Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004660 | XP_003621056.2 | 92.135 | 178 | 14 | 0 | 1 | 178 | 1 | 178 | 1.40e-118 | 343 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004660 | sp|Q9SXZ2|FT_ARATH | 65.909 | 176 | 59 | 1 | 1 | 176 | 1 | 175 | 2.39e-86 | 254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004660 | F8T7T2 | 92.135 | 178 | 14 | 0 | 1 | 178 | 1 | 178 | 6.66e-119 | 343 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa1004660 | 0.819164 | 1.340715e-52 | -8.615850e-47 |
| Msa0002110 | Msa1004660 | 0.824586 | 7.450258e-54 | -8.615850e-47 |
| Msa0007810 | Msa1004660 | 0.843354 | 1.475427e-58 | -8.615850e-47 |
| Msa0011060 | Msa1004660 | 0.816923 | 4.304999e-52 | -8.615850e-47 |
| Msa0011410 | Msa1004660 | 0.802412 | 5.679190e-49 | -8.615850e-47 |
| Msa0011440 | Msa1004660 | 0.816349 | 5.789336e-52 | -8.615850e-47 |
| Msa0011920 | Msa1004660 | 0.803240 | 3.830825e-49 | -8.615850e-47 |
| Msa0017300 | Msa1004660 | 0.813698 | 2.243618e-51 | -8.615850e-47 |
| Msa0032890 | Msa1004660 | 0.858346 | 8.777282e-63 | -8.615850e-47 |
| Msa0032930 | Msa1004660 | 0.831736 | 1.409504e-55 | -8.615850e-47 |
| Msa0042520 | Msa1004660 | 0.803457 | 3.454977e-49 | -8.615850e-47 |
| Msa0046020 | Msa1004660 | 0.802184 | 6.329513e-49 | -8.615850e-47 |
| Msa0049670 | Msa1004660 | 0.805600 | 1.234398e-49 | -8.615850e-47 |
| Msa0053260 | Msa1004660 | 0.844559 | 7.015890e-59 | -8.615850e-47 |
| Msa0056220 | Msa1004660 | 0.817948 | 2.530709e-52 | -8.615850e-47 |
| Msa0056230 | Msa1004660 | 0.835754 | 1.395770e-56 | -8.615850e-47 |
| Msa0066890 | Msa1004660 | 0.801026 | 1.093511e-48 | -8.615850e-47 |
| Msa0067370 | Msa1004660 | 0.807997 | 3.845855e-50 | -8.615850e-47 |
| Msa0067750 | Msa1004660 | 0.801978 | 6.977300e-49 | -8.615850e-47 |
| Msa0074860 | Msa1004660 | 0.828678 | 7.867208e-55 | -8.615850e-47 |
| Msa0075990 | Msa1004660 | 0.817548 | 3.115173e-52 | -8.615850e-47 |
| Msa0080060 | Msa1004660 | 0.854909 | 8.990558e-62 | -8.615850e-47 |
| Msa0081610 | Msa1004660 | 0.824091 | 9.739046e-54 | -8.615850e-47 |
| Msa0081700 | Msa1004660 | 0.847805 | 9.166415e-60 | -8.615850e-47 |
| Msa0095810 | Msa1004660 | 0.823480 | 1.354276e-53 | -8.615850e-47 |
| Msa0098500 | Msa1004660 | 0.854919 | 8.932898e-62 | -8.615850e-47 |
| Msa0098750 | Msa1004660 | 0.832166 | 1.103809e-55 | -8.615850e-47 |
| Msa0605150 | Msa1004660 | 0.801291 | 9.648836e-49 | -8.615850e-47 |
| Msa0605210 | Msa1004660 | 0.802519 | 5.399747e-49 | -8.615850e-47 |
| Msa0606340 | Msa1004660 | 0.816493 | 5.375484e-52 | -8.615850e-47 |
| Msa0606350 | Msa1004660 | 0.803360 | 3.618477e-49 | -8.615850e-47 |
| Msa0617470 | Msa1004660 | 0.830994 | 2.145722e-55 | -8.615850e-47 |
| Msa0622930 | Msa1004660 | 0.818111 | 2.324780e-52 | -8.615850e-47 |
| Msa0625550 | Msa1004660 | 0.806285 | 8.860827e-50 | -8.615850e-47 |
| Msa0635070 | Msa1004660 | 0.807711 | 4.422815e-50 | -8.615850e-47 |
| Msa0654400 | Msa1004660 | 0.854242 | 1.402374e-61 | -8.615850e-47 |
| Msa0654500 | Msa1004660 | 0.852419 | 4.674968e-61 | -8.615850e-47 |
| Msa0654570 | Msa1004660 | 0.804349 | 2.254604e-49 | -8.615850e-47 |
| Msa0656570 | Msa1004660 | 0.825800 | 3.846538e-54 | -8.615850e-47 |
| Msa0661540 | Msa1004660 | 0.806835 | 6.780533e-50 | -8.615850e-47 |
| Msa0667670 | Msa1004660 | 0.839269 | 1.752783e-57 | -8.615850e-47 |
| Msa0676290 | Msa1004660 | 0.832149 | 1.114335e-55 | -8.615850e-47 |
| Msa0676570 | Msa1004660 | 0.805401 | 1.358987e-49 | -8.615850e-47 |
| Msa0685810 | Msa1004660 | 0.807693 | 4.461403e-50 | -8.615850e-47 |
| Msa0690100 | Msa1004660 | 0.834128 | 3.584322e-56 | -8.615850e-47 |
| Msa0695250 | Msa1004660 | 0.820711 | 5.936417e-53 | -8.615850e-47 |
| Msa0700250 | Msa1004660 | 0.822964 | 1.787077e-53 | -8.615850e-47 |
| Msa0700870 | Msa1004660 | 0.809842 | 1.549371e-50 | -8.615850e-47 |
| Msa0700930 | Msa1004660 | 0.808327 | 3.270493e-50 | -8.615850e-47 |
| Msa0701800 | Msa1004660 | 0.814663 | 1.373419e-51 | -8.615850e-47 |
| Msa0711110 | Msa1004660 | 0.814041 | 1.884872e-51 | -8.615850e-47 |
| Msa0742690 | Msa1004660 | 0.823253 | 1.529981e-53 | -8.615850e-47 |
| Msa0779830 | Msa1004660 | 0.825355 | 4.903583e-54 | -8.615850e-47 |
| Msa0788450 | Msa1004660 | 0.813730 | 2.208025e-51 | -8.615850e-47 |
| Msa0793130 | Msa1004660 | 0.803659 | 3.136162e-49 | -8.615850e-47 |
| Msa0794900 | Msa1004660 | 0.813249 | 2.816902e-51 | -8.615850e-47 |
| Msa0820130 | Msa1004660 | 0.804539 | 2.058108e-49 | -8.615850e-47 |
| Msa0825570 | Msa1004660 | 0.813825 | 2.103857e-51 | -8.615850e-47 |
| Msa0826540 | Msa1004660 | 0.804875 | 1.750821e-49 | -8.615850e-47 |
| Msa0827560 | Msa1004660 | 0.816801 | 4.585010e-52 | -8.615850e-47 |
| Msa0829210 | Msa1004660 | 0.815575 | 8.618378e-52 | -8.615850e-47 |
| Msa0829250 | Msa1004660 | 0.829052 | 6.384934e-55 | -8.615850e-47 |
| Msa0829770 | Msa1004660 | 0.813923 | 2.001338e-51 | -8.615850e-47 |
| Msa0832160 | Msa1004660 | 0.817126 | 3.875821e-52 | -8.615850e-47 |
| Msa0127220 | Msa1004660 | 0.809146 | 2.185805e-50 | -8.615850e-47 |
| Msa0127350 | Msa1004660 | 0.804918 | 1.715199e-49 | -8.615850e-47 |
| Msa0127910 | Msa1004660 | 0.843791 | 1.127486e-58 | -8.615850e-47 |
| Msa0138990 | Msa1004660 | 0.805645 | 1.208027e-49 | -8.615850e-47 |
| Msa0139930 | Msa1004660 | 0.883862 | 3.131872e-71 | -8.615850e-47 |
| Msa0151380 | Msa1004660 | 0.803840 | 2.877505e-49 | -8.615850e-47 |
| Msa0151510 | Msa1004660 | 0.806348 | 8.593702e-50 | -8.615850e-47 |
| Msa0154880 | Msa1004660 | 0.806048 | 9.937635e-50 | -8.615850e-47 |
| Msa0154890 | Msa1004660 | 0.802345 | 5.862640e-49 | -8.615850e-47 |
| Msa0159240 | Msa1004660 | 0.822082 | 2.865047e-53 | -8.615850e-47 |
| Msa0167160 | Msa1004660 | 0.811121 | 8.200649e-51 | -8.615850e-47 |
| Msa0168770 | Msa1004660 | 0.839954 | 1.163233e-57 | -8.615850e-47 |
| Msa0173580 | Msa1004660 | 0.841112 | 5.788049e-58 | -8.615850e-47 |
| Msa0173950 | Msa1004660 | 0.829012 | 6.531739e-55 | -8.615850e-47 |
| Msa0174060 | Msa1004660 | 0.864654 | 1.040617e-64 | -8.615850e-47 |
| Msa0183960 | Msa1004660 | 0.818858 | 1.573897e-52 | -8.615850e-47 |
| Msa0198140 | Msa1004660 | 0.807224 | 5.611855e-50 | -8.615850e-47 |
| Msa0198220 | Msa1004660 | 0.807739 | 4.362243e-50 | -8.615850e-47 |
| Msa0206040 | Msa1004660 | 0.811183 | 7.954215e-51 | -8.615850e-47 |
| Msa0212950 | Msa1004660 | 0.814523 | 1.475472e-51 | -8.615850e-47 |
| Msa0216150 | Msa1004660 | 0.820515 | 6.586483e-53 | -8.615850e-47 |
| Msa0225280 | Msa1004660 | 0.805192 | 1.503111e-49 | -8.615850e-47 |
| Msa0232660 | Msa1004660 | 0.812258 | 4.641849e-51 | -8.615850e-47 |
| Msa0367200 | Msa1004660 | 0.823293 | 1.497883e-53 | -8.615850e-47 |
| Msa0368450 | Msa1004660 | 0.855743 | 5.139117e-62 | -8.615850e-47 |
| Msa0375930 | Msa1004660 | 0.823192 | 1.581376e-53 | -8.615850e-47 |
| Msa0378440 | Msa1004660 | 0.824738 | 6.861302e-54 | -8.615850e-47 |
| Msa0380450 | Msa1004660 | 0.817447 | 3.281970e-52 | -8.615850e-47 |
| Msa0385280 | Msa1004660 | 0.805799 | 1.121100e-49 | -8.615850e-47 |
| Msa0387630 | Msa1004660 | 0.831411 | 1.695038e-55 | -8.615850e-47 |
| Msa0389080 | Msa1004660 | 0.819770 | 9.753779e-53 | -8.615850e-47 |
| Msa0390590 | Msa1004660 | 0.841852 | 3.696040e-58 | -8.615850e-47 |
| Msa0403740 | Msa1004660 | 0.801753 | 7.760515e-49 | -8.615850e-47 |
| Msa0412480 | Msa1004660 | 0.806951 | 6.409281e-50 | -8.615850e-47 |
| Msa0414930 | Msa1004660 | 0.829035 | 6.448460e-55 | -8.615850e-47 |
| Msa0415760 | Msa1004660 | 0.822951 | 1.799519e-53 | -8.615850e-47 |
| Msa0419150 | Msa1004660 | 0.800209 | 1.604203e-48 | -8.615850e-47 |
| Msa0424570 | Msa1004660 | 0.821908 | 3.144448e-53 | -8.615850e-47 |
| Msa0427890 | Msa1004660 | 0.842213 | 2.967142e-58 | -8.615850e-47 |
| Msa0437820 | Msa1004660 | 0.800392 | 1.472558e-48 | -8.615850e-47 |
| Msa0459790 | Msa1004660 | 0.825805 | 3.835620e-54 | -8.615850e-47 |
| Msa0460510 | Msa1004660 | 0.828760 | 7.515586e-55 | -8.615850e-47 |
| Msa0461620 | Msa1004660 | 0.852208 | 5.365842e-61 | -8.615850e-47 |
| Msa0463030 | Msa1004660 | 0.815820 | 7.599550e-52 | -8.615850e-47 |
| Msa0464980 | Msa1004660 | 0.801447 | 8.966472e-49 | -8.615850e-47 |
| Msa0474120 | Msa1004660 | 0.843677 | 1.209787e-58 | -8.615850e-47 |
| Msa0475690 | Msa1004660 | 0.815928 | 7.188621e-52 | -8.615850e-47 |
| Msa0476890 | Msa1004660 | 0.808423 | 3.119680e-50 | -8.615850e-47 |
| Msa0993590 | Msa1004660 | 0.818578 | 1.821895e-52 | -8.615850e-47 |
| Msa1004310 | Msa1004660 | 0.845576 | 3.726355e-59 | -8.615850e-47 |
| Msa1004630 | Msa1004660 | 0.898778 | 3.801521e-77 | -8.615850e-47 |
| Msa1004660 | Msa1014550 | 0.834304 | 3.239047e-56 | -8.615850e-47 |
| Msa1004660 | Msa1016450 | 0.805918 | 1.058550e-49 | -8.615850e-47 |
| Msa1004660 | Msa1016580 | 0.819712 | 1.005827e-52 | -8.615850e-47 |
| Msa1004660 | Msa1018210 | 0.802158 | 6.405855e-49 | -8.615850e-47 |
| Msa1004660 | Msa1029030 | 0.813993 | 1.931669e-51 | -8.615850e-47 |
| Msa1004660 | Msa1031310 | 0.843238 | 1.584077e-58 | -8.615850e-47 |
| Msa1004660 | Msa1032790 | 0.802645 | 5.083838e-49 | -8.615850e-47 |
| Msa1004660 | Msa1038570 | 0.821371 | 4.184220e-53 | -8.615850e-47 |
| Msa1004660 | Msa1045940 | 0.855836 | 4.829042e-62 | -8.615850e-47 |
| Msa1004660 | Msa1046980 | 0.968873 | 2.665847e-129 | -8.615850e-47 |
| Msa1004660 | Msa1046990 | 0.897469 | 1.363981e-76 | -8.615850e-47 |
| Msa1004660 | Msa1055520 | 0.834082 | 3.680849e-56 | -8.615850e-47 |
| Msa1004660 | Msa1057940 | 0.853549 | 2.221031e-61 | -8.615850e-47 |
| Msa1004660 | Msa1078280 | 0.828896 | 6.968836e-55 | -8.615850e-47 |
| Msa1004660 | Msa1078590 | 0.805651 | 1.204578e-49 | -8.615850e-47 |
| Msa1004660 | Msa1078760 | 0.808164 | 3.543678e-50 | -8.615850e-47 |
| Msa1004660 | Msa1085570 | 0.802245 | 6.148846e-49 | -8.615850e-47 |
| Msa1004660 | Msa1088000 | 0.832859 | 7.430862e-56 | -8.615850e-47 |
| Msa1004660 | Msa1090020 | 0.802669 | 5.026846e-49 | -8.615850e-47 |
| Msa1004660 | Msa1091130 | 0.968416 | 1.202612e-128 | -8.615850e-47 |
| Msa1004660 | Msa1093190 | 0.812067 | 5.107330e-51 | -8.615850e-47 |
| Msa1004660 | Msa1101050 | 0.845248 | 4.571583e-59 | -8.615850e-47 |
| Msa1004660 | Msa1104020 | 0.847432 | 1.160531e-59 | -8.615850e-47 |
| Msa1004660 | Msa1112210 | 0.815859 | 7.450190e-52 | -8.615850e-47 |
| Msa1004660 | Msa1117770 | 0.829898 | 3.977706e-55 | -8.615850e-47 |
| Msa1004660 | Msa1121720 | 0.839823 | 1.258165e-57 | -8.615850e-47 |
| Msa1004660 | Msa1123490 | 0.824910 | 6.247894e-54 | -8.615850e-47 |
| Msa1004660 | Msa1129120 | 0.836227 | 1.058756e-56 | -8.615850e-47 |
| Msa1004660 | Msa1129160 | 0.819738 | 9.918346e-53 | -8.615850e-47 |
| Msa1004660 | Msa1134430 | 0.891046 | 5.675242e-74 | -8.615850e-47 |
| Msa1004660 | Msa1134460 | 0.856448 | 3.196177e-62 | -8.615850e-47 |
| Msa1004660 | Msa1134480 | 0.927532 | 1.030142e-91 | -8.615850e-47 |
| Msa1004660 | Msa1144380 | 0.838335 | 3.057608e-57 | -8.615850e-47 |
| Msa1004660 | Msa1156120 | 0.831993 | 1.218366e-55 | -8.615850e-47 |
| Msa1004660 | Msa1158280 | 0.853866 | 1.800402e-61 | -8.615850e-47 |
| Msa1004660 | Msa1169590 | 0.823575 | 1.286525e-53 | -8.615850e-47 |
| Msa1004660 | Msa1169780 | 0.801937 | 7.113049e-49 | -8.615850e-47 |
| Msa1004660 | Msa1181370 | 0.813157 | 2.950977e-51 | -8.615850e-47 |
| Msa1004660 | Msa1194480 | 0.830864 | 2.310230e-55 | -8.615850e-47 |
| Msa1004660 | Msa1199540 | 0.837140 | 6.195809e-57 | -8.615850e-47 |
| Msa1004660 | Msa1203510 | 0.813904 | 2.021363e-51 | -8.615850e-47 |
| Msa1004660 | Msa1212150 | 0.832075 | 1.162730e-55 | -8.615850e-47 |
| Msa1004660 | Msa1212210 | 0.823338 | 1.461792e-53 | -8.615850e-47 |
| Msa1004660 | Msa1213470 | 0.834153 | 3.533047e-56 | -8.615850e-47 |
| Msa1004660 | Msa1219530 | 0.803650 | 3.150967e-49 | -8.615850e-47 |
| Msa1004660 | Msa1220700 | 0.805912 | 1.061769e-49 | -8.615850e-47 |
| Msa1004660 | Msa1235960 | 0.803795 | 2.938873e-49 | -8.615850e-47 |
| Msa1004660 | Msa1235990 | 0.805546 | 1.267012e-49 | -8.615850e-47 |
| Msa1004660 | Msa1236120 | 0.817773 | 2.771347e-52 | -8.615850e-47 |
| Msa1004660 | Msa1236190 | 0.838127 | 3.457728e-57 | -8.615850e-47 |
| Msa1004660 | Msa1255880 | 0.801986 | 6.951233e-49 | -8.615850e-47 |
| Msa1004660 | Msa1260640 | 0.814267 | 1.680530e-51 | -8.615850e-47 |
| Msa1004660 | Msa1265670 | 0.827128 | 1.855919e-54 | -8.615850e-47 |
| Msa1004660 | Msa1273620 | 0.821073 | 4.900326e-53 | -8.615850e-47 |
| Msa1004660 | Msa1277270 | 0.823851 | 1.108616e-53 | -8.615850e-47 |
| Msa1004660 | Msa1278080 | 0.822830 | 1.920199e-53 | -8.615850e-47 |
| Msa1004660 | Msa1279200 | 0.827561 | 1.461701e-54 | -8.615850e-47 |
| Msa1004660 | Msa1279250 | 0.810133 | 1.341141e-50 | -8.615850e-47 |
| Msa1004660 | Msa1290090 | 0.815577 | 8.609332e-52 | -8.615850e-47 |
| Msa1004660 | Msa1299220 | -0.806935 | 6.460766e-50 | -8.615850e-47 |
| Msa1004660 | Msa1300370 | 0.834240 | 3.360502e-56 | -8.615850e-47 |
| Msa1004660 | Msa1303620 | 0.831932 | 1.260987e-55 | -8.615850e-47 |
| Msa1004660 | Msa1305970 | 0.853051 | 3.084992e-61 | -8.615850e-47 |
| Msa1004660 | Msa1311600 | 0.824260 | 8.887474e-54 | -8.615850e-47 |
| Msa1004660 | Msa1315880 | 0.822581 | 2.194499e-53 | -8.615850e-47 |
| Msa1004660 | Msa1328680 | 0.822789 | 1.962477e-53 | -8.615850e-47 |
| Msa1004660 | Msa1333220 | 0.805842 | 1.098175e-49 | -8.615850e-47 |
| Msa1004660 | Msa1341710 | 0.808269 | 3.365640e-50 | -8.615850e-47 |
| Msa1004660 | Msa1356100 | 0.840491 | 8.423000e-58 | -8.615850e-47 |
| Msa1004660 | Msa1363310 | 0.827868 | 1.233198e-54 | -8.615850e-47 |
| Msa1004660 | Msa1372470 | 0.803544 | 3.313248e-49 | -8.615850e-47 |
| Msa1004660 | Msa1373310 | 0.803996 | 2.670110e-49 | -8.615850e-47 |
| Msa1004660 | Msa1373420 | 0.801663 | 8.096498e-49 | -8.615850e-47 |
| Msa1004660 | Msa1377980 | 0.805739 | 1.154006e-49 | -8.615850e-47 |
| Msa1004660 | Msa1380180 | 0.824977 | 6.024952e-54 | -8.615850e-47 |
| Msa1004660 | Msa1384410 | 0.843738 | 1.165086e-58 | -8.615850e-47 |
| Msa1004660 | Msa1386580 | 0.828166 | 1.045618e-54 | -8.615850e-47 |
| Msa1004660 | Msa1386910 | 0.828335 | 9.516967e-55 | -8.615850e-47 |
| Msa1004660 | Msa1388720 | 0.833395 | 5.466038e-56 | -8.615850e-47 |
| Msa1004660 | Msa1389670 | 0.861303 | 1.127586e-63 | -8.615850e-47 |
| Msa1004660 | Msa1395360 | 0.814245 | 1.699425e-51 | -8.615850e-47 |
| Msa1004660 | Msa1395380 | 0.808557 | 2.920830e-50 | -8.615850e-47 |
| Msa1004660 | Msa1397560 | 0.840717 | 7.349871e-58 | -8.615850e-47 |
| Msa1004660 | Msa1408230 | 0.808683 | 2.745203e-50 | -8.615850e-47 |
| Msa1004660 | Msa1408280 | 0.804836 | 1.783786e-49 | -8.615850e-47 |
| Msa1004660 | Msa1409360 | 0.803535 | 3.328878e-49 | -8.615850e-47 |
| Msa1004660 | Msa1410480 | 0.852843 | 3.537152e-61 | -8.615850e-47 |
| Msa1004660 | Msa1410500 | 0.841900 | 3.588325e-58 | -8.615850e-47 |
| Msa1004660 | Msa1412800 | 0.800305 | 1.534151e-48 | -8.615850e-47 |
| Msa1004660 | Msa1415510 | 0.817494 | 3.203498e-52 | -8.615850e-47 |
| Msa1004660 | Msa1421520 | 0.864926 | 8.553315e-65 | -8.615850e-47 |
| Msa1004660 | Msa1423560 | 0.809056 | 2.284568e-50 | -8.615850e-47 |
| Msa1004660 | Msa1424490 | 0.826818 | 2.202091e-54 | -8.615850e-47 |
| Msa1004660 | Msa1432730 | 0.821599 | 3.706120e-53 | -8.615850e-47 |
| Msa1004660 | Msa1444130 | 0.828957 | 6.733502e-55 | -8.615850e-47 |
| Msa1004660 | Msa1444690 | 0.809769 | 1.606382e-50 | -8.615850e-47 |
| Msa1004660 | Msa1454300 | 0.813188 | 2.904313e-51 | -8.615850e-47 |
| Msa1004660 | Msa1459130 | 0.816049 | 6.754728e-52 | -8.615850e-47 |
| Msa1004660 | Msa1461840 | 0.822173 | 2.729020e-53 | -8.615850e-47 |
| Msa1004660 | Msa1464470 | 0.819869 | 9.260635e-53 | -8.615850e-47 |
| Msa0240630 | Msa1004660 | 0.813557 | 2.409328e-51 | -8.615850e-47 |
| Msa0253230 | Msa1004660 | 0.819181 | 1.328762e-52 | -8.615850e-47 |
| Msa0261350 | Msa1004660 | 0.837543 | 4.886033e-57 | -8.615850e-47 |
| Msa0278340 | Msa1004660 | 0.811843 | 5.716624e-51 | -8.615850e-47 |
| Msa0299130 | Msa1004660 | 0.826700 | 2.348613e-54 | -8.615850e-47 |
| Msa0304350 | Msa1004660 | 0.808174 | 3.526429e-50 | -8.615850e-47 |
| Msa0305910 | Msa1004660 | 0.807155 | 5.804300e-50 | -8.615850e-47 |
| Msa0326170 | Msa1004660 | 0.814962 | 1.179444e-51 | -8.615850e-47 |
| Msa0331070 | Msa1004660 | 0.813697 | 2.245114e-51 | -8.615850e-47 |
| Msa0334450 | Msa1004660 | 0.852126 | 5.664766e-61 | -8.615850e-47 |
| Msa0340700 | Msa1004660 | 0.832126 | 1.129294e-55 | -8.615850e-47 |
| Msa0340830 | Msa1004660 | 0.802648 | 5.078248e-49 | -8.615850e-47 |
| Msa0355630 | Msa1004660 | 0.814563 | 1.445642e-51 | -8.615850e-47 |
| Msa0363180 | Msa1004660 | 0.823682 | 1.214787e-53 | -8.615850e-47 |
| Msa0364030 | Msa1004660 | 0.801003 | 1.105207e-48 | -8.615850e-47 |
| Msa0497140 | Msa1004660 | 0.812452 | 4.209441e-51 | -8.615850e-47 |
| Msa0502900 | Msa1004660 | 0.825292 | 5.075207e-54 | -8.615850e-47 |
| Msa0506090 | Msa1004660 | 0.803064 | 4.167276e-49 | -8.615850e-47 |
| Msa0507960 | Msa1004660 | 0.835748 | 1.400593e-56 | -8.615850e-47 |
| Msa0516000 | Msa1004660 | 0.812980 | 3.226265e-51 | -8.615850e-47 |
| Msa0521260 | Msa1004660 | 0.829815 | 4.168759e-55 | -8.615850e-47 |
| Msa0523140 | Msa1004660 | 0.801298 | 9.617374e-49 | -8.615850e-47 |
| Msa0523150 | Msa1004660 | 0.814918 | 1.206156e-51 | -8.615850e-47 |
| Msa0526520 | Msa1004660 | 0.824756 | 6.793116e-54 | -8.615850e-47 |
| Msa0526840 | Msa1004660 | 0.806266 | 8.940952e-50 | -8.615850e-47 |
| Msa0532870 | Msa1004660 | 0.800007 | 1.763656e-48 | -8.615850e-47 |
| Msa0533610 | Msa1004660 | 0.848187 | 7.191017e-60 | -8.615850e-47 |
| Msa0539570 | Msa1004660 | 0.806307 | 8.766487e-50 | -8.615850e-47 |
| Msa0544390 | Msa1004660 | 0.812295 | 4.555499e-51 | -8.615850e-47 |
| Msa0545750 | Msa1004660 | 0.847571 | 1.063186e-59 | -8.615850e-47 |
| Msa0550810 | Msa1004660 | 0.803800 | 2.932951e-49 | -8.615850e-47 |
| Msa0550980 | Msa1004660 | 0.825380 | 4.839039e-54 | -8.615850e-47 |
| Msa0550990 | Msa1004660 | 0.832672 | 8.270559e-56 | -8.615850e-47 |
| Msa0554770 | Msa1004660 | 0.805435 | 1.337119e-49 | -8.615850e-47 |
| Msa0557440 | Msa1004660 | 0.828504 | 8.664388e-55 | -8.615850e-47 |
| Msa0559440 | Msa1004660 | 0.845525 | 3.846030e-59 | -8.615850e-47 |
| Msa0559640 | Msa1004660 | 0.849678 | 2.770850e-60 | -8.615850e-47 |
| Msa0563230 | Msa1004660 | 0.801142 | 1.035240e-48 | -8.615850e-47 |
| Msa0564580 | Msa1004660 | 0.819430 | 1.166556e-52 | -8.615850e-47 |
| Msa0571900 | Msa1004660 | 0.836300 | 1.014442e-56 | -8.615850e-47 |
| Msa0572730 | Msa1004660 | 0.804396 | 2.204000e-49 | -8.615850e-47 |
| Msa0575960 | Msa1004660 | 0.815599 | 8.514131e-52 | -8.615850e-47 |
| Msa0576020 | Msa1004660 | 0.801299 | 9.613978e-49 | -8.615850e-47 |
| Msa0577290 | Msa1004660 | 0.821166 | 4.665367e-53 | -8.615850e-47 |
| Msa0577960 | Msa1004660 | 0.806278 | 8.891954e-50 | -8.615850e-47 |
| Msa0580890 | Msa1004660 | 0.808783 | 2.613780e-50 | -8.615850e-47 |
| Msa0582270 | Msa1004660 | 0.827156 | 1.828300e-54 | -8.615850e-47 |
| Msa0583270 | Msa1004660 | 0.813464 | 2.525783e-51 | -8.615850e-47 |
| Msa0588110 | Msa1004660 | 0.807915 | 4.003775e-50 | -8.615850e-47 |
| Msa0589930 | Msa1004660 | 0.811936 | 5.454514e-51 | -8.615850e-47 |
| Msa0862750 | Msa1004660 | 0.815898 | 7.302834e-52 | -8.615850e-47 |
| Msa0869320 | Msa1004660 | 0.852534 | 4.333276e-61 | -8.615850e-47 |
| Msa0869420 | Msa1004660 | 0.800643 | 1.308980e-48 | -8.615850e-47 |
| Msa0870220 | Msa1004660 | 0.828610 | 8.171403e-55 | -8.615850e-47 |
| Msa0888520 | Msa1004660 | 0.804851 | 1.771423e-49 | -8.615850e-47 |
| Msa0903460 | Msa1004660 | 0.833579 | 4.918975e-56 | -8.615850e-47 |
| Msa0906100 | Msa1004660 | 0.827535 | 1.482713e-54 | -8.615850e-47 |
| Msa0934290 | Msa1004660 | 0.853997 | 1.649939e-61 | -8.615850e-47 |
| Msa0935930 | Msa1004660 | 0.843880 | 1.067475e-58 | -8.615850e-47 |
| Msa0945160 | Msa1004660 | 0.811787 | 5.878313e-51 | -8.615850e-47 |
| Msa0945520 | Msa1004660 | 0.841122 | 5.753828e-58 | -8.615850e-47 |
| Msa0947550 | Msa1004660 | 0.816916 | 4.321947e-52 | -8.615850e-47 |
| Msa0956600 | Msa1004660 | 0.832501 | 9.118235e-56 | -8.615850e-47 |
| Msa0963800 | Msa1004660 | 0.800431 | 1.445621e-48 | -8.615850e-47 |
| Msa0971690 | Msa1004660 | 0.810726 | 9.985748e-51 | -8.615850e-47 |
| Msa0971780 | Msa1004660 | 0.856751 | 2.602371e-62 | -8.615850e-47 |
| Msa0972930 | Msa1004660 | 0.827581 | 1.445917e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004660 | MtrunA17_Chr7g0214761 | 92.135 | 178 | 14 | 0 | 1 | 178 | 1 | 178 | 1.28e-122 | 343 |
| Msa1004660 | MtrunA17_Chr7g0214771 | 92.135 | 178 | 14 | 0 | 1 | 178 | 1 | 178 | 1.36e-121 | 340 |
| Msa1004660 | MtrunA17_Chr6g0461711 | 69.318 | 176 | 53 | 1 | 1 | 176 | 1 | 175 | 2.65e-88 | 256 |
| Msa1004660 | MtrunA17_Chr7g0252784 | 70.690 | 174 | 50 | 1 | 1 | 174 | 1 | 173 | 3.37e-88 | 256 |
| Msa1004660 | MtrunA17_Chr7g0252800 | 65.476 | 168 | 57 | 1 | 7 | 174 | 8 | 174 | 6.03e-79 | 232 |
| Msa1004660 | MtrunA17_Chr7g0252811 | 63.804 | 163 | 57 | 2 | 13 | 175 | 35 | 195 | 5.66e-74 | 220 |
| Msa1004660 | MtrunA17_Chr6g0472451 | 53.801 | 171 | 78 | 1 | 4 | 174 | 3 | 172 | 1.43e-64 | 196 |
| Msa1004660 | MtrunA17_Chr7g0266201 | 53.801 | 171 | 77 | 2 | 5 | 174 | 5 | 174 | 1.33e-62 | 191 |
| Msa1004660 | MtrunA17_Chr1g0178751 | 52.500 | 160 | 73 | 2 | 7 | 164 | 7 | 165 | 2.11e-59 | 183 |
| Msa1004660 | MtrunA17_Chr2g0321301 | 47.337 | 169 | 87 | 2 | 7 | 174 | 6 | 173 | 5.56e-57 | 176 |
| Msa1004660 | MtrunA17_Chr8g0392741 | 50.888 | 169 | 80 | 3 | 1 | 168 | 1 | 167 | 3.93e-49 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004660 | AT1G65480.1 | 65.909 | 176 | 59 | 1 | 1 | 176 | 1 | 175 | 2.43e-87 | 254 |
| Msa1004660 | AT1G65480.2 | 65.909 | 176 | 59 | 1 | 1 | 176 | 45 | 219 | 3.24e-87 | 255 |
| Msa1004660 | AT4G20370.1 | 66.286 | 175 | 58 | 1 | 1 | 175 | 1 | 174 | 4.29e-85 | 248 |
| Msa1004660 | AT5G62040.1 | 53.571 | 168 | 77 | 1 | 4 | 170 | 3 | 170 | 1.17e-63 | 194 |
| Msa1004660 | AT5G03840.1 | 52.841 | 176 | 79 | 3 | 1 | 174 | 4 | 177 | 2.16e-61 | 188 |
| Msa1004660 | AT2G27550.1 | 49.708 | 171 | 85 | 1 | 5 | 174 | 5 | 175 | 1.78e-60 | 186 |
| Msa1004660 | AT1G18100.1 | 51.163 | 172 | 80 | 3 | 5 | 174 | 4 | 173 | 6.57e-51 | 161 |
Find 69 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTTGATAATTTGCTTAT+TGG | 0.192847 | 7_1:+2255546 | None:intergenic |
| TTCAATTGTCAACGAGAAAA+TGG | 0.223614 | 7_1:-2252969 | Msa1004660:CDS |
| CTTGTGGTTTGTGGTGTAAT+TGG | 0.261555 | 7_1:-2255486 | Msa1004660:CDS |
| TTTGCAGAAGTTTACAATCT+TGG | 0.279344 | 7_1:-2253014 | Msa1004660:CDS |
| AATTTGTATCTTATTTGATT+TGG | 0.312640 | 7_1:-2252480 | Msa1004660:three_prime_UTR |
| TGGTGTAATTGGAGATGTTT+TGG | 0.321102 | 7_1:-2255475 | Msa1004660:CDS |
| GTGTGATATTTGTGTTGTTT+AGG | 0.376720 | 7_1:-2253097 | Msa1004660:CDS |
| CCCCGTAGTAGCTGGAATAT+TGG | 0.377807 | 7_1:+2253813 | None:intergenic |
| TTGAAGGACAAGGATATGTT+TGG | 0.387675 | 7_1:+2252887 | None:intergenic |
| TTTCCACCAACTTGAACTCT+TGG | 0.407751 | 7_1:+2255354 | None:intergenic |
| GTCATTTGCTTGAGATGGAT+TGG | 0.409768 | 7_1:-2252630 | Msa1004660:three_prime_UTR |
| TTACAAATTCAGTGTCTTTG+AGG | 0.412870 | 7_1:-2255446 | Msa1004660:CDS |
| TTACTAGGGCTTGGTGCATC+AGG | 0.418391 | 7_1:+2254780 | None:intergenic |
| ATGAATCCTCTTGTGGTTTG+TGG | 0.422228 | 7_1:-2255495 | Msa1004660:CDS |
| TGTCAACGAGAAAATGGTTC+TGG | 0.429526 | 7_1:-2252963 | Msa1004660:CDS |
| CCACCAACTTGAACTCTTGG+TGG | 0.429744 | 7_1:+2255357 | None:intergenic |
| CACCAACTTGAACTCTTGGT+GGG | 0.432832 | 7_1:+2255358 | None:intergenic |
| TACAAATTCAGTGTCTTTGA+GGG | 0.441798 | 7_1:-2255445 | Msa1004660:CDS |
| GTAACAATAATCTAAACATT+TGG | 0.443901 | 7_1:-2252922 | Msa1004660:exon |
| TGTTGTTTAGGCAACCTTGT+AGG | 0.444815 | 7_1:-2253085 | Msa1004660:CDS |
| GCCCTAGTAACCCGACTATG+AGG | 0.448204 | 7_1:-2254767 | Msa1004660:CDS |
| AAAGACACTGAATTTGTAAA+GGG | 0.449639 | 7_1:+2255450 | None:intergenic |
| CCCTCATAGTCGGGTTACTA+GGG | 0.451139 | 7_1:+2254766 | None:intergenic |
| AACGTTGTCCCCGTAGTAGC+TGG | 0.452584 | 7_1:+2253805 | None:intergenic |
| TGAATCCCTGATGTTGGTCT+TGG | 0.453418 | 7_1:+2253122 | None:intergenic |
| AATTCGTCATTTGCTTGAGA+TGG | 0.461753 | 7_1:-2252635 | Msa1004660:three_prime_UTR |
| CTATGAGGGAATACCTGTAT+TGG | 0.464941 | 7_1:-2254752 | Msa1004660:intron |
| TTGTCAGAGCATCCTCTCAA+TGG | 0.465122 | 7_1:+2252589 | None:intergenic |
| CAAAGACACTGAATTTGTAA+AGG | 0.477373 | 7_1:+2255449 | None:intergenic |
| GAAAGTCCAAGACCAACATC+AGG | 0.479268 | 7_1:-2253128 | Msa1004660:CDS |
| TTCATAAATAATCAACTAAG+AGG | 0.483623 | 7_1:+2252549 | None:intergenic |
| TTGAAATAGAGAGCAGCAAC+AGG | 0.483630 | 7_1:+2252987 | None:intergenic |
| AACCAATATTCCAGCTACTA+CGG | 0.486996 | 7_1:-2253815 | Msa1004660:CDS |
| TCCCTCATAGTCGGGTTACT+AGG | 0.493000 | 7_1:+2254765 | None:intergenic |
| ACCAATATTCCAGCTACTAC+GGG | 0.499624 | 7_1:-2253814 | Msa1004660:CDS |
| GGAGGAAATAATGAGTCCTC+GGG | 0.501866 | 7_1:-2252679 | Msa1004660:three_prime_UTR |
| TAGTTCCCACTTACCAATAC+AGG | 0.507722 | 7_1:+2254739 | None:intergenic |
| ATAGTCGGGTTACTAGGGCT+TGG | 0.513582 | 7_1:+2254771 | None:intergenic |
| TAAATCAATGAATCCTCTTG+TGG | 0.519287 | 7_1:-2255502 | Msa1004660:CDS |
| ACAGGTATTCCCTCATAGTC+GGG | 0.521375 | 7_1:+2254757 | None:intergenic |
| GCTACTACGGGGACAACGTT+CGG | 0.524322 | 7_1:-2253802 | Msa1004660:intron |
| AGGCACAATATATTAGCTCC+TGG | 0.525696 | 7_1:-2253065 | Msa1004660:CDS |
| TGGTGGGTTGACTATTTGAG+AGG | 0.531184 | 7_1:+2255374 | None:intergenic |
| AGGAGGAAATAATGAGTCCT+CGG | 0.536424 | 7_1:-2252680 | Msa1004660:three_prime_UTR |
| CCACCAAGAGTTCAAGTTGG+TGG | 0.537101 | 7_1:-2255357 | Msa1004660:CDS |
| AAGTTGGTGGAAATGACCTC+AGG | 0.538516 | 7_1:-2255344 | Msa1004660:CDS |
| TACAGGTATTCCCTCATAGT+CGG | 0.540396 | 7_1:+2254756 | None:intergenic |
| GGTGGGTTGACTATTTGAGA+GGG | 0.541792 | 7_1:+2255375 | None:intergenic |
| GAGAAAATGGTTCTGGTGGA+AGG | 0.541973 | 7_1:-2252956 | Msa1004660:CDS |
| GCTAATATATTGTGCCTACA+AGG | 0.564781 | 7_1:+2253071 | None:intergenic |
| TAAATTAATGTTAATCAGCA+AGG | 0.565532 | 7_1:-2252700 | Msa1004660:three_prime_UTR |
| CAACGAGAAAATGGTTCTGG+TGG | 0.575115 | 7_1:-2252960 | Msa1004660:CDS |
| ACACGATGAATCCCTGATGT+TGG | 0.591037 | 7_1:+2253116 | None:intergenic |
| CCCTAGTAACCCGACTATGA+GGG | 0.593212 | 7_1:-2254766 | Msa1004660:CDS |
| TGGTTCTGGTGGAAGGAGGA+TGG | 0.594121 | 7_1:-2252949 | Msa1004660:CDS |
| AATAAGTCTCTAATTTGAGT+CGG | 0.604020 | 7_1:+2252520 | None:intergenic |
| ATTACACCACAAACCACAAG+AGG | 0.610357 | 7_1:+2255489 | None:intergenic |
| ACAATATATTAGCTCCTGGA+TGG | 0.617111 | 7_1:-2253061 | Msa1004660:CDS |
| AAAGTCCAAGACCAACATCA+GGG | 0.617461 | 7_1:-2253127 | Msa1004660:CDS |
| TTGTTAGACAAACCATTGAG+AGG | 0.619851 | 7_1:-2252601 | Msa1004660:three_prime_UTR |
| CCTCAGGACTCTATACACTC+TGG | 0.640356 | 7_1:-2255328 | Msa1004660:intron |
| AAAATGGTTCTGGTGGAAGG+AGG | 0.645300 | 7_1:-2252953 | Msa1004660:CDS |
| AACCCACCAAGAGTTCAAGT+TGG | 0.662077 | 7_1:-2255360 | Msa1004660:CDS |
| AACAAAGAAGTCATCAACAG+TGG | 0.676788 | 7_1:-2255408 | Msa1004660:CDS |
| GAGGAAATAATGAGTCCTCG+GGG | 0.679259 | 7_1:-2252678 | Msa1004660:three_prime_UTR |
| ATTAATGTTAATCAGCAAGG+AGG | 0.685191 | 7_1:-2252697 | Msa1004660:three_prime_UTR |
| CCAATATTCCAGCTACTACG+GGG | 0.711639 | 7_1:-2253813 | Msa1004660:CDS |
| CCAGAGTGTATAGAGTCCTG+AGG | 0.732541 | 7_1:+2255328 | None:intergenic |
| AGGAAATAATGAGTCCTCGG+GGG | 0.734529 | 7_1:-2252677 | Msa1004660:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTAAAATAATTTATAGAA+TGG | - | chr7_1:2253393-2253412 | Msa1004660:intron | 10.0% |
| !! | TTAATATTCAAATTTAACAT+TGG | + | chr7_1:2254395-2254414 | None:intergenic | 10.0% |
| !! | TTAATGTATGTATAAATATA+TGG | - | chr7_1:2254812-2254831 | Msa1004660:intron | 10.0% |
| !!! | AGTTTTTTATTTTATTTGAA+AGG | + | chr7_1:2255218-2255237 | None:intergenic | 10.0% |
| !!! | GATAATAGTATTTTTTTTTT+GGG | + | chr7_1:2255268-2255287 | None:intergenic | 10.0% |
| !!! | TGATAATAGTATTTTTTTTT+TGG | + | chr7_1:2255269-2255288 | None:intergenic | 10.0% |
| !! | AAAGAATTACCATATATAAA+TGG | - | chr7_1:2252761-2252780 | Msa1004660:three_prime_UTR | 15.0% |
| !!! | AAAATTTATTTTCAAGTTTG+GGG | + | chr7_1:2252920-2252939 | None:intergenic | 15.0% |
| !!! | GAAAATTTATTTTCAAGTTT+GGG | + | chr7_1:2252921-2252940 | None:intergenic | 15.0% |
| !!! | TGAAAATTTATTTTCAAGTT+TGG | + | chr7_1:2252922-2252941 | None:intergenic | 15.0% |
| !!! | TTTTGCAATATGTATTATTT+GGG | + | chr7_1:2252959-2252978 | None:intergenic | 15.0% |
| !!! | ATTTTGCAATATGTATTATT+TGG | + | chr7_1:2252960-2252979 | None:intergenic | 15.0% |
| !!! | TGTTTTTTTTTTCATTTCAA+GGG | + | chr7_1:2253033-2253052 | None:intergenic | 15.0% |
| !! | AAATGAAAAAAAAAACAGTT+AGG | - | chr7_1:2253036-2253055 | Msa1004660:CDS | 15.0% |
| !! | TATAAAAAAAAAGTCGAAAA+TGG | - | chr7_1:2253826-2253845 | Msa1004660:intron | 15.0% |
| !!! | TTTATTTATTTTTCATGAGT+CGG | + | chr7_1:2254344-2254363 | None:intergenic | 15.0% |
| !!! | TAGTGTATATTTTATATTGA+AGG | + | chr7_1:2255133-2255152 | None:intergenic | 15.0% |
| !!! | AATTTGTATCTTATTTGATT+TGG | - | chr7_1:2255521-2255540 | Msa1004660:exon | 15.0% |
| !!! | GTTGATCAAATTAAAGTTTT+TGG | + | chr7_1:2252877-2252896 | None:intergenic | 20.0% |
| !!! | AAATTTATTTTCAAGTTTGG+GGG | + | chr7_1:2252919-2252938 | None:intergenic | 20.0% |
| !!! | CTGTTTTTTTTTTCATTTCA+AGG | + | chr7_1:2253034-2253053 | None:intergenic | 20.0% |
| !! | CATACAAATTAAACCTAATT+GGG | - | chr7_1:2253095-2253114 | Msa1004660:CDS | 20.0% |
| !!! | AAATTATGAACCCAATTTTA+AGG | - | chr7_1:2254280-2254299 | Msa1004660:intron | 20.0% |
| !! | ATTACAACAAGGATATAAAT+GGG | + | chr7_1:2254314-2254333 | None:intergenic | 20.0% |
| !! | TATTACAACAAGGATATAAA+TGG | + | chr7_1:2254315-2254334 | None:intergenic | 20.0% |
| !!! | TTGAGCTTACATTTTTTTTA+CGG | - | chr7_1:2254428-2254447 | Msa1004660:intron | 20.0% |
| !!! | TTATATTTTTTTGACTGATG+AGG | - | chr7_1:2254580-2254599 | Msa1004660:intron | 20.0% |
| !! | GTAACAATAATCTAAACATT+TGG | - | chr7_1:2255079-2255098 | Msa1004660:intron | 20.0% |
| !!! | ATATTTTATATTGAAGGACA+AGG | + | chr7_1:2255127-2255146 | None:intergenic | 20.0% |
| !! | TAAATTAATGTTAATCAGCA+AGG | - | chr7_1:2255301-2255320 | Msa1004660:intron | 20.0% |
| !! | TTCATAAATAATCAACTAAG+AGG | + | chr7_1:2255455-2255474 | None:intergenic | 20.0% |
| !!! | ATACAAATTTTTCATAGCAT+CGG | + | chr7_1:2255510-2255529 | None:intergenic | 20.0% |
| !!! | TGCTTTGATAATTTGCTTAT+TGG | + | chr7_1:2252458-2252477 | None:intergenic | 25.0% |
| ! | AAAGACACTGAATTTGTAAA+GGG | + | chr7_1:2252554-2252573 | None:intergenic | 25.0% |
| !!! | TCAAATTAAAGTTTTTGGCT+AGG | + | chr7_1:2252872-2252891 | None:intergenic | 25.0% |
| !!! | AATTTATTTTCAAGTTTGGG+GGG | + | chr7_1:2252918-2252937 | None:intergenic | 25.0% |
| !!! | ATTAGGTTTAATTTGTATGG+AGG | + | chr7_1:2253094-2253113 | None:intergenic | 25.0% |
| !!! | CCAATTAGGTTTAATTTGTA+TGG | + | chr7_1:2253097-2253116 | None:intergenic | 25.0% |
| ! | CCATACAAATTAAACCTAAT+TGG | - | chr7_1:2253094-2253113 | Msa1004660:CDS | 25.0% |
| ! | TATTAAGAATGATCCCAATT+AGG | + | chr7_1:2253111-2253130 | None:intergenic | 25.0% |
| !! | ATTAAAGCCTTTTCTTTCTA+GGG | - | chr7_1:2253158-2253177 | Msa1004660:intron | 25.0% |
| ! | AATATTTAACAAGCCCATAT+GGG | + | chr7_1:2253288-2253307 | None:intergenic | 25.0% |
| ! | AAATATTTAACAAGCCCATA+TGG | + | chr7_1:2253289-2253308 | None:intergenic | 25.0% |
| ! | TTCATTGACAAAATGAAACA+AGG | - | chr7_1:2253599-2253618 | Msa1004660:intron | 25.0% |
| ! | AACATGATATAGTTCATGTT+TGG | - | chr7_1:2253651-2253670 | Msa1004660:intron | 25.0% |
| !!! | AACCCAATTTTAAGGATAAA+CGG | - | chr7_1:2254288-2254307 | Msa1004660:intron | 25.0% |
| !!! | CTTACATTTTTTTTACGGAT+GGG | - | chr7_1:2254433-2254452 | Msa1004660:intron | 25.0% |
| !!! | TTACATTTTTTTTACGGATG+GGG | - | chr7_1:2254434-2254453 | Msa1004660:intron | 25.0% |
| !!! | TTACATTTTTTTGACTGATG+AGG | - | chr7_1:2254507-2254526 | Msa1004660:intron | 25.0% |
| ! | AAGTATAGATTTCTGAATGT+TGG | + | chr7_1:2254658-2254677 | None:intergenic | 25.0% |
| ! | ATGGTGTTTGAATTAATTGT+AGG | - | chr7_1:2254831-2254850 | Msa1004660:intron | 25.0% |
| ! | AATAAGTCTCTAATTTGAGT+CGG | + | chr7_1:2255484-2255503 | None:intergenic | 25.0% |
| TAAATCAATGAATCCTCTTG+TGG | - | chr7_1:2252499-2252518 | Msa1004660:three_prime_UTR | 30.0% | |
| CAAAGACACTGAATTTGTAA+AGG | + | chr7_1:2252555-2252574 | None:intergenic | 30.0% | |
| TTACAAATTCAGTGTCTTTG+AGG | - | chr7_1:2252555-2252574 | Msa1004660:three_prime_UTR | 30.0% | |
| TACAAATTCAGTGTCTTTGA+GGG | - | chr7_1:2252556-2252575 | Msa1004660:three_prime_UTR | 30.0% | |
| TACCCCTTAAGAGAAAATTA+GGG | - | chr7_1:2252806-2252825 | Msa1004660:three_prime_UTR | 30.0% | |
| ! | TGACCCTAATTTTCTCTTAA+GGG | + | chr7_1:2252812-2252831 | None:intergenic | 30.0% |
| ! | TTGACCCTAATTTTCTCTTA+AGG | + | chr7_1:2252813-2252832 | None:intergenic | 30.0% |
| GGAATGGTTTATTCTATAAG+TGG | + | chr7_1:2252841-2252860 | None:intergenic | 30.0% | |
| !!! | TTTTTTCATTTCAAGGGTGT+TGG | + | chr7_1:2253027-2253046 | None:intergenic | 30.0% |
| !! | GTTTAATTTGTATGGAGGTA+AGG | + | chr7_1:2253089-2253108 | None:intergenic | 30.0% |
| ! | GATTAAAGCCTTTTCTTTCT+AGG | - | chr7_1:2253157-2253176 | Msa1004660:intron | 30.0% |
| TCAAAAACCCTAGAAAGAAA+AGG | + | chr7_1:2253168-2253187 | None:intergenic | 30.0% | |
| ! | GTTATAGTCTTACATAAGCA+TGG | + | chr7_1:2253352-2253371 | None:intergenic | 30.0% |
| ! | ATGCTTAATTTTGTGTCAAC+TGG | - | chr7_1:2253899-2253918 | Msa1004660:intron | 30.0% |
| AGACAGTGAGAATAAAGTAT+GGG | + | chr7_1:2253975-2253994 | None:intergenic | 30.0% | |
| TAGACAGTGAGAATAAAGTA+TGG | + | chr7_1:2253976-2253995 | None:intergenic | 30.0% | |
| GTATACATATGTGTGTGATT+TGG | - | chr7_1:2254084-2254103 | Msa1004660:intron | 30.0% | |
| !! | GTGATTTGGAAACTTTTGTT+TGG | - | chr7_1:2254098-2254117 | Msa1004660:intron | 30.0% |
| !!! | TTTTTTTTTCCTTCCTTCGT+TGG | - | chr7_1:2254145-2254164 | Msa1004660:intron | 30.0% |
| ATTGGTTACCATCCTAATTA+AGG | + | chr7_1:2254173-2254192 | None:intergenic | 30.0% | |
| TCGGAACTATTATTACAACA+AGG | + | chr7_1:2254325-2254344 | None:intergenic | 30.0% | |
| !!! | GCTTACATTTTTTTTACGGA+TGG | - | chr7_1:2254432-2254451 | Msa1004660:intron | 30.0% |
| !!! | ATTTTTTTGACTGATGAGGA+TGG | - | chr7_1:2254511-2254530 | Msa1004660:intron | 30.0% |
| !!! | ATTTTTTTGACTGATGAGGA+TGG | - | chr7_1:2254511-2254530 | Msa1004660:intron | 30.0% |
| !! | GTGTGATATTTGTGTTGTTT+AGG | - | chr7_1:2254904-2254923 | Msa1004660:intron | 30.0% |
| TTTGCAGAAGTTTACAATCT+TGG | - | chr7_1:2254987-2255006 | Msa1004660:intron | 30.0% | |
| TTCAATTGTCAACGAGAAAA+TGG | - | chr7_1:2255032-2255051 | Msa1004660:intron | 30.0% | |
| ATTAATGTTAATCAGCAAGG+AGG | - | chr7_1:2255304-2255323 | Msa1004660:intron | 30.0% | |
| ! | TGGTGTAATTGGAGATGTTT+TGG | - | chr7_1:2252526-2252545 | Msa1004660:three_prime_UTR | 35.0% |
| AACAAAGAAGTCATCAACAG+TGG | - | chr7_1:2252593-2252612 | Msa1004660:three_prime_UTR | 35.0% | |
| TTCGGGGATCCATTTATATA+TGG | + | chr7_1:2252773-2252792 | None:intergenic | 35.0% | |
| GTAGCTTTCTTATATCTTCG+GGG | + | chr7_1:2252789-2252808 | None:intergenic | 35.0% | |
| GGTAGCTTTCTTATATCTTC+GGG | + | chr7_1:2252790-2252809 | None:intergenic | 35.0% | |
| GGGTAGCTTTCTTATATCTT+CGG | + | chr7_1:2252791-2252810 | None:intergenic | 35.0% | |
| CTACCCCTTAAGAGAAAATT+AGG | - | chr7_1:2252805-2252824 | Msa1004660:three_prime_UTR | 35.0% | |
| ! | GACCCTAATTTTCTCTTAAG+GGG | + | chr7_1:2252811-2252830 | None:intergenic | 35.0% |
| !!! | TTCTAGGGTTTTTGAGTTTG+TGG | - | chr7_1:2253173-2253192 | Msa1004660:intron | 35.0% |
| ! | AGTTTGTGGCACTAATTTTC+AGG | - | chr7_1:2253187-2253206 | Msa1004660:intron | 35.0% |
| !!! | TGGCACTAATTTTCAGGTAA+TGG | - | chr7_1:2253193-2253212 | Msa1004660:intron | 35.0% |
| ! | GAATACCTGTATTGGTAAGT+GGG | - | chr7_1:2253257-2253276 | Msa1004660:intron | 35.0% |
| AGTAGTAAACTTGAGAACCT+AGG | + | chr7_1:2253431-2253450 | None:intergenic | 35.0% | |
| ! | ACTATCGGACTTAAGGATTT+TGG | + | chr7_1:2253532-2253551 | None:intergenic | 35.0% |
| TAGGATCATCCACTAACTAT+CGG | + | chr7_1:2253547-2253566 | None:intergenic | 35.0% | |
| AACCAATATTCCAGCTACTA+CGG | - | chr7_1:2254186-2254205 | Msa1004660:intron | 35.0% | |
| GGCCGTTTATCCTTAAAATT+GGG | + | chr7_1:2254293-2254312 | None:intergenic | 35.0% | |
| GCTAATATATTGTGCCTACA+AGG | + | chr7_1:2254933-2254952 | None:intergenic | 35.0% | |
| ACAATATATTAGCTCCTGGA+TGG | - | chr7_1:2254940-2254959 | Msa1004660:intron | 35.0% | |
| TTGAAGGACAAGGATATGTT+TGG | + | chr7_1:2255117-2255136 | None:intergenic | 35.0% | |
| AATTCGTCATTTGCTTGAGA+TGG | - | chr7_1:2255366-2255385 | Msa1004660:CDS | 35.0% | |
| TTGTTAGACAAACCATTGAG+AGG | - | chr7_1:2255400-2255419 | Msa1004660:CDS | 35.0% | |
| ! | TTGGTTGTACGTGTTTTACT+AGG | - | chr7_1:2255540-2255559 | Msa1004660:five_prime_UTR | 35.0% |
| ATGAATCCTCTTGTGGTTTG+TGG | - | chr7_1:2252506-2252525 | Msa1004660:three_prime_UTR | 40.0% | |
| ATTACACCACAAACCACAAG+AGG | + | chr7_1:2252515-2252534 | None:intergenic | 40.0% | |
| ! | CTTGTGGTTTGTGGTGTAAT+TGG | - | chr7_1:2252515-2252534 | Msa1004660:three_prime_UTR | 40.0% |
| TTTCCACCAACTTGAACTCT+TGG | + | chr7_1:2252650-2252669 | None:intergenic | 40.0% | |
| !!! | GTTTTTGGCTAGGACAAAGA+AGG | + | chr7_1:2252862-2252881 | None:intergenic | 40.0% |
| !! | TTTCATTTCAAGGGTGTTGG+AGG | + | chr7_1:2253024-2253043 | None:intergenic | 40.0% |
| TACAGGTATTCCCTCATAGT+CGG | + | chr7_1:2253248-2253267 | None:intergenic | 40.0% | |
| CTATGAGGGAATACCTGTAT+TGG | - | chr7_1:2253249-2253268 | Msa1004660:intron | 40.0% | |
| ! | GGAATACCTGTATTGGTAAG+TGG | - | chr7_1:2253256-2253275 | Msa1004660:intron | 40.0% |
| TAGTTCCCACTTACCAATAC+AGG | + | chr7_1:2253265-2253284 | None:intergenic | 40.0% | |
| TAAGTGGGAACTACCCATAT+GGG | - | chr7_1:2253272-2253291 | Msa1004660:intron | 40.0% | |
| CTTACATAAGCATGGTGTCT+TGG | + | chr7_1:2253344-2253363 | None:intergenic | 40.0% | |
| ! | AATGGCATACGCTATTTCCT+AGG | - | chr7_1:2253411-2253430 | Msa1004660:intron | 40.0% |
| TCCTTAAGTCCGATAGTTAG+TGG | - | chr7_1:2253535-2253554 | Msa1004660:intron | 40.0% | |
| TCCACTAACTATCGGACTTA+AGG | + | chr7_1:2253539-2253558 | None:intergenic | 40.0% | |
| CTTAACTAGTCACATGTGCT+TGG | + | chr7_1:2253628-2253647 | None:intergenic | 40.0% | |
| ATTAAGGATCCAACGAAGGA+AGG | + | chr7_1:2254157-2254176 | None:intergenic | 40.0% | |
| CCTAATTAAGGATCCAACGA+AGG | + | chr7_1:2254161-2254180 | None:intergenic | 40.0% | |
| CCTTCGTTGGATCCTTAATT+AGG | - | chr7_1:2254158-2254177 | Msa1004660:intron | 40.0% | |
| CGTTGGATCCTTAATTAGGA+TGG | - | chr7_1:2254162-2254181 | Msa1004660:intron | 40.0% | |
| ACCAATATTCCAGCTACTAC+GGG | - | chr7_1:2254187-2254206 | Msa1004660:intron | 40.0% | |
| GGTACGTGCAAAATTCTCTT+GGG | - | chr7_1:2254220-2254239 | Msa1004660:intron | 40.0% | |
| GGGCCGTTTATCCTTAAAAT+TGG | + | chr7_1:2254294-2254313 | None:intergenic | 40.0% | |
| AAAGTCCAAGACCAACATCA+GGG | - | chr7_1:2254874-2254893 | Msa1004660:intron | 40.0% | |
| ! | TGTTGTTTAGGCAACCTTGT+AGG | - | chr7_1:2254916-2254935 | Msa1004660:intron | 40.0% |
| AGGCACAATATATTAGCTCC+TGG | - | chr7_1:2254936-2254955 | Msa1004660:intron | 40.0% | |
| ! | TTGAAATTTTGTCGCCATCC+AGG | + | chr7_1:2254957-2254976 | None:intergenic | 40.0% |
| TTGAAATAGAGAGCAGCAAC+AGG | + | chr7_1:2255017-2255036 | None:intergenic | 40.0% | |
| TGTCAACGAGAAAATGGTTC+TGG | - | chr7_1:2255038-2255057 | Msa1004660:intron | 40.0% | |
| AGGAGGAAATAATGAGTCCT+CGG | - | chr7_1:2255321-2255340 | Msa1004660:intron | 40.0% | |
| GTCATTTGCTTGAGATGGAT+TGG | - | chr7_1:2255371-2255390 | Msa1004660:CDS | 40.0% | |
| !! | GGTGGGTTGACTATTTGAGA+GGG | + | chr7_1:2252629-2252648 | None:intergenic | 45.0% |
| !! | TGGTGGGTTGACTATTTGAG+AGG | + | chr7_1:2252630-2252649 | None:intergenic | 45.0% |
| AACCCACCAAGAGTTCAAGT+TGG | - | chr7_1:2252641-2252660 | Msa1004660:three_prime_UTR | 45.0% | |
| CACCAACTTGAACTCTTGGT+GGG | + | chr7_1:2252646-2252665 | None:intergenic | 45.0% | |
| !! | AAGTTGGTGGAAATGACCTC+AGG | - | chr7_1:2252657-2252676 | Msa1004660:three_prime_UTR | 45.0% |
| AGGACTCTATACACTCTGGT+TGG | - | chr7_1:2252677-2252696 | Msa1004660:three_prime_UTR | 45.0% | |
| TGGCTAGGACAAAGAAGGAA+TGG | + | chr7_1:2252857-2252876 | None:intergenic | 45.0% | |
| ACAGGTATTCCCTCATAGTC+GGG | + | chr7_1:2253247-2253266 | None:intergenic | 45.0% | |
| GTAAGTGGGAACTACCCATA+TGG | - | chr7_1:2253271-2253290 | Msa1004660:intron | 45.0% | |
| CCAATATTCCAGCTACTACG+GGG | - | chr7_1:2254188-2254207 | Msa1004660:intron | 45.0% | |
| CGGTACGTGCAAAATTCTCT+TGG | - | chr7_1:2254219-2254238 | Msa1004660:intron | 45.0% | |
| GAAAGTCCAAGACCAACATC+AGG | - | chr7_1:2254873-2254892 | Msa1004660:intron | 45.0% | |
| ! | TGAATCCCTGATGTTGGTCT+TGG | + | chr7_1:2254882-2254901 | None:intergenic | 45.0% |
| ACACGATGAATCCCTGATGT+TGG | + | chr7_1:2254888-2254907 | None:intergenic | 45.0% | |
| !! | CAACGAGAAAATGGTTCTGG+TGG | - | chr7_1:2255041-2255060 | Msa1004660:intron | 45.0% |
| !! | GAGAAAATGGTTCTGGTGGA+AGG | - | chr7_1:2255045-2255064 | Msa1004660:intron | 45.0% |
| !! | AAAATGGTTCTGGTGGAAGG+AGG | - | chr7_1:2255048-2255067 | Msa1004660:intron | 45.0% |
| GGAGGAAATAATGAGTCCTC+GGG | - | chr7_1:2255322-2255341 | Msa1004660:intron | 45.0% | |
| GAGGAAATAATGAGTCCTCG+GGG | - | chr7_1:2255323-2255342 | Msa1004660:intron | 45.0% | |
| AGGAAATAATGAGTCCTCGG+GGG | - | chr7_1:2255324-2255343 | Msa1004660:intron | 45.0% | |
| ! | TTGTCAGAGCATCCTCTCAA+TGG | + | chr7_1:2255415-2255434 | None:intergenic | 45.0% |
| !! | TAAAAAAAATATATATTACT+AGG | + | chr7_1:2253566-2253585 | None:intergenic | 5.0% |
| !!! | TACATATTTTTTTTTTTTTT+TGG | - | chr7_1:2253996-2254015 | Msa1004660:intron | 5.0% |
| !!! | ACATATTTTTTTTTTTTTTT+GGG | - | chr7_1:2253997-2254016 | Msa1004660:intron | 5.0% |
| CCACCAACTTGAACTCTTGG+TGG | + | chr7_1:2252647-2252666 | None:intergenic | 50.0% | |
| !! | CCACCAAGAGTTCAAGTTGG+TGG | - | chr7_1:2252644-2252663 | Msa1004660:three_prime_UTR | 50.0% |
| CCAGAGTGTATAGAGTCCTG+AGG | + | chr7_1:2252676-2252695 | None:intergenic | 50.0% | |
| CCTCAGGACTCTATACACTC+TGG | - | chr7_1:2252673-2252692 | Msa1004660:three_prime_UTR | 50.0% | |
| !! | CATTTCAAGGGTGTTGGAGG+CGG | + | chr7_1:2253021-2253040 | None:intergenic | 50.0% |
| !! | TTACTAGGGCTTGGTGCATC+AGG | + | chr7_1:2253224-2253243 | None:intergenic | 50.0% |
| ATAGTCGGGTTACTAGGGCT+TGG | + | chr7_1:2253233-2253252 | None:intergenic | 50.0% | |
| CCCTCATAGTCGGGTTACTA+GGG | + | chr7_1:2253238-2253257 | None:intergenic | 50.0% | |
| CCCTAGTAACCCGACTATGA+GGG | - | chr7_1:2253235-2253254 | Msa1004660:intron | 50.0% | |
| TCCCTCATAGTCGGGTTACT+AGG | + | chr7_1:2253239-2253258 | None:intergenic | 50.0% | |
| CCCCGTAGTAGCTGGAATAT+TGG | + | chr7_1:2254191-2254210 | None:intergenic | 50.0% | |
| AACTAAGCTCATATCCCCCG+AGG | + | chr7_1:2255341-2255360 | None:intergenic | 50.0% | |
| GCCCTAGTAACCCGACTATG+AGG | - | chr7_1:2253234-2253253 | Msa1004660:intron | 55.0% | |
| AACGTTGTCCCCGTAGTAGC+TGG | + | chr7_1:2254199-2254218 | None:intergenic | 55.0% | |
| GCTACTACGGGGACAACGTT+CGG | - | chr7_1:2254199-2254218 | Msa1004660:intron | 55.0% | |
| !! | TGGTTCTGGTGGAAGGAGGA+TGG | - | chr7_1:2255052-2255071 | Msa1004660:intron | 55.0% |
| !! | TCAAGGGTGTTGGAGGCGGC+TGG | + | chr7_1:2253017-2253036 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 2252455 | 2255568 | 2252455 | ID=Msa1004660;Name=Msa1004660 |
| chr7_1 | mRNA | 2252455 | 2255568 | 2252455 | ID=Msa1004660-mRNA-1;Parent=Msa1004660;Name=Msa1004660-mRNA-1;_AED=0.06;_eAED=0.06;_QI=36|1|1|1|1|1|4|486|178 |
| chr7_1 | exon | 2252455 | 2253170 | 2252455 | ID=Msa1004660-mRNA-1:exon:872;Parent=Msa1004660-mRNA-1 |
| chr7_1 | exon | 2253803 | 2253843 | 2253803 | ID=Msa1004660-mRNA-1:exon:871;Parent=Msa1004660-mRNA-1 |
| chr7_1 | exon | 2254753 | 2254814 | 2254753 | ID=Msa1004660-mRNA-1:exon:870;Parent=Msa1004660-mRNA-1 |
| chr7_1 | exon | 2255329 | 2255568 | 2255329 | ID=Msa1004660-mRNA-1:exon:869;Parent=Msa1004660-mRNA-1 |
| chr7_1 | five_prime_UTR | 2255533 | 2255568 | 2255533 | ID=Msa1004660-mRNA-1:five_prime_utr;Parent=Msa1004660-mRNA-1 |
| chr7_1 | CDS | 2255329 | 2255532 | 2255329 | ID=Msa1004660-mRNA-1:cds;Parent=Msa1004660-mRNA-1 |
| chr7_1 | CDS | 2254753 | 2254814 | 2254753 | ID=Msa1004660-mRNA-1:cds;Parent=Msa1004660-mRNA-1 |
| chr7_1 | CDS | 2253803 | 2253843 | 2253803 | ID=Msa1004660-mRNA-1:cds;Parent=Msa1004660-mRNA-1 |
| chr7_1 | CDS | 2252941 | 2253170 | 2252941 | ID=Msa1004660-mRNA-1:cds;Parent=Msa1004660-mRNA-1 |
| chr7_1 | three_prime_UTR | 2252455 | 2252940 | 2252455 | ID=Msa1004660-mRNA-1:three_prime_utr;Parent=Msa1004660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
