AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0414930


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414930 MtrunA17_Chr3g0108331 90.334 569 14 2 1 529 1 568 0.0 1044
Msa0414930 MtrunA17_Chr5g0432861 67.298 581 129 9 4 529 5 579 0.0 772
Msa0414930 MtrunA17_Chr5g0401451 38.173 613 280 10 8 527 24 630 7.29e-134 402
Msa0414930 MtrunA17_Chr4g0053841 37.500 600 288 10 12 529 1 595 2.46e-127 384
Msa0414930 MtrunA17_Chr4g0010091 36.585 574 276 12 8 500 16 582 1.22e-116 357
Msa0414930 MtrunA17_Chr1g0195911 34.910 613 298 17 7 529 20 621 8.73e-109 337
Msa0414930 MtrunA17_Chr7g0245201 34.247 584 304 9 23 529 60 640 1.81e-105 329
Msa0414930 MtrunA17_Chr7g0268781 33.388 611 301 17 7 524 20 617 4.19e-102 320
Msa0414930 MtrunA17_Chr2g0303541 33.846 585 288 12 11 498 12 594 2.00e-99 313
Msa0414930 MtrunA17_Chr8g0374011 32.815 643 296 15 16 524 11 651 1.09e-95 304
Msa0414930 MtrunA17_Chr2g0285511 32.855 557 261 10 11 461 12 561 1.71e-94 300
Msa0414930 MtrunA17_Chr1g0181181 34.624 465 244 8 18 424 20 482 7.15e-88 281
Msa0414930 MtrunA17_Chr8g0382231 30.948 517 277 6 24 469 52 559 3.96e-80 263
Msa0414930 MtrunA17_Chr2g0320691 31.206 564 291 13 3 471 2 563 4.36e-79 260
Msa0414930 MtrunA17_Chr5g0401341 33.621 464 237 8 23 421 26 483 1.72e-75 250
Msa0414930 MtrunA17_Chr1g0207461 31.158 475 252 9 21 426 25 493 2.59e-75 249
Msa0414930 MtrunA17_Chr1g0150191 32.218 478 254 8 11 420 12 487 3.79e-74 246
Msa0414930 MtrunA17_Chr4g0076521 31.004 458 256 5 20 421 22 475 5.65e-74 246
Msa0414930 MtrunA17_Chr1g0199631 32.244 459 230 7 42 424 8 461 1.01e-73 244
Msa0414930 MtrunA17_Chr5g0412591 33.333 489 236 8 19 430 21 496 2.68e-72 241
Msa0414930 MtrunA17_Chr1g0191711 29.320 515 300 9 1 471 34 528 3.40e-70 234
Msa0414930 MtrunA17_Chr8g0367891 33.054 478 257 7 27 443 29 504 6.97e-68 229
Msa0414930 MtrunA17_Chr2g0290741 29.011 455 253 7 23 421 25 465 1.68e-62 214
Msa0414930 MtrunA17_Chr2g0332281 37.615 218 127 1 210 427 91 299 7.89e-43 157
Msa0414930 MtrunA17_Chr4g0003891 31.715 309 159 4 157 422 15 314 1.08e-42 158
Msa0414930 MtrunA17_Chr4g0050021 37.559 213 105 3 13 198 33 244 9.02e-42 159
Msa0414930 MtrunA17_Chr4g0050021 32.288 319 185 7 211 502 326 640 4.83e-39 151
Msa0414930 MtrunA17_Chr2g0279481 37.327 217 105 3 12 198 32 247 1.92e-41 158
Msa0414930 MtrunA17_Chr2g0279481 31.875 320 188 4 210 502 330 646 1.83e-40 155
Msa0414930 MtrunA17_Chr4g0037661 25.612 531 286 13 33 468 13 529 7.34e-41 154
Msa0414930 MtrunA17_Chr4g0023801 25.692 506 294 13 33 469 14 506 2.42e-37 144
Msa0414930 MtrunA17_Chr1g0206621 44.079 152 80 3 28 178 72 219 4.57e-37 137
Msa0414930 MtrunA17_Chr1g0163311 27.099 524 269 17 34 470 14 511 1.82e-36 142
Msa0414930 MtrunA17_Chr2g0280541 26.133 375 200 12 92 407 2 358 1.56e-22 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0414930 AT2G30520.1 62.906 585 157 8 4 529 10 593 0.0 716
Msa0414930 AT2G30520.2 62.454 546 145 8 43 529 1 545 0.0 654
Msa0414930 AT2G30520.3 62.454 546 145 8 43 529 1 545 0.0 654
Msa0414930 AT5G67385.1 36.678 608 299 11 2 529 3 604 1.14e-122 373
Msa0414930 AT5G48800.1 37.345 565 276 12 7 500 22 579 5.64e-117 358
Msa0414930 AT1G03010.1 33.390 593 284 13 7 500 20 600 2.58e-105 329
Msa0414930 AT5G67385.4 35.044 565 281 11 45 529 1 559 2.77e-104 324
Msa0414930 AT5G67385.5 35.044 565 281 11 45 529 1 559 2.77e-104 324
Msa0414930 AT5G67385.2 35.044 565 281 11 45 529 1 559 2.77e-104 324
Msa0414930 AT5G67385.3 35.044 565 281 11 45 529 1 559 2.77e-104 324
Msa0414930 AT1G03010.2 33.622 577 273 12 23 500 8 573 7.15e-104 324
Msa0414930 AT1G03010.3 33.622 577 273 12 23 500 34 599 1.96e-103 324
Msa0414930 AT2G47860.1 34.964 552 260 11 7 470 21 561 7.83e-101 317
Msa0414930 AT3G08570.1 34.215 567 289 12 19 508 30 589 1.10e-97 308
Msa0414930 AT1G30440.1 32.584 623 301 13 11 516 12 632 1.15e-97 310
Msa0414930 AT3G08660.1 35.688 538 289 15 19 506 30 560 1.38e-97 307
Msa0414930 AT2G47860.3 33.565 575 260 12 7 470 21 584 1.41e-95 304
Msa0414930 AT5G03250.1 34.661 502 236 10 9 424 10 505 8.97e-90 287
Msa0414930 AT3G08660.3 34.387 506 276 13 51 506 1 500 2.65e-89 284
Msa0414930 AT5G13600.1 33.210 539 273 12 18 472 20 555 1.35e-87 281
Msa0414930 AT3G49970.1 33.394 554 263 15 37 529 7 515 7.36e-85 272
Msa0414930 AT3G49970.2 33.394 554 263 15 37 529 7 515 7.36e-85 272
Msa0414930 AT5G66560.1 31.183 651 285 15 16 508 10 655 9.58e-79 260
Msa0414930 AT3G50840.1 33.650 526 270 11 10 471 1 511 8.84e-77 253
Msa0414930 AT2G47860.4 35.185 432 205 9 7 371 21 444 4.92e-76 247
Msa0414930 AT2G14820.2 31.857 474 249 7 22 426 25 493 5.55e-75 249
Msa0414930 AT2G14820.1 31.857 474 249 7 22 426 25 493 5.55e-75 249
Msa0414930 AT5G66560.3 32.734 556 255 12 67 508 76 626 6.17e-75 249
Msa0414930 AT5G66560.4 32.734 556 255 12 67 508 66 616 6.42e-75 249
Msa0414930 AT2G47860.6 33.407 455 205 10 7 371 21 467 1.05e-70 234
Msa0414930 AT3G08660.2 35.696 395 206 11 19 372 30 417 1.72e-68 227
Msa0414930 AT3G50840.2 33.469 490 248 10 45 471 1 475 2.49e-68 229
Msa0414930 AT3G50840.3 33.469 490 248 10 45 471 1 475 2.49e-68 229
Msa0414930 AT1G67900.5 31.400 500 249 5 21 430 23 518 3.21e-67 229
Msa0414930 AT1G67900.1 31.400 500 249 5 21 430 23 518 3.21e-67 229
Msa0414930 AT1G67900.3 31.400 500 249 5 21 430 23 518 3.21e-67 229
Msa0414930 AT1G67900.6 31.400 500 249 5 21 430 23 518 3.21e-67 229
Msa0414930 AT1G67900.2 31.400 500 249 5 21 430 23 518 3.21e-67 229
Msa0414930 AT1G67900.4 31.400 500 249 5 21 430 23 518 3.21e-67 229
Msa0414930 AT3G44820.1 28.315 558 295 11 18 471 17 573 4.92e-67 229
Msa0414930 AT4G31820.1 30.652 460 241 8 23 421 26 468 5.19e-67 227
Msa0414930 AT2G47860.5 32.816 451 205 10 110 470 1 443 7.16e-67 225
Msa0414930 AT2G47860.2 32.816 451 205 10 110 470 1 443 7.16e-67 225
Msa0414930 AT5G67440.3 32.328 464 240 9 21 421 24 476 2.03e-66 225
Msa0414930 AT5G67440.1 32.328 464 240 9 21 421 24 476 2.03e-66 225
Msa0414930 AT4G37590.1 30.480 479 246 9 21 436 24 478 3.51e-63 217
Msa0414930 AT2G23050.1 30.283 459 245 7 21 429 24 457 4.72e-63 214
Msa0414930 AT5G47800.3 28.632 475 277 8 19 437 21 489 1.59e-62 214
Msa0414930 AT5G47800.1 28.632 475 277 8 19 437 21 489 1.59e-62 214
Msa0414930 AT5G47800.4 28.632 475 277 8 19 437 21 489 1.59e-62 214
Msa0414930 AT5G47800.2 28.875 471 273 8 23 437 138 602 3.02e-61 213
Msa0414930 AT5G67440.2 31.390 446 232 9 39 421 5 439 3.08e-59 205
Msa0414930 AT5G03250.2 31.830 399 182 8 110 424 1 393 1.14e-58 202
Msa0414930 AT5G66560.2 31.723 476 200 11 16 371 10 480 5.18e-58 200
Msa0414930 AT4G31820.2 29.398 432 227 8 51 421 1 415 4.32e-57 199
Msa0414930 AT3G26490.1 29.339 484 256 8 21 419 23 505 1.37e-56 199
Msa0414930 AT3G26490.3 29.339 484 256 8 21 419 23 505 1.37e-56 199
Msa0414930 AT3G26490.4 29.339 484 256 8 21 419 23 505 1.37e-56 199
Msa0414930 AT1G52770.1 34.177 316 174 7 210 504 101 403 2.09e-43 160
Msa0414930 AT3G15570.1 40.553 217 112 2 210 422 106 309 3.27e-43 160
Msa0414930 AT5G48130.1 28.145 469 254 14 18 428 33 476 2.73e-42 160
Msa0414930 AT3G26490.2 28.571 448 232 9 21 381 23 469 5.21e-42 157
Msa0414930 AT3G19850.1 25.164 457 260 7 37 420 17 464 7.98e-41 155
Msa0414930 AT5G64330.1 28.693 352 203 3 211 514 373 724 8.05e-41 157
Msa0414930 AT5G64330.1 36.726 226 101 4 14 198 42 266 3.20e-39 152
Msa0414930 AT5G64330.3 35.470 234 129 1 211 422 314 547 6.44e-40 153
Msa0414930 AT5G64330.3 36.453 203 87 4 37 198 6 207 1.06e-30 126
Msa0414930 AT5G64330.2 35.470 234 129 1 211 422 373 606 7.46e-40 154
Msa0414930 AT5G64330.2 36.726 226 101 4 14 198 42 266 2.57e-39 152
Msa0414930 AT2G23050.2 27.596 366 194 6 110 429 1 341 1.46e-36 139
Msa0414930 AT1G50280.1 26.316 456 255 10 33 415 13 460 5.92e-36 140
Msa0414930 AT1G50280.2 27.033 418 228 9 67 415 18 427 7.87e-35 137
Msa0414930 AT5G10250.2 30.035 283 164 5 210 473 293 560 1.95e-33 134
Msa0414930 AT5G10250.2 35.676 185 114 2 18 198 44 227 1.23e-32 132
Msa0414930 AT5G10250.1 35.676 185 114 2 18 198 44 227 1.22e-32 132
Msa0414930 AT5G10250.1 31.502 273 158 6 210 473 293 545 2.61e-32 131
Msa0414930 AT3G03510.1 25.893 448 288 12 75 498 4 431 2.38e-31 126
Msa0414930 AT5G17580.2 25.167 449 274 11 26 423 22 459 2.96e-28 119
Msa0414930 AT5G17580.1 25.167 449 274 11 26 423 7 444 4.97e-28 118
Msa0414930 AT3G22104.1 25.747 435 249 15 26 406 6 420 2.36e-27 115
Msa0414930 AT3G22104.4 25.485 361 197 13 97 405 4 344 1.72e-18 88.6
Msa0414930 AT3G22104.2 25.485 361 197 13 97 405 4 344 1.72e-18 88.6
Msa0414930 AT3G22104.3 25.485 361 197 13 97 405 4 344 1.72e-18 88.6
Msa0414930 AT3G49900.2 32.099 162 98 5 9 164 49 204 4.62e-13 72.0
Msa0414930 AT3G49900.1 32.099 162 98 5 9 164 49 204 4.84e-13 72.0

Find 130 sgRNAs with CRISPR-Local

Find 193 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACAGGCCCATCTTCTAAA+TGG 0.198824 3_2:-60890803 None:intergenic
GTTAATATATAAGGACATTT+TGG 0.214594 3_2:-60888292 None:intergenic
TGAACTTCTATGGTTGGTTT+TGG 0.265183 3_2:-60888407 None:intergenic
ATTCGCCTCGCTGCAGGCCT+TGG 0.302123 3_2:-60889294 None:intergenic
GAACTCACCGACGTCGTTCC+AGG 0.323263 3_2:-60890702 None:intergenic
CACAATACTGATCAGTCATT+TGG 0.343048 3_2:-60889118 None:intergenic
CTACATCAGAAAACTAATAA+TGG 0.343477 3_2:+60888941 Msa0414930:CDS
CTTTCGATTTCATCTAGCTT+TGG 0.349959 3_2:-60890393 None:intergenic
CACAGCGTTCCACGATGTTT+AGG 0.358430 3_2:-60889256 None:intergenic
GATTGATAATTGATTCTAGA+AGG 0.367450 3_2:-60889814 None:intergenic
TTAGCCGCCATGAACTTCTA+TGG 0.375043 3_2:-60888417 None:intergenic
ATGGCAAGAGAGAGTCTATT+AGG 0.377719 3_2:-60888441 None:intergenic
AGAGAAAGTATGCAGTATAA+TGG 0.385082 3_2:+60890416 Msa0414930:CDS
GGTGGGTGGGTTAATATATA+AGG 0.390757 3_2:-60888301 None:intergenic
TATGTCAGAGAGATCTATTC+TGG 0.403839 3_2:-60888988 None:intergenic
TGGATTGAACTTTGTGTTTG+TGG 0.405406 3_2:-60888217 None:intergenic
GCCGCTCACCCGCGAATTGG+TGG 0.411115 3_2:+60889324 Msa0414930:CDS
ATCGTAAAACTGCGACATTA+TGG 0.413061 3_2:-60889079 None:intergenic
CTAGCCGCTCACCCGCGAAT+TGG 0.415900 3_2:+60889321 Msa0414930:CDS
AAAGCAGCTAAATTCTGTTA+TGG 0.427243 3_2:+60889035 Msa0414930:CDS
TGAGATTCGTTTCTCGAGTT+CGG 0.432245 3_2:-60889930 None:intergenic
CTCAGCATCTCAAAATTCAA+TGG 0.447229 3_2:+60890187 Msa0414930:CDS
TCTGACATACCAGGAGGTCC+TGG 0.459917 3_2:+60889002 Msa0414930:CDS
AATTCGCGGGTGAGCGGCTA+GGG 0.462163 3_2:-60889319 None:intergenic
AGGGAAATTCGCCTCGCTGC+AGG 0.464006 3_2:-60889300 None:intergenic
CACAGGCCCATCTTCTAAAT+GGG 0.466417 3_2:-60890802 None:intergenic
TCAAAGATTCCAGGACCTCC+TGG 0.474694 3_2:-60889011 None:intergenic
CCGCCATGAACTTCTATGGT+TGG 0.474905 3_2:-60888413 None:intergenic
ACTGATGTTATAGTTGAAGT+TGG 0.477365 3_2:+60888647 Msa0414930:CDS
GATGTTTAGGTCATCGGCAT+AGG 0.480481 3_2:-60889243 None:intergenic
AATAGAGAACCTTCTTCTCC+TGG 0.481171 3_2:-60890838 None:intergenic
GACAATGAATTGCATGGTGG+TGG 0.482861 3_2:-60888319 None:intergenic
CATCGACGGTTACGTGTTCA+AGG 0.483329 3_2:-60889958 None:intergenic
TATATTGCAGTTCATGTTGG+TGG 0.483877 3_2:+60888908 Msa0414930:intron
CTGGGCTTTGTCAAATCCAC+AGG 0.488999 3_2:-60890819 None:intergenic
GTCACAGAATAAACGGTTAC+CGG 0.491294 3_2:+60890476 Msa0414930:CDS
TGACAAAGCCCAGGAGAAGA+AGG 0.492154 3_2:+60890829 Msa0414930:CDS
AATGATTCTTTGAGTTCTCC+CGG 0.492260 3_2:-60890094 None:intergenic
CATCTCAGGATTCGTTGAAA+AGG 0.493684 3_2:+60890048 Msa0414930:CDS
AGACGGTGGAGGCGCGGAGG+TGG 0.493981 3_2:-60889901 None:intergenic
AAACCAACCATAGAAGTTCA+TGG 0.495006 3_2:+60888410 Msa0414930:exon
TCTCTTGCCATGGAGAGAAC+TGG 0.495880 3_2:+60888453 Msa0414930:CDS
TGCATGCGTCACAGAATAAA+CGG 0.496682 3_2:+60890469 Msa0414930:CDS
GATACGGCCCATTTAGAAGA+TGG 0.496730 3_2:+60890795 Msa0414930:CDS
TAGAGAGAAATTCATCGGTC+CGG 0.497651 3_2:-60889157 None:intergenic
GAAGATGAAGATGTACATTA+CGG 0.501299 3_2:+60890653 Msa0414930:CDS
ATCAAGAACAGCTAGTTCTT+CGG 0.501513 3_2:-60889348 None:intergenic
CGCAACGGAGGAGGCAGCAG+AGG 0.501740 3_2:-60889874 None:intergenic
CTCGCTGAAATCGCCGCGTA+CGG 0.501994 3_2:+60890160 Msa0414930:CDS
TTCTTCGGTCCACCAATTCG+CGG 0.505119 3_2:-60889333 None:intergenic
TGTTGAAGCTGCAAGCGCCA+AGG 0.505313 3_2:+60889277 Msa0414930:CDS
GGAAAAGCTGCTTTCTCCGA+TGG 0.507789 3_2:-60889842 None:intergenic
GGTGGATTGCGCAACGGAGG+AGG 0.517135 3_2:-60889883 None:intergenic
CAATTCGCGGGTGAGCGGCT+AGG 0.520783 3_2:-60889320 None:intergenic
AAATTTATGACTGAGTTAGC+TGG 0.521430 3_2:-60888341 None:intergenic
ACTTCAACTATAACATCAGT+TGG 0.529282 3_2:-60888644 None:intergenic
TCTTCGGTCCACCAATTCGC+GGG 0.531063 3_2:-60889332 None:intergenic
ATGATATGATTTAATCTGCA+TGG 0.533954 3_2:-60888237 None:intergenic
GGTCATCGGCATAGGGAAGA+AGG 0.536469 3_2:-60889235 None:intergenic
TCCACCAATTCGCGGGTGAG+CGG 0.536505 3_2:-60889325 None:intergenic
TTCCACGATGTTTAGGTCAT+CGG 0.543178 3_2:-60889249 None:intergenic
GACGGATGTGTCGTTGGTGA+GGG 0.544324 3_2:+60890602 Msa0414930:CDS
AGAATGCGACGGAGCTTCGA+CGG 0.544942 3_2:+60890563 Msa0414930:CDS
CAGCAGAAGAACGTTACGCC+TGG 0.545309 3_2:+60890684 Msa0414930:CDS
CGACGGATGTGTCGTTGGTG+AGG 0.545411 3_2:+60890601 Msa0414930:CDS
TTTAGCGACGGATGTGTCGT+TGG 0.546279 3_2:+60890596 Msa0414930:CDS
CGCCACACGCAGCATAGCGA+CGG 0.549727 3_2:-60890119 None:intergenic
AGCGTTCGCAGAGTCATCTC+AGG 0.551426 3_2:+60890034 Msa0414930:CDS
TAATATATTGCAGTTCATGT+TGG 0.553388 3_2:+60888905 Msa0414930:intron
GGAGCCGGTGAGAGTGAAGA+AGG 0.553408 3_2:-60889186 None:intergenic
CGCATGCACTCGCGCCTCGT+AGG 0.555314 3_2:-60890454 None:intergenic
GTCGCCTTCTTCACTCTCAC+CGG 0.555603 3_2:+60889182 Msa0414930:CDS
ATGAATTGCATGGTGGTGGG+TGG 0.555992 3_2:-60888315 None:intergenic
ATAGAGAACCTTCTTCTCCT+GGG 0.555992 3_2:-60890837 None:intergenic
GAAGAGTTTCTCGCCGTCGT+AGG 0.556907 3_2:-60890002 None:intergenic
ATGTTTAGGTCATCGGCATA+GGG 0.559679 3_2:-60889242 None:intergenic
GTGACAATAACCTCGCTGGC+CGG 0.561136 3_2:+60889138 Msa0414930:CDS
CTTGAGGACTGTAACGGAGC+CGG 0.565412 3_2:-60889201 None:intergenic
CGCCGTTGATATCTATCTCA+AGG 0.566265 3_2:+60890264 Msa0414930:CDS
TAATAGACTCTCTCTTGCCA+TGG 0.568176 3_2:+60888443 Msa0414930:CDS
AGGCAGCAGAGGAAGTTGAT+CGG 0.571060 3_2:-60889863 None:intergenic
ATACGGCCCATTTAGAAGAT+GGG 0.571365 3_2:+60890796 Msa0414930:CDS
ATAGATCTCTCTGACATACC+AGG 0.571727 3_2:+60888993 Msa0414930:CDS
GACTTTAGAGAGAAATTCAT+CGG 0.574545 3_2:-60889162 None:intergenic
GAAAAGCTGCTTTCTCCGAT+GGG 0.576808 3_2:-60889841 None:intergenic
CGCGGAGGTGGATTGCGCAA+CGG 0.577702 3_2:-60889889 None:intergenic
CCATTGGCCAGTTCTCTCCA+TGG 0.580279 3_2:-60888460 None:intergenic
GCCTCGTAGGAAAGCTTCAA+CGG 0.586218 3_2:-60890441 None:intergenic
GAAGGTGGTGGCAAGACTTG+AGG 0.587288 3_2:-60889217 None:intergenic
CGGCATAGGGAAGAAGGTGG+TGG 0.587751 3_2:-60889229 None:intergenic
CTGTGGATTTGACAAAGCCC+AGG 0.588085 3_2:+60890820 Msa0414930:CDS
GTCGTTGGTGAGGGAGAATG+AGG 0.593999 3_2:+60890611 Msa0414930:CDS
TATTGTGACAATAACCTCGC+TGG 0.595754 3_2:+60889134 Msa0414930:CDS
CTCCGTCGCTATGCTGCGTG+TGG 0.597224 3_2:+60890117 Msa0414930:CDS
TGAATTGCATGGTGGTGGGT+GGG 0.603256 3_2:-60888314 None:intergenic
TGCAGACGGTGGAGGCGCGG+AGG 0.606407 3_2:-60889904 None:intergenic
ACTACGATCAGTTGAAGTTG+AGG 0.608135 3_2:+60890523 Msa0414930:CDS
TACCTTGAGATAGATATCAA+CGG 0.618572 3_2:-60890266 None:intergenic
GGAGAATGAGGAGTTACGAT+CGG 0.618799 3_2:+60890623 Msa0414930:CDS
TTCAGCGAGGTACATGTCGA+CGG 0.620480 3_2:-60890146 None:intergenic
AGCTCGTTTCTGCCTCCACA+AGG 0.622318 3_2:+60888673 Msa0414930:CDS
AATTATCAATCTCTTCCCAT+CGG 0.625194 3_2:+60889826 Msa0414930:CDS
TCCGTTGAAGCTTTCCTACG+AGG 0.627491 3_2:+60890440 Msa0414930:CDS
GCGTGTAAAACTATCTGCAC+CGG 0.627565 3_2:-60890495 None:intergenic
GCGACGGAGCTTCGACGGAG+AGG 0.630390 3_2:+60890568 Msa0414930:CDS
CCATGGAGAGAACTGGCCAA+TGG 0.634800 3_2:+60888460 Msa0414930:CDS
ACAATGAATTGCATGGTGGT+GGG 0.636959 3_2:-60888318 None:intergenic
CATCACGAGGAGGTCATCGA+CGG 0.639716 3_2:-60889972 None:intergenic
GCAAGACTTGAGGACTGTAA+CGG 0.643560 3_2:-60889207 None:intergenic
GGAGGTGGATTGCGCAACGG+AGG 0.652208 3_2:-60889886 None:intergenic
GGAGAGGAATCGTTTAGCGA+CGG 0.657325 3_2:+60890584 Msa0414930:CDS
ATTCATCGGTCCGGCCAGCG+AGG 0.661189 3_2:-60889148 None:intergenic
GATCAGTTGAAGTTGAGGAG+TGG 0.665109 3_2:+60890528 Msa0414930:CDS
CGTAGGAGAATGACATCACG+AGG 0.666273 3_2:-60889985 None:intergenic
GATGCTGAGTTCACCGTACG+CGG 0.666328 3_2:-60890173 None:intergenic
TCAGACGACGGAGAATGCGA+CGG 0.675092 3_2:+60890552 Msa0414930:CDS
CCATTTAGAAGATGGGCCTG+TGG 0.683204 3_2:+60890803 Msa0414930:CDS
TTGAGGAGTGGATCAGACGA+CGG 0.684167 3_2:+60890540 Msa0414930:CDS
GTGATGTCATTCTCCTACGA+CGG 0.684941 3_2:+60889989 Msa0414930:CDS
TGCCGATGACCTAAACATCG+TGG 0.692060 3_2:+60889247 Msa0414930:CDS
AAGCGCCAAGGCCTGCAGCG+AGG 0.703083 3_2:+60889289 Msa0414930:CDS
CATCGGCATAGGGAAGAAGG+TGG 0.713733 3_2:-60889232 None:intergenic
TAGCTGGACAATGAATTGCA+TGG 0.734784 3_2:-60888325 None:intergenic
CGTTACGCCTGGAACGACGT+CGG 0.742115 3_2:+60890695 Msa0414930:CDS
AGGAGAATGACATCACGAGG+AGG 0.751905 3_2:-60889982 None:intergenic
GATCTCTCTGACATACCAGG+AGG 0.759330 3_2:+60888996 Msa0414930:CDS
TGAGATAGATATCAACGGCG+CGG 0.763641 3_2:-60890261 None:intergenic
CGTACGCGGCGATTTCAGCG+AGG 0.778421 3_2:-60890159 None:intergenic
CTGGACAATGAATTGCATGG+TGG 0.791704 3_2:-60888322 None:intergenic
CCAACCATAGAAGTTCATGG+CGG 0.819770 3_2:+60888413 Msa0414930:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGAAAATGGTTATTATATA+TGG - chr3_2:60888580-60888599 None:intergenic 15.0%
!! ATAGTACAAATATTCTAAAT+AGG - chr3_2:60889506-60889525 None:intergenic 15.0%
!!! GTTAATATATAAGGACATTT+TGG - chr3_2:60888295-60888314 None:intergenic 20.0%
!! TCAAAGTACAAAATAGAAAA+TGG - chr3_2:60888593-60888612 None:intergenic 20.0%
!! AAAGAATACCTTAACAAATT+TGG + chr3_2:60890294-60890313 Msa0414930:intron 20.0%
!!! ATTCAAATCCAAATTTGTTA+AGG - chr3_2:60890305-60890324 None:intergenic 20.0%
!! AAAATACAAACTCGTTTAAA+CGG - chr3_2:60890359-60890378 None:intergenic 20.0%
! ATGATATGATTTAATCTGCA+TGG - chr3_2:60888240-60888259 None:intergenic 25.0%
! TGTACTTTGATTATTATTGC+AGG + chr3_2:60888603-60888622 Msa0414930:intron 25.0%
! GTACTTTGATTATTATTGCA+GGG + chr3_2:60888604-60888623 Msa0414930:intron 25.0%
! ATGAACAACATAATTCACAT+GGG - chr3_2:60888713-60888732 None:intergenic 25.0%
! TAATATATTGCAGTTCATGT+TGG + chr3_2:60888905-60888924 Msa0414930:intron 25.0%
! CTACATCAGAAAACTAATAA+TGG + chr3_2:60888941-60888960 Msa0414930:CDS 25.0%
! CTAAATAGGTCAAGTAATAT+GGG - chr3_2:60889492-60889511 None:intergenic 25.0%
! TCTAAATAGGTCAAGTAATA+TGG - chr3_2:60889493-60889512 None:intergenic 25.0%
!! TTCAGTTTAAAATTGTGCAT+TGG + chr3_2:60889668-60889687 Msa0414930:intron 25.0%
!! GATTGATAATTGATTCTAGA+AGG - chr3_2:60889817-60889836 None:intergenic 25.0%
!!! CGAGTTTGTATTTTTTTTTC+AGG + chr3_2:60890365-60890384 Msa0414930:intron 25.0%
AAATTTATGACTGAGTTAGC+TGG - chr3_2:60888344-60888363 None:intergenic 30.0%
TGCATGCATGGATTTAAAAA+TGG - chr3_2:60888514-60888533 None:intergenic 30.0%
ACTTCAACTATAACATCAGT+TGG - chr3_2:60888647-60888666 None:intergenic 30.0%
ACTGATGTTATAGTTGAAGT+TGG + chr3_2:60888647-60888666 Msa0414930:CDS 30.0%
!!! AATTCACATGGGTCATTTTT+TGG - chr3_2:60888702-60888721 None:intergenic 30.0%
CATGAACAACATAATTCACA+TGG - chr3_2:60888714-60888733 None:intergenic 30.0%
CATGTGAATTATGTTGTTCA+TGG + chr3_2:60888712-60888731 Msa0414930:intron 30.0%
CTAATCACACTTATTGATGT+TGG - chr3_2:60888803-60888822 None:intergenic 30.0%
CATATACACGATTCTAATAC+TGG - chr3_2:60888831-60888850 None:intergenic 30.0%
AAAGCAGCTAAATTCTGTTA+TGG + chr3_2:60889035-60889054 Msa0414930:CDS 30.0%
! GACTTTAGAGAGAAATTCAT+CGG - chr3_2:60889165-60889184 None:intergenic 30.0%
TCAACTAGGTCAAGTAATAT+GGG + chr3_2:60889705-60889724 Msa0414930:intron 30.0%
AATTATCAATCTCTTCCCAT+CGG + chr3_2:60889826-60889845 Msa0414930:CDS 30.0%
TACCTTGAGATAGATATCAA+CGG - chr3_2:60890269-60890288 None:intergenic 30.0%
! AGAGAAAGTATGCAGTATAA+TGG + chr3_2:60890416-60890435 Msa0414930:CDS 30.0%
GAAGATGAAGATGTACATTA+CGG + chr3_2:60890653-60890672 Msa0414930:CDS 30.0%
TGGATTGAACTTTGTGTTTG+TGG - chr3_2:60888220-60888239 None:intergenic 35.0%
!!! TGAACTTCTATGGTTGGTTT+TGG - chr3_2:60888410-60888429 None:intergenic 35.0%
AAACCAACCATAGAAGTTCA+TGG + chr3_2:60888410-60888429 Msa0414930:exon 35.0%
TTTAGTGTGTTGTGTACCAT+TGG - chr3_2:60888479-60888498 None:intergenic 35.0%
!!! ATTTTTTGGATACCTTGTGG+AGG - chr3_2:60888688-60888707 None:intergenic 35.0%
!!! GTCATTTTTTGGATACCTTG+TGG - chr3_2:60888691-60888710 None:intergenic 35.0%
TATATTGCAGTTCATGTTGG+TGG + chr3_2:60888908-60888927 Msa0414930:intron 35.0%
TATGTCAGAGAGATCTATTC+TGG - chr3_2:60888991-60889010 None:intergenic 35.0%
ATCGTAAAACTGCGACATTA+TGG - chr3_2:60889082-60889101 None:intergenic 35.0%
CACAATACTGATCAGTCATT+TGG - chr3_2:60889121-60889140 None:intergenic 35.0%
! ATCAAGAACAGCTAGTTCTT+CGG - chr3_2:60889351-60889370 None:intergenic 35.0%
ATAGGTCAAGTAATATGGGA+CGG - chr3_2:60889488-60889507 None:intergenic 35.0%
GTCAACTAGGTCAAGTAATA+TGG + chr3_2:60889704-60889723 Msa0414930:intron 35.0%
ATTCACTGTAATCTGATGAC+TGG - chr3_2:60889769-60889788 None:intergenic 35.0%
! AATGATTCTTTGAGTTCTCC+CGG - chr3_2:60890097-60890116 None:intergenic 35.0%
CTCAGCATCTCAAAATTCAA+TGG + chr3_2:60890187-60890206 Msa0414930:CDS 35.0%
! CTTTCGATTTCATCTAGCTT+TGG - chr3_2:60890396-60890415 None:intergenic 35.0%
TTCTTCTGTGTCGAAAAAAC+TGG + chr3_2:60890746-60890765 Msa0414930:CDS 35.0%
TCTTCTGTGTCGAAAAAACT+GGG + chr3_2:60890747-60890766 Msa0414930:CDS 35.0%
CTGGGAAAGTTGTTCAAAAA+TGG + chr3_2:60890765-60890784 Msa0414930:CDS 35.0%
!! GGTGGGTGGGTTAATATATA+AGG - chr3_2:60888304-60888323 None:intergenic 40.0%
ACAATGAATTGCATGGTGGT+GGG - chr3_2:60888321-60888340 None:intergenic 40.0%
TAGCTGGACAATGAATTGCA+TGG - chr3_2:60888328-60888347 None:intergenic 40.0%
!!! CTATGGTTGGTTTTGGTATG+TGG - chr3_2:60888403-60888422 None:intergenic 40.0%
ATGGCAAGAGAGAGTCTATT+AGG - chr3_2:60888444-60888463 None:intergenic 40.0%
TAATAGACTCTCTCTTGCCA+TGG + chr3_2:60888443-60888462 Msa0414930:CDS 40.0%
GACAAATCTTCGATCAGAAG+CGG - chr3_2:60888757-60888776 None:intergenic 40.0%
CTTCTGATCGAAGATTTGTC+TGG + chr3_2:60888757-60888776 Msa0414930:intron 40.0%
ATAGATCTCTCTGACATACC+AGG + chr3_2:60888993-60889012 Msa0414930:CDS 40.0%
!!! GCTGCTTTTTCAAAGATTCC+AGG - chr3_2:60889023-60889042 None:intergenic 40.0%
TATTGTGACAATAACCTCGC+TGG + chr3_2:60889134-60889153 Msa0414930:CDS 40.0%
TAGAGAGAAATTCATCGGTC+CGG - chr3_2:60889160-60889179 None:intergenic 40.0%
ATGTTTAGGTCATCGGCATA+GGG - chr3_2:60889245-60889264 None:intergenic 40.0%
TTCCACGATGTTTAGGTCAT+CGG - chr3_2:60889252-60889271 None:intergenic 40.0%
ATCACATGTATGAAACAGCG+CGG + chr3_2:60889392-60889411 Msa0414930:intron 40.0%
CTAGGTCAAGTAATATGGGA+CGG + chr3_2:60889709-60889728 Msa0414930:intron 40.0%
TGAGATTCGTTTCTCGAGTT+CGG - chr3_2:60889933-60889952 None:intergenic 40.0%
CATCTCAGGATTCGTTGAAA+AGG + chr3_2:60890048-60890067 Msa0414930:CDS 40.0%
TGAAAAGGAGAAAAACGCAG+CGG + chr3_2:60890063-60890082 Msa0414930:CDS 40.0%
TGCATGCGTCACAGAATAAA+CGG + chr3_2:60890469-60890488 Msa0414930:CDS 40.0%
GTCACAGAATAAACGGTTAC+CGG + chr3_2:60890476-60890495 Msa0414930:CDS 40.0%
ACTACGATCAGTTGAAGTTG+AGG + chr3_2:60890523-60890542 Msa0414930:CDS 40.0%
GTTGTTCAAAAATGGCGCTA+AGG + chr3_2:60890773-60890792 Msa0414930:CDS 40.0%
CAAAAATGGCGCTAAGGATA+CGG + chr3_2:60890779-60890798 Msa0414930:CDS 40.0%
ATACGGCCCATTTAGAAGAT+GGG + chr3_2:60890796-60890815 Msa0414930:CDS 40.0%
ATAGAGAACCTTCTTCTCCT+GGG - chr3_2:60890840-60890859 None:intergenic 40.0%
AATAGAGAACCTTCTTCTCC+TGG - chr3_2:60890841-60890860 None:intergenic 40.0%
GACAATGAATTGCATGGTGG+TGG - chr3_2:60888322-60888341 None:intergenic 45.0%
CTGGACAATGAATTGCATGG+TGG - chr3_2:60888325-60888344 None:intergenic 45.0%
CCAACCATAGAAGTTCATGG+CGG + chr3_2:60888413-60888432 Msa0414930:exon 45.0%
TTAGCCGCCATGAACTTCTA+TGG - chr3_2:60888420-60888439 None:intergenic 45.0%
GCATGTGTATGATGCATGCA+TGG - chr3_2:60888526-60888545 None:intergenic 45.0%
GCAAGACTTGAGGACTGTAA+CGG - chr3_2:60889210-60889229 None:intergenic 45.0%
GATGTTTAGGTCATCGGCAT+AGG - chr3_2:60889246-60889265 None:intergenic 45.0%
TCACATGTATGAAACAGCGC+GGG + chr3_2:60889393-60889412 Msa0414930:intron 45.0%
CTCTGAGTATGTAATCAGCG+CGG - chr3_2:60889441-60889460 None:intergenic 45.0%
GTCAAGTAATATGGGACGGA+GGG - chr3_2:60889713-60889732 None:intergenic 45.0%
CATACGTGACAGAGTCAACT+AGG + chr3_2:60889691-60889710 Msa0414930:intron 45.0%
GTCAAGTAATATGGGACGGA+GGG + chr3_2:60889713-60889732 Msa0414930:intron 45.0%
TGATGACTGGATTCCGTTAC+CGG - chr3_2:60889756-60889775 None:intergenic 45.0%
! GAAAAGCTGCTTTCTCCGAT+GGG - chr3_2:60889844-60889863 None:intergenic 45.0%
GTGATGTCATTCTCCTACGA+CGG + chr3_2:60889989-60890008 Msa0414930:CDS 45.0%
! TCGATTTTACGCGCGTGTTT+AGG - chr3_2:60890229-60890248 None:intergenic 45.0%
TGAGATAGATATCAACGGCG+CGG - chr3_2:60890264-60890283 None:intergenic 45.0%
CGCCGTTGATATCTATCTCA+AGG + chr3_2:60890264-60890283 Msa0414930:CDS 45.0%
GCGTGTAAAACTATCTGCAC+CGG - chr3_2:60890498-60890517 None:intergenic 45.0%
GATCAGTTGAAGTTGAGGAG+TGG + chr3_2:60890528-60890547 Msa0414930:CDS 45.0%
GGAGAATGAGGAGTTACGAT+CGG + chr3_2:60890623-60890642 Msa0414930:CDS 45.0%
GATACGGCCCATTTAGAAGA+TGG + chr3_2:60890795-60890814 Msa0414930:CDS 45.0%
CACAGGCCCATCTTCTAAAT+GGG - chr3_2:60890805-60890824 None:intergenic 45.0%
!! TGAATTGCATGGTGGTGGGT+GGG - chr3_2:60888317-60888336 None:intergenic 50.0%
!! ATGAATTGCATGGTGGTGGG+TGG - chr3_2:60888318-60888337 None:intergenic 50.0%
CCGCCATGAACTTCTATGGT+TGG - chr3_2:60888416-60888435 None:intergenic 50.0%
TCTCTTGCCATGGAGAGAAC+TGG + chr3_2:60888453-60888472 Msa0414930:CDS 50.0%
GATCTCTCTGACATACCAGG+AGG + chr3_2:60888996-60889015 Msa0414930:CDS 50.0%
TCAAAGATTCCAGGACCTCC+TGG - chr3_2:60889014-60889033 None:intergenic 50.0%
TGCCGATGACCTAAACATCG+TGG + chr3_2:60889247-60889266 Msa0414930:CDS 50.0%
CACAGCGTTCCACGATGTTT+AGG - chr3_2:60889259-60889278 None:intergenic 50.0%
TTCTTCGGTCCACCAATTCG+CGG - chr3_2:60889336-60889355 None:intergenic 50.0%
CACATGTATGAAACAGCGCG+GGG + chr3_2:60889394-60889413 Msa0414930:intron 50.0%
ATACTCAGAGCGATCACTCC+AGG + chr3_2:60889451-60889470 Msa0414930:intron 50.0%
GGTCAAGTAATATGGGACGG+AGG - chr3_2:60889712-60889731 None:intergenic 50.0%
GGTCAAGTAATATGGGACGG+AGG + chr3_2:60889712-60889731 Msa0414930:intron 50.0%
GGAGTAGTTCGAAACCACTC+CGG + chr3_2:60889734-60889753 Msa0414930:intron 50.0%
GTTCGAAACCACTCCGGTAA+CGG + chr3_2:60889740-60889759 Msa0414930:intron 50.0%
! GGAAAAGCTGCTTTCTCCGA+TGG - chr3_2:60889845-60889864 None:intergenic 50.0%
! AGGCAGCAGAGGAAGTTGAT+CGG - chr3_2:60889866-60889885 None:intergenic 50.0%
! CTCGAGTTCGGTTTTGCAGA+CGG - chr3_2:60889921-60889940 None:intergenic 50.0%
CATCGACGGTTACGTGTTCA+AGG - chr3_2:60889961-60889980 None:intergenic 50.0%
AGGAGAATGACATCACGAGG+AGG - chr3_2:60889985-60890004 None:intergenic 50.0%
CGTAGGAGAATGACATCACG+AGG - chr3_2:60889988-60890007 None:intergenic 50.0%
! AAACGCAGCGGTTTTCACTC+CGG + chr3_2:60890075-60890094 Msa0414930:CDS 50.0%
TTCAGCGAGGTACATGTCGA+CGG - chr3_2:60890149-60890168 None:intergenic 50.0%
TCCGTTGAAGCTTTCCTACG+AGG + chr3_2:60890440-60890459 Msa0414930:CDS 50.0%
GCCTCGTAGGAAAGCTTCAA+CGG - chr3_2:60890444-60890463 None:intergenic 50.0%
TTGAGGAGTGGATCAGACGA+CGG + chr3_2:60890540-60890559 Msa0414930:CDS 50.0%
GGAGAGGAATCGTTTAGCGA+CGG + chr3_2:60890584-60890603 Msa0414930:CDS 50.0%
TTTAGCGACGGATGTGTCGT+TGG + chr3_2:60890596-60890615 Msa0414930:CDS 50.0%
CCACAGGCCCATCTTCTAAA+TGG - chr3_2:60890806-60890825 None:intergenic 50.0%
CCATTTAGAAGATGGGCCTG+TGG + chr3_2:60890803-60890822 Msa0414930:CDS 50.0%
! CTGGGCTTTGTCAAATCCAC+AGG - chr3_2:60890822-60890841 None:intergenic 50.0%
CTGTGGATTTGACAAAGCCC+AGG + chr3_2:60890820-60890839 Msa0414930:CDS 50.0%
TGACAAAGCCCAGGAGAAGA+AGG + chr3_2:60890829-60890848 Msa0414930:CDS 50.0%
CCATTGGCCAGTTCTCTCCA+TGG - chr3_2:60888463-60888482 None:intergenic 55.0%
CCATGGAGAGAACTGGCCAA+TGG + chr3_2:60888460-60888479 Msa0414930:CDS 55.0%
AGCTCGTTTCTGCCTCCACA+AGG + chr3_2:60888673-60888692 Msa0414930:CDS 55.0%
TCTGACATACCAGGAGGTCC+TGG + chr3_2:60889002-60889021 Msa0414930:CDS 55.0%
GTGACAATAACCTCGCTGGC+CGG + chr3_2:60889138-60889157 Msa0414930:CDS 55.0%
GTCGCCTTCTTCACTCTCAC+CGG + chr3_2:60889182-60889201 Msa0414930:CDS 55.0%
! CTTGAGGACTGTAACGGAGC+CGG - chr3_2:60889204-60889223 None:intergenic 55.0%
! GAAGGTGGTGGCAAGACTTG+AGG - chr3_2:60889220-60889239 None:intergenic 55.0%
CATCGGCATAGGGAAGAAGG+TGG - chr3_2:60889235-60889254 None:intergenic 55.0%
GGTCATCGGCATAGGGAAGA+AGG - chr3_2:60889238-60889257 None:intergenic 55.0%
TGTTGAAGCTGCAAGCGCCA+AGG + chr3_2:60889277-60889296 Msa0414930:CDS 55.0%
TCTTCGGTCCACCAATTCGC+GGG - chr3_2:60889335-60889354 None:intergenic 55.0%
TGTAATCAGCGCGGCTGCAA+TGG - chr3_2:60889432-60889451 None:intergenic 55.0%
ACTGGATTCCGTTACCGGAG+TGG - chr3_2:60889751-60889770 None:intergenic 55.0%
! TTCGGTTTTGCAGACGGTGG+AGG - chr3_2:60889915-60889934 None:intergenic 55.0%
! GAGTTCGGTTTTGCAGACGG+TGG - chr3_2:60889918-60889937 None:intergenic 55.0%
CATCACGAGGAGGTCATCGA+CGG - chr3_2:60889975-60889994 None:intergenic 55.0%
GAAGAGTTTCTCGCCGTCGT+AGG - chr3_2:60890005-60890024 None:intergenic 55.0%
AGCGTTCGCAGAGTCATCTC+AGG + chr3_2:60890034-60890053 Msa0414930:CDS 55.0%
! AACGCAGCGGTTTTCACTCC+GGG + chr3_2:60890076-60890095 Msa0414930:CDS 55.0%
GATGCTGAGTTCACCGTACG+CGG - chr3_2:60890176-60890195 None:intergenic 55.0%
TCAGACGACGGAGAATGCGA+CGG + chr3_2:60890552-60890571 Msa0414930:CDS 55.0%
AGAATGCGACGGAGCTTCGA+CGG + chr3_2:60890563-60890582 Msa0414930:CDS 55.0%
! GACGGATGTGTCGTTGGTGA+GGG + chr3_2:60890602-60890621 Msa0414930:CDS 55.0%
! GTCGTTGGTGAGGGAGAATG+AGG + chr3_2:60890611-60890630 Msa0414930:CDS 55.0%
CAGCAGAAGAACGTTACGCC+TGG + chr3_2:60890684-60890703 Msa0414930:CDS 55.0%
GGAGCCGGTGAGAGTGAAGA+AGG - chr3_2:60889189-60889208 None:intergenic 60.0%
CGGCATAGGGAAGAAGGTGG+TGG - chr3_2:60889232-60889251 None:intergenic 60.0%
AGGGAAATTCGCCTCGCTGC+AGG - chr3_2:60889303-60889322 None:intergenic 60.0%
AATTCGCGGGTGAGCGGCTA+GGG - chr3_2:60889322-60889341 None:intergenic 60.0%
TCCACCAATTCGCGGGTGAG+CGG - chr3_2:60889328-60889347 None:intergenic 60.0%
ATCAGCGCGGCTGCAATGGT+TGG - chr3_2:60889428-60889447 None:intergenic 60.0%
! TTTTGCAGACGGTGGAGGCG+CGG - chr3_2:60889910-60889929 None:intergenic 60.0%
CTCGCTGAAATCGCCGCGTA+CGG + chr3_2:60890160-60890179 Msa0414930:CDS 60.0%
! CGACGGATGTGTCGTTGGTG+AGG + chr3_2:60890601-60890620 Msa0414930:CDS 60.0%
CGTTACGCCTGGAACGACGT+CGG + chr3_2:60890695-60890714 Msa0414930:CDS 60.0%
GAACTCACCGACGTCGTTCC+AGG - chr3_2:60890705-60890724 None:intergenic 60.0%
ATTCATCGGTCCGGCCAGCG+AGG - chr3_2:60889151-60889170 None:intergenic 65.0%
ATTCGCCTCGCTGCAGGCCT+TGG - chr3_2:60889297-60889316 None:intergenic 65.0%
CAATTCGCGGGTGAGCGGCT+AGG - chr3_2:60889323-60889342 None:intergenic 65.0%
CTAGCCGCTCACCCGCGAAT+TGG + chr3_2:60889321-60889340 Msa0414930:CDS 65.0%
AGCGCGGCTGCAATGGTTGG+AGG - chr3_2:60889425-60889444 None:intergenic 65.0%
!! GGTGGATTGCGCAACGGAGG+AGG - chr3_2:60889886-60889905 None:intergenic 65.0%
!! GGAGGTGGATTGCGCAACGG+AGG - chr3_2:60889889-60889908 None:intergenic 65.0%
!! CGCGGAGGTGGATTGCGCAA+CGG - chr3_2:60889892-60889911 None:intergenic 65.0%
CTCCGTCGCTATGCTGCGTG+TGG + chr3_2:60890117-60890136 Msa0414930:CDS 65.0%
CGCCACACGCAGCATAGCGA+CGG - chr3_2:60890122-60890141 None:intergenic 65.0%
CGTACGCGGCGATTTCAGCG+AGG - chr3_2:60890162-60890181 None:intergenic 65.0%
AAGCGCCAAGGCCTGCAGCG+AGG + chr3_2:60889289-60889308 Msa0414930:CDS 70.0%
GCCGCTCACCCGCGAATTGG+TGG + chr3_2:60889324-60889343 Msa0414930:CDS 70.0%
GGGACGGAGGGAGTAGCTCC+TGG - chr3_2:60889472-60889491 None:intergenic 70.0%
CGCAACGGAGGAGGCAGCAG+AGG - chr3_2:60889877-60889896 None:intergenic 70.0%
CGCATGCACTCGCGCCTCGT+AGG - chr3_2:60890457-60890476 None:intergenic 70.0%
GCGACGGAGCTTCGACGGAG+AGG + chr3_2:60890568-60890587 Msa0414930:CDS 70.0%
! AGACGGTGGAGGCGCGGAGG+TGG - chr3_2:60889904-60889923 None:intergenic 75.0%
! TGCAGACGGTGGAGGCGCGG+AGG - chr3_2:60889907-60889926 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 60888204 60890866 60888204 ID=Msa0414930;Name=Msa0414930
chr3_2 mRNA 60888204 60890866 60888204 ID=Msa0414930-mRNA-1;Parent=Msa0414930;Name=Msa0414930-mRNA-1;_AED=0.28;_eAED=0.28;_QI=225|0.5|0.4|1|1|1|5|0|529
chr3_2 exon 60888204 60888481 60888204 ID=Msa0414930-mRNA-1:exon:12795;Parent=Msa0414930-mRNA-1
chr3_2 exon 60888625 60888694 60888625 ID=Msa0414930-mRNA-1:exon:12796;Parent=Msa0414930-mRNA-1
chr3_2 exon 60888918 60889388 60888918 ID=Msa0414930-mRNA-1:exon:12797;Parent=Msa0414930-mRNA-1
chr3_2 exon 60889770 60890285 60889770 ID=Msa0414930-mRNA-1:exon:12798;Parent=Msa0414930-mRNA-1
chr3_2 exon 60890387 60890866 60890387 ID=Msa0414930-mRNA-1:exon:12799;Parent=Msa0414930-mRNA-1
chr3_2 five_prime_UTR 60888204 60888428 60888204 ID=Msa0414930-mRNA-1:five_prime_utr;Parent=Msa0414930-mRNA-1
chr3_2 CDS 60888429 60888481 60888429 ID=Msa0414930-mRNA-1:cds;Parent=Msa0414930-mRNA-1
chr3_2 CDS 60888625 60888694 60888625 ID=Msa0414930-mRNA-1:cds;Parent=Msa0414930-mRNA-1
chr3_2 CDS 60888918 60889388 60888918 ID=Msa0414930-mRNA-1:cds;Parent=Msa0414930-mRNA-1
chr3_2 CDS 60889770 60890285 60889770 ID=Msa0414930-mRNA-1:cds;Parent=Msa0414930-mRNA-1
chr3_2 CDS 60890387 60890866 60890387 ID=Msa0414930-mRNA-1:cds;Parent=Msa0414930-mRNA-1
Gene Sequence

>Msa0414930

ATGGCGGCTAATCCTAATAGACTCTCTCTTGCCATGGAGAGAACTGGCCAATGGGTTTTCTCTCAAGAAGTTCCAACTGATGTTATAGTTGAAGTTGGAGAAGCTCGTTTCTGCCTCCACAAGTTCATGTTGGTGGCAAAGAGCAACTACATCAGAAAACTAATAATGGAATTTTCAGATGAGACTCATCTCACCAGAATAGATCTCTCTGACATACCAGGAGGTCCTGGAATCTTTGAAAAAGCAGCTAAATTCTGTTATGGTGTCAACTTCGAGATAACTGTCCATAATGTCGCAGTTTTACGATGTGCTGCAGAGTTTCTCCAAATGACTGATCAGTATTGTGACAATAACCTCGCTGGCCGGACCGATGAATTTCTCTCTAAAGTCGCCTTCTTCACTCTCACCGGCTCCGTTACAGTCCTCAAGTCTTGCCACCACCTTCTTCCCTATGCCGATGACCTAAACATCGTGGAACGCTGTGTTGAAGCTGCAAGCGCCAAGGCCTGCAGCGAGGCGAATTTCCCTAGCCGCTCACCCGCGAATTGGTGGACCGAAGAACTAGCTGTTCTTGATATCGATTTCTTCAGTAGATCATCAGATTACAGTGAATCAGACATTAGATCAAAACAAAGAAGCCTTCTAGAATCAATTATCAATCTCTTCCCATCGGAGAAAGCAGCTTTTCCGATCAACTTCCTCTGCTGCCTCCTCCGTTGCGCAATCCACCTCCGCGCCTCCACCGTCTGCAAAACCGAACTCGAGAAACGAATCTCAGCAATCCTTGAACACGTAACCGTCGATGACCTCCTCGTGATGTCATTCTCCTACGACGGCGAGAAACTCTTCGATCTAGAAAGCGTTCGCAGAGTCATCTCAGGATTCGTTGAAAAGGAGAAAAACGCAGCGGTTTTCACTCCGGGAGAACTCAAAGAATCATTCTCCGTCGCTATGCTGCGTGTGGCGAAAACCGTCGACATGTACCTCGCTGAAATCGCCGCGTACGGTGAACTCAGCATCTCAAAATTCAATGGAATCGCTGTTCTTATTCCTAAACACGCGCGTAAAATCGACGATGATCTTTACCGCGCCGTTGATATCTATCTCAAGGTTCATCCAAAGCTAGATGAAATCGAAAGAGAGAAAGTATGCAGTATAATGGATCCGTTGAAGCTTTCCTACGAGGCGCGAGTGCATGCGTCACAGAATAAACGGTTACCGGTGCAGATAGTTTTACACGCGCTATACTACGATCAGTTGAAGTTGAGGAGTGGATCAGACGACGGAGAATGCGACGGAGCTTCGACGGAGAGGAATCGTTTAGCGACGGATGTGTCGTTGGTGAGGGAGAATGAGGAGTTACGATCGGAATTGACGAAGATGAAGATGTACATTACGGATATGCAGCAGCAGAAGAACGTTACGCCTGGAACGACGTCGGTGAGTTCGAGTAAGAAGACAACGTTTTTTTCTTCTGTGTCGAAAAAACTGGGAAAGTTGTTCAAAAATGGCGCTAAGGATACGGCCCATTTAGAAGATGGGCCTGTGGATTTGACAAAGCCCAGGAGAAGAAGGTTCTCTATTTCTTAA

Protein sequence

>Msa0414930

MAANPNRLSLAMERTGQWVFSQEVPTDVIVEVGEARFCLHKFMLVAKSNYIRKLIMEFSDETHLTRIDLSDIPGGPGIFEKAAKFCYGVNFEITVHNVAVLRCAAEFLQMTDQYCDNNLAGRTDEFLSKVAFFTLTGSVTVLKSCHHLLPYADDLNIVERCVEAASAKACSEANFPSRSPANWWTEELAVLDIDFFSRSSDYSESDIRSKQRSLLESIINLFPSEKAAFPINFLCCLLRCAIHLRASTVCKTELEKRISAILEHVTVDDLLVMSFSYDGEKLFDLESVRRVISGFVEKEKNAAVFTPGELKESFSVAMLRVAKTVDMYLAEIAAYGELSISKFNGIAVLIPKHARKIDDDLYRAVDIYLKVHPKLDEIEREKVCSIMDPLKLSYEARVHASQNKRLPVQIVLHALYYDQLKLRSGSDDGECDGASTERNRLATDVSLVRENEELRSELTKMKMYITDMQQQKNVTPGTTSVSSSKKTTFFSSVSKKLGKLFKNGAKDTAHLEDGPVDLTKPRRRRFSIS*