrunA17_Chr7g0214771 | 87.640 | 178 | 22 | 0 | 1 | 178 | 1 | 178 | 1.49e-115 | 325 |
| Msa1004630 | MtrunA17_Chr6g0461711 | 72.727 | 176 | 47 | 1 | 1 | 176 | 1 | 175 | 4.71e-92 | 265 |
| Msa1004630 | MtrunA17_Chr7g0252784 | 71.839 | 174 | 48 | 1 | 1 | 174 | 1 | 173 | 1.32e-89 | 259 |
| Msa1004630 | MtrunA17_Chr7g0252800 | 66.071 | 168 | 56 | 1 | 7 | 174 | 8 | 174 | 2.80e-79 | 233 |
| Msa1004630 | MtrunA17_Chr7g0252811 | 62.857 | 175 | 60 | 3 | 1 | 175 | 26 | 195 | 3.58e-76 | 226 |
| Msa1004630 | MtrunA17_Chr6g0472451 | 54.971 | 171 | 76 | 1 | 4 | 174 | 3 | 172 | 2.85e-66 | 200 |
| Msa1004630 | MtrunA17_Chr7g0266201 | 54.286 | 175 | 78 | 2 | 1 | 174 | 1 | 174 | 1.08e-62 | 191 |
| Msa1004630 | MtrunA17_Chr1g0178751 | 53.125 | 160 | 72 | 2 | 7 | 164 | 7 | 165 | 3.13e-58 | 180 |
| Msa1004630 | MtrunA17_Chr2g0321301 | 49.112 | 169 | 84 | 2 | 7 | 174 | 6 | 173 | 6.99e-58 | 179 |
| Msa1004630 | MtrunA17_Chr8g0392741 | 50.909 | 165 | 78 | 3 | 5 | 168 | 5 | 167 | 8.31e-48 | 153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004630 | AT1G65480.2 | 68.182 | 176 | 55 | 1 | 1 | 176 | 45 | 219 | 3.20e-89 | 260 |
| Msa1004630 | AT1G65480.1 | 68.182 | 176 | 55 | 1 | 1 | 176 | 1 | 175 | 3.47e-89 | 258 |
| Msa1004630 | AT4G20370.1 | 68.000 | 175 | 55 | 1 | 1 | 175 | 1 | 174 | 3.41e-86 | 251 |
| Msa1004630 | AT5G62040.1 | 54.762 | 168 | 75 | 1 | 4 | 170 | 3 | 170 | 1.35e-65 | 199 |
| Msa1004630 | AT5G03840.1 | 53.977 | 176 | 77 | 3 | 1 | 174 | 4 | 177 | 1.89e-62 | 191 |
| Msa1004630 | AT2G27550.1 | 51.462 | 171 | 82 | 1 | 5 | 174 | 5 | 175 | 1.98e-61 | 188 |
| Msa1004630 | AT1G18100.1 | 53.488 | 172 | 76 | 3 | 5 | 174 | 4 | 173 | 1.48e-54 | 171 |
Find 58 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGGTATTCCCTCATATT+AGG | 0.216132 | 7_1:+2219656 | None:intergenic |
| AGAGGATTCATTGATTTAAT+AGG | 0.217328 | 7_1:+2221205 | None:intergenic |
| TTCAATTGTCAACGAGAAAA+TGG | 0.223614 | 7_1:-2217471 | Msa1004630:CDS |
| CTTGTGGTTTGTGGTGTAAT+TGG | 0.261555 | 7_1:-2221184 | Msa1004630:CDS |
| TTTGCAGAAGTTTATAATCT+TGG | 0.279344 | 7_1:-2217516 | Msa1004630:CDS |
| CTTATCTATATCGTGCGATA+TGG | 0.292937 | 7_1:+2217399 | None:intergenic |
| TTGCTAGGGCTTGGTCCATC+AGG | 0.306220 | 7_1:+2219680 | None:intergenic |
| TGGTGTAATTGGAGATGTTT+TGG | 0.321102 | 7_1:-2221173 | Msa1004630:CDS |
| TGTTGTTTAGGCAACCTTGT+AGG | 0.357429 | 7_1:-2217587 | Msa1004630:CDS |
| GCAGGTATTCCCTCATATTA+GGG | 0.362646 | 7_1:+2219657 | None:intergenic |
| CCCTGTAGTCGCTGGAATAT+TGG | 0.373232 | 7_1:+2218339 | None:intergenic |
| CCCTCATATTAGGGTTGCTA+GGG | 0.374720 | 7_1:+2219666 | None:intergenic |
| GTGTGATATTTGTGTTGTTT+AGG | 0.376720 | 7_1:-2217599 | Msa1004630:CDS |
| ATATTAGGGTTGCTAGGGCT+TGG | 0.390387 | 7_1:+2219671 | None:intergenic |
| TTACAAATTCAGTGTCTTTG+AGG | 0.412870 | 7_1:-2221144 | Msa1004630:CDS |
| ATGAATCCTCTTGTGGTTTG+TGG | 0.422228 | 7_1:-2221193 | Msa1004630:CDS |
| TGTCAACGAGAAAATGGTTC+TGG | 0.429526 | 7_1:-2217465 | Msa1004630:CDS |
| GCGACTACAGGGACAACTTT+CGG | 0.432307 | 7_1:-2218328 | Msa1004630:intron |
| GCCCTAGCAACCCTAATATG+AGG | 0.433466 | 7_1:-2219667 | Msa1004630:CDS |
| TACAAATTCAGTGTCTTTGA+GGG | 0.441798 | 7_1:-2221143 | Msa1004630:CDS |
| CACCAACTTGAACTCTTGGT+TGG | 0.442454 | 7_1:+2221056 | None:intergenic |
| TGTCCACCAACTTGAACTCT+TGG | 0.448736 | 7_1:+2221052 | None:intergenic |
| AAAGACACTGAATTTGTAAA+GGG | 0.449639 | 7_1:+2221148 | None:intergenic |
| ACCAATATTCCAGCGACTAC+AGG | 0.450659 | 7_1:-2218340 | Msa1004630:CDS |
| TGAATCCCTGATGTTGGTCT+TGG | 0.453418 | 7_1:+2217624 | None:intergenic |
| CAAAGACACTGAATTTGTAA+AGG | 0.477373 | 7_1:+2221147 | None:intergenic |
| GAAAGTCCAAGACCAACATC+AGG | 0.479268 | 7_1:-2217630 | Msa1004630:CDS |
| TCCCTCATATTAGGGTTGCT+AGG | 0.481348 | 7_1:+2219665 | None:intergenic |
| TTGAAATAGAGAGCAGCAAC+AGG | 0.483630 | 7_1:+2217489 | None:intergenic |
| TGCTAGGGCTTGGTCCATCA+GGG | 0.485165 | 7_1:+2219681 | None:intergenic |
| ATAGATAAGAAATAATCGTT+TGG | 0.490054 | 7_1:-2217385 | Msa1004630:three_prime_UTR |
| TAAATCAATGAATCCTCTTG+TGG | 0.504712 | 7_1:-2221200 | Msa1004630:CDS |
| AAAGTTGTCCCTGTAGTCGC+TGG | 0.509224 | 7_1:+2218331 | None:intergenic |
| AGGCTCACTATATTAGCTCC+TGG | 0.523146 | 7_1:-2217567 | Msa1004630:CDS |
| AACTTCCTACTTACCAATGC+AGG | 0.524098 | 7_1:+2219639 | None:intergenic |
| ATATGAGGGAATACCTGCAT+TGG | 0.531611 | 7_1:-2219652 | Msa1004630:intron |
| AAGTTGGTGGACATGACCTC+AGG | 0.539063 | 7_1:-2221042 | Msa1004630:CDS |
| GGTTGGTTGACTATCTGAGA+GGG | 0.539901 | 7_1:+2221073 | None:intergenic |
| GAGAAAATGGTTCTGGTGGA+AGG | 0.541973 | 7_1:-2217458 | Msa1004630:CDS |
| CAGGTGATGGTGGACCCTGA+TGG | 0.543435 | 7_1:-2219695 | Msa1004630:CDS |
| GCTAATATAGTGAGCCTACA+AGG | 0.546035 | 7_1:+2217573 | None:intergenic |
| TAATAATAGTTATAACATGA+TGG | 0.555867 | 7_1:+2217333 | None:intergenic |
| CAACCAAGAGTTCAAGTTGG+TGG | 0.573770 | 7_1:-2221055 | Msa1004630:CDS |
| CAACGAGAAAATGGTTCTGG+TGG | 0.575115 | 7_1:-2217462 | Msa1004630:CDS |
| CCCTAGCAACCCTAATATGA+GGG | 0.588503 | 7_1:-2219666 | Msa1004630:CDS |
| CTATTATTATAATAATCTAG+TGG | 0.590325 | 7_1:-2217319 | Msa1004630:three_prime_UTR |
| ACACGATGAATCCCTGATGT+TGG | 0.591037 | 7_1:+2217618 | None:intergenic |
| CCAATATTCCAGCGACTACA+GGG | 0.594633 | 7_1:-2218339 | Msa1004630:CDS |
| TGGTTGGTTGACTATCTGAG+AGG | 0.609629 | 7_1:+2221072 | None:intergenic |
| ATTACACCACAAACCACAAG+AGG | 0.610357 | 7_1:+2221187 | None:intergenic |
| TCACTATATTAGCTCCTGGA+TGG | 0.614938 | 7_1:-2217563 | Msa1004630:CDS |
| AAAGTCCAAGACCAACATCA+GGG | 0.617461 | 7_1:-2217629 | Msa1004630:CDS |
| CCTCAGGACTCTATACACTC+TGG | 0.640356 | 7_1:-2221026 | Msa1004630:intron |
| AAAATGGTTCTGGTGGAAGG+AGG | 0.651291 | 7_1:-2217455 | Msa1004630:CDS |
| AACCAACCAAGAGTTCAAGT+TGG | 0.659781 | 7_1:-2221058 | Msa1004630:CDS |
| AACAAAGAAGTCAACAACGG+TGG | 0.701619 | 7_1:-2221106 | Msa1004630:CDS |
| AATAACAAAGAAGTCAACAA+CGG | 0.709279 | 7_1:-2221109 | Msa1004630:CDS |
| CCAGAGTGTATAGAGTCCTG+AGG | 0.732541 | 7_1:+2221026 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATTGTAAAGTTATAAA+GGG | + | chr7_1:2218469-2218488 | None:intergenic | 10.0% |
| !! | AATTTATTGTAAAGTTATAA+AGG | + | chr7_1:2218470-2218489 | None:intergenic | 10.0% |
| !! | CTTTACAATAAATTATAAAT+AGG | - | chr7_1:2218476-2218495 | Msa1004630:intron | 10.0% |
| !!! | TATTTTCATATTTTAAAAAC+TGG | - | chr7_1:2219413-2219432 | Msa1004630:intron | 10.0% |
| !!! | CAAATAAATCTTTTTTTTTA+AGG | - | chr7_1:2219654-2219673 | Msa1004630:CDS | 10.0% |
| !!! | ATAGAAAGATTTTTTTTTTT+TGG | - | chr7_1:2220456-2220475 | Msa1004630:intron | 10.0% |
| !! | AAATCAATATTTAAAAATCA+GGG | + | chr7_1:2220724-2220743 | None:intergenic | 10.0% |
| !!! | TAAAATATTTTGTTTGAAGA+TGG | - | chr7_1:2218040-2218059 | Msa1004630:intron | 15.0% |
| !! | AAAAATGACTTAAATTCTAA+TGG | + | chr7_1:2218541-2218560 | None:intergenic | 15.0% |
| !!! | TAGAATTTAAGTCATTTTTT+AGG | - | chr7_1:2218542-2218561 | Msa1004630:intron | 15.0% |
| !!! | AGAATTTAAGTCATTTTTTA+GGG | - | chr7_1:2218543-2218562 | Msa1004630:intron | 15.0% |
| !! | GATTATTTATTAAGTCTATA+TGG | + | chr7_1:2218900-2218919 | None:intergenic | 15.0% |
| !!! | TTCTAAAAATATACTTTATC+CGG | - | chr7_1:2219543-2219562 | Msa1004630:intron | 15.0% |
| !! | TAATATACATCAAATACATT+AGG | + | chr7_1:2219612-2219631 | None:intergenic | 15.0% |
| !! | ATTTGAATATGTAATACATT+TGG | + | chr7_1:2219639-2219658 | None:intergenic | 15.0% |
| !!! | TACATATTCTTTGTTTAAAT+TGG | - | chr7_1:2219794-2219813 | Msa1004630:intron | 15.0% |
| !!! | AATATGTTTTCTTTTTTTGA+AGG | + | chr7_1:2219840-2219859 | None:intergenic | 15.0% |
| !! | TGAACTCAATAATTAAAAAT+CGG | + | chr7_1:2220629-2220648 | None:intergenic | 15.0% |
| !! | CAAATCAATATTTAAAAATC+AGG | + | chr7_1:2220725-2220744 | None:intergenic | 15.0% |
| !! | TAATAATAGTTATAACATGA+TGG | + | chr7_1:2221181-2221200 | None:intergenic | 15.0% |
| !! | CTATTATTATAATAATCTAG+TGG | - | chr7_1:2221192-2221211 | Msa1004630:CDS | 15.0% |
| !!! | ATCTTAAATTTTACACCATA+TGG | - | chr7_1:2217550-2217569 | Msa1004630:CDS | 20.0% |
| !!! | TCTTAAATTTTACACCATAT+GGG | - | chr7_1:2217551-2217570 | Msa1004630:CDS | 20.0% |
| !! | TCAAAAGTTACTTAAATTTG+TGG | - | chr7_1:2217765-2217784 | Msa1004630:intron | 20.0% |
| !!! | TTCTCATCATTAATATGTTT+TGG | - | chr7_1:2218214-2218233 | Msa1004630:intron | 20.0% |
| !!! | AGATTTTAATGTTTATTGGA+TGG | + | chr7_1:2218313-2218332 | None:intergenic | 20.0% |
| !!! | TGAGAGATTTTAATGTTTAT+TGG | + | chr7_1:2218317-2218336 | None:intergenic | 20.0% |
| !!! | ATGATTTCTTTTGATTTTGA+CGG | - | chr7_1:2218406-2218425 | Msa1004630:intron | 20.0% |
| !!! | CTTATTTTTAGGACATAAAA+CGG | - | chr7_1:2218610-2218629 | Msa1004630:intron | 20.0% |
| !! | TTTAATTCGTATAGAAGAAA+AGG | + | chr7_1:2218677-2218696 | None:intergenic | 20.0% |
| !! | ATATATGTACATATTGAGTA+AGG | + | chr7_1:2218934-2218953 | None:intergenic | 20.0% |
| !! | CAATCTACATATATATCATA+TGG | - | chr7_1:2218964-2218983 | Msa1004630:intron | 20.0% |
| !! | ATACATTCAGTAAAAATCAA+GGG | + | chr7_1:2219119-2219138 | None:intergenic | 20.0% |
| !! | AATACATTCAGTAAAAATCA+AGG | + | chr7_1:2219120-2219139 | None:intergenic | 20.0% |
| !!! | TGATTTCTGTAGTATATTTT+AGG | - | chr7_1:2219322-2219341 | Msa1004630:intron | 20.0% |
| !!! | TTTTTACTTATAATTGTGAC+CGG | + | chr7_1:2219565-2219584 | None:intergenic | 20.0% |
| !!! | GTTTTACTTATAAATATGAC+TGG | - | chr7_1:2219705-2219724 | Msa1004630:intron | 20.0% |
| !! | CACAAAATTAACAATACTTT+GGG | + | chr7_1:2219909-2219928 | None:intergenic | 20.0% |
| !! | ACACAAAATTAACAATACTT+TGG | + | chr7_1:2219910-2219929 | None:intergenic | 20.0% |
| !!! | CAGCTATATTTTTTTTTTCT+GGG | - | chr7_1:2220005-2220024 | Msa1004630:intron | 20.0% |
| !!! | ATCATAATTTTAATGCAGTT+TGG | - | chr7_1:2220410-2220429 | Msa1004630:intron | 20.0% |
| !! | AACTCAATAATTAAAAATCG+GGG | + | chr7_1:2220627-2220646 | None:intergenic | 20.0% |
| !! | GAACTCAATAATTAAAAATC+GGG | + | chr7_1:2220628-2220647 | None:intergenic | 20.0% |
| !! | ATAGATAAGAAATAATCGTT+TGG | - | chr7_1:2221126-2221145 | Msa1004630:CDS | 20.0% |
| !!! | AGAGGATTCATTGATTTAAT+AGG | + | chr7_1:2217309-2217328 | None:intergenic | 25.0% |
| ! | AAAGACACTGAATTTGTAAA+GGG | + | chr7_1:2217366-2217385 | None:intergenic | 25.0% |
| ! | AATAACAAAGAAGTCAACAA+CGG | - | chr7_1:2217402-2217421 | Msa1004630:three_prime_UTR | 25.0% |
| !!! | AGTAACTTTTGAAATACAGA+TGG | + | chr7_1:2217669-2217688 | None:intergenic | 25.0% |
| ! | CATTTGGCATAATAATATGT+CGG | - | chr7_1:2217863-2217882 | Msa1004630:intron | 25.0% |
| ! | CTTTAGTGATTGAAATTTCA+GGG | + | chr7_1:2217921-2217940 | None:intergenic | 25.0% |
| ! | ACTTTAGTGATTGAAATTTC+AGG | + | chr7_1:2217922-2217941 | None:intergenic | 25.0% |
| ! | ATTTACTTCATCGATAATCA+AGG | - | chr7_1:2217945-2217964 | Msa1004630:intron | 25.0% |
| !!! | TCATCATTAATATGTTTTGG+TGG | - | chr7_1:2218217-2218236 | Msa1004630:intron | 25.0% |
| !!! | CATCATTAATATGTTTTGGT+GGG | - | chr7_1:2218218-2218237 | Msa1004630:intron | 25.0% |
| ! | TTAATGTTTATTGGATGGAA+GGG | + | chr7_1:2218308-2218327 | None:intergenic | 25.0% |
| ! | TTTAATGTTTATTGGATGGA+AGG | + | chr7_1:2218309-2218328 | None:intergenic | 25.0% |
| ! | CATAAAACATGTCTAATGAT+AGG | - | chr7_1:2218335-2218354 | Msa1004630:CDS | 25.0% |
| ! | TATACGAATTAAACCTAATG+AGG | - | chr7_1:2218684-2218703 | Msa1004630:intron | 25.0% |
| !! | GATTAAAGCTTTTCTTTCTA+AGG | - | chr7_1:2218771-2218790 | Msa1004630:intron | 25.0% |
| ! | CAATACTGAAGAACTAATTA+TGG | - | chr7_1:2219268-2219287 | Msa1004630:intron | 25.0% |
| !! | ATAAGTATTTGCCTGAATTT+TGG | + | chr7_1:2219761-2219780 | None:intergenic | 25.0% |
| !! | ATTGTTAATTTTGTGTCAAC+TGG | - | chr7_1:2219914-2219933 | Msa1004630:intron | 25.0% |
| ! | CCAGAAAAAAAAAATATAGC+TGG | + | chr7_1:2220007-2220026 | None:intergenic | 25.0% |
| !!! | CCAGCTATATTTTTTTTTTC+TGG | - | chr7_1:2220004-2220023 | Msa1004630:intron | 25.0% |
| ! | GGAAGTAAAAATAGTTAGAA+TGG | + | chr7_1:2220127-2220146 | None:intergenic | 25.0% |
| !!! | GAAATTGCTTTAAAACTCAA+TGG | - | chr7_1:2220341-2220360 | Msa1004630:intron | 25.0% |
| ! | TTATTTGTCATCAAGTTCAA+CGG | - | chr7_1:2220581-2220600 | Msa1004630:intron | 25.0% |
| !!! | TGTTGTTTCTAAAATGAACT+TGG | + | chr7_1:2220763-2220782 | None:intergenic | 25.0% |
| ! | CTCATGTTTGTAAAAATATC+TGG | - | chr7_1:2220821-2220840 | Msa1004630:intron | 25.0% |
| !!! | TCTGGTGTTTTTATTATTGT+AGG | - | chr7_1:2220839-2220858 | Msa1004630:intron | 25.0% |
| !!! | TGTTTTTATTATTGTAGGAG+AGG | - | chr7_1:2220844-2220863 | Msa1004630:intron | 25.0% |
| ! | TTTGCAGAAGTTTATAATCT+TGG | - | chr7_1:2220995-2221014 | Msa1004630:intron | 25.0% |
| TAAATCAATGAATCCTCTTG+TGG | - | chr7_1:2217311-2217330 | Msa1004630:three_prime_UTR | 30.0% | |
| CAAAGACACTGAATTTGTAA+AGG | + | chr7_1:2217367-2217386 | None:intergenic | 30.0% | |
| TTACAAATTCAGTGTCTTTG+AGG | - | chr7_1:2217367-2217386 | Msa1004630:three_prime_UTR | 30.0% | |
| TACAAATTCAGTGTCTTTGA+GGG | - | chr7_1:2217368-2217387 | Msa1004630:three_prime_UTR | 30.0% | |
| !!! | AACTTTTGAAATACAGATGG+TGG | + | chr7_1:2217666-2217685 | None:intergenic | 30.0% |
| TTAAATACACATCTAGCACA+AGG | - | chr7_1:2217730-2217749 | Msa1004630:intron | 30.0% | |
| TTTAAATTGTTGCCTCACAA+GGG | + | chr7_1:2217822-2217841 | None:intergenic | 30.0% | |
| ATTTAAATTGTTGCCTCACA+AGG | + | chr7_1:2217823-2217842 | None:intergenic | 30.0% | |
| AATTGTTTGTGCAAGTCATT+TGG | - | chr7_1:2217847-2217866 | Msa1004630:intron | 30.0% | |
| !!! | GGTTGTTTTTGAGATTTTAG+TGG | - | chr7_1:2217966-2217985 | Msa1004630:intron | 30.0% |
| ! | TTTGAAAAATCAGCGCTTTT+AGG | + | chr7_1:2218246-2218265 | None:intergenic | 30.0% |
| !!! | AAAAGCGCTGATTTTTCAAA+TGG | - | chr7_1:2218246-2218265 | Msa1004630:intron | 30.0% |
| ! | ACCTACAACTTTTCCAAATA+AGG | - | chr7_1:2218375-2218394 | Msa1004630:intron | 30.0% |
| ! | CCTACAACTTTTCCAAATAA+GGG | - | chr7_1:2218376-2218395 | Msa1004630:intron | 30.0% |
| ! | CTACAACTTTTCCAAATAAG+GGG | - | chr7_1:2218377-2218396 | Msa1004630:intron | 30.0% |
| ! | AAGACGTTGTTGTTAGTAAT+AGG | + | chr7_1:2218518-2218537 | None:intergenic | 30.0% |
| CGTATAGAAGAAAAGGTTAT+TGG | + | chr7_1:2218670-2218689 | None:intergenic | 30.0% | |
| TGTTAAGAATGATCCTCATT+AGG | + | chr7_1:2218700-2218719 | None:intergenic | 30.0% | |
| ! | TTCTAAGGATCTTGAATATG+TGG | - | chr7_1:2218786-2218805 | Msa1004630:intron | 30.0% |
| ! | TTGAATATGTGGCATTTTTC+AGG | - | chr7_1:2218797-2218816 | Msa1004630:intron | 30.0% |
| AATATGATTGTGCGGTAAAT+TGG | + | chr7_1:2219012-2219031 | None:intergenic | 30.0% | |
| ATTTACCGCACAATCATATT+AGG | - | chr7_1:2219012-2219031 | Msa1004630:intron | 30.0% | |
| AATAATGCTAGTTATCCTGA+TGG | - | chr7_1:2219070-2219089 | Msa1004630:intron | 30.0% | |
| !! | ACTATCATATGCTATTTCGA+AGG | - | chr7_1:2219520-2219539 | Msa1004630:intron | 30.0% |
| CATAAACTCTTCCAAAATTC+AGG | - | chr7_1:2219747-2219766 | Msa1004630:intron | 30.0% | |
| AGGCAAATACTTATGTCAAT+AGG | - | chr7_1:2219767-2219786 | Msa1004630:intron | 30.0% | |
| CATGAAGAAAAAAAGTTCAG+CGG | - | chr7_1:2219882-2219901 | Msa1004630:intron | 30.0% | |
| ATGAAGAAAAAAAGTTCAGC+GGG | - | chr7_1:2219883-2219902 | Msa1004630:intron | 30.0% | |
| CTTCCATTGAATCCTTAATT+AGG | - | chr7_1:2220142-2220161 | Msa1004630:intron | 30.0% | |
| CATCCTAATTAAGGATTCAA+TGG | + | chr7_1:2220148-2220167 | None:intergenic | 30.0% | |
| CATTGAATCCTTAATTAGGA+TGG | - | chr7_1:2220146-2220165 | Msa1004630:intron | 30.0% | |
| ATTGGTTACCATCCTAATTA+AGG | + | chr7_1:2220157-2220176 | None:intergenic | 30.0% | |
| GATCAAATCAATCAACGAAT+TGG | + | chr7_1:2220393-2220412 | None:intergenic | 30.0% | |
| TTTGGTTGAACTGAATTGAA+CGG | - | chr7_1:2220428-2220447 | Msa1004630:intron | 30.0% | |
| ! | AACCAAAAGGTTGATTCAAT+CGG | - | chr7_1:2220495-2220514 | Msa1004630:intron | 30.0% |
| !! | GTGTGATATTTGTGTTGTTT+AGG | - | chr7_1:2220912-2220931 | Msa1004630:intron | 30.0% |
| TTCAATTGTCAACGAGAAAA+TGG | - | chr7_1:2221040-2221059 | Msa1004630:CDS | 30.0% | |
| ! | TGGTGTAATTGGAGATGTTT+TGG | - | chr7_1:2217338-2217357 | Msa1004630:three_prime_UTR | 35.0% |
| TACACCATATGGGTAATTCA+TGG | - | chr7_1:2217561-2217580 | Msa1004630:CDS | 35.0% | |
| ACACCATATGGGTAATTCAT+GGG | - | chr7_1:2217562-2217581 | Msa1004630:CDS | 35.0% | |
| TTTCCCATGAATTACCCATA+TGG | + | chr7_1:2217568-2217587 | None:intergenic | 35.0% | |
| AAAAGTTACTAACGAGCACA+AGG | - | chr7_1:2217679-2217698 | Msa1004630:intron | 35.0% | |
| TTAAATTGTTGCCTCACAAG+GGG | + | chr7_1:2217821-2217840 | None:intergenic | 35.0% | |
| CCAAAATGTAAATTCGCTCT+TGG | + | chr7_1:2217992-2218011 | None:intergenic | 35.0% | |
| ! | CCAAGAGCGAATTTACATTT+TGG | - | chr7_1:2217989-2218008 | Msa1004630:intron | 35.0% |
| !! | AAGAAGTGTCACTCTATCTA+AGG | - | chr7_1:2218272-2218291 | Msa1004630:intron | 35.0% |
| ! | CCCTTATTTGGAAAAGTTGT+AGG | + | chr7_1:2218379-2218398 | None:intergenic | 35.0% |
| ATCATCATACACCCCTTATT+TGG | + | chr7_1:2218391-2218410 | None:intergenic | 35.0% | |
| !!! | TTGATTTTGACGGAAGTGTT+TGG | - | chr7_1:2218416-2218435 | Msa1004630:intron | 35.0% |
| !!! | TGATTTTGACGGAAGTGTTT+GGG | - | chr7_1:2218417-2218436 | Msa1004630:intron | 35.0% |
| !!! | GAAACCCTGTACTTTTTTGT+CGG | - | chr7_1:2218572-2218591 | Msa1004630:intron | 35.0% |
| TATTGGTATTGTCGTATCTG+AGG | + | chr7_1:2218653-2218672 | None:intergenic | 35.0% | |
| AAGAATGACATCACCATAGA+AGG | - | chr7_1:2218731-2218750 | Msa1004630:intron | 35.0% | |
| AGAATGACATCACCATAGAA+GGG | - | chr7_1:2218732-2218751 | Msa1004630:intron | 35.0% | |
| ! | GAAAATTTTGTCCCCTTCTA+TGG | + | chr7_1:2218747-2218766 | None:intergenic | 35.0% |
| CATGACCTAATATGATTGTG+CGG | + | chr7_1:2219020-2219039 | None:intergenic | 35.0% | |
| !! | AGGTCATGGTATTGTTTTGT+TGG | - | chr7_1:2219032-2219051 | Msa1004630:intron | 35.0% |
| !! | CATGGTATTGTTTTGTTGGA+AGG | - | chr7_1:2219036-2219055 | Msa1004630:intron | 35.0% |
| TTGTTCCTTCCACAATTCAA+GGG | + | chr7_1:2219188-2219207 | None:intergenic | 35.0% | |
| TTTGTTCCTTCCACAATTCA+AGG | + | chr7_1:2219189-2219208 | None:intergenic | 35.0% | |
| TAGCTGGTGAGAATAAAGTA+TGG | + | chr7_1:2219991-2220010 | None:intergenic | 35.0% | |
| TAAAACTCAATGGATCCACA+CGG | - | chr7_1:2220351-2220370 | Msa1004630:intron | 35.0% | |
| TTGAACTGAATTGAACGGAT+CGG | - | chr7_1:2220433-2220452 | Msa1004630:intron | 35.0% | |
| CTGATAGAGTTTCAACCAAA+AGG | - | chr7_1:2220482-2220501 | Msa1004630:intron | 35.0% | |
| ! | AACCGATTGAATCAACCTTT+TGG | + | chr7_1:2220500-2220519 | None:intergenic | 35.0% |
| AAAAATCAGGGAGACTTCTT+AGG | + | chr7_1:2220712-2220731 | None:intergenic | 35.0% | |
| CTTATCTATATCGTGCGATA+TGG | + | chr7_1:2221115-2221134 | None:intergenic | 35.0% | |
| ATGAATCCTCTTGTGGTTTG+TGG | - | chr7_1:2217318-2217337 | Msa1004630:three_prime_UTR | 40.0% | |
| ATTACACCACAAACCACAAG+AGG | + | chr7_1:2217327-2217346 | None:intergenic | 40.0% | |
| ! | CTTGTGGTTTGTGGTGTAAT+TGG | - | chr7_1:2217327-2217346 | Msa1004630:three_prime_UTR | 40.0% |
| AACAAAGAAGTCAACAACGG+TGG | - | chr7_1:2217405-2217424 | Msa1004630:three_prime_UTR | 40.0% | |
| AACCAACCAAGAGTTCAAGT+TGG | - | chr7_1:2217453-2217472 | Msa1004630:CDS | 40.0% | |
| ! | GACTCCGACAAAAAAGTACA+GGG | + | chr7_1:2218579-2218598 | None:intergenic | 40.0% |
| ! | AGACTCCGACAAAAAAGTAC+AGG | + | chr7_1:2218580-2218599 | None:intergenic | 40.0% |
| GAATGACATCACCATAGAAG+GGG | - | chr7_1:2218733-2218752 | Msa1004630:intron | 40.0% | |
| !!! | ATGTGGCATTTTTCAGGTGA+TGG | - | chr7_1:2218803-2218822 | Msa1004630:intron | 40.0% |
| GCAGGTATTCCCTCATATTA+GGG | + | chr7_1:2218857-2218876 | None:intergenic | 40.0% | |
| TGCAGGTATTCCCTCATATT+AGG | + | chr7_1:2218858-2218877 | None:intergenic | 40.0% | |
| ATATGAGGGAATACCTGCAT+TGG | - | chr7_1:2218859-2218878 | Msa1004630:intron | 40.0% | |
| ! | GAATACCTGCATTGGTAAGT+AGG | - | chr7_1:2218867-2218886 | Msa1004630:intron | 40.0% |
| AACTTCCTACTTACCAATGC+AGG | + | chr7_1:2218875-2218894 | None:intergenic | 40.0% | |
| CGCACAATCATATTAGGTCA+TGG | - | chr7_1:2219018-2219037 | Msa1004630:intron | 40.0% | |
| ! | ATTTCGCTAGCTTATCCATC+AGG | + | chr7_1:2219088-2219107 | None:intergenic | 40.0% |
| TAAAATAGTCGTGATCCCGT+CGG | - | chr7_1:2219221-2219240 | Msa1004630:intron | 40.0% | |
| ! | CGGTACGTGCACAATTTTAT+TGG | - | chr7_1:2220203-2220222 | Msa1004630:intron | 40.0% |
| !! | GATTCCTCATTTTAACCGTG+TGG | + | chr7_1:2220369-2220388 | None:intergenic | 40.0% |
| TCAGAAAGACTTCTTAGTCG+TGG | + | chr7_1:2220659-2220678 | None:intergenic | 40.0% | |
| AAAGTCCAAGACCAACATCA+GGG | - | chr7_1:2220882-2220901 | Msa1004630:intron | 40.0% | |
| ! | TGTTGTTTAGGCAACCTTGT+AGG | - | chr7_1:2220924-2220943 | Msa1004630:intron | 40.0% |
| GCTAATATAGTGAGCCTACA+AGG | + | chr7_1:2220941-2220960 | None:intergenic | 40.0% | |
| TCACTATATTAGCTCCTGGA+TGG | - | chr7_1:2220948-2220967 | Msa1004630:intron | 40.0% | |
| ! | ATGAAATTTTGTCGCCATCC+AGG | + | chr7_1:2220965-2220984 | None:intergenic | 40.0% |
| TTGAAATAGAGAGCAGCAAC+AGG | + | chr7_1:2221025-2221044 | None:intergenic | 40.0% | |
| TGTCAACGAGAAAATGGTTC+TGG | - | chr7_1:2221046-2221065 | Msa1004630:CDS | 40.0% | |
| ! | GGTTGGTTGACTATCTGAGA+GGG | + | chr7_1:2217441-2217460 | None:intergenic | 45.0% |
| ! | TGGTTGGTTGACTATCTGAG+AGG | + | chr7_1:2217442-2217461 | None:intergenic | 45.0% |
| CACCAACTTGAACTCTTGGT+TGG | + | chr7_1:2217458-2217477 | None:intergenic | 45.0% | |
| !! | CAACCAAGAGTTCAAGTTGG+TGG | - | chr7_1:2217456-2217475 | Msa1004630:CDS | 45.0% |
| TGTCCACCAACTTGAACTCT+TGG | + | chr7_1:2217462-2217481 | None:intergenic | 45.0% | |
| AGGACTCTATACACTCTGGT+TGG | - | chr7_1:2217489-2217508 | Msa1004630:CDS | 45.0% | |
| CGCTAATTAACCGTGGGTAA+AGG | + | chr7_1:2217637-2217656 | None:intergenic | 45.0% | |
| AGTCGTCGCTAATTAACCGT+GGG | + | chr7_1:2217643-2217662 | None:intergenic | 45.0% | |
| !! | TTTGACGGAAGTGTTTGGGA+TGG | - | chr7_1:2218421-2218440 | Msa1004630:intron | 45.0% |
| ! | GTATTGTCGTATCTGAGGCA+GGG | + | chr7_1:2218648-2218667 | None:intergenic | 45.0% |
| !!! | TGGCATTTTTCAGGTGATGG+TGG | - | chr7_1:2218806-2218825 | Msa1004630:intron | 45.0% |
| ATATTAGGGTTGCTAGGGCT+TGG | + | chr7_1:2218843-2218862 | None:intergenic | 45.0% | |
| CCCTCATATTAGGGTTGCTA+GGG | + | chr7_1:2218848-2218867 | None:intergenic | 45.0% | |
| CCCTAGCAACCCTAATATGA+GGG | - | chr7_1:2218845-2218864 | Msa1004630:intron | 45.0% | |
| TCCCTCATATTAGGGTTGCT+AGG | + | chr7_1:2218849-2218868 | None:intergenic | 45.0% | |
| AAAATAGTCGTGATCCCGTC+GGG | - | chr7_1:2219222-2219241 | Msa1004630:intron | 45.0% | |
| CTGAAGCAATTTATCCCGAC+GGG | + | chr7_1:2219239-2219258 | None:intergenic | 45.0% | |
| CCTGAAGCAATTTATCCCGA+CGG | + | chr7_1:2219240-2219259 | None:intergenic | 45.0% | |
| ACCAATATTCCAGCGACTAC+AGG | - | chr7_1:2220171-2220190 | Msa1004630:intron | 45.0% | |
| CCAATATTCCAGCGACTACA+GGG | - | chr7_1:2220172-2220191 | Msa1004630:intron | 45.0% | |
| GGATCCACACGGTTAAAATG+AGG | - | chr7_1:2220362-2220381 | Msa1004630:intron | 45.0% | |
| TCGGGGAAACTTCTTAGTCA+TGG | + | chr7_1:2220610-2220629 | None:intergenic | 45.0% | |
| GAAAGTCCAAGACCAACATC+AGG | - | chr7_1:2220881-2220900 | Msa1004630:intron | 45.0% | |
| ! | TGAATCCCTGATGTTGGTCT+TGG | + | chr7_1:2220890-2220909 | None:intergenic | 45.0% |
| ACACGATGAATCCCTGATGT+TGG | + | chr7_1:2220896-2220915 | None:intergenic | 45.0% | |
| AGGCTCACTATATTAGCTCC+TGG | - | chr7_1:2220944-2220963 | Msa1004630:intron | 45.0% | |
| !! | CAACGAGAAAATGGTTCTGG+TGG | - | chr7_1:2221049-2221068 | Msa1004630:CDS | 45.0% |
| !! | GAGAAAATGGTTCTGGTGGA+AGG | - | chr7_1:2221053-2221072 | Msa1004630:CDS | 45.0% |
| !! | AAAATGGTTCTGGTGGAAGG+AGG | - | chr7_1:2221056-2221075 | Msa1004630:CDS | 45.0% |
| !!! | TAAATTTAATACTTATTTTT+AGG | - | chr7_1:2218599-2218618 | Msa1004630:intron | 5.0% |
| !! | AAGTTGGTGGACATGACCTC+AGG | - | chr7_1:2217469-2217488 | Msa1004630:CDS | 50.0% |
| CCAGAGTGTATAGAGTCCTG+AGG | + | chr7_1:2217488-2217507 | None:intergenic | 50.0% | |
| CCTCAGGACTCTATACACTC+TGG | - | chr7_1:2217485-2217504 | Msa1004630:CDS | 50.0% | |
| ! | GTGGGTAAAGGTGCAGTGTT+GGG | + | chr7_1:2217625-2217644 | None:intergenic | 50.0% |
| CAACACTGCACCTTTACCCA+CGG | - | chr7_1:2217624-2217643 | Msa1004630:CDS | 50.0% | |
| GAGTCGTCGCTAATTAACCG+TGG | + | chr7_1:2217644-2217663 | None:intergenic | 50.0% | |
| TACTAACGAGCACAAGGCTG+TGG | - | chr7_1:2217685-2217704 | Msa1004630:intron | 50.0% | |
| ACTAACGAGCACAAGGCTGT+GGG | - | chr7_1:2217686-2217705 | Msa1004630:intron | 50.0% | |
| !! | GAAGTGTTTGGGATGGTGGA+AGG | - | chr7_1:2218428-2218447 | Msa1004630:intron | 50.0% |
| !! | TTTGGGATGGTGGAAGGCTA+GGG | - | chr7_1:2218434-2218453 | Msa1004630:intron | 50.0% |
| ! | GGTATTGTCGTATCTGAGGC+AGG | + | chr7_1:2218649-2218668 | None:intergenic | 50.0% |
| GCCCTAGCAACCCTAATATG+AGG | - | chr7_1:2218844-2218863 | Msa1004630:intron | 50.0% | |
| ! | AGGTGCCACAATACAAGGGA+GGG | + | chr7_1:2219163-2219182 | None:intergenic | 50.0% |
| !! | GGAGAGGTGCCACAATACAA+GGG | + | chr7_1:2219167-2219186 | None:intergenic | 50.0% |
| CCTTCCACAATTCAAGGGAG+AGG | + | chr7_1:2219183-2219202 | None:intergenic | 50.0% | |
| CCTCTCCCTTGAATTGTGGA+AGG | - | chr7_1:2219180-2219199 | Msa1004630:intron | 50.0% | |
| CCGTCGGGATAAATTGCTTC+AGG | - | chr7_1:2219237-2219256 | Msa1004630:intron | 50.0% | |
| CCCTGTAGTCGCTGGAATAT+TGG | + | chr7_1:2220175-2220194 | None:intergenic | 50.0% | |
| AAAGTTGTCCCTGTAGTCGC+TGG | + | chr7_1:2220183-2220202 | None:intergenic | 50.0% | |
| GCGACTACAGGGACAACTTT+CGG | - | chr7_1:2220183-2220202 | Msa1004630:intron | 50.0% | |
| ! | CGTGGGTAAAGGTGCAGTGT+TGG | + | chr7_1:2217626-2217645 | None:intergenic | 55.0% |
| ! | TCACAAGGGGTGCATGGGAA+AGG | + | chr7_1:2217808-2217827 | None:intergenic | 55.0% |
| TTTCCCATGCACCCCTTGTG+AGG | - | chr7_1:2217807-2217826 | Msa1004630:intron | 55.0% | |
| ! | TTGCCTCACAAGGGGTGCAT+GGG | + | chr7_1:2217813-2217832 | None:intergenic | 55.0% |
| !! | GACGGAAGTGTTTGGGATGG+TGG | - | chr7_1:2218424-2218443 | Msa1004630:intron | 55.0% |
| !! | GTTTGGGATGGTGGAAGGCT+AGG | - | chr7_1:2218433-2218452 | Msa1004630:intron | 55.0% |
| ! | TGCTAGGGCTTGGTCCATCA+GGG | + | chr7_1:2218833-2218852 | None:intergenic | 55.0% |
| ! | TTGCTAGGGCTTGGTCCATC+AGG | + | chr7_1:2218834-2218853 | None:intergenic | 55.0% |
| GACTGCCCTCCCTTGTATTG+TGG | - | chr7_1:2219155-2219174 | Msa1004630:intron | 55.0% | |
| ! | GAGGTGCCACAATACAAGGG+AGG | + | chr7_1:2219164-2219183 | None:intergenic | 55.0% |
| !! | GGGAGAGGTGCCACAATACA+AGG | + | chr7_1:2219168-2219187 | None:intergenic | 55.0% |
| GGCACCTCTCCCTTGAATTG+TGG | - | chr7_1:2219176-2219195 | Msa1004630:intron | 55.0% | |
| ! | GTTGCCTCACAAGGGGTGCA+TGG | + | chr7_1:2217814-2217833 | None:intergenic | 60.0% |
| ! | TATCTGAGGCAGGGCGAGCA+AGG | + | chr7_1:2218639-2218658 | None:intergenic | 60.0% |
| !! | CAGGTGATGGTGGACCCTGA+TGG | - | chr7_1:2218816-2218835 | Msa1004630:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 2217295 | 2221238 | 2217295 | ID=Msa1004630;Name=Msa1004630 |
| chr7_1 | mRNA | 2217295 | 2221238 | 2217295 | ID=Msa1004630-mRNA-1;Parent=Msa1004630;Name=Msa1004630-mRNA-1;_AED=0.09;_eAED=0.09;_QI=8|1|1|1|1|1|4|148|178 |
| chr7_1 | exon | 2217295 | 2217672 | 2217295 | ID=Msa1004630-mRNA-1:exon:876;Parent=Msa1004630-mRNA-1 |
| chr7_1 | exon | 2218329 | 2218369 | 2218329 | ID=Msa1004630-mRNA-1:exon:875;Parent=Msa1004630-mRNA-1 |
| chr7_1 | exon | 2219653 | 2219714 | 2219653 | ID=Msa1004630-mRNA-1:exon:874;Parent=Msa1004630-mRNA-1 |
| chr7_1 | exon | 2221027 | 2221238 | 2221027 | ID=Msa1004630-mRNA-1:exon:873;Parent=Msa1004630-mRNA-1 |
| chr7_1 | five_prime_UTR | 2221231 | 2221238 | 2221231 | ID=Msa1004630-mRNA-1:five_prime_utr;Parent=Msa1004630-mRNA-1 |
| chr7_1 | CDS | 2221027 | 2221230 | 2221027 | ID=Msa1004630-mRNA-1:cds;Parent=Msa1004630-mRNA-1 |
| chr7_1 | CDS | 2219653 | 2219714 | 2219653 | ID=Msa1004630-mRNA-1:cds;Parent=Msa1004630-mRNA-1 |
| chr7_1 | CDS | 2218329 | 2218369 | 2218329 | ID=Msa1004630-mRNA-1:cds;Parent=Msa1004630-mRNA-1 |
| chr7_1 | CDS | 2217443 | 2217672 | 2217443 | ID=Msa1004630-mRNA-1:cds;Parent=Msa1004630-mRNA-1 |
| chr7_1 | three_prime_UTR | 2217295 | 2217442 | 2217295 | ID=Msa1004630-mRNA-1:three_prime_utr;Parent=Msa1004630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
