AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0368450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0368450 MtrunA17_Chr3g0112121 87.234 423 8 2 1 378 15 436 0.0 742
Msa0368450 MtrunA17_Chr5g0435631 80.615 423 35 3 1 378 16 436 0.0 691
Msa0368450 MtrunA17_Chr4g0009431 74.704 423 61 2 1 378 16 437 0.0 640
Msa0368450 MtrunA17_Chr2g0334101 41.320 409 171 14 11 361 17 414 2.39e-86 268
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0368450 AT2G39730.2 71.868 423 71 2 1 378 16 435 0.0 615
Msa0368450 AT2G39730.3 71.868 423 71 2 1 378 16 435 0.0 615
Msa0368450 AT2G39730.1 71.868 423 71 2 1 378 16 435 0.0 614
Msa0368450 AT1G73110.2 48.675 302 103 7 111 361 31 331 6.79e-89 271
Msa0368450 AT1G73110.1 45.970 335 124 9 78 361 100 428 1.26e-87 271

Find 103 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGTGAGGAAGTGGGTTTC+TGG 0.222183 3_1:+65103064 Msa0368450:intron
CCAATTGGCAGACAAGTATT+TGG 0.242423 3_1:+65103228 Msa0368450:CDS
TGATAGGTTCCTCTCATTCT+TGG 0.246953 3_1:+65101745 Msa0368450:intron
TTCCTCTCATTCTTGGAGTC+TGG 0.255291 3_1:+65101752 Msa0368450:CDS
TTCCTCTTGTGATGTCTTGT+TGG 0.298884 3_1:-65101342 None:intergenic
TCCTCTCATTCTTGGAGTCT+GGG 0.312740 3_1:+65101753 Msa0368450:CDS
TGCTAATCAAGATGCTATTA+AGG 0.353818 3_1:+65103270 Msa0368450:CDS
AACTCACTTGATTCCCATCT+TGG 0.355485 3_1:-65101821 None:intergenic
GTGAAGCCTCTGACATTATC+AGG 0.368067 3_1:+65102541 Msa0368450:CDS
GGAGTTGGTATTGAAACAAT+TGG 0.369327 3_1:+65103085 Msa0368450:CDS
CTAGAAAAGCTGTTGGAGTA+TGG 0.394468 3_1:+65103166 Msa0368450:CDS
ATCTTTGGTTGCTCAAACAC+TGG 0.396595 3_1:-65103139 None:intergenic
CGGAGACAGATGGAGGGGTT+TGG 0.414870 3_1:+65101300 Msa0368450:CDS
GTACAACTTTGACAACACTA+TGG 0.415644 3_1:+65101550 Msa0368450:CDS
AGGAAGTGGGTTTCTGGAGT+TGG 0.432162 3_1:+65103070 Msa0368450:CDS
CCAAATACTTGTCTGCCAAT+TGG 0.435805 3_1:-65103228 None:intergenic
CCAATACGGTCTTCTCTAGT+AGG 0.437673 3_1:-65102828 None:intergenic
GTTTCTAATTCAGCTTTCTT+CGG 0.438269 3_1:+65101172 Msa0368450:CDS
TGAGTGTGGCATTCACCATC+TGG 0.438378 3_1:-65102650 None:intergenic
GAATGTGAAGAGAGTCCAAT+TGG 0.441295 3_1:+65103213 Msa0368450:CDS
CTCTCCAGCACTCATCATGA+TGG 0.446603 3_1:-65102466 None:intergenic
TTCCAGCATCTTGTGGTGCT+TGG 0.450580 3_1:-65101387 None:intergenic
AAGTGTTGAGAAATCGTTAC+CGG 0.452222 3_1:-65102757 None:intergenic
AATTTACATACCTTGATGTT+GGG 0.454354 3_1:-65101644 None:intergenic
GGGTAGGGTCAAGAAATTCT+TGG 0.455278 3_1:-65101624 None:intergenic
GTCGTATGGAGAAGTTCTAC+TGG 0.461112 3_1:+65102802 Msa0368450:CDS
TCTTCCTTGTTGTACATACC+AGG 0.462463 3_1:-65102708 None:intergenic
AAATTTACATACCTTGATGT+TGG 0.464290 3_1:-65101645 None:intergenic
AACTTTGACAACACTATGGA+TGG 0.466779 3_1:+65101554 Msa0368450:CDS
CCAGGGAGTTGGACATTGGT+GGG 0.468336 3_1:-65102690 None:intergenic
TTCATCAACGATCTCGATGC+AGG 0.468728 3_1:+65102585 Msa0368450:CDS
TGAGCTTGTCTTTGCCAAGA+TGG 0.475008 3_1:+65101807 Msa0368450:CDS
ATCGTTACCGGTGACAATGA+TGG 0.477733 3_1:-65102745 None:intergenic
TCTTATGAGTACATTAGTAC+TGG 0.483378 3_1:+65101430 Msa0368450:CDS
TTCCAAGCACCACAAGATGC+TGG 0.484718 3_1:+65101385 Msa0368450:CDS
CATCACAAGAGGAAAGGGTT+TGG 0.488621 3_1:+65101351 Msa0368450:CDS
CGATGCAGGAGCAGGTCGTA+TGG 0.496017 3_1:+65102599 Msa0368450:CDS
TGATAATGTCAGAGGCTTCA+CGG 0.497210 3_1:-65102539 None:intergenic
AACGATCTCGATGCAGGAGC+AGG 0.497933 3_1:+65102591 Msa0368450:CDS
TTGGTCATCTGAAATATCAT+AGG 0.498519 3_1:-65101323 None:intergenic
AGCCCCATCATGATGAGTGC+TGG 0.499726 3_1:+65102462 Msa0368450:intron
GAGCTTGAAAGTGGAAATGC+AGG 0.508166 3_1:+65102486 Msa0368450:CDS
GAGCTTGTCTTTGCCAAGAT+GGG 0.509304 3_1:+65101808 Msa0368450:CDS
TCGTTACCGGTGACAATGAT+GGG 0.516193 3_1:-65102744 None:intergenic
TCTCATCCGTGATGGTCGTA+TGG 0.520006 3_1:+65102788 Msa0368450:CDS
TCCCTTCCTGATAATGTCAG+AGG 0.521414 3_1:-65102547 None:intergenic
TCTCCAGCACTCATCATGAT+GGG 0.521950 3_1:-65102465 None:intergenic
CAAGACATCACAAGAGGAAA+GGG 0.523453 3_1:+65101346 Msa0368450:CDS
ACATACCTTGATGTTGGGTA+GGG 0.523802 3_1:-65101639 None:intergenic
CCAAACACAAAAGTTTCCTC+AGG 0.524555 3_1:+65101226 Msa0368450:CDS
TGGCAAAGACAAGCTCAGCT+TGG 0.525244 3_1:-65101801 None:intergenic
TACATACCTTGATGTTGGGT+AGG 0.527306 3_1:-65101640 None:intergenic
TATTTGGAAGGTGCTGCTCT+TGG 0.530394 3_1:+65103244 Msa0368450:CDS
TTGAATGGCTCAGTAGTAGC+TGG 0.536636 3_1:+65101142 Msa0368450:CDS
CCTCTCATTCTTGGAGTCTG+GGG 0.539615 3_1:+65101754 Msa0368450:CDS
ACCAGGGAGTTGGACATTGG+TGG 0.539763 3_1:-65102691 None:intergenic
CTTGGAGTCTGGGGAGGCAA+AGG 0.540709 3_1:+65101763 Msa0368450:CDS
CTCATTCTTGGAGTCTGGGG+AGG 0.540987 3_1:+65101757 Msa0368450:CDS
ACGTTGCAGATGAGCTTGAA+TGG 0.542906 3_1:+65101127 None:intergenic
ACCCCTCCATCTGTCTCCGT+CGG 0.548680 3_1:-65101296 None:intergenic
CTTGACCCTACCCAACATCA+AGG 0.551721 3_1:+65101634 Msa0368450:CDS
GTCTGGGGAGGCAAAGGACA+AGG 0.552637 3_1:+65101769 Msa0368450:CDS
TGTTGTACATACCAGGGAGT+TGG 0.556562 3_1:-65102701 None:intergenic
CTTCCTTGTTGTACATACCA+GGG 0.559055 3_1:-65102707 None:intergenic
AAAGCTGAATTAGAAACTGT+TGG 0.560874 3_1:-65101166 None:intergenic
GATGACACTAGAAAAGCTGT+TGG 0.561647 3_1:+65103159 Msa0368450:CDS
ACGATGATGAAGTGAGGAAG+TGG 0.566849 3_1:+65103056 Msa0368450:intron
ACAAGCTTGTCCATAAAAGC+AGG 0.567155 3_1:-65101590 None:intergenic
CCCACCAATGTCCAACTCCC+TGG 0.567626 3_1:+65102690 Msa0368450:CDS
AAGCTTGTGAACTCAAAGGA+AGG 0.568791 3_1:+65103112 Msa0368450:CDS
ACAAGACATCACAAGAGGAA+AGG 0.569311 3_1:+65101345 Msa0368450:CDS
GCCTCTGACATTATCAGGAA+GGG 0.569618 3_1:+65102546 Msa0368450:CDS
TTTGGTTGCTCAAACACTGG+TGG 0.574174 3_1:-65103136 None:intergenic
GATGCAGGAGCAGGTCGTAT+GGG 0.579936 3_1:+65102600 Msa0368450:CDS
ATCAGCAATGTTCATGAGTG+TGG 0.586551 3_1:-65102664 None:intergenic
TTGGCAGACAAGTATTTGGA+AGG 0.590350 3_1:+65103232 Msa0368450:CDS
CATACCAGGGAGTTGGACAT+TGG 0.598285 3_1:-65102694 None:intergenic
GACCAACAAGACATCACAAG+AGG 0.598306 3_1:+65101340 Msa0368450:CDS
GCAGGAGCAGGTCGTATGGG+TGG 0.598399 3_1:+65102603 Msa0368450:CDS
AGCCTCTGACATTATCAGGA+AGG 0.599821 3_1:+65102545 Msa0368450:CDS
TATGCTCCTCTCATCCGTGA+TGG 0.599927 3_1:+65102780 Msa0368450:CDS
AGTGCTGGAGAGCTTGAAAG+TGG 0.600135 3_1:+65102477 Msa0368450:CDS
AACAGACCGACGGAGACAGA+TGG 0.601295 3_1:+65101290 Msa0368450:CDS
CCCCAGACTCCAAGAATGAG+AGG 0.602433 3_1:-65101754 None:intergenic
AATCAAGATGCTATTAAGGA+GGG 0.604002 3_1:+65103274 Msa0368450:CDS
GACCGACGGAGACAGATGGA+GGG 0.605937 3_1:+65101294 Msa0368450:CDS
AGCTTGTGAACTCAAAGGAA+GGG 0.606853 3_1:+65103113 Msa0368450:CDS
CTCCAGCACTCATCATGATG+GGG 0.610568 3_1:-65102464 None:intergenic
TAATCAAGATGCTATTAAGG+AGG 0.611873 3_1:+65103273 Msa0368450:CDS
ACCGACGGAGACAGATGGAG+GGG 0.612461 3_1:+65101295 Msa0368450:CDS
AAAGAAGCTTGTGAACTCAA+AGG 0.613555 3_1:+65103108 Msa0368450:CDS
CGATGATGAAGTGAGGAAGT+GGG 0.616122 3_1:+65103057 Msa0368450:intron
AGACCGACGGAGACAGATGG+AGG 0.622548 3_1:+65101293 Msa0368450:CDS
CGTGTGCCCATCATTGTCAC+CGG 0.623900 3_1:+65102738 Msa0368450:CDS
TAATGAGTTCCAGCATCTTG+TGG 0.630506 3_1:-65101394 None:intergenic
CAGGGAGTTGGACATTGGTG+GGG 0.635431 3_1:-65102689 None:intergenic
TCGTATGGAGAAGTTCTACT+GGG 0.642236 3_1:+65102803 Msa0368450:CDS
ATACGACCATCACGGATGAG+AGG 0.646877 3_1:-65102786 None:intergenic
GTTGTTGACAGTGTATTGTG+TGG 0.660705 3_1:-65102628 None:intergenic
ACTTCTCCATACGACCATCA+CGG 0.660717 3_1:-65102794 None:intergenic
ATACACTGTCAACAACCAGA+TGG 0.678952 3_1:+65102635 Msa0368450:CDS
GATGACAGTAAACAGACCGA+CGG 0.702756 3_1:+65101280 Msa0368450:CDS
ACTCCCTGGTATGTACAACA+AGG 0.721701 3_1:+65102704 Msa0368450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACACATTTTATTAATATGTA+TGG + chr3_1:65101476-65101495 Msa0368450:intron 15.0%
!!! ATTTTCATTTTTGTTTTGAT+AGG + chr3_1:65101729-65101748 Msa0368450:intron 15.0%
!!! ACACATTTTATTAATATGTA+TGG + chr3_1:65101476-65101495 Msa0368450:intron 15.0%
!!! ATTTTCATTTTTGTTTTGAT+AGG + chr3_1:65101729-65101748 Msa0368450:intron 15.0%
!! TTTATACATGAAATCTCATA+AGG - chr3_1:65101955-65101974 None:intergenic 20.0%
!! ATTATTATTGCAGATTTCTT+TGG + chr3_1:65103013-65103032 Msa0368450:intron 20.0%
!! TTTATACATGAAATCTCATA+AGG - chr3_1:65101955-65101974 None:intergenic 20.0%
!! ATTATTATTGCAGATTTCTT+TGG + chr3_1:65103013-65103032 Msa0368450:intron 20.0%
! AATTTACATACCTTGATGTT+GGG - chr3_1:65101647-65101666 None:intergenic 25.0%
! AAATTTACATACCTTGATGT+TGG - chr3_1:65101648-65101667 None:intergenic 25.0%
! TAAATTGTCTCTACTATCAT+AGG + chr3_1:65101971-65101990 Msa0368450:intron 25.0%
! AAATTGTCTCTACTATCATA+GGG + chr3_1:65101972-65101991 Msa0368450:intron 25.0%
! ACTTACGACTATAAACTATT+TGG + chr3_1:65102021-65102040 Msa0368450:intron 25.0%
! ATATGTCAATAAGCTGTATT+CGG - chr3_1:65102066-65102085 None:intergenic 25.0%
! ATAAGTTCTTTCAACCATTA+CGG + chr3_1:65102100-65102119 Msa0368450:intron 25.0%
! TTATCTATTGACATATACAC+TGG + chr3_1:65102149-65102168 Msa0368450:intron 25.0%
! ACATTAAATAGACACAAGTT+AGG - chr3_1:65102428-65102447 None:intergenic 25.0%
! AATTTACATACCTTGATGTT+GGG - chr3_1:65101647-65101666 None:intergenic 25.0%
! AAATTTACATACCTTGATGT+TGG - chr3_1:65101648-65101667 None:intergenic 25.0%
! TAAATTGTCTCTACTATCAT+AGG + chr3_1:65101971-65101990 Msa0368450:intron 25.0%
! AAATTGTCTCTACTATCATA+GGG + chr3_1:65101972-65101991 Msa0368450:intron 25.0%
! ACTTACGACTATAAACTATT+TGG + chr3_1:65102021-65102040 Msa0368450:intron 25.0%
! ATATGTCAATAAGCTGTATT+CGG - chr3_1:65102066-65102085 None:intergenic 25.0%
! ATAAGTTCTTTCAACCATTA+CGG + chr3_1:65102100-65102119 Msa0368450:intron 25.0%
! TTATCTATTGACATATACAC+TGG + chr3_1:65102149-65102168 Msa0368450:intron 25.0%
! ACATTAAATAGACACAAGTT+AGG - chr3_1:65102428-65102447 None:intergenic 25.0%
AAAGCTGAATTAGAAACTGT+TGG - chr3_1:65101169-65101188 None:intergenic 30.0%
GTTTCTAATTCAGCTTTCTT+CGG + chr3_1:65101172-65101191 Msa0368450:CDS 30.0%
! TTGGTCATCTGAAATATCAT+AGG - chr3_1:65101326-65101345 None:intergenic 30.0%
TCTTATGAGTACATTAGTAC+TGG + chr3_1:65101430-65101449 Msa0368450:CDS 30.0%
! TGATCTAAAACTTGTGATGA+TGG + chr3_1:65101519-65101538 Msa0368450:intron 30.0%
TGTAGGATTTCAAAGTTATG+AGG - chr3_1:65101914-65101933 None:intergenic 30.0%
CTTGTTTAGTAATCACTTGT+AGG - chr3_1:65101931-65101950 None:intergenic 30.0%
AATTGTCTCTACTATCATAG+GGG + chr3_1:65101973-65101992 Msa0368450:intron 30.0%
TAGCGTATAAAAGCAGTTTA+TGG + chr3_1:65102246-65102265 Msa0368450:intron 30.0%
GATAATGTAACATGCTTCTT+TGG - chr3_1:65102400-65102419 None:intergenic 30.0%
TGCTAATCAAGATGCTATTA+AGG + chr3_1:65103270-65103289 Msa0368450:CDS 30.0%
TAATCAAGATGCTATTAAGG+AGG + chr3_1:65103273-65103292 Msa0368450:CDS 30.0%
AATCAAGATGCTATTAAGGA+GGG + chr3_1:65103274-65103293 Msa0368450:CDS 30.0%
AAAGCTGAATTAGAAACTGT+TGG - chr3_1:65101169-65101188 None:intergenic 30.0%
GTTTCTAATTCAGCTTTCTT+CGG + chr3_1:65101172-65101191 Msa0368450:CDS 30.0%
! TTGGTCATCTGAAATATCAT+AGG - chr3_1:65101326-65101345 None:intergenic 30.0%
TCTTATGAGTACATTAGTAC+TGG + chr3_1:65101430-65101449 Msa0368450:CDS 30.0%
! TGATCTAAAACTTGTGATGA+TGG + chr3_1:65101519-65101538 Msa0368450:intron 30.0%
TGTAGGATTTCAAAGTTATG+AGG - chr3_1:65101914-65101933 None:intergenic 30.0%
CTTGTTTAGTAATCACTTGT+AGG - chr3_1:65101931-65101950 None:intergenic 30.0%
AATTGTCTCTACTATCATAG+GGG + chr3_1:65101973-65101992 Msa0368450:intron 30.0%
TAGCGTATAAAAGCAGTTTA+TGG + chr3_1:65102246-65102265 Msa0368450:intron 30.0%
GATAATGTAACATGCTTCTT+TGG - chr3_1:65102400-65102419 None:intergenic 30.0%
TGCTAATCAAGATGCTATTA+AGG + chr3_1:65103270-65103289 Msa0368450:CDS 30.0%
TAATCAAGATGCTATTAAGG+AGG + chr3_1:65103273-65103292 Msa0368450:CDS 30.0%
AATCAAGATGCTATTAAGGA+GGG + chr3_1:65103274-65103293 Msa0368450:CDS 30.0%
! TTTTGTGTTTGGAAGTCTTG+CGG - chr3_1:65101218-65101237 None:intergenic 35.0%
!! AAAAACTTTGAAGCTTCCTG+AGG - chr3_1:65101245-65101264 None:intergenic 35.0%
!!! ACTTGTGATGATGGTGTTTT+AGG + chr3_1:65101528-65101547 Msa0368450:intron 35.0%
GTACAACTTTGACAACACTA+TGG + chr3_1:65101550-65101569 Msa0368450:CDS 35.0%
AACTTTGACAACACTATGGA+TGG + chr3_1:65101554-65101573 Msa0368450:CDS 35.0%
!! TTACATTGCTCCTGCTTTTA+TGG + chr3_1:65101580-65101599 Msa0368450:CDS 35.0%
TGCTATGACTTAAGCAGAAT+TGG + chr3_1:65101692-65101711 Msa0368450:intron 35.0%
GCTATGACTTAAGCAGAATT+GGG + chr3_1:65101693-65101712 Msa0368450:intron 35.0%
TAATCGAAACATGTCCGTAA+TGG - chr3_1:65102117-65102136 None:intergenic 35.0%
ATACACTGGTGAGACTATTT+AGG + chr3_1:65102163-65102182 Msa0368450:intron 35.0%
!! CTGCTTTTATACGCTATCTT+GGG - chr3_1:65102242-65102261 None:intergenic 35.0%
!! ACTGCTTTTATACGCTATCT+TGG - chr3_1:65102243-65102262 None:intergenic 35.0%
CTGTAAGCTCTTGATAAACA+TGG + chr3_1:65102342-65102361 Msa0368450:intron 35.0%
!! AAGTGTTGAGAAATCGTTAC+CGG - chr3_1:65102760-65102779 None:intergenic 35.0%
CATCTTTAGCGATATTGTCA+TGG - chr3_1:65102875-65102894 None:intergenic 35.0%
! AGATTTCTTTGGTGCATTGA+GGG + chr3_1:65103024-65103043 Msa0368450:intron 35.0%
!! GGAGTTGGTATTGAAACAAT+TGG + chr3_1:65103085-65103104 Msa0368450:CDS 35.0%
AAAGAAGCTTGTGAACTCAA+AGG + chr3_1:65103108-65103127 Msa0368450:CDS 35.0%
!! AGCTTTTCTAGTGTCATCTT+TGG - chr3_1:65103157-65103176 None:intergenic 35.0%
! TTTTGTGTTTGGAAGTCTTG+CGG - chr3_1:65101218-65101237 None:intergenic 35.0%
!! AAAAACTTTGAAGCTTCCTG+AGG - chr3_1:65101245-65101264 None:intergenic 35.0%
!!! ACTTGTGATGATGGTGTTTT+AGG + chr3_1:65101528-65101547 Msa0368450:intron 35.0%
GTACAACTTTGACAACACTA+TGG + chr3_1:65101550-65101569 Msa0368450:CDS 35.0%
AACTTTGACAACACTATGGA+TGG + chr3_1:65101554-65101573 Msa0368450:CDS 35.0%
!! TTACATTGCTCCTGCTTTTA+TGG + chr3_1:65101580-65101599 Msa0368450:CDS 35.0%
TGCTATGACTTAAGCAGAAT+TGG + chr3_1:65101692-65101711 Msa0368450:intron 35.0%
GCTATGACTTAAGCAGAATT+GGG + chr3_1:65101693-65101712 Msa0368450:intron 35.0%
TAATCGAAACATGTCCGTAA+TGG - chr3_1:65102117-65102136 None:intergenic 35.0%
ATACACTGGTGAGACTATTT+AGG + chr3_1:65102163-65102182 Msa0368450:intron 35.0%
!! CTGCTTTTATACGCTATCTT+GGG - chr3_1:65102242-65102261 None:intergenic 35.0%
!! ACTGCTTTTATACGCTATCT+TGG - chr3_1:65102243-65102262 None:intergenic 35.0%
CTGTAAGCTCTTGATAAACA+TGG + chr3_1:65102342-65102361 Msa0368450:intron 35.0%
!! AAGTGTTGAGAAATCGTTAC+CGG - chr3_1:65102760-65102779 None:intergenic 35.0%
CATCTTTAGCGATATTGTCA+TGG - chr3_1:65102875-65102894 None:intergenic 35.0%
! AGATTTCTTTGGTGCATTGA+GGG + chr3_1:65103024-65103043 Msa0368450:intron 35.0%
!! GGAGTTGGTATTGAAACAAT+TGG + chr3_1:65103085-65103104 Msa0368450:CDS 35.0%
AAAGAAGCTTGTGAACTCAA+AGG + chr3_1:65103108-65103127 Msa0368450:CDS 35.0%
!! AGCTTTTCTAGTGTCATCTT+TGG - chr3_1:65103157-65103176 None:intergenic 35.0%
! CCTGAGGAAACTTTTGTGTT+TGG - chr3_1:65101229-65101248 None:intergenic 40.0%
CCAAACACAAAAGTTTCCTC+AGG + chr3_1:65101226-65101245 Msa0368450:CDS 40.0%
TTCCTCTTGTGATGTCTTGT+TGG - chr3_1:65101345-65101364 None:intergenic 40.0%
ACAAGACATCACAAGAGGAA+AGG + chr3_1:65101345-65101364 Msa0368450:CDS 40.0%
CAAGACATCACAAGAGGAAA+GGG + chr3_1:65101346-65101365 Msa0368450:CDS 40.0%
TAATGAGTTCCAGCATCTTG+TGG - chr3_1:65101397-65101416 None:intergenic 40.0%
ACAAGCTTGTCCATAAAAGC+AGG - chr3_1:65101593-65101612 None:intergenic 40.0%
ACATACCTTGATGTTGGGTA+GGG - chr3_1:65101642-65101661 None:intergenic 40.0%
TACATACCTTGATGTTGGGT+AGG - chr3_1:65101643-65101662 None:intergenic 40.0%
TGATAGGTTCCTCTCATTCT+TGG + chr3_1:65101745-65101764 Msa0368450:intron 40.0%
AACTCACTTGATTCCCATCT+TGG - chr3_1:65101824-65101843 None:intergenic 40.0%
AAGCATGTTGTGCATGGAAT+TGG - chr3_1:65101860-65101879 None:intergenic 40.0%
! ACTAGAAAGCATGTTGTGCA+TGG - chr3_1:65101866-65101885 None:intergenic 40.0%
! CTCTGTCTGATCAATTTTGC+TGG - chr3_1:65102516-65102535 None:intergenic 40.0%
! TGATAATGTCAGAGGCTTCA+CGG - chr3_1:65102542-65102561 None:intergenic 40.0%
GTTGTTGACAGTGTATTGTG+TGG - chr3_1:65102631-65102650 None:intergenic 40.0%
ATACACTGTCAACAACCAGA+TGG + chr3_1:65102635-65102654 Msa0368450:CDS 40.0%
ATCAGCAATGTTCATGAGTG+TGG - chr3_1:65102667-65102686 None:intergenic 40.0%
! CTTCCTTGTTGTACATACCA+GGG - chr3_1:65102710-65102729 None:intergenic 40.0%
! TCTTCCTTGTTGTACATACC+AGG - chr3_1:65102711-65102730 None:intergenic 40.0%
TCGTATGGAGAAGTTCTACT+GGG + chr3_1:65102803-65102822 Msa0368450:CDS 40.0%
TTCCAATGCAGACACCAATA+CGG - chr3_1:65102845-65102864 None:intergenic 40.0%
CTTTAGCGATATTGTCATGG+CGG - chr3_1:65102872-65102891 None:intergenic 40.0%
AGATAGGTATACCGATGGAT+TGG - chr3_1:65102929-65102948 None:intergenic 40.0%
CAGATAGATAGGTATACCGA+TGG - chr3_1:65102934-65102953 None:intergenic 40.0%
GGATAGACAGACAGATAGAT+AGG - chr3_1:65102945-65102964 None:intergenic 40.0%
! CAGATTTCTTTGGTGCATTG+AGG + chr3_1:65103023-65103042 Msa0368450:intron 40.0%
AAGCTTGTGAACTCAAAGGA+AGG + chr3_1:65103112-65103131 Msa0368450:CDS 40.0%
AGCTTGTGAACTCAAAGGAA+GGG + chr3_1:65103113-65103132 Msa0368450:CDS 40.0%
ATCTTTGGTTGCTCAAACAC+TGG - chr3_1:65103142-65103161 None:intergenic 40.0%
GATGACACTAGAAAAGCTGT+TGG + chr3_1:65103159-65103178 Msa0368450:CDS 40.0%
CTAGAAAAGCTGTTGGAGTA+TGG + chr3_1:65103166-65103185 Msa0368450:CDS 40.0%
GAATGTGAAGAGAGTCCAAT+TGG + chr3_1:65103213-65103232 Msa0368450:CDS 40.0%
CCAAATACTTGTCTGCCAAT+TGG - chr3_1:65103231-65103250 None:intergenic 40.0%
CCAATTGGCAGACAAGTATT+TGG + chr3_1:65103228-65103247 Msa0368450:CDS 40.0%
TTGGCAGACAAGTATTTGGA+AGG + chr3_1:65103232-65103251 Msa0368450:CDS 40.0%
! CCTGAGGAAACTTTTGTGTT+TGG - chr3_1:65101229-65101248 None:intergenic 40.0%
CCAAACACAAAAGTTTCCTC+AGG + chr3_1:65101226-65101245 Msa0368450:CDS 40.0%
TTCCTCTTGTGATGTCTTGT+TGG - chr3_1:65101345-65101364 None:intergenic 40.0%
ACAAGACATCACAAGAGGAA+AGG + chr3_1:65101345-65101364 Msa0368450:CDS 40.0%
CAAGACATCACAAGAGGAAA+GGG + chr3_1:65101346-65101365 Msa0368450:CDS 40.0%
TAATGAGTTCCAGCATCTTG+TGG - chr3_1:65101397-65101416 None:intergenic 40.0%
ACAAGCTTGTCCATAAAAGC+AGG - chr3_1:65101593-65101612 None:intergenic 40.0%
ACATACCTTGATGTTGGGTA+GGG - chr3_1:65101642-65101661 None:intergenic 40.0%
TACATACCTTGATGTTGGGT+AGG - chr3_1:65101643-65101662 None:intergenic 40.0%
TGATAGGTTCCTCTCATTCT+TGG + chr3_1:65101745-65101764 Msa0368450:intron 40.0%
AACTCACTTGATTCCCATCT+TGG - chr3_1:65101824-65101843 None:intergenic 40.0%
AAGCATGTTGTGCATGGAAT+TGG - chr3_1:65101860-65101879 None:intergenic 40.0%
! ACTAGAAAGCATGTTGTGCA+TGG - chr3_1:65101866-65101885 None:intergenic 40.0%
! CTCTGTCTGATCAATTTTGC+TGG - chr3_1:65102516-65102535 None:intergenic 40.0%
! TGATAATGTCAGAGGCTTCA+CGG - chr3_1:65102542-65102561 None:intergenic 40.0%
GTTGTTGACAGTGTATTGTG+TGG - chr3_1:65102631-65102650 None:intergenic 40.0%
ATACACTGTCAACAACCAGA+TGG + chr3_1:65102635-65102654 Msa0368450:CDS 40.0%
ATCAGCAATGTTCATGAGTG+TGG - chr3_1:65102667-65102686 None:intergenic 40.0%
! CTTCCTTGTTGTACATACCA+GGG - chr3_1:65102710-65102729 None:intergenic 40.0%
! TCTTCCTTGTTGTACATACC+AGG - chr3_1:65102711-65102730 None:intergenic 40.0%
TCGTATGGAGAAGTTCTACT+GGG + chr3_1:65102803-65102822 Msa0368450:CDS 40.0%
TTCCAATGCAGACACCAATA+CGG - chr3_1:65102845-65102864 None:intergenic 40.0%
CTTTAGCGATATTGTCATGG+CGG - chr3_1:65102872-65102891 None:intergenic 40.0%
AGATAGGTATACCGATGGAT+TGG - chr3_1:65102929-65102948 None:intergenic 40.0%
CAGATAGATAGGTATACCGA+TGG - chr3_1:65102934-65102953 None:intergenic 40.0%
GGATAGACAGACAGATAGAT+AGG - chr3_1:65102945-65102964 None:intergenic 40.0%
! CAGATTTCTTTGGTGCATTG+AGG + chr3_1:65103023-65103042 Msa0368450:intron 40.0%
AAGCTTGTGAACTCAAAGGA+AGG + chr3_1:65103112-65103131 Msa0368450:CDS 40.0%
AGCTTGTGAACTCAAAGGAA+GGG + chr3_1:65103113-65103132 Msa0368450:CDS 40.0%
ATCTTTGGTTGCTCAAACAC+TGG - chr3_1:65103142-65103161 None:intergenic 40.0%
GATGACACTAGAAAAGCTGT+TGG + chr3_1:65103159-65103178 Msa0368450:CDS 40.0%
CTAGAAAAGCTGTTGGAGTA+TGG + chr3_1:65103166-65103185 Msa0368450:CDS 40.0%
GAATGTGAAGAGAGTCCAAT+TGG + chr3_1:65103213-65103232 Msa0368450:CDS 40.0%
CCAAATACTTGTCTGCCAAT+TGG - chr3_1:65103231-65103250 None:intergenic 40.0%
CCAATTGGCAGACAAGTATT+TGG + chr3_1:65103228-65103247 Msa0368450:CDS 40.0%
TTGGCAGACAAGTATTTGGA+AGG + chr3_1:65103232-65103251 Msa0368450:CDS 40.0%
TTGAATGGCTCAGTAGTAGC+TGG + chr3_1:65101142-65101161 Msa0368450:CDS 45.0%
GATGACAGTAAACAGACCGA+CGG + chr3_1:65101280-65101299 Msa0368450:CDS 45.0%
GACCAACAAGACATCACAAG+AGG + chr3_1:65101340-65101359 Msa0368450:CDS 45.0%
CATCACAAGAGGAAAGGGTT+TGG + chr3_1:65101351-65101370 Msa0368450:CDS 45.0%
GGGTAGGGTCAAGAAATTCT+TGG - chr3_1:65101627-65101646 None:intergenic 45.0%
TTCCTCTCATTCTTGGAGTC+TGG + chr3_1:65101752-65101771 Msa0368450:CDS 45.0%
TCCTCTCATTCTTGGAGTCT+GGG + chr3_1:65101753-65101772 Msa0368450:CDS 45.0%
TGAGCTTGTCTTTGCCAAGA+TGG + chr3_1:65101807-65101826 Msa0368450:CDS 45.0%
GAGCTTGTCTTTGCCAAGAT+GGG + chr3_1:65101808-65101827 Msa0368450:CDS 45.0%
!! GCTATCTTGGGAGTGCTTAT+TGG - chr3_1:65102230-65102249 None:intergenic 45.0%
TCTCCAGCACTCATCATGAT+GGG - chr3_1:65102468-65102487 None:intergenic 45.0%
GAGCTTGAAAGTGGAAATGC+AGG + chr3_1:65102486-65102505 Msa0368450:CDS 45.0%
GTGAAGCCTCTGACATTATC+AGG + chr3_1:65102541-65102560 Msa0368450:CDS 45.0%
AGCCTCTGACATTATCAGGA+AGG + chr3_1:65102545-65102564 Msa0368450:CDS 45.0%
GCCTCTGACATTATCAGGAA+GGG + chr3_1:65102546-65102565 Msa0368450:CDS 45.0%
! TCCCTTCCTGATAATGTCAG+AGG - chr3_1:65102550-65102569 None:intergenic 45.0%
TTCATCAACGATCTCGATGC+AGG + chr3_1:65102585-65102604 Msa0368450:CDS 45.0%
TGTTGTACATACCAGGGAGT+TGG - chr3_1:65102704-65102723 None:intergenic 45.0%
ACTCCCTGGTATGTACAACA+AGG + chr3_1:65102704-65102723 Msa0368450:CDS 45.0%
TCGTTACCGGTGACAATGAT+GGG - chr3_1:65102747-65102766 None:intergenic 45.0%
ATCGTTACCGGTGACAATGA+TGG - chr3_1:65102748-65102767 None:intergenic 45.0%
ACTTCTCCATACGACCATCA+CGG - chr3_1:65102797-65102816 None:intergenic 45.0%
GTCGTATGGAGAAGTTCTAC+TGG + chr3_1:65102802-65102821 Msa0368450:CDS 45.0%
CCAATACGGTCTTCTCTAGT+AGG - chr3_1:65102831-65102850 None:intergenic 45.0%
CCTACTAGAGAAGACCGTAT+TGG + chr3_1:65102828-65102847 Msa0368450:intron 45.0%
AAGATTGTTGACACCTTCCC+TGG + chr3_1:65102903-65102922 Msa0368450:intron 45.0%
CAAACCGACAAACAGACAGA+CGG - chr3_1:65102978-65102997 None:intergenic 45.0%
GAGTGTACGATGATGAAGTG+AGG + chr3_1:65103050-65103069 Msa0368450:intron 45.0%
ACGATGATGAAGTGAGGAAG+TGG + chr3_1:65103056-65103075 Msa0368450:intron 45.0%
CGATGATGAAGTGAGGAAGT+GGG + chr3_1:65103057-65103076 Msa0368450:intron 45.0%
TTTGGTTGCTCAAACACTGG+TGG - chr3_1:65103139-65103158 None:intergenic 45.0%
!! TATTTGGAAGGTGCTGCTCT+TGG + chr3_1:65103244-65103263 Msa0368450:CDS 45.0%
TTGAATGGCTCAGTAGTAGC+TGG + chr3_1:65101142-65101161 Msa0368450:CDS 45.0%
GATGACAGTAAACAGACCGA+CGG + chr3_1:65101280-65101299 Msa0368450:CDS 45.0%
GACCAACAAGACATCACAAG+AGG + chr3_1:65101340-65101359 Msa0368450:CDS 45.0%
CATCACAAGAGGAAAGGGTT+TGG + chr3_1:65101351-65101370 Msa0368450:CDS 45.0%
GGGTAGGGTCAAGAAATTCT+TGG - chr3_1:65101627-65101646 None:intergenic 45.0%
TTCCTCTCATTCTTGGAGTC+TGG + chr3_1:65101752-65101771 Msa0368450:CDS 45.0%
TCCTCTCATTCTTGGAGTCT+GGG + chr3_1:65101753-65101772 Msa0368450:CDS 45.0%
TGAGCTTGTCTTTGCCAAGA+TGG + chr3_1:65101807-65101826 Msa0368450:CDS 45.0%
GAGCTTGTCTTTGCCAAGAT+GGG + chr3_1:65101808-65101827 Msa0368450:CDS 45.0%
!! GCTATCTTGGGAGTGCTTAT+TGG - chr3_1:65102230-65102249 None:intergenic 45.0%
TCTCCAGCACTCATCATGAT+GGG - chr3_1:65102468-65102487 None:intergenic 45.0%
GAGCTTGAAAGTGGAAATGC+AGG + chr3_1:65102486-65102505 Msa0368450:CDS 45.0%
GTGAAGCCTCTGACATTATC+AGG + chr3_1:65102541-65102560 Msa0368450:CDS 45.0%
AGCCTCTGACATTATCAGGA+AGG + chr3_1:65102545-65102564 Msa0368450:CDS 45.0%
GCCTCTGACATTATCAGGAA+GGG + chr3_1:65102546-65102565 Msa0368450:CDS 45.0%
! TCCCTTCCTGATAATGTCAG+AGG - chr3_1:65102550-65102569 None:intergenic 45.0%
TTCATCAACGATCTCGATGC+AGG + chr3_1:65102585-65102604 Msa0368450:CDS 45.0%
TGTTGTACATACCAGGGAGT+TGG - chr3_1:65102704-65102723 None:intergenic 45.0%
ACTCCCTGGTATGTACAACA+AGG + chr3_1:65102704-65102723 Msa0368450:CDS 45.0%
TCGTTACCGGTGACAATGAT+GGG - chr3_1:65102747-65102766 None:intergenic 45.0%
ATCGTTACCGGTGACAATGA+TGG - chr3_1:65102748-65102767 None:intergenic 45.0%
ACTTCTCCATACGACCATCA+CGG - chr3_1:65102797-65102816 None:intergenic 45.0%
GTCGTATGGAGAAGTTCTAC+TGG + chr3_1:65102802-65102821 Msa0368450:CDS 45.0%
CCAATACGGTCTTCTCTAGT+AGG - chr3_1:65102831-65102850 None:intergenic 45.0%
CCTACTAGAGAAGACCGTAT+TGG + chr3_1:65102828-65102847 Msa0368450:intron 45.0%
AAGATTGTTGACACCTTCCC+TGG + chr3_1:65102903-65102922 Msa0368450:intron 45.0%
CAAACCGACAAACAGACAGA+CGG - chr3_1:65102978-65102997 None:intergenic 45.0%
GAGTGTACGATGATGAAGTG+AGG + chr3_1:65103050-65103069 Msa0368450:intron 45.0%
ACGATGATGAAGTGAGGAAG+TGG + chr3_1:65103056-65103075 Msa0368450:intron 45.0%
CGATGATGAAGTGAGGAAGT+GGG + chr3_1:65103057-65103076 Msa0368450:intron 45.0%
TTTGGTTGCTCAAACACTGG+TGG - chr3_1:65103139-65103158 None:intergenic 45.0%
!! TATTTGGAAGGTGCTGCTCT+TGG + chr3_1:65103244-65103263 Msa0368450:CDS 45.0%
TTCCAAGCACCACAAGATGC+TGG + chr3_1:65101385-65101404 Msa0368450:CDS 50.0%
TTCCAGCATCTTGTGGTGCT+TGG - chr3_1:65101390-65101409 None:intergenic 50.0%
CTTGACCCTACCCAACATCA+AGG + chr3_1:65101634-65101653 Msa0368450:CDS 50.0%
CCTCTCATTCTTGGAGTCTG+GGG + chr3_1:65101754-65101773 Msa0368450:CDS 50.0%
TGGCAAAGACAAGCTCAGCT+TGG - chr3_1:65101804-65101823 None:intergenic 50.0%
CTCCAGCACTCATCATGATG+GGG - chr3_1:65102467-65102486 None:intergenic 50.0%
CTCTCCAGCACTCATCATGA+TGG - chr3_1:65102469-65102488 None:intergenic 50.0%
! AGTGCTGGAGAGCTTGAAAG+TGG + chr3_1:65102477-65102496 Msa0368450:CDS 50.0%
TGAGTGTGGCATTCACCATC+TGG - chr3_1:65102653-65102672 None:intergenic 50.0%
CATACCAGGGAGTTGGACAT+TGG - chr3_1:65102697-65102716 None:intergenic 50.0%
TATGCTCCTCTCATCCGTGA+TGG + chr3_1:65102780-65102799 Msa0368450:CDS 50.0%
ATACGACCATCACGGATGAG+AGG - chr3_1:65102789-65102808 None:intergenic 50.0%
TCTCATCCGTGATGGTCGTA+TGG + chr3_1:65102788-65102807 Msa0368450:CDS 50.0%
! GACCGTATTGGTGTCTGCAT+TGG + chr3_1:65102840-65102859 Msa0368450:intron 50.0%
!! GTATACCGATGGATTGGCCA+GGG - chr3_1:65102923-65102942 None:intergenic 50.0%
CAGACAGACGGACAGATAGA+TGG - chr3_1:65102966-65102985 None:intergenic 50.0%
CTGTCCGTCTGTCTGTTTGT+CGG + chr3_1:65102971-65102990 Msa0368450:intron 50.0%
! GAAGTGAGGAAGTGGGTTTC+TGG + chr3_1:65103064-65103083 Msa0368450:intron 50.0%
!! AGGAAGTGGGTTTCTGGAGT+TGG + chr3_1:65103070-65103089 Msa0368450:CDS 50.0%
TTCCAAGCACCACAAGATGC+TGG + chr3_1:65101385-65101404 Msa0368450:CDS 50.0%
TTCCAGCATCTTGTGGTGCT+TGG - chr3_1:65101390-65101409 None:intergenic 50.0%
CTTGACCCTACCCAACATCA+AGG + chr3_1:65101634-65101653 Msa0368450:CDS 50.0%
CCTCTCATTCTTGGAGTCTG+GGG + chr3_1:65101754-65101773 Msa0368450:CDS 50.0%
TGGCAAAGACAAGCTCAGCT+TGG - chr3_1:65101804-65101823 None:intergenic 50.0%
CTCCAGCACTCATCATGATG+GGG - chr3_1:65102467-65102486 None:intergenic 50.0%
CTCTCCAGCACTCATCATGA+TGG - chr3_1:65102469-65102488 None:intergenic 50.0%
! AGTGCTGGAGAGCTTGAAAG+TGG + chr3_1:65102477-65102496 Msa0368450:CDS 50.0%
TGAGTGTGGCATTCACCATC+TGG - chr3_1:65102653-65102672 None:intergenic 50.0%
CATACCAGGGAGTTGGACAT+TGG - chr3_1:65102697-65102716 None:intergenic 50.0%
TATGCTCCTCTCATCCGTGA+TGG + chr3_1:65102780-65102799 Msa0368450:CDS 50.0%
ATACGACCATCACGGATGAG+AGG - chr3_1:65102789-65102808 None:intergenic 50.0%
TCTCATCCGTGATGGTCGTA+TGG + chr3_1:65102788-65102807 Msa0368450:CDS 50.0%
! GACCGTATTGGTGTCTGCAT+TGG + chr3_1:65102840-65102859 Msa0368450:intron 50.0%
!! GTATACCGATGGATTGGCCA+GGG - chr3_1:65102923-65102942 None:intergenic 50.0%
CAGACAGACGGACAGATAGA+TGG - chr3_1:65102966-65102985 None:intergenic 50.0%
CTGTCCGTCTGTCTGTTTGT+CGG + chr3_1:65102971-65102990 Msa0368450:intron 50.0%
! GAAGTGAGGAAGTGGGTTTC+TGG + chr3_1:65103064-65103083 Msa0368450:intron 50.0%
!! AGGAAGTGGGTTTCTGGAGT+TGG + chr3_1:65103070-65103089 Msa0368450:CDS 50.0%
AACAGACCGACGGAGACAGA+TGG + chr3_1:65101290-65101309 Msa0368450:CDS 55.0%
CCCCAGACTCCAAGAATGAG+AGG - chr3_1:65101757-65101776 None:intergenic 55.0%
CTCATTCTTGGAGTCTGGGG+AGG + chr3_1:65101757-65101776 Msa0368450:CDS 55.0%
AGCCCCATCATGATGAGTGC+TGG + chr3_1:65102462-65102481 Msa0368450:intron 55.0%
AACGATCTCGATGCAGGAGC+AGG + chr3_1:65102591-65102610 Msa0368450:CDS 55.0%
GATGCAGGAGCAGGTCGTAT+GGG + chr3_1:65102600-65102619 Msa0368450:CDS 55.0%
CAGGGAGTTGGACATTGGTG+GGG - chr3_1:65102692-65102711 None:intergenic 55.0%
CCAGGGAGTTGGACATTGGT+GGG - chr3_1:65102693-65102712 None:intergenic 55.0%
ACCAGGGAGTTGGACATTGG+TGG - chr3_1:65102694-65102713 None:intergenic 55.0%
CGTGTGCCCATCATTGTCAC+CGG + chr3_1:65102738-65102757 Msa0368450:CDS 55.0%
ACCTTCCCTGGCCAATCCAT+CGG + chr3_1:65102915-65102934 Msa0368450:intron 55.0%
!! GGTATACCGATGGATTGGCC+AGG - chr3_1:65102924-65102943 None:intergenic 55.0%
AACAGACCGACGGAGACAGA+TGG + chr3_1:65101290-65101309 Msa0368450:CDS 55.0%
CCCCAGACTCCAAGAATGAG+AGG - chr3_1:65101757-65101776 None:intergenic 55.0%
CTCATTCTTGGAGTCTGGGG+AGG + chr3_1:65101757-65101776 Msa0368450:CDS 55.0%
AGCCCCATCATGATGAGTGC+TGG + chr3_1:65102462-65102481 Msa0368450:intron 55.0%
AACGATCTCGATGCAGGAGC+AGG + chr3_1:65102591-65102610 Msa0368450:CDS 55.0%
GATGCAGGAGCAGGTCGTAT+GGG + chr3_1:65102600-65102619 Msa0368450:CDS 55.0%
CAGGGAGTTGGACATTGGTG+GGG - chr3_1:65102692-65102711 None:intergenic 55.0%
CCAGGGAGTTGGACATTGGT+GGG - chr3_1:65102693-65102712 None:intergenic 55.0%
ACCAGGGAGTTGGACATTGG+TGG - chr3_1:65102694-65102713 None:intergenic 55.0%
CGTGTGCCCATCATTGTCAC+CGG + chr3_1:65102738-65102757 Msa0368450:CDS 55.0%
ACCTTCCCTGGCCAATCCAT+CGG + chr3_1:65102915-65102934 Msa0368450:intron 55.0%
!! GGTATACCGATGGATTGGCC+AGG - chr3_1:65102924-65102943 None:intergenic 55.0%
AGACCGACGGAGACAGATGG+AGG + chr3_1:65101293-65101312 Msa0368450:CDS 60.0%
GACCGACGGAGACAGATGGA+GGG + chr3_1:65101294-65101313 Msa0368450:CDS 60.0%
ACCGACGGAGACAGATGGAG+GGG + chr3_1:65101295-65101314 Msa0368450:CDS 60.0%
ACCCCTCCATCTGTCTCCGT+CGG - chr3_1:65101299-65101318 None:intergenic 60.0%
CGGAGACAGATGGAGGGGTT+TGG + chr3_1:65101300-65101319 Msa0368450:CDS 60.0%
CTTGGAGTCTGGGGAGGCAA+AGG + chr3_1:65101763-65101782 Msa0368450:CDS 60.0%
GTCTGGGGAGGCAAAGGACA+AGG + chr3_1:65101769-65101788 Msa0368450:CDS 60.0%
CGATGCAGGAGCAGGTCGTA+TGG + chr3_1:65102599-65102618 Msa0368450:CDS 60.0%
CCCACCAATGTCCAACTCCC+TGG + chr3_1:65102690-65102709 Msa0368450:CDS 60.0%
!! ACCGATGGATTGGCCAGGGA+AGG - chr3_1:65102919-65102938 None:intergenic 60.0%
AGACCGACGGAGACAGATGG+AGG + chr3_1:65101293-65101312 Msa0368450:CDS 60.0%
GACCGACGGAGACAGATGGA+GGG + chr3_1:65101294-65101313 Msa0368450:CDS 60.0%
ACCGACGGAGACAGATGGAG+GGG + chr3_1:65101295-65101314 Msa0368450:CDS 60.0%
ACCCCTCCATCTGTCTCCGT+CGG - chr3_1:65101299-65101318 None:intergenic 60.0%
CGGAGACAGATGGAGGGGTT+TGG + chr3_1:65101300-65101319 Msa0368450:CDS 60.0%
CTTGGAGTCTGGGGAGGCAA+AGG + chr3_1:65101763-65101782 Msa0368450:CDS 60.0%
GTCTGGGGAGGCAAAGGACA+AGG + chr3_1:65101769-65101788 Msa0368450:CDS 60.0%
CGATGCAGGAGCAGGTCGTA+TGG + chr3_1:65102599-65102618 Msa0368450:CDS 60.0%
CCCACCAATGTCCAACTCCC+TGG + chr3_1:65102690-65102709 Msa0368450:CDS 60.0%
!! ACCGATGGATTGGCCAGGGA+AGG - chr3_1:65102919-65102938 None:intergenic 60.0%
GCAGGAGCAGGTCGTATGGG+TGG + chr3_1:65102603-65102622 Msa0368450:CDS 65.0%
GCAGGAGCAGGTCGTATGGG+TGG + chr3_1:65102603-65102622 Msa0368450:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 65101136 65103306 65101136 ID=Msa0368450;Name=Msa0368450
chr3_1 mRNA 65101136 65103306 65101136 ID=Msa0368450-mRNA-1;Parent=Msa0368450;Name=Msa0368450-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.75|0.6|1|1|1|5|0|378
chr3_1 exon 65101136 65101461 65101136 ID=Msa0368450-mRNA-1:exon:13033;Parent=Msa0368450-mRNA-1
chr3_1 exon 65101550 65101655 65101550 ID=Msa0368450-mRNA-1:exon:13034;Parent=Msa0368450-mRNA-1
chr3_1 exon 65101751 65101836 65101751 ID=Msa0368450-mRNA-1:exon:13035;Parent=Msa0368450-mRNA-1
chr3_1 exon 65102464 65102843 65102464 ID=Msa0368450-mRNA-1:exon:13036;Parent=Msa0368450-mRNA-1
chr3_1 exon 65103068 65103306 65103068 ID=Msa0368450-mRNA-1:exon:13037;Parent=Msa0368450-mRNA-1
chr3_1 CDS 65101136 65101461 65101136 ID=Msa0368450-mRNA-1:cds;Parent=Msa0368450-mRNA-1
chr3_1 CDS 65101550 65101655 65101550 ID=Msa0368450-mRNA-1:cds;Parent=Msa0368450-mRNA-1
chr3_1 CDS 65101751 65101836 65101751 ID=Msa0368450-mRNA-1:cds;Parent=Msa0368450-mRNA-1
chr3_1 CDS 65102464 65102843 65102464 ID=Msa0368450-mRNA-1:cds;Parent=Msa0368450-mRNA-1
chr3_1 CDS 65103068 65103306 65103068 ID=Msa0368450-mRNA-1:cds;Parent=Msa0368450-mRNA-1
Gene Sequence

>Msa0368450

ATGAGCTTGAATGGCTCAGTAGTAGCTGGACCAACAGTTTCTAATTCAGCTTTCTTCGGAACAAGCTTGAAGAAGCTTACCGCAAGACTTCCAAACACAAAAGTTTCCTCAGGAAGCTTCAAAGTTTTTGCTGCTAAAGAGATCGATGACAGTAAACAGACCGACGGAGACAGATGGAGGGGTTTGGCCTATGATATTTCAGATGACCAACAAGACATCACAAGAGGAAAGGGTTTGGTTGATTCAGTTTTCCAAGCACCACAAGATGCTGGAACTCATTATGCAGTCATGAGTTCTTATGAGTACATTAGTACTGGACTTAAACAGTACAACTTTGACAACACTATGGATGGATTTTACATTGCTCCTGCTTTTATGGACAAGCTTGTTGTTCACATCACCAAGAATTTCTTGACCCTACCCAACATCAAGGTTCCTCTCATTCTTGGAGTCTGGGGAGGCAAAGGACAAGGAAAATCTTTCCAAGCTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGCTTGAAAGTGGAAATGCAGGAGAGCCAGCAAAATTGATCAGACAGAGATACCGTGAAGCCTCTGACATTATCAGGAAGGGAAAGATGTGTTGTTTGTTCATCAACGATCTCGATGCAGGAGCAGGTCGTATGGGTGGAACCACACAATACACTGTCAACAACCAGATGGTGAATGCCACACTCATGAACATTGCTGATAACCCCACCAATGTCCAACTCCCTGGTATGTACAACAAGGAAGACAACGCACGTGTGCCCATCATTGTCACCGGTAACGATTTCTCAACACTTTATGCTCCTCTCATCCGTGATGGTCGTATGGAGAAGTTCTACTGGGCTCCTACTAGAGAAGACCTGAGGAAGTGGGTTTCTGGAGTTGGTATTGAAACAATTGGAAAGAAGCTTGTGAACTCAAAGGAAGGGCCACCAGTGTTTGAGCAACCAAAGATGACACTAGAAAAGCTGTTGGAGTATGGTAACATGCTTGTCTCAGAACAAGAGAATGTGAAGAGAGTCCAATTGGCAGACAAGTATTTGGAAGGTGCTGCTCTTGGTGATGCTAATCAAGATGCTATTAAGGAGGGAAAATTCTAG

Protein sequence

>Msa0368450

MSLNGSVVAGPTVSNSAFFGTSLKKLTARLPNTKVSSGSFKVFAAKEIDDSKQTDGDRWRGLAYDISDDQQDITRGKGLVDSVFQAPQDAGTHYAVMSSYEYISTGLKQYNFDNTMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQAELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDIIRKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDLRKWVSGVGIETIGKKLVNSKEGPPVFEQPKMTLEKLLEYGNMLVSEQENVKRVQLADKYLEGAALGDANQDAIKEGKF*