AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1305970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1305970 MtrunA17_Chr1g0207751 97.706 523 10 1 1 521 36 558 0.0 1058
Msa1305970 MtrunA17_Chr5g0437761 28.143 533 318 18 1 514 7 493 4.49e-52 184
Msa1305970 MtrunA17_Chr3g0114221 27.514 527 327 14 2 514 7 492 5.56e-50 179
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1305970 AT2G15020.1 49.351 539 235 12 1 517 1 523 0.0 528
Msa1305970 AT5G64190.2 25.093 538 337 15 2 516 8 502 1.70e-46 170
Msa1305970 AT5G64190.1 25.093 538 337 15 2 516 7 501 1.71e-46 170
Msa1305970 AT2G40390.1 27.462 528 330 18 2 516 8 495 4.34e-40 152

Find 136 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTAGGAGTGGGAGGAAATT+AGG 0.150832 8_4:+564575 None:intergenic
TCCTTCCCGGGCTCGGGTTT+GGG 0.154770 8_4:-563835 Msa1305970:CDS
GTTTGGGTGGGCCCGGAAAT+TGG 0.177853 8_4:-563819 Msa1305970:CDS
CTCAAAGCAGAGCGAACTTC+TGG 0.228304 8_4:-564710 Msa1305970:CDS
TTCCTTCCCGGGCTCGGGTT+TGG 0.231232 8_4:-563836 Msa1305970:CDS
AAGAAAATGGAGAGGGATTC+TGG 0.256277 8_4:+564434 None:intergenic
GTTGATTTGCCTCTAATTCA+TGG 0.263186 8_4:-563297 Msa1305970:CDS
GTAGGAGTGGGAGGAAATTA+GGG 0.286085 8_4:+564576 None:intergenic
ACATAACTAGCTCCAATTTC+CGG 0.286974 8_4:+563807 None:intergenic
CACCATACAATATGGATATT+TGG 0.297897 8_4:-564841 None:intergenic
GAAATTGAGAAGGTTGTTAA+TGG 0.304105 8_4:-563735 Msa1305970:CDS
GAAAACAAGGTTGAAGAAAA+TGG 0.312483 8_4:+564421 None:intergenic
ATGGTGCATTATAAGAGAAT+TGG 0.313676 8_4:-564201 Msa1305970:CDS
CATTTCTCGGAGATCCAAAT+AGG 0.321681 8_4:+564617 None:intergenic
CTCTGTTTCATGCGCACCCT+TGG 0.328639 8_4:-564239 Msa1305970:CDS
GCTTCCACGAGCCCACTTCT+TGG 0.331509 8_4:+563568 None:intergenic
GTAATAGCAGGGGATGAATA+TGG 0.339074 8_4:-563465 Msa1305970:CDS
CATAACTAGCTCCAATTTCC+GGG 0.345763 8_4:+563808 None:intergenic
ACCGACCCGCTCTTACTAAA+TGG 0.353331 8_4:+563489 None:intergenic
GTGAGTTGGATATGATTTCT+TGG 0.353682 8_4:+564543 None:intergenic
TTATGTGGCAGGCTTGAGTT+TGG 0.357892 8_4:-563790 Msa1305970:CDS
GCCAGTTTCATAGTCATAAC+TGG 0.380966 8_4:+564089 None:intergenic
CGTCTCCATGTGGCGAGGTT+AGG 0.381632 8_4:-563903 Msa1305970:CDS
GCCAGTTATGACTATGAAAC+TGG 0.387517 8_4:-564090 Msa1305970:CDS
TGAAGAGAGTGTGCATTTCT+CGG 0.388125 8_4:+564604 None:intergenic
TTGGGTACATAATAGCAAAA+TGG 0.392593 8_4:-564220 Msa1305970:CDS
GGCTCGGGTTTGGGTGGGCC+CGG 0.397924 8_4:-563826 Msa1305970:CDS
CTAGCAAGTTCGAACTTCAT+TGG 0.398302 8_4:+564767 None:intergenic
TGGTGCATTATAAGAGAATT+GGG 0.410752 8_4:-564200 Msa1305970:CDS
ATGAAACTGGCGCGAAACTA+CGG 0.423192 8_4:-564077 Msa1305970:CDS
ATATGATTTCTTGGAGGAGT+TGG 0.425448 8_4:+564552 None:intergenic
GTGTGTTGAAGTGGAGGATA+GGG 0.426343 8_4:-563401 Msa1305970:CDS
ATGATCCATGCTATGGGCTC+TGG 0.428592 8_4:+564470 None:intergenic
AGTGTGTTGAAGTGGAGGAT+AGG 0.432586 8_4:-563402 Msa1305970:CDS
GGCCCACCCAAACCCGAGCC+CGG 0.433858 8_4:+563829 None:intergenic
ACGGGTGATGACCCGATTCA+TGG 0.434000 8_4:-563543 Msa1305970:CDS
TATGTGGCAGGCTTGAGTTT+GGG 0.448486 8_4:-563789 Msa1305970:CDS
GATGAATATGGAGAAGAAGT+AGG 0.452069 8_4:-563453 Msa1305970:CDS
CTTGAGTTTGGGTCGGTCTA+CGG 0.453754 8_4:-563778 Msa1305970:CDS
CTCATTCCACTCTACTGAGC+TGG 0.458461 8_4:+564799 None:intergenic
GGAGGAGTTGGAGTAGGAGT+GGG 0.460854 8_4:+564564 None:intergenic
GACAACGCAGTTTCGAGAAC+CGG 0.463504 8_4:+564320 None:intergenic
TCTGTTTCATGCGCACCCTT+GGG 0.465524 8_4:-564238 Msa1305970:CDS
TACCTGCCTGACCAAGCAAA+AGG 0.472557 8_4:-563360 Msa1305970:CDS
TGGAGGAGTTGGAGTAGGAG+TGG 0.474177 8_4:+564563 None:intergenic
TCCCGGGCTCGGGTTTGGGT+GGG 0.474749 8_4:-563831 Msa1305970:CDS
TGAAACTGGCGCGAAACTAC+GGG 0.475994 8_4:-564076 Msa1305970:CDS
AGCGGGTCGGTTGTAATAGC+AGG 0.479382 8_4:-563477 Msa1305970:CDS
ACCTTCATGGTATTCTTACA+AGG 0.479621 8_4:-564665 Msa1305970:CDS
ATGCTAAGGAGTCAATAATC+AGG 0.479874 8_4:-564028 Msa1305970:CDS
CGGTCTAGCTCACCACCAAT+TGG 0.481424 8_4:-564003 Msa1305970:CDS
TCCGTGGCGTAAGAGAATTT+CGG 0.482234 8_4:+564146 None:intergenic
ATGACCCGATTCATGGGTTG+AGG 0.484185 8_4:-563536 Msa1305970:CDS
CGAGTCTATGATCCATGCTA+TGG 0.484977 8_4:+564463 None:intergenic
GAGAACAAAGAGTTGGAGAA+TGG 0.487193 8_4:-563652 Msa1305970:CDS
TTCCCGGGCTCGGGTTTGGG+TGG 0.488666 8_4:-563832 Msa1305970:CDS
TTTCTTGGAGGAGTTGGAGT+AGG 0.492223 8_4:+564558 None:intergenic
TGTGTTGAAGTGGAGGATAG+GGG 0.494047 8_4:-563400 Msa1305970:CDS
TCAAAGCAGAGCGAACTTCT+GGG 0.497368 8_4:-564709 Msa1305970:CDS
AAGCTTCAGCGAAGTCTTCG+AGG 0.497840 8_4:-563680 Msa1305970:CDS
GTGGAGGTTAAGTAAAGAGA+TGG 0.497916 8_4:-563430 Msa1305970:CDS
TTTCCACTCGTTACTTGCTC+CGG 0.502153 8_4:-564339 Msa1305970:CDS
ACCCAAACCCGAGCCCGGGA+AGG 0.505885 8_4:+563834 None:intergenic
ATTTCAAGGTATTGATGCTA+AGG 0.506261 8_4:-564042 Msa1305970:CDS
ATGAATATGGAGAAGAAGTA+GGG 0.506264 8_4:-563452 Msa1305970:CDS
GGGCAAAACGGTAAATTTCA+AGG 0.509959 8_4:-564056 Msa1305970:CDS
ACTGCACGTGTGCTTCCAAT+TGG 0.511898 8_4:+563988 None:intergenic
TGGAAGGGAGTGTGTTGAAG+TGG 0.512738 8_4:-563410 Msa1305970:CDS
AGAAGCACTAGTAACCTTCA+TGG 0.513303 8_4:-564678 Msa1305970:CDS
ATTATAAGAGAATTGGGTGT+AGG 0.514599 8_4:-564194 Msa1305970:CDS
GCCCACCCAAACCCGAGCCC+GGG 0.519196 8_4:+563830 None:intergenic
GGAGAATGAGAACAAAGAGT+TGG 0.522842 8_4:-563659 Msa1305970:CDS
AGTGGGCTCGTGGAAGCCTA+CGG 0.523175 8_4:-563562 Msa1305970:CDS
CGGGCCAAGAAGTGGGCTCG+TGG 0.526068 8_4:-563572 Msa1305970:CDS
CGAGAAATCAGATATTTCAA+AGG 0.531598 8_4:-563706 Msa1305970:CDS
GGTTAAGTAAAGAGATGGAA+GGG 0.532562 8_4:-563425 Msa1305970:CDS
ATTGGAGCTAGTTATGTGGC+AGG 0.533692 8_4:-563801 Msa1305970:CDS
AAGTTCGAACTTGCTAGAGA+TGG 0.535314 8_4:-564761 Msa1305970:CDS
TCATTCCACTCTACTGAGCT+GGG 0.537296 8_4:+564800 None:intergenic
GTGGGCTCGTGGAAGCCTAC+GGG 0.538592 8_4:-563561 Msa1305970:CDS
CGGGTGATGACCCGATTCAT+GGG 0.539719 8_4:-563542 Msa1305970:CDS
GGAGTTGGAGTAGGAGTGGG+AGG 0.540122 8_4:+564567 None:intergenic
ATGGAGAAGAAGTAGGGTGG+AGG 0.540386 8_4:-563446 Msa1305970:CDS
GTGTTGAAGTGGAGGATAGG+GGG 0.541041 8_4:-563399 Msa1305970:CDS
GCGCGAAACTACGGGCAAAA+CGG 0.542584 8_4:-564068 Msa1305970:CDS
GACCCGATTCATGGGTTGAG+GGG 0.549347 8_4:-563534 Msa1305970:CDS
ATTGGAAGCACACGTGCAGT+TGG 0.551697 8_4:-563985 Msa1305970:CDS
TAATATGACGGGCCAAGAAG+TGG 0.553598 8_4:-563580 Msa1305970:CDS
ATCGTGTGCTGTGGGTGAGT+TGG 0.557028 8_4:+564529 None:intergenic
AATATGGAGAAGAAGTAGGG+TGG 0.557252 8_4:-563449 Msa1305970:CDS
TGGCAGGCTTGAGTTTGGGT+CGG 0.560008 8_4:-563785 Msa1305970:CDS
ACCTGCCTGACCAAGCAAAA+GGG 0.564399 8_4:-563359 Msa1305970:CDS
TACACCTACGGTAATAAAGA+AGG 0.566525 8_4:+564271 None:intergenic
GGAGAATAATGAAAGAGAAG+TGG 0.566557 8_4:-563757 Msa1305970:CDS
ATAGACCATTTAGTAAGAGC+GGG 0.569119 8_4:-563494 Msa1305970:CDS
AACTCCCCAGCTCAGTAGAG+TGG 0.570068 8_4:-564805 Msa1305970:CDS
TAAGAGAATTTCGGATTCGA+AGG 0.571957 8_4:+564155 None:intergenic
GTGCAGTTGGAATATACAGT+TGG 0.573238 8_4:-563972 Msa1305970:CDS
TGACCCGATTCATGGGTTGA+GGG 0.575454 8_4:-563535 Msa1305970:CDS
AGTTGGATATGATTTCTTGG+AGG 0.577043 8_4:+564546 None:intergenic
AGGTTAAGTAAAGAGATGGA+AGG 0.577773 8_4:-563426 Msa1305970:CDS
ACAATATGGATATTTGGTCA+TGG 0.577891 8_4:-564835 None:intergenic
AAGAGAAGTGGAAATTGAGA+AGG 0.580891 8_4:-563745 Msa1305970:CDS
GCACGTGTGCTTCCAATTGG+TGG 0.586502 8_4:+563991 None:intergenic
TCTTACGCCACGGAGTCTCA+AGG 0.587357 8_4:-564137 Msa1305970:CDS
GAGTCTATGATCCATGCTAT+GGG 0.587822 8_4:+564464 None:intergenic
AATATGACGGGCCAAGAAGT+GGG 0.587989 8_4:-563579 Msa1305970:CDS
GCGGGTCGGTTGTAATAGCA+GGG 0.593458 8_4:-563476 Msa1305970:CDS
GCAAGTGCTATCGTGTGCTG+TGG 0.594345 8_4:+564520 None:intergenic
AGAACCTTCTTTATTACCGT+AGG 0.595571 8_4:-564275 Msa1305970:CDS
ACCCGATTCATGGGTTGAGG+GGG 0.596908 8_4:-563533 Msa1305970:CDS
GAATGGATCAAGACGCGGAG+GGG 0.597718 8_4:-563635 Msa1305970:CDS
GAGTTCAGTGTCTACACCTA+CGG 0.599835 8_4:+564259 None:intergenic
AAGGTTGAAGAAAATGGAGA+GGG 0.609805 8_4:+564427 None:intergenic
TCAAACCAGAGCCCATAGCA+TGG 0.613481 8_4:-564475 Msa1305970:CDS
AAGGAGTCAATAATCAGGTA+CGG 0.618007 8_4:-564023 Msa1305970:CDS
CAAGGTTGAAGAAAATGGAG+AGG 0.624633 8_4:+564426 None:intergenic
TCCGAAATTCTCTTACGCCA+CGG 0.629660 8_4:-564147 Msa1305970:CDS
GCCTTGTAAGAATACCATGA+AGG 0.630625 8_4:+564664 None:intergenic
TAAAACCTAACCTCGCCACA+TGG 0.634156 8_4:+563898 None:intergenic
AATAGACCATTTAGTAAGAG+CGG 0.634830 8_4:-563495 Msa1305970:CDS
AAGGGAGTGTGTTGAAGTGG+AGG 0.645267 8_4:-563407 Msa1305970:CDS
ACCATTTAGTAAGAGCGGGT+CGG 0.645800 8_4:-563490 Msa1305970:CDS
GGAAATTGGAGCTAGTTATG+TGG 0.646603 8_4:-563805 Msa1305970:CDS
GAACCGGAGCAAGTAACGAG+TGG 0.649394 8_4:+564336 None:intergenic
GAGAATGGATCAAGACGCGG+AGG 0.650927 8_4:-563637 Msa1305970:CDS
AGAGACGAATGGTGAAAACA+AGG 0.653167 8_4:+564408 None:intergenic
CAAGTGCTATCGTGTGCTGT+GGG 0.657065 8_4:+564521 None:intergenic
GCATAGCCAAAAGAGACGAA+TGG 0.660735 8_4:+564397 None:intergenic
AGAATGGATCAAGACGCGGA+GGG 0.664709 8_4:-563636 Msa1305970:CDS
CATTCCACTCTACTGAGCTG+GGG 0.683835 8_4:+564801 None:intergenic
TTGAAACTAGATGTATTGAG+TGG 0.685420 8_4:-563329 Msa1305970:CDS
TGAATCGGGTCATCACCCGT+AGG 0.692591 8_4:+563546 None:intergenic
TGATAATATACGTCTCCATG+TGG 0.695983 8_4:-563913 Msa1305970:CDS
ATATACGTCTCCATGTGGCG+AGG 0.705067 8_4:-563908 Msa1305970:CDS
TTGGAGAATGGATCAAGACG+CGG 0.707631 8_4:-563640 Msa1305970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATACAGTTGGATTTTATGA+TGG - chr8_4:564154-564173 Msa1305970:CDS 25.0%
!!! ATTTTATGATGGATTCATTC+AGG - chr8_4:564165-564184 Msa1305970:CDS 25.0%
!! TGTTTTGCATGATAATATGA+CGG - chr8_4:564522-564541 Msa1305970:CDS 25.0%
!! AGTAATTTTCCATGAATTAG+AGG + chr8_4:564829-564848 None:intergenic 25.0%
!! TATACAGTTGGATTTTATGA+TGG - chr8_4:564154-564173 Msa1305970:CDS 25.0%
!!! ATTTTATGATGGATTCATTC+AGG - chr8_4:564165-564184 Msa1305970:CDS 25.0%
!! TGTTTTGCATGATAATATGA+CGG - chr8_4:564522-564541 Msa1305970:CDS 25.0%
!! AGTAATTTTCCATGAATTAG+AGG + chr8_4:564829-564848 None:intergenic 25.0%
GAAAACAAGGTTGAAGAAAA+TGG + chr8_4:563696-563715 None:intergenic 30.0%
!!! TTTTGCTATTATGTACCCAA+GGG + chr8_4:563894-563913 None:intergenic 30.0%
!!! ATTTTGCTATTATGTACCCA+AGG + chr8_4:563895-563914 None:intergenic 30.0%
TTGGGTACATAATAGCAAAA+TGG - chr8_4:563894-563913 Msa1305970:CDS 30.0%
ATGGTGCATTATAAGAGAAT+TGG - chr8_4:563913-563932 Msa1305970:CDS 30.0%
TGGTGCATTATAAGAGAATT+GGG - chr8_4:563914-563933 Msa1305970:CDS 30.0%
ATTATAAGAGAATTGGGTGT+AGG - chr8_4:563920-563939 Msa1305970:CDS 30.0%
!! ATTTCAAGGTATTGATGCTA+AGG - chr8_4:564072-564091 Msa1305970:CDS 30.0%
!! TTTTAAACATGGTGATGATG+TGG - chr8_4:564234-564253 Msa1305970:CDS 30.0%
GAAATTGAGAAGGTTGTTAA+TGG - chr8_4:564379-564398 Msa1305970:CDS 30.0%
CGAGAAATCAGATATTTCAA+AGG - chr8_4:564408-564427 Msa1305970:CDS 30.0%
! GTTTTGCATGATAATATGAC+GGG - chr8_4:564523-564542 Msa1305970:CDS 30.0%
AATAGACCATTTAGTAAGAG+CGG - chr8_4:564619-564638 Msa1305970:CDS 30.0%
ATGAATATGGAGAAGAAGTA+GGG - chr8_4:564662-564681 Msa1305970:CDS 30.0%
TTGAAACTAGATGTATTGAG+TGG - chr8_4:564785-564804 Msa1305970:CDS 30.0%
GAAAACAAGGTTGAAGAAAA+TGG + chr8_4:563696-563715 None:intergenic 30.0%
!!! TTTTGCTATTATGTACCCAA+GGG + chr8_4:563894-563913 None:intergenic 30.0%
!!! ATTTTGCTATTATGTACCCA+AGG + chr8_4:563895-563914 None:intergenic 30.0%
TTGGGTACATAATAGCAAAA+TGG - chr8_4:563894-563913 Msa1305970:CDS 30.0%
ATGGTGCATTATAAGAGAAT+TGG - chr8_4:563913-563932 Msa1305970:CDS 30.0%
TGGTGCATTATAAGAGAATT+GGG - chr8_4:563914-563933 Msa1305970:CDS 30.0%
ATTATAAGAGAATTGGGTGT+AGG - chr8_4:563920-563939 Msa1305970:CDS 30.0%
!! ATTTCAAGGTATTGATGCTA+AGG - chr8_4:564072-564091 Msa1305970:CDS 30.0%
!! TTTTAAACATGGTGATGATG+TGG - chr8_4:564234-564253 Msa1305970:CDS 30.0%
GAAATTGAGAAGGTTGTTAA+TGG - chr8_4:564379-564398 Msa1305970:CDS 30.0%
CGAGAAATCAGATATTTCAA+AGG - chr8_4:564408-564427 Msa1305970:CDS 30.0%
! GTTTTGCATGATAATATGAC+GGG - chr8_4:564523-564542 Msa1305970:CDS 30.0%
AATAGACCATTTAGTAAGAG+CGG - chr8_4:564619-564638 Msa1305970:CDS 30.0%
ATGAATATGGAGAAGAAGTA+GGG - chr8_4:564662-564681 Msa1305970:CDS 30.0%
TTGAAACTAGATGTATTGAG+TGG - chr8_4:564785-564804 Msa1305970:CDS 30.0%
ACCTTCATGGTATTCTTACA+AGG - chr8_4:563449-563468 Msa1305970:CDS 35.0%
!!! ATAGGTTTTTGGGTGTTGAA+TGG + chr8_4:563482-563501 None:intergenic 35.0%
TCAACACCCAAAAACCTATT+TGG - chr8_4:563483-563502 Msa1305970:CDS 35.0%
! GGAGATCCAAATAGGTTTTT+GGG + chr8_4:563492-563511 None:intergenic 35.0%
ATATGATTTCTTGGAGGAGT+TGG + chr8_4:563565-563584 None:intergenic 35.0%
AGTTGGATATGATTTCTTGG+AGG + chr8_4:563571-563590 None:intergenic 35.0%
! GTGAGTTGGATATGATTTCT+TGG + chr8_4:563574-563593 None:intergenic 35.0%
!!! TGGTTTGAGTTTTTGAAGCT+GGG + chr8_4:563627-563646 None:intergenic 35.0%
AAGGTTGAAGAAAATGGAGA+GGG + chr8_4:563690-563709 None:intergenic 35.0%
! TTTTCACCATTCGTCTCTTT+TGG - chr8_4:563711-563730 Msa1305970:CDS 35.0%
AGAACCTTCTTTATTACCGT+AGG - chr8_4:563839-563858 Msa1305970:CDS 35.0%
TACACCTACGGTAATAAAGA+AGG + chr8_4:563846-563865 None:intergenic 35.0%
TAAGAGAATTTCGGATTCGA+AGG + chr8_4:563962-563981 None:intergenic 35.0%
!! CAAGGTTTTTGGATTCTGAA+AGG - chr8_4:563995-564014 Msa1305970:CDS 35.0%
ATGCTAAGGAGTCAATAATC+AGG - chr8_4:564086-564105 Msa1305970:CDS 35.0%
AAGGAGTCAATAATCAGGTA+CGG - chr8_4:564091-564110 Msa1305970:CDS 35.0%
TGATAATATACGTCTCCATG+TGG - chr8_4:564201-564220 Msa1305970:CDS 35.0%
ACATAACTAGCTCCAATTTC+CGG + chr8_4:564310-564329 None:intergenic 35.0%
GGAGAATAATGAAAGAGAAG+TGG - chr8_4:564357-564376 Msa1305970:CDS 35.0%
AAGAGAAGTGGAAATTGAGA+AGG - chr8_4:564369-564388 Msa1305970:CDS 35.0%
ATAGACCATTTAGTAAGAGC+GGG - chr8_4:564620-564639 Msa1305970:CDS 35.0%
GATGAATATGGAGAAGAAGT+AGG - chr8_4:564661-564680 Msa1305970:CDS 35.0%
AGGTTAAGTAAAGAGATGGA+AGG - chr8_4:564688-564707 Msa1305970:CDS 35.0%
GGTTAAGTAAAGAGATGGAA+GGG - chr8_4:564689-564708 Msa1305970:CDS 35.0%
!! GTTGATTTGCCTCTAATTCA+TGG - chr8_4:564817-564836 Msa1305970:CDS 35.0%
ACCTTCATGGTATTCTTACA+AGG - chr8_4:563449-563468 Msa1305970:CDS 35.0%
!!! ATAGGTTTTTGGGTGTTGAA+TGG + chr8_4:563482-563501 None:intergenic 35.0%
TCAACACCCAAAAACCTATT+TGG - chr8_4:563483-563502 Msa1305970:CDS 35.0%
! GGAGATCCAAATAGGTTTTT+GGG + chr8_4:563492-563511 None:intergenic 35.0%
ATATGATTTCTTGGAGGAGT+TGG + chr8_4:563565-563584 None:intergenic 35.0%
AGTTGGATATGATTTCTTGG+AGG + chr8_4:563571-563590 None:intergenic 35.0%
! GTGAGTTGGATATGATTTCT+TGG + chr8_4:563574-563593 None:intergenic 35.0%
!!! TGGTTTGAGTTTTTGAAGCT+GGG + chr8_4:563627-563646 None:intergenic 35.0%
AAGGTTGAAGAAAATGGAGA+GGG + chr8_4:563690-563709 None:intergenic 35.0%
! TTTTCACCATTCGTCTCTTT+TGG - chr8_4:563711-563730 Msa1305970:CDS 35.0%
AGAACCTTCTTTATTACCGT+AGG - chr8_4:563839-563858 Msa1305970:CDS 35.0%
TACACCTACGGTAATAAAGA+AGG + chr8_4:563846-563865 None:intergenic 35.0%
TAAGAGAATTTCGGATTCGA+AGG + chr8_4:563962-563981 None:intergenic 35.0%
!! CAAGGTTTTTGGATTCTGAA+AGG - chr8_4:563995-564014 Msa1305970:CDS 35.0%
ATGCTAAGGAGTCAATAATC+AGG - chr8_4:564086-564105 Msa1305970:CDS 35.0%
AAGGAGTCAATAATCAGGTA+CGG - chr8_4:564091-564110 Msa1305970:CDS 35.0%
TGATAATATACGTCTCCATG+TGG - chr8_4:564201-564220 Msa1305970:CDS 35.0%
ACATAACTAGCTCCAATTTC+CGG + chr8_4:564310-564329 None:intergenic 35.0%
GGAGAATAATGAAAGAGAAG+TGG - chr8_4:564357-564376 Msa1305970:CDS 35.0%
AAGAGAAGTGGAAATTGAGA+AGG - chr8_4:564369-564388 Msa1305970:CDS 35.0%
ATAGACCATTTAGTAAGAGC+GGG - chr8_4:564620-564639 Msa1305970:CDS 35.0%
GATGAATATGGAGAAGAAGT+AGG - chr8_4:564661-564680 Msa1305970:CDS 35.0%
AGGTTAAGTAAAGAGATGGA+AGG - chr8_4:564688-564707 Msa1305970:CDS 35.0%
GGTTAAGTAAAGAGATGGAA+GGG - chr8_4:564689-564708 Msa1305970:CDS 35.0%
!! GTTGATTTGCCTCTAATTCA+TGG - chr8_4:564817-564836 Msa1305970:CDS 35.0%
CTAGCAAGTTCGAACTTCAT+TGG + chr8_4:563350-563369 None:intergenic 40.0%
!! AAGTTCGAACTTGCTAGAGA+TGG - chr8_4:563353-563372 Msa1305970:CDS 40.0%
!! AGAAGCACTAGTAACCTTCA+TGG - chr8_4:563436-563455 Msa1305970:CDS 40.0%
GCCTTGTAAGAATACCATGA+AGG + chr8_4:563453-563472 None:intergenic 40.0%
! CGGAGATCCAAATAGGTTTT+TGG + chr8_4:563493-563512 None:intergenic 40.0%
CATTTCTCGGAGATCCAAAT+AGG + chr8_4:563500-563519 None:intergenic 40.0%
! TGAAGAGAGTGTGCATTTCT+CGG + chr8_4:563513-563532 None:intergenic 40.0%
!!! GTTTTTGAAGCTGGGATCTA+GGG + chr8_4:563619-563638 None:intergenic 40.0%
!!! AGTTTTTGAAGCTGGGATCT+AGG + chr8_4:563620-563639 None:intergenic 40.0%
!!! CTGGTTTGAGTTTTTGAAGC+TGG + chr8_4:563628-563647 None:intergenic 40.0%
GAGTCTATGATCCATGCTAT+GGG + chr8_4:563653-563672 None:intergenic 40.0%
AAGAAAATGGAGAGGGATTC+TGG + chr8_4:563683-563702 None:intergenic 40.0%
CAAGGTTGAAGAAAATGGAG+AGG + chr8_4:563691-563710 None:intergenic 40.0%
AGAGACGAATGGTGAAAACA+AGG + chr8_4:563709-563728 None:intergenic 40.0%
GCCAGTTATGACTATGAAAC+TGG - chr8_4:564024-564043 Msa1305970:CDS 40.0%
GCCAGTTTCATAGTCATAAC+TGG + chr8_4:564028-564047 None:intergenic 40.0%
GGGCAAAACGGTAAATTTCA+AGG - chr8_4:564058-564077 Msa1305970:CDS 40.0%
GTGCAGTTGGAATATACAGT+TGG - chr8_4:564142-564161 Msa1305970:CDS 40.0%
!!! GCGAGGTTAGGTTTTAAACA+TGG - chr8_4:564223-564242 Msa1305970:CDS 40.0%
! ACGAGAAACATTTTCCTTCC+CGG - chr8_4:564266-564285 Msa1305970:CDS 40.0%
CATAACTAGCTCCAATTTCC+GGG + chr8_4:564309-564328 None:intergenic 40.0%
GGAAATTGGAGCTAGTTATG+TGG - chr8_4:564309-564328 Msa1305970:CDS 40.0%
GGAGAATGAGAACAAAGAGT+TGG - chr8_4:564455-564474 Msa1305970:CDS 40.0%
GAGAACAAAGAGTTGGAGAA+TGG - chr8_4:564462-564481 Msa1305970:CDS 40.0%
GTAATAGCAGGGGATGAATA+TGG - chr8_4:564649-564668 Msa1305970:CDS 40.0%
AATATGGAGAAGAAGTAGGG+TGG - chr8_4:564665-564684 Msa1305970:CDS 40.0%
GTGGAGGTTAAGTAAAGAGA+TGG - chr8_4:564684-564703 Msa1305970:CDS 40.0%
! CAAAATGACTCCCTTTTGCT+TGG + chr8_4:564768-564787 None:intergenic 40.0%
CTAGCAAGTTCGAACTTCAT+TGG + chr8_4:563350-563369 None:intergenic 40.0%
!! AAGTTCGAACTTGCTAGAGA+TGG - chr8_4:563353-563372 Msa1305970:CDS 40.0%
!! AGAAGCACTAGTAACCTTCA+TGG - chr8_4:563436-563455 Msa1305970:CDS 40.0%
GCCTTGTAAGAATACCATGA+AGG + chr8_4:563453-563472 None:intergenic 40.0%
! CGGAGATCCAAATAGGTTTT+TGG + chr8_4:563493-563512 None:intergenic 40.0%
CATTTCTCGGAGATCCAAAT+AGG + chr8_4:563500-563519 None:intergenic 40.0%
! TGAAGAGAGTGTGCATTTCT+CGG + chr8_4:563513-563532 None:intergenic 40.0%
!!! GTTTTTGAAGCTGGGATCTA+GGG + chr8_4:563619-563638 None:intergenic 40.0%
!!! AGTTTTTGAAGCTGGGATCT+AGG + chr8_4:563620-563639 None:intergenic 40.0%
!!! CTGGTTTGAGTTTTTGAAGC+TGG + chr8_4:563628-563647 None:intergenic 40.0%
GAGTCTATGATCCATGCTAT+GGG + chr8_4:563653-563672 None:intergenic 40.0%
AAGAAAATGGAGAGGGATTC+TGG + chr8_4:563683-563702 None:intergenic 40.0%
CAAGGTTGAAGAAAATGGAG+AGG + chr8_4:563691-563710 None:intergenic 40.0%
AGAGACGAATGGTGAAAACA+AGG + chr8_4:563709-563728 None:intergenic 40.0%
GCCAGTTATGACTATGAAAC+TGG - chr8_4:564024-564043 Msa1305970:CDS 40.0%
GCCAGTTTCATAGTCATAAC+TGG + chr8_4:564028-564047 None:intergenic 40.0%
GGGCAAAACGGTAAATTTCA+AGG - chr8_4:564058-564077 Msa1305970:CDS 40.0%
GTGCAGTTGGAATATACAGT+TGG - chr8_4:564142-564161 Msa1305970:CDS 40.0%
!!! GCGAGGTTAGGTTTTAAACA+TGG - chr8_4:564223-564242 Msa1305970:CDS 40.0%
! ACGAGAAACATTTTCCTTCC+CGG - chr8_4:564266-564285 Msa1305970:CDS 40.0%
CATAACTAGCTCCAATTTCC+GGG + chr8_4:564309-564328 None:intergenic 40.0%
GGAAATTGGAGCTAGTTATG+TGG - chr8_4:564309-564328 Msa1305970:CDS 40.0%
GGAGAATGAGAACAAAGAGT+TGG - chr8_4:564455-564474 Msa1305970:CDS 40.0%
GAGAACAAAGAGTTGGAGAA+TGG - chr8_4:564462-564481 Msa1305970:CDS 40.0%
GTAATAGCAGGGGATGAATA+TGG - chr8_4:564649-564668 Msa1305970:CDS 40.0%
AATATGGAGAAGAAGTAGGG+TGG - chr8_4:564665-564684 Msa1305970:CDS 40.0%
GTGGAGGTTAAGTAAAGAGA+TGG - chr8_4:564684-564703 Msa1305970:CDS 40.0%
! CAAAATGACTCCCTTTTGCT+TGG + chr8_4:564768-564787 None:intergenic 40.0%
TCATTCCACTCTACTGAGCT+GGG + chr8_4:563317-563336 None:intergenic 45.0%
TCAAAGCAGAGCGAACTTCT+GGG - chr8_4:563405-563424 Msa1305970:CDS 45.0%
GTAGGAGTGGGAGGAAATTA+GGG + chr8_4:563541-563560 None:intergenic 45.0%
AGTAGGAGTGGGAGGAAATT+AGG + chr8_4:563542-563561 None:intergenic 45.0%
TTTCTTGGAGGAGTTGGAGT+AGG + chr8_4:563559-563578 None:intergenic 45.0%
CGAGTCTATGATCCATGCTA+TGG + chr8_4:563654-563673 None:intergenic 45.0%
GCATAGCCAAAAGAGACGAA+TGG + chr8_4:563720-563739 None:intergenic 45.0%
TTTCCACTCGTTACTTGCTC+CGG - chr8_4:563775-563794 Msa1305970:CDS 45.0%
GAGTTCAGTGTCTACACCTA+CGG + chr8_4:563858-563877 None:intergenic 45.0%
TCCGAAATTCTCTTACGCCA+CGG - chr8_4:563967-563986 Msa1305970:CDS 45.0%
TCCGTGGCGTAAGAGAATTT+CGG + chr8_4:563971-563990 None:intergenic 45.0%
ATGAAACTGGCGCGAAACTA+CGG - chr8_4:564037-564056 Msa1305970:CDS 45.0%
TAAAACCTAACCTCGCCACA+TGG + chr8_4:564219-564238 None:intergenic 45.0%
! CGAGAAACATTTTCCTTCCC+GGG - chr8_4:564267-564286 Msa1305970:CDS 45.0%
ATTGGAGCTAGTTATGTGGC+AGG - chr8_4:564313-564332 Msa1305970:CDS 45.0%
TTATGTGGCAGGCTTGAGTT+TGG - chr8_4:564324-564343 Msa1305970:CDS 45.0%
TATGTGGCAGGCTTGAGTTT+GGG - chr8_4:564325-564344 Msa1305970:CDS 45.0%
TTGGAGAATGGATCAAGACG+CGG - chr8_4:564474-564493 Msa1305970:CDS 45.0%
!! TAATATGACGGGCCAAGAAG+TGG - chr8_4:564534-564553 Msa1305970:CDS 45.0%
!! AATATGACGGGCCAAGAAGT+GGG - chr8_4:564535-564554 Msa1305970:CDS 45.0%
ACCATTTAGTAAGAGCGGGT+CGG - chr8_4:564624-564643 Msa1305970:CDS 45.0%
AGTGTGTTGAAGTGGAGGAT+AGG - chr8_4:564712-564731 Msa1305970:CDS 45.0%
GTGTGTTGAAGTGGAGGATA+GGG - chr8_4:564713-564732 Msa1305970:CDS 45.0%
TGTGTTGAAGTGGAGGATAG+GGG - chr8_4:564714-564733 Msa1305970:CDS 45.0%
! GAGGATAGGGGGAGAATTTT+GGG - chr8_4:564726-564745 Msa1305970:CDS 45.0%
TCATTCCACTCTACTGAGCT+GGG + chr8_4:563317-563336 None:intergenic 45.0%
TCAAAGCAGAGCGAACTTCT+GGG - chr8_4:563405-563424 Msa1305970:CDS 45.0%
GTAGGAGTGGGAGGAAATTA+GGG + chr8_4:563541-563560 None:intergenic 45.0%
AGTAGGAGTGGGAGGAAATT+AGG + chr8_4:563542-563561 None:intergenic 45.0%
TTTCTTGGAGGAGTTGGAGT+AGG + chr8_4:563559-563578 None:intergenic 45.0%
CGAGTCTATGATCCATGCTA+TGG + chr8_4:563654-563673 None:intergenic 45.0%
GCATAGCCAAAAGAGACGAA+TGG + chr8_4:563720-563739 None:intergenic 45.0%
TTTCCACTCGTTACTTGCTC+CGG - chr8_4:563775-563794 Msa1305970:CDS 45.0%
GAGTTCAGTGTCTACACCTA+CGG + chr8_4:563858-563877 None:intergenic 45.0%
TCCGAAATTCTCTTACGCCA+CGG - chr8_4:563967-563986 Msa1305970:CDS 45.0%
TCCGTGGCGTAAGAGAATTT+CGG + chr8_4:563971-563990 None:intergenic 45.0%
ATGAAACTGGCGCGAAACTA+CGG - chr8_4:564037-564056 Msa1305970:CDS 45.0%
TAAAACCTAACCTCGCCACA+TGG + chr8_4:564219-564238 None:intergenic 45.0%
! CGAGAAACATTTTCCTTCCC+GGG - chr8_4:564267-564286 Msa1305970:CDS 45.0%
ATTGGAGCTAGTTATGTGGC+AGG - chr8_4:564313-564332 Msa1305970:CDS 45.0%
TTATGTGGCAGGCTTGAGTT+TGG - chr8_4:564324-564343 Msa1305970:CDS 45.0%
TATGTGGCAGGCTTGAGTTT+GGG - chr8_4:564325-564344 Msa1305970:CDS 45.0%
TTGGAGAATGGATCAAGACG+CGG - chr8_4:564474-564493 Msa1305970:CDS 45.0%
!! TAATATGACGGGCCAAGAAG+TGG - chr8_4:564534-564553 Msa1305970:CDS 45.0%
!! AATATGACGGGCCAAGAAGT+GGG - chr8_4:564535-564554 Msa1305970:CDS 45.0%
ACCATTTAGTAAGAGCGGGT+CGG - chr8_4:564624-564643 Msa1305970:CDS 45.0%
AGTGTGTTGAAGTGGAGGAT+AGG - chr8_4:564712-564731 Msa1305970:CDS 45.0%
GTGTGTTGAAGTGGAGGATA+GGG - chr8_4:564713-564732 Msa1305970:CDS 45.0%
TGTGTTGAAGTGGAGGATAG+GGG - chr8_4:564714-564733 Msa1305970:CDS 45.0%
! GAGGATAGGGGGAGAATTTT+GGG - chr8_4:564726-564745 Msa1305970:CDS 45.0%
CATTCCACTCTACTGAGCTG+GGG + chr8_4:563316-563335 None:intergenic 50.0%
CTCATTCCACTCTACTGAGC+TGG + chr8_4:563318-563337 None:intergenic 50.0%
CTCAAAGCAGAGCGAACTTC+TGG - chr8_4:563404-563423 Msa1305970:CDS 50.0%
CAAGTGCTATCGTGTGCTGT+GGG + chr8_4:563596-563615 None:intergenic 50.0%
TCAAACCAGAGCCCATAGCA+TGG - chr8_4:563639-563658 Msa1305970:CDS 50.0%
ATGATCCATGCTATGGGCTC+TGG + chr8_4:563647-563666 None:intergenic 50.0%
GACAACGCAGTTTCGAGAAC+CGG + chr8_4:563797-563816 None:intergenic 50.0%
TCTGTTTCATGCGCACCCTT+GGG - chr8_4:563876-563895 Msa1305970:CDS 50.0%
CCAAAAACCTTGAGACTCCG+TGG + chr8_4:563987-564006 None:intergenic 50.0%
! CCACGGAGTCTCAAGGTTTT+TGG - chr8_4:563984-564003 Msa1305970:CDS 50.0%
TGAAACTGGCGCGAAACTAC+GGG - chr8_4:564038-564057 Msa1305970:CDS 50.0%
ACTGCACGTGTGCTTCCAAT+TGG + chr8_4:564129-564148 None:intergenic 50.0%
! ATTGGAAGCACACGTGCAGT+TGG - chr8_4:564129-564148 Msa1305970:CDS 50.0%
ATATACGTCTCCATGTGGCG+AGG - chr8_4:564206-564225 Msa1305970:CDS 50.0%
! AACATTTTCCTTCCCGGGCT+CGG - chr8_4:564272-564291 Msa1305970:CDS 50.0%
CTTGAGTTTGGGTCGGTCTA+CGG - chr8_4:564336-564355 Msa1305970:CDS 50.0%
AAGCTTCAGCGAAGTCTTCG+AGG - chr8_4:564434-564453 Msa1305970:CDS 50.0%
AGAATGGATCAAGACGCGGA+GGG - chr8_4:564478-564497 Msa1305970:CDS 50.0%
! ATGACCCGATTCATGGGTTG+AGG - chr8_4:564578-564597 Msa1305970:CDS 50.0%
! TGACCCGATTCATGGGTTGA+GGG - chr8_4:564579-564598 Msa1305970:CDS 50.0%
ACCGACCCGCTCTTACTAAA+TGG + chr8_4:564628-564647 None:intergenic 50.0%
ATGGAGAAGAAGTAGGGTGG+AGG - chr8_4:564668-564687 Msa1305970:CDS 50.0%
! TGGAAGGGAGTGTGTTGAAG+TGG - chr8_4:564704-564723 Msa1305970:CDS 50.0%
! AAGGGAGTGTGTTGAAGTGG+AGG - chr8_4:564707-564726 Msa1305970:CDS 50.0%
GTGTTGAAGTGGAGGATAGG+GGG - chr8_4:564715-564734 Msa1305970:CDS 50.0%
! GGAGGATAGGGGGAGAATTT+TGG - chr8_4:564725-564744 Msa1305970:CDS 50.0%
TACCTGCCTGACCAAGCAAA+AGG - chr8_4:564754-564773 Msa1305970:CDS 50.0%
ACCTGCCTGACCAAGCAAAA+GGG - chr8_4:564755-564774 Msa1305970:CDS 50.0%
! TGACTCCCTTTTGCTTGGTC+AGG + chr8_4:564763-564782 None:intergenic 50.0%
CATTCCACTCTACTGAGCTG+GGG + chr8_4:563316-563335 None:intergenic 50.0%
CTCATTCCACTCTACTGAGC+TGG + chr8_4:563318-563337 None:intergenic 50.0%
CTCAAAGCAGAGCGAACTTC+TGG - chr8_4:563404-563423 Msa1305970:CDS 50.0%
CAAGTGCTATCGTGTGCTGT+GGG + chr8_4:563596-563615 None:intergenic 50.0%
TCAAACCAGAGCCCATAGCA+TGG - chr8_4:563639-563658 Msa1305970:CDS 50.0%
ATGATCCATGCTATGGGCTC+TGG + chr8_4:563647-563666 None:intergenic 50.0%
GACAACGCAGTTTCGAGAAC+CGG + chr8_4:563797-563816 None:intergenic 50.0%
TCTGTTTCATGCGCACCCTT+GGG - chr8_4:563876-563895 Msa1305970:CDS 50.0%
CCAAAAACCTTGAGACTCCG+TGG + chr8_4:563987-564006 None:intergenic 50.0%
! CCACGGAGTCTCAAGGTTTT+TGG - chr8_4:563984-564003 Msa1305970:CDS 50.0%
TGAAACTGGCGCGAAACTAC+GGG - chr8_4:564038-564057 Msa1305970:CDS 50.0%
ACTGCACGTGTGCTTCCAAT+TGG + chr8_4:564129-564148 None:intergenic 50.0%
! ATTGGAAGCACACGTGCAGT+TGG - chr8_4:564129-564148 Msa1305970:CDS 50.0%
ATATACGTCTCCATGTGGCG+AGG - chr8_4:564206-564225 Msa1305970:CDS 50.0%
! AACATTTTCCTTCCCGGGCT+CGG - chr8_4:564272-564291 Msa1305970:CDS 50.0%
CTTGAGTTTGGGTCGGTCTA+CGG - chr8_4:564336-564355 Msa1305970:CDS 50.0%
AAGCTTCAGCGAAGTCTTCG+AGG - chr8_4:564434-564453 Msa1305970:CDS 50.0%
AGAATGGATCAAGACGCGGA+GGG - chr8_4:564478-564497 Msa1305970:CDS 50.0%
! ATGACCCGATTCATGGGTTG+AGG - chr8_4:564578-564597 Msa1305970:CDS 50.0%
! TGACCCGATTCATGGGTTGA+GGG - chr8_4:564579-564598 Msa1305970:CDS 50.0%
ACCGACCCGCTCTTACTAAA+TGG + chr8_4:564628-564647 None:intergenic 50.0%
ATGGAGAAGAAGTAGGGTGG+AGG - chr8_4:564668-564687 Msa1305970:CDS 50.0%
! TGGAAGGGAGTGTGTTGAAG+TGG - chr8_4:564704-564723 Msa1305970:CDS 50.0%
! AAGGGAGTGTGTTGAAGTGG+AGG - chr8_4:564707-564726 Msa1305970:CDS 50.0%
GTGTTGAAGTGGAGGATAGG+GGG - chr8_4:564715-564734 Msa1305970:CDS 50.0%
! GGAGGATAGGGGGAGAATTT+TGG - chr8_4:564725-564744 Msa1305970:CDS 50.0%
TACCTGCCTGACCAAGCAAA+AGG - chr8_4:564754-564773 Msa1305970:CDS 50.0%
ACCTGCCTGACCAAGCAAAA+GGG - chr8_4:564755-564774 Msa1305970:CDS 50.0%
! TGACTCCCTTTTGCTTGGTC+AGG + chr8_4:564763-564782 None:intergenic 50.0%
AACTCCCCAGCTCAGTAGAG+TGG - chr8_4:563309-563328 Msa1305970:CDS 55.0%
GGAGGAGTTGGAGTAGGAGT+GGG + chr8_4:563553-563572 None:intergenic 55.0%
TGGAGGAGTTGGAGTAGGAG+TGG + chr8_4:563554-563573 None:intergenic 55.0%
ATCGTGTGCTGTGGGTGAGT+TGG + chr8_4:563588-563607 None:intergenic 55.0%
GCAAGTGCTATCGTGTGCTG+TGG + chr8_4:563597-563616 None:intergenic 55.0%
TAGAGTGAACCTGCCTCGCT+AGG + chr8_4:563755-563774 None:intergenic 55.0%
GAACCGGAGCAAGTAACGAG+TGG + chr8_4:563781-563800 None:intergenic 55.0%
CTCTGTTTCATGCGCACCCT+TGG - chr8_4:563875-563894 Msa1305970:CDS 55.0%
TCTTACGCCACGGAGTCTCA+AGG - chr8_4:563977-563996 Msa1305970:CDS 55.0%
GCGCGAAACTACGGGCAAAA+CGG - chr8_4:564046-564065 Msa1305970:CDS 55.0%
! CGGTCTAGCTCACCACCAAT+TGG - chr8_4:564111-564130 Msa1305970:CDS 55.0%
GCACGTGTGCTTCCAATTGG+TGG + chr8_4:564126-564145 None:intergenic 55.0%
! ACATTTTCCTTCCCGGGCTC+GGG - chr8_4:564273-564292 Msa1305970:CDS 55.0%
TGGCAGGCTTGAGTTTGGGT+CGG - chr8_4:564329-564348 Msa1305970:CDS 55.0%
GAGAATGGATCAAGACGCGG+AGG - chr8_4:564477-564496 Msa1305970:CDS 55.0%
GAATGGATCAAGACGCGGAG+GGG - chr8_4:564479-564498 Msa1305970:CDS 55.0%
TGAATCGGGTCATCACCCGT+AGG + chr8_4:564571-564590 None:intergenic 55.0%
ACGGGTGATGACCCGATTCA+TGG - chr8_4:564571-564590 Msa1305970:CDS 55.0%
CGGGTGATGACCCGATTCAT+GGG - chr8_4:564572-564591 Msa1305970:CDS 55.0%
! GACCCGATTCATGGGTTGAG+GGG - chr8_4:564580-564599 Msa1305970:CDS 55.0%
! ACCCGATTCATGGGTTGAGG+GGG - chr8_4:564581-564600 Msa1305970:CDS 55.0%
AGCGGGTCGGTTGTAATAGC+AGG - chr8_4:564637-564656 Msa1305970:CDS 55.0%
GCGGGTCGGTTGTAATAGCA+GGG - chr8_4:564638-564657 Msa1305970:CDS 55.0%
CGGGTCGGTTGTAATAGCAG+GGG - chr8_4:564639-564658 Msa1305970:CDS 55.0%
! TCCCTTTTGCTTGGTCAGGC+AGG + chr8_4:564759-564778 None:intergenic 55.0%
AACTCCCCAGCTCAGTAGAG+TGG - chr8_4:563309-563328 Msa1305970:CDS 55.0%
GGAGGAGTTGGAGTAGGAGT+GGG + chr8_4:563553-563572 None:intergenic 55.0%
TGGAGGAGTTGGAGTAGGAG+TGG + chr8_4:563554-563573 None:intergenic 55.0%
ATCGTGTGCTGTGGGTGAGT+TGG + chr8_4:563588-563607 None:intergenic 55.0%
GCAAGTGCTATCGTGTGCTG+TGG + chr8_4:563597-563616 None:intergenic 55.0%
TAGAGTGAACCTGCCTCGCT+AGG + chr8_4:563755-563774 None:intergenic 55.0%
GAACCGGAGCAAGTAACGAG+TGG + chr8_4:563781-563800 None:intergenic 55.0%
CTCTGTTTCATGCGCACCCT+TGG - chr8_4:563875-563894 Msa1305970:CDS 55.0%
TCTTACGCCACGGAGTCTCA+AGG - chr8_4:563977-563996 Msa1305970:CDS 55.0%
GCGCGAAACTACGGGCAAAA+CGG - chr8_4:564046-564065 Msa1305970:CDS 55.0%
! CGGTCTAGCTCACCACCAAT+TGG - chr8_4:564111-564130 Msa1305970:CDS 55.0%
GCACGTGTGCTTCCAATTGG+TGG + chr8_4:564126-564145 None:intergenic 55.0%
! ACATTTTCCTTCCCGGGCTC+GGG - chr8_4:564273-564292 Msa1305970:CDS 55.0%
TGGCAGGCTTGAGTTTGGGT+CGG - chr8_4:564329-564348 Msa1305970:CDS 55.0%
GAGAATGGATCAAGACGCGG+AGG - chr8_4:564477-564496 Msa1305970:CDS 55.0%
GAATGGATCAAGACGCGGAG+GGG - chr8_4:564479-564498 Msa1305970:CDS 55.0%
TGAATCGGGTCATCACCCGT+AGG + chr8_4:564571-564590 None:intergenic 55.0%
ACGGGTGATGACCCGATTCA+TGG - chr8_4:564571-564590 Msa1305970:CDS 55.0%
CGGGTGATGACCCGATTCAT+GGG - chr8_4:564572-564591 Msa1305970:CDS 55.0%
! GACCCGATTCATGGGTTGAG+GGG - chr8_4:564580-564599 Msa1305970:CDS 55.0%
! ACCCGATTCATGGGTTGAGG+GGG - chr8_4:564581-564600 Msa1305970:CDS 55.0%
AGCGGGTCGGTTGTAATAGC+AGG - chr8_4:564637-564656 Msa1305970:CDS 55.0%
GCGGGTCGGTTGTAATAGCA+GGG - chr8_4:564638-564657 Msa1305970:CDS 55.0%
CGGGTCGGTTGTAATAGCAG+GGG - chr8_4:564639-564658 Msa1305970:CDS 55.0%
! TCCCTTTTGCTTGGTCAGGC+AGG + chr8_4:564759-564778 None:intergenic 55.0%
GGAGTTGGAGTAGGAGTGGG+AGG + chr8_4:563550-563569 None:intergenic 60.0%
CGTCTCCATGTGGCGAGGTT+AGG - chr8_4:564211-564230 Msa1305970:CDS 60.0%
GTTTGGGTGGGCCCGGAAAT+TGG - chr8_4:564295-564314 Msa1305970:CDS 60.0%
GCTTCCACGAGCCCACTTCT+TGG + chr8_4:564549-564568 None:intergenic 60.0%
! AGTGGGCTCGTGGAAGCCTA+CGG - chr8_4:564552-564571 Msa1305970:CDS 60.0%
GCCCCCTCAACCCATGAATC+GGG + chr8_4:564585-564604 None:intergenic 60.0%
CGCCCCCTCAACCCATGAAT+CGG + chr8_4:564586-564605 None:intergenic 60.0%
GGGTTGAGGGGGCGATATGT+CGG - chr8_4:564592-564611 Msa1305970:CDS 60.0%
GGTTGAGGGGGCGATATGTC+GGG - chr8_4:564593-564612 Msa1305970:CDS 60.0%
GTTGAGGGGGCGATATGTCG+GGG - chr8_4:564594-564613 Msa1305970:CDS 60.0%
GGAGTTGGAGTAGGAGTGGG+AGG + chr8_4:563550-563569 None:intergenic 60.0%
CGTCTCCATGTGGCGAGGTT+AGG - chr8_4:564211-564230 Msa1305970:CDS 60.0%
GTTTGGGTGGGCCCGGAAAT+TGG - chr8_4:564295-564314 Msa1305970:CDS 60.0%
GCTTCCACGAGCCCACTTCT+TGG + chr8_4:564549-564568 None:intergenic 60.0%
! AGTGGGCTCGTGGAAGCCTA+CGG - chr8_4:564552-564571 Msa1305970:CDS 60.0%
GCCCCCTCAACCCATGAATC+GGG + chr8_4:564585-564604 None:intergenic 60.0%
CGCCCCCTCAACCCATGAAT+CGG + chr8_4:564586-564605 None:intergenic 60.0%
GGGTTGAGGGGGCGATATGT+CGG - chr8_4:564592-564611 Msa1305970:CDS 60.0%
GGTTGAGGGGGCGATATGTC+GGG - chr8_4:564593-564612 Msa1305970:CDS 60.0%
GTTGAGGGGGCGATATGTCG+GGG - chr8_4:564594-564613 Msa1305970:CDS 60.0%
TTCCTTCCCGGGCTCGGGTT+TGG - chr8_4:564278-564297 Msa1305970:CDS 65.0%
TCCTTCCCGGGCTCGGGTTT+GGG - chr8_4:564279-564298 Msa1305970:CDS 65.0%
GTGGGCTCGTGGAAGCCTAC+GGG - chr8_4:564553-564572 Msa1305970:CDS 65.0%
TTCCTTCCCGGGCTCGGGTT+TGG - chr8_4:564278-564297 Msa1305970:CDS 65.0%
TCCTTCCCGGGCTCGGGTTT+GGG - chr8_4:564279-564298 Msa1305970:CDS 65.0%
GTGGGCTCGTGGAAGCCTAC+GGG - chr8_4:564553-564572 Msa1305970:CDS 65.0%
ACCCAAACCCGAGCCCGGGA+AGG + chr8_4:564283-564302 None:intergenic 70.0%
TTCCCGGGCTCGGGTTTGGG+TGG - chr8_4:564282-564301 Msa1305970:CDS 70.0%
TCCCGGGCTCGGGTTTGGGT+GGG - chr8_4:564283-564302 Msa1305970:CDS 70.0%
! CGGGCCAAGAAGTGGGCTCG+TGG - chr8_4:564542-564561 Msa1305970:CDS 70.0%
ACCCAAACCCGAGCCCGGGA+AGG + chr8_4:564283-564302 None:intergenic 70.0%
TTCCCGGGCTCGGGTTTGGG+TGG - chr8_4:564282-564301 Msa1305970:CDS 70.0%
TCCCGGGCTCGGGTTTGGGT+GGG - chr8_4:564283-564302 Msa1305970:CDS 70.0%
! CGGGCCAAGAAGTGGGCTCG+TGG - chr8_4:564542-564561 Msa1305970:CDS 70.0%
CGCTTGCGACGCGCCTAGCG+AGG - chr8_4:563739-563758 Msa1305970:CDS 75.0%
TGCGACGCGCCTAGCGAGGC+AGG - chr8_4:563743-563762 Msa1305970:CDS 75.0%
GCCCACCCAAACCCGAGCCC+GGG + chr8_4:564287-564306 None:intergenic 75.0%
GGCCCACCCAAACCCGAGCC+CGG + chr8_4:564288-564307 None:intergenic 75.0%
GGCTCGGGTTTGGGTGGGCC+CGG - chr8_4:564288-564307 Msa1305970:CDS 75.0%
CGCTTGCGACGCGCCTAGCG+AGG - chr8_4:563739-563758 Msa1305970:CDS 75.0%
TGCGACGCGCCTAGCGAGGC+AGG - chr8_4:563743-563762 Msa1305970:CDS 75.0%
GCCCACCCAAACCCGAGCCC+GGG + chr8_4:564287-564306 None:intergenic 75.0%
GGCCCACCCAAACCCGAGCC+CGG + chr8_4:564288-564307 None:intergenic 75.0%
GGCTCGGGTTTGGGTGGGCC+CGG - chr8_4:564288-564307 Msa1305970:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 563284 564852 563284 ID=Msa1305970;Name=Msa1305970
chr8_4 mRNA 563284 564852 563284 ID=Msa1305970-mRNA-1;Parent=Msa1305970;Name=Msa1305970-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|-1|0|1|-1|1|1|0|522
chr8_4 exon 563284 564852 563284 ID=Msa1305970-mRNA-1:exon:72;Parent=Msa1305970-mRNA-1
chr8_4 CDS 563284 564852 563284 ID=Msa1305970-mRNA-1:cds;Parent=Msa1305970-mRNA-1
Gene Sequence

>Msa1305970

ATGGATATTTGGTCATGGATATCTGAACTCCCCAGCTCAGTAGAGTGGAATGAGTCTGACTCACCAATGAAGTTCGAACTTGCTAGAGATGGAAAGAACGATTCAACTCGTTCTATTTATCTCAAAGCAGAGCGAACTTCTGGGTCAGACTCAGAAGCACTAGTAACCTTCATGGTATTCTTACAAGGCTTCTATCCATTCAACACCCAAAAACCTATTTGGATCTCCGAGAAATGCACACTCTCTTCAGAAAACCCTAATTTCCTCCCACTCCTACTCCAACTCCTCCAAGAAATCATATCCAACTCACCCACAGCACACGATAGCACTTGCCCTAGATCCCAGCTTCAAAAACTCAAACCAGAGCCCATAGCATGGATCATAGACTCGCACACACCAGAATCCCTCTCCATTTTCTTCAACCTTGTTTTCACCATTCGTCTCTTTTGGCTATGCGCTTGCGACGCGCCTAGCGAGGCAGGTTCACTCTATTTCCACTCGTTACTTGCTCCGGTTCTCGAAACTGCGTTGTCGAAGAAACTAGCTTCAGTGCTAAGAACCTTCTTTATTACCGTAGGTGTAGACACTGAACTCTGTTTCATGCGCACCCTTGGGTACATAATAGCAAAATGGTGCATTATAAGAGAATTGGGTGTAGGATTGCAAACACTCGTGCCTTCGAATCCGAAATTCTCTTACGCCACGGAGTCTCAAGGTTTTTGGATTCTGAAAGGCTACGCGCCAGTTATGACTATGAAACTGGCGCGAAACTACGGGCAAAACGGTAAATTTCAAGGTATTGATGCTAAGGAGTCAATAATCAGGTACGGTCTAGCTCACCACCAATTGGAAGCACACGTGCAGTTGGAATATACAGTTGGATTTTATGATGGATTCATTCAGGTTAATACACGTGTTGATAATATACGTCTCCATGTGGCGAGGTTAGGTTTTAAACATGGTGATGATGTGGATTTTGTTGACGAGAAACATTTTCCTTCCCGGGCTCGGGTTTGGGTGGGCCCGGAAATTGGAGCTAGTTATGTGGCAGGCTTGAGTTTGGGTCGGTCTACGGAGAATAATGAAAGAGAAGTGGAAATTGAGAAGGTTGTTAATGGTAATTTCGAGAAATCAGATATTTCAAAGGTGAAAGCTTCAGCGAAGTCTTCGAGGAGAATGAGAACAAAGAGTTGGAGAATGGATCAAGACGCGGAGGGGAATGCAGCTATATTTGATGTTGTTTTGCATGATAATATGACGGGCCAAGAAGTGGGCTCGTGGAAGCCTACGGGTGATGACCCGATTCATGGGTTGAGGGGGCGATATGTCGGGGCAAATAGACCATTTAGTAAGAGCGGGTCGGTTGTAATAGCAGGGGATGAATATGGAGAAGAAGTAGGGTGGAGGTTAAGTAAAGAGATGGAAGGGAGTGTGTTGAAGTGGAGGATAGGGGGAGAATTTTGGGTTAGTTACCTGCCTGACCAAGCAAAAGGGAGTCATTTTGAAACTAGATGTATTGAGTGGTGTGATGAAGTTGATTTGCCTCTAATTCATGGAAAATTACTCTGA

Protein sequence

>Msa1305970

MDIWSWISELPSSVEWNESDSPMKFELARDGKNDSTRSIYLKAERTSGSDSEALVTFMVFLQGFYPFNTQKPIWISEKCTLSSENPNFLPLLLQLLQEIISNSPTAHDSTCPRSQLQKLKPEPIAWIIDSHTPESLSIFFNLVFTIRLFWLCACDAPSEAGSLYFHSLLAPVLETALSKKLASVLRTFFITVGVDTELCFMRTLGYIIAKWCIIRELGVGLQTLVPSNPKFSYATESQGFWILKGYAPVMTMKLARNYGQNGKFQGIDAKESIIRYGLAHHQLEAHVQLEYTVGFYDGFIQVNTRVDNIRLHVARLGFKHGDDVDFVDEKHFPSRARVWVGPEIGASYVAGLSLGRSTENNEREVEIEKVVNGNFEKSDISKVKASAKSSRRMRTKSWRMDQDAEGNAAIFDVVLHDNMTGQEVGSWKPTGDDPIHGLRGRYVGANRPFSKSGSVVIAGDEYGEEVGWRLSKEMEGSVLKWRIGGEFWVSYLPDQAKGSHFETRCIEWCDEVDLPLIHGKLL*