Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004310 | XP_003621060.1 | 88.372 | 172 | 20 | 0 | 2 | 173 | 7 | 178 | 5.12e-109 | 318 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004310 | sp|Q93WI9|HD3A_ORYSJ | 64.706 | 170 | 59 | 1 | 2 | 171 | 9 | 177 | 6.79e-80 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004310 | F8T7T3 | 88.372 | 172 | 20 | 0 | 2 | 173 | 7 | 178 | 2.45e-109 | 318 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa1004310 | 0.823116 | 1.647365e-53 | -8.615850e-47 |
| Msa0011060 | Msa1004310 | 0.813360 | 2.662808e-51 | -8.615850e-47 |
| Msa0025060 | Msa1004310 | 0.821446 | 4.020031e-53 | -8.615850e-47 |
| Msa0025090 | Msa1004310 | 0.819482 | 1.134714e-52 | -8.615850e-47 |
| Msa0032890 | Msa1004310 | 0.837384 | 5.366371e-57 | -8.615850e-47 |
| Msa0032930 | Msa1004310 | 0.816276 | 6.010909e-52 | -8.615850e-47 |
| Msa0048410 | Msa1004310 | 0.802067 | 6.687232e-49 | -8.615850e-47 |
| Msa0049670 | Msa1004310 | 0.813103 | 3.031939e-51 | -8.615850e-47 |
| Msa0053260 | Msa1004310 | 0.817693 | 2.888124e-52 | -8.615850e-47 |
| Msa0056220 | Msa1004310 | 0.822242 | 2.630354e-53 | -8.615850e-47 |
| Msa0056230 | Msa1004310 | 0.816833 | 4.510614e-52 | -8.615850e-47 |
| Msa0072590 | Msa1004310 | 0.813354 | 2.670152e-51 | -8.615850e-47 |
| Msa0080060 | Msa1004310 | 0.848203 | 7.118559e-60 | -8.615850e-47 |
| Msa0081700 | Msa1004310 | 0.822254 | 2.613789e-53 | -8.615850e-47 |
| Msa0091300 | Msa1004310 | 0.820319 | 7.302169e-53 | -8.615850e-47 |
| Msa0098500 | Msa1004310 | 0.820511 | 6.599567e-53 | -8.615850e-47 |
| Msa0098750 | Msa1004310 | 0.824578 | 7.479828e-54 | -8.615850e-47 |
| Msa0099090 | Msa1004310 | 0.803126 | 4.045416e-49 | -8.615850e-47 |
| Msa0611450 | Msa1004310 | 0.814986 | 1.164880e-51 | -8.615850e-47 |
| Msa0625550 | Msa1004310 | 0.813659 | 2.288849e-51 | -8.615850e-47 |
| Msa0635070 | Msa1004310 | 0.803826 | 2.895639e-49 | -8.615850e-47 |
| Msa0651720 | Msa1004310 | 0.825726 | 4.006777e-54 | -8.615850e-47 |
| Msa0654400 | Msa1004310 | 0.836925 | 7.031673e-57 | -8.615850e-47 |
| Msa0654500 | Msa1004310 | 0.835096 | 2.046789e-56 | -8.615850e-47 |
| Msa0656570 | Msa1004310 | 0.800530 | 1.380238e-48 | -8.615850e-47 |
| Msa0676290 | Msa1004310 | 0.836801 | 7.562740e-57 | -8.615850e-47 |
| Msa0694170 | Msa1004310 | 0.802162 | 6.394715e-49 | -8.615850e-47 |
| Msa0701800 | Msa1004310 | 0.801110 | 1.051063e-48 | -8.615850e-47 |
| Msa0708840 | Msa1004310 | 0.810290 | 1.240736e-50 | -8.615850e-47 |
| Msa0711110 | Msa1004310 | 0.803766 | 2.980770e-49 | -8.615850e-47 |
| Msa0722660 | Msa1004310 | 0.821526 | 3.852699e-53 | -8.615850e-47 |
| Msa0742690 | Msa1004310 | 0.819412 | 1.177234e-52 | -8.615850e-47 |
| Msa0762390 | Msa1004310 | 0.800028 | 1.746168e-48 | -8.615850e-47 |
| Msa0779830 | Msa1004310 | 0.821024 | 5.030506e-53 | -8.615850e-47 |
| Msa0801320 | Msa1004310 | 0.811430 | 7.027507e-51 | -8.615850e-47 |
| Msa0807130 | Msa1004310 | 0.805593 | 1.238888e-49 | -8.615850e-47 |
| Msa0827560 | Msa1004310 | 0.820711 | 5.936078e-53 | -8.615850e-47 |
| Msa0139930 | Msa1004310 | 0.941237 | 5.897946e-101 | -8.615850e-47 |
| Msa0172110 | Msa1004310 | 0.801533 | 8.608857e-49 | -8.615850e-47 |
| Msa0173580 | Msa1004310 | 0.834814 | 2.410367e-56 | -8.615850e-47 |
| Msa0174060 | Msa1004310 | 0.811818 | 5.788684e-51 | -8.615850e-47 |
| Msa0183960 | Msa1004310 | 0.803417 | 3.521263e-49 | -8.615850e-47 |
| Msa0198140 | Msa1004310 | 0.814312 | 1.643048e-51 | -8.615850e-47 |
| Msa0198220 | Msa1004310 | 0.811294 | 7.523471e-51 | -8.615850e-47 |
| Msa0228360 | Msa1004310 | 0.802219 | 6.225231e-49 | -8.615850e-47 |
| Msa0368450 | Msa1004310 | 0.809414 | 1.915157e-50 | -8.615850e-47 |
| Msa0378620 | Msa1004310 | 0.803787 | 2.950202e-49 | -8.615850e-47 |
| Msa0384330 | Msa1004310 | 0.804396 | 2.203881e-49 | -8.615850e-47 |
| Msa0414510 | Msa1004310 | 0.810621 | 1.052606e-50 | -8.615850e-47 |
| Msa0427890 | Msa1004310 | 0.814391 | 1.578067e-51 | -8.615850e-47 |
| Msa0432260 | Msa1004310 | 0.819621 | 1.054743e-52 | -8.615850e-47 |
| Msa0452120 | Msa1004310 | 0.830347 | 3.091217e-55 | -8.615850e-47 |
| Msa0460080 | Msa1004310 | 0.815519 | 8.868817e-52 | -8.615850e-47 |
| Msa0461620 | Msa1004310 | 0.804419 | 2.180317e-49 | -8.615850e-47 |
| Msa0474120 | Msa1004310 | 0.809565 | 1.777222e-50 | -8.615850e-47 |
| Msa0475690 | Msa1004310 | 0.805100 | 1.571148e-49 | -8.615850e-47 |
| Msa0476730 | Msa1004310 | 0.822967 | 1.784283e-53 | -8.615850e-47 |
| Msa0478660 | Msa1004310 | 0.803777 | 2.964649e-49 | -8.615850e-47 |
| Msa1004310 | Msa1004630 | 0.828543 | 8.481727e-55 | -8.615850e-47 |
| Msa1004310 | Msa1004660 | 0.845576 | 3.726355e-59 | -8.615850e-47 |
| Msa1004310 | Msa1011140 | 0.803237 | 3.837223e-49 | -8.615850e-47 |
| Msa1004310 | Msa1038570 | 0.817464 | 3.253935e-52 | -8.615850e-47 |
| Msa1004310 | Msa1045940 | 0.920575 | 1.076195e-87 | -8.615850e-47 |
| Msa1004310 | Msa1046980 | 0.828173 | 1.041519e-54 | -8.615850e-47 |
| Msa1004310 | Msa1046990 | 0.921069 | 5.738110e-88 | -8.615850e-47 |
| Msa1004310 | Msa1050280 | 0.823228 | 1.550805e-53 | -8.615850e-47 |
| Msa1004310 | Msa1055520 | 0.802868 | 4.574125e-49 | -8.615850e-47 |
| Msa1004310 | Msa1057940 | 0.826696 | 2.354634e-54 | -8.615850e-47 |
| Msa1004310 | Msa1078280 | 0.825746 | 3.962261e-54 | -8.615850e-47 |
| Msa1004310 | Msa1085570 | 0.807825 | 4.183971e-50 | -8.615850e-47 |
| Msa1004310 | Msa1090020 | 0.801256 | 9.809406e-49 | -8.615850e-47 |
| Msa1004310 | Msa1091130 | 0.829707 | 4.427462e-55 | -8.615850e-47 |
| Msa1004310 | Msa1112210 | 0.803422 | 3.512773e-49 | -8.615850e-47 |
| Msa1004310 | Msa1112230 | 0.805270 | 1.447360e-49 | -8.615850e-47 |
| Msa1004310 | Msa1123490 | 0.831578 | 1.541799e-55 | -8.615850e-47 |
| Msa1004310 | Msa1129160 | 0.823709 | 1.197051e-53 | -8.615850e-47 |
| Msa1004310 | Msa1134430 | 0.896779 | 2.658433e-76 | -8.615850e-47 |
| Msa1004310 | Msa1134460 | 0.818515 | 1.882819e-52 | -8.615850e-47 |
| Msa1004310 | Msa1134480 | 0.822884 | 1.865332e-53 | -8.615850e-47 |
| Msa1004310 | Msa1158280 | 0.806708 | 7.213503e-50 | -8.615850e-47 |
| Msa1004310 | Msa1169590 | 0.813776 | 2.156827e-51 | -8.615850e-47 |
| Msa1004310 | Msa1169780 | 0.823419 | 1.399269e-53 | -8.615850e-47 |
| Msa1004310 | Msa1181370 | 0.825747 | 3.961047e-54 | -8.615850e-47 |
| Msa1004310 | Msa1194480 | 0.817009 | 4.117475e-52 | -8.615850e-47 |
| Msa1004310 | Msa1199540 | 0.812450 | 4.213309e-51 | -8.615850e-47 |
| Msa1004310 | Msa1203090 | 0.835042 | 2.112201e-56 | -8.615850e-47 |
| Msa1004310 | Msa1213470 | 0.810136 | 1.339469e-50 | -8.615850e-47 |
| Msa1004310 | Msa1219530 | 0.813733 | 2.204197e-51 | -8.615850e-47 |
| Msa1004310 | Msa1235990 | 0.803268 | 3.780017e-49 | -8.615850e-47 |
| Msa1004310 | Msa1279200 | 0.803788 | 2.949845e-49 | -8.615850e-47 |
| Msa1004310 | Msa1290090 | 0.806301 | 8.790589e-50 | -8.615850e-47 |
| Msa1004310 | Msa1300370 | 0.810399 | 1.175255e-50 | -8.615850e-47 |
| Msa1004310 | Msa1305970 | 0.828680 | 7.856075e-55 | -8.615850e-47 |
| Msa1004310 | Msa1320550 | 0.802324 | 5.921726e-49 | -8.615850e-47 |
| Msa1004310 | Msa1333220 | 0.815471 | 9.090932e-52 | -8.615850e-47 |
| Msa1004310 | Msa1359880 | 0.800317 | 1.525689e-48 | -8.615850e-47 |
| Msa1004310 | Msa1380180 | 0.820123 | 8.101441e-53 | -8.615850e-47 |
| Msa1004310 | Msa1389670 | 0.823245 | 1.536374e-53 | -8.615850e-47 |
| Msa1004310 | Msa1395360 | 0.820301 | 7.373040e-53 | -8.615850e-47 |
| Msa1004310 | Msa1397560 | 0.809145 | 2.186525e-50 | -8.615850e-47 |
| Msa1004310 | Msa1407770 | 0.801818 | 7.526108e-49 | -8.615850e-47 |
| Msa1004310 | Msa1409360 | 0.814255 | 1.691214e-51 | -8.615850e-47 |
| Msa1004310 | Msa1421520 | 0.810487 | 1.124994e-50 | -8.615850e-47 |
| Msa1004310 | Msa1422820 | 0.815405 | 9.402314e-52 | -8.615850e-47 |
| Msa1004310 | Msa1426690 | 0.801650 | 8.145461e-49 | -8.615850e-47 |
| Msa1004310 | Msa1433060 | 0.814886 | 1.225979e-51 | -8.615850e-47 |
| Msa1004310 | Msa1448840 | 0.802705 | 4.942206e-49 | -8.615850e-47 |
| Msa1004310 | Msa1454330 | 0.801591 | 8.375446e-49 | -8.615850e-47 |
| Msa1004310 | Msa1459130 | 0.806175 | 9.344558e-50 | -8.615850e-47 |
| Msa0258280 | Msa1004310 | 0.813389 | 2.623736e-51 | -8.615850e-47 |
| Msa0259770 | Msa1004310 | 0.802760 | 4.815063e-49 | -8.615850e-47 |
| Msa0278340 | Msa1004310 | 0.813702 | 2.239110e-51 | -8.615850e-47 |
| Msa0304350 | Msa1004310 | 0.800305 | 1.533891e-48 | -8.615850e-47 |
| Msa0305440 | Msa1004310 | 0.810512 | 1.111282e-50 | -8.615850e-47 |
| Msa0315390 | Msa1004310 | 0.808391 | 3.169408e-50 | -8.615850e-47 |
| Msa0362440 | Msa1004310 | 0.837301 | 5.633774e-57 | -8.615850e-47 |
| Msa0483160 | Msa1004310 | 0.820513 | 6.593722e-53 | -8.615850e-47 |
| Msa0502900 | Msa1004310 | 0.816655 | 4.943756e-52 | -8.615850e-47 |
| Msa0506090 | Msa1004310 | 0.803525 | 3.344633e-49 | -8.615850e-47 |
| Msa0522730 | Msa1004310 | 0.813280 | 2.772076e-51 | -8.615850e-47 |
| Msa0533610 | Msa1004310 | 0.822470 | 2.328342e-53 | -8.615850e-47 |
| Msa0545750 | Msa1004310 | 0.826595 | 2.488724e-54 | -8.615850e-47 |
| Msa0559440 | Msa1004310 | 0.840603 | 7.873466e-58 | -8.615850e-47 |
| Msa0559640 | Msa1004310 | 0.838616 | 2.587573e-57 | -8.615850e-47 |
| Msa0560010 | Msa1004310 | 0.800030 | 1.744793e-48 | -8.615850e-47 |
| Msa0564580 | Msa1004310 | 0.810482 | 1.127715e-50 | -8.615850e-47 |
| Msa0567490 | Msa1004310 | 0.806146 | 9.478733e-50 | -8.615850e-47 |
| Msa0567530 | Msa1004310 | 0.814033 | 1.893100e-51 | -8.615850e-47 |
| Msa0575960 | Msa1004310 | 0.820651 | 6.129107e-53 | -8.615850e-47 |
| Msa0577960 | Msa1004310 | 0.813661 | 2.285928e-51 | -8.615850e-47 |
| Msa0589930 | Msa1004310 | 0.814652 | 1.381693e-51 | -8.615850e-47 |
| Msa0601470 | Msa1004310 | 0.805333 | 1.404426e-49 | -8.615850e-47 |
| Msa0862750 | Msa1004310 | 0.821988 | 3.012829e-53 | -8.615850e-47 |
| Msa0869320 | Msa1004310 | 0.823679 | 1.216592e-53 | -8.615850e-47 |
| Msa0870220 | Msa1004310 | 0.853416 | 2.424610e-61 | -8.615850e-47 |
| Msa0903460 | Msa1004310 | 0.838962 | 2.105079e-57 | -8.615850e-47 |
| Msa0906100 | Msa1004310 | 0.803734 | 3.025809e-49 | -8.615850e-47 |
| Msa0933050 | Msa1004310 | 0.803358 | 3.621854e-49 | -8.615850e-47 |
| Msa0934290 | Msa1004310 | 0.825745 | 3.963775e-54 | -8.615850e-47 |
| Msa0935930 | Msa1004310 | 0.847808 | 9.146094e-60 | -8.615850e-47 |
| Msa0945520 | Msa1004310 | 0.831079 | 2.045373e-55 | -8.615850e-47 |
| Msa0946570 | Msa1004310 | 0.804301 | 2.306739e-49 | -8.615850e-47 |
| Msa0956600 | Msa1004310 | 0.811207 | 7.859050e-51 | -8.615850e-47 |
| Msa0963800 | Msa1004310 | 0.801007 | 1.103106e-48 | -8.615850e-47 |
| Msa0971780 | Msa1004310 | 0.825452 | 4.652587e-54 | -8.615850e-47 |
| Msa0972930 | Msa1004310 | 0.847821 | 9.070254e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004310 | MtrunA17_Chr7g0214771 | 88.372 | 172 | 20 | 0 | 2 | 173 | 7 | 178 | 4.71e-113 | 318 |
| Msa1004310 | MtrunA17_Chr7g0214761 | 88.439 | 173 | 20 | 0 | 1 | 173 | 6 | 178 | 6.27e-112 | 315 |
| Msa1004310 | MtrunA17_Chr6g0461711 | 67.647 | 170 | 54 | 1 | 2 | 171 | 7 | 175 | 8.36e-82 | 239 |
| Msa1004310 | MtrunA17_Chr7g0252784 | 66.667 | 168 | 55 | 1 | 2 | 169 | 7 | 173 | 1.21e-79 | 234 |
| Msa1004310 | MtrunA17_Chr7g0252800 | 61.905 | 168 | 63 | 1 | 2 | 169 | 8 | 174 | 5.78e-73 | 217 |
| Msa1004310 | MtrunA17_Chr7g0252811 | 60.736 | 163 | 62 | 2 | 8 | 170 | 35 | 195 | 8.72e-69 | 207 |
| Msa1004310 | MtrunA17_Chr6g0472451 | 56.805 | 169 | 72 | 1 | 1 | 169 | 5 | 172 | 1.02e-66 | 201 |
| Msa1004310 | MtrunA17_Chr7g0266201 | 55.689 | 167 | 72 | 2 | 4 | 169 | 9 | 174 | 1.69e-62 | 190 |
| Msa1004310 | MtrunA17_Chr1g0178751 | 53.125 | 160 | 72 | 2 | 2 | 159 | 7 | 165 | 1.12e-58 | 181 |
| Msa1004310 | MtrunA17_Chr2g0321301 | 48.521 | 169 | 85 | 2 | 2 | 169 | 6 | 173 | 1.11e-56 | 176 |
| Msa1004310 | MtrunA17_Chr8g0392741 | 48.824 | 170 | 84 | 3 | 1 | 169 | 6 | 173 | 8.60e-47 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1004310 | AT1G65480.2 | 64.118 | 170 | 60 | 1 | 2 | 171 | 51 | 219 | 1.41e-80 | 238 |
| Msa1004310 | AT1G65480.1 | 64.118 | 170 | 60 | 1 | 2 | 171 | 7 | 175 | 1.42e-80 | 236 |
| Msa1004310 | AT4G20370.1 | 62.130 | 169 | 63 | 1 | 2 | 170 | 7 | 174 | 2.42e-76 | 226 |
| Msa1004310 | AT5G62040.1 | 53.988 | 163 | 74 | 1 | 4 | 165 | 8 | 170 | 9.23e-61 | 186 |
| Msa1004310 | AT5G03840.1 | 53.892 | 167 | 75 | 2 | 4 | 169 | 12 | 177 | 4.71e-59 | 182 |
| Msa1004310 | AT2G27550.1 | 49.704 | 169 | 84 | 1 | 2 | 169 | 7 | 175 | 1.59e-57 | 178 |
| Msa1004310 | AT1G18100.1 | 50.292 | 171 | 81 | 3 | 1 | 169 | 5 | 173 | 6.96e-51 | 161 |
Find 57 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTGGTGGGTTAACTATT+TGG | 0.101664 | 7_1:+1796319 | None:intergenic |
| TTACAAATTCAGTGTCTTTC+AGG | 0.122353 | 7_1:-1796395 | Msa1004310:CDS |
| TGCTTTGATAATTTGCTTAT+TGG | 0.192847 | 7_1:+1796495 | None:intergenic |
| AAAGACACTGAATTTGTAAA+AGG | 0.219593 | 7_1:+1796399 | None:intergenic |
| CTTGTTGTTGGTGGTGTAAT+TGG | 0.225955 | 7_1:-1796435 | Msa1004310:CDS |
| TTTGCAGAAGTTTACAATCT+TGG | 0.279344 | 7_1:-1793502 | Msa1004310:CDS |
| TGAATCCCTCTTGTTGGTCT+TGG | 0.316500 | 7_1:+1793610 | None:intergenic |
| TCTTGGTGGGTTAACTATTT+GGG | 0.334065 | 7_1:+1796320 | None:intergenic |
| CCCTGTAGTCGCTGGAATAT+TGG | 0.340527 | 7_1:+1793981 | None:intergenic |
| TCAGTAGGGCTTGGTGCATC+AGG | 0.356176 | 7_1:+1795543 | None:intergenic |
| TACAGGTATTCCCTCATATT+AGG | 0.366238 | 7_1:+1795519 | None:intergenic |
| TTGTGGTTATAATTATTAGA+TGG | 0.404057 | 7_1:+1793414 | None:intergenic |
| TTTCCACCAACTTGAACTCT+TGG | 0.407751 | 7_1:+1796303 | None:intergenic |
| CCAGAGTGTGTAGGGTTCTC+AGG | 0.411027 | 7_1:+1796277 | None:intergenic |
| TGTTGTTTAAGCAACCTTGT+AGG | 0.415361 | 7_1:-1793573 | Msa1004310:CDS |
| CCACCAACTTGAACTCTTGG+TGG | 0.429744 | 7_1:+1796306 | None:intergenic |
| TACAAATTCAGTGTCTTTCA+GGG | 0.444238 | 7_1:-1796394 | Msa1004310:CDS |
| GCCCTACTGATCCTAATATG+AGG | 0.445100 | 7_1:-1795530 | Msa1004310:CDS |
| TGTCAACGAGAAAGTGGTTC+CGG | 0.448740 | 7_1:-1793451 | Msa1004310:CDS |
| ACCAATATTCCAGCGACTAC+AGG | 0.450659 | 7_1:-1793982 | Msa1004310:CDS |
| ATATGAGGGAATACCTGTAT+TGG | 0.453295 | 7_1:-1795515 | Msa1004310:intron |
| ACACGATGAATCCCTCTTGT+TGG | 0.458184 | 7_1:+1793604 | None:intergenic |
| TTCAATTGTCAACGAGAAAG+TGG | 0.476637 | 7_1:-1793457 | Msa1004310:CDS |
| TTGAAATAGAGAGCAGCAAC+AGG | 0.483630 | 7_1:+1793475 | None:intergenic |
| ATGAATTCCCTTGTTGTTGG+TGG | 0.489339 | 7_1:-1796444 | Msa1004310:CDS |
| CTCAAGGTTTGTGGTTGTTG+TGG | 0.492802 | 7_1:+1793397 | None:intergenic |
| TATCTACTACTCAAGGTTTG+TGG | 0.499893 | 7_1:+1793388 | None:intergenic |
| AAATTCAAACTTACCAATAC+AGG | 0.502537 | 7_1:+1795502 | None:intergenic |
| GCGACTACAGGGACAACATT+CGG | 0.503478 | 7_1:-1793970 | Msa1004310:intron |
| AATGTTGTCCCTGTAGTCGC+TGG | 0.506880 | 7_1:+1793973 | None:intergenic |
| CACCAACTTGAACTCTTGGT+GGG | 0.509185 | 7_1:+1796307 | None:intergenic |
| TATACCAACCAGAGTGTGTA+GGG | 0.509279 | 7_1:+1796269 | None:intergenic |
| ATATTAGGATCAGTAGGGCT+TGG | 0.509781 | 7_1:+1795534 | None:intergenic |
| AAGACACTGAATTTGTAAAA+GGG | 0.531689 | 7_1:+1796400 | None:intergenic |
| GCTAATATAGTGTGCCTACA+AGG | 0.535198 | 7_1:+1793559 | None:intergenic |
| CCACCAAGAGTTCAAGTTGG+TGG | 0.538019 | 7_1:-1796306 | Msa1004310:CDS |
| GATGGTTAGCCTCCTTCCAC+CGG | 0.542124 | 7_1:+1793432 | None:intergenic |
| GAGAAAGTGGTTCCGGTGGA+AGG | 0.542228 | 7_1:-1793444 | Msa1004310:CDS |
| CAGTAGGGCTTGGTGCATCA+GGG | 0.543914 | 7_1:+1795544 | None:intergenic |
| TCAATGAATTCCCTTGTTGT+TGG | 0.548648 | 7_1:-1796447 | Msa1004310:CDS |
| CCCTCATATTAGGATCAGTA+GGG | 0.548872 | 7_1:+1795529 | None:intergenic |
| TTATAGATATCTACTACTCA+AGG | 0.561415 | 7_1:+1793381 | None:intergenic |
| CCCTACTGATCCTAATATGA+GGG | 0.564661 | 7_1:-1795529 | Msa1004310:CDS |
| GAAAATCCAAGACCAACAAG+AGG | 0.566107 | 7_1:-1793616 | Msa1004310:CDS |
| CCTGAGAACCCTACACACTC+TGG | 0.566847 | 7_1:-1796277 | Msa1004310:intron |
| CAATTACACCACCAACAACA+AGG | 0.568356 | 7_1:+1796436 | None:intergenic |
| TCCCTCATATTAGGATCAGT+AGG | 0.580960 | 7_1:+1795528 | None:intergenic |
| CCAATATTCCAGCGACTACA+GGG | 0.601358 | 7_1:-1793981 | Msa1004310:CDS |
| GGTGGGTTAACTATTTGGGA+CGG | 0.602001 | 7_1:+1796324 | None:intergenic |
| GTATACCAACCAGAGTGTGT+AGG | 0.613080 | 7_1:+1796268 | None:intergenic |
| AAAATCCAAGACCAACAAGA+GGG | 0.616950 | 7_1:-1793615 | Msa1004310:CDS |
| CAACGAGAAAGTGGTTCCGG+TGG | 0.628002 | 7_1:-1793448 | Msa1004310:CDS |
| AAAGTGGTTCCGGTGGAAGG+AGG | 0.632372 | 7_1:-1793441 | Msa1004310:CDS |
| AACCCACCAAGAGTTCAAGT+TGG | 0.642757 | 7_1:-1796309 | Msa1004310:CDS |
| AATAACAAAGAAGTCATCAA+CGG | 0.645377 | 7_1:-1796360 | Msa1004310:CDS |
| AATTACACCACCAACAACAA+GGG | 0.656428 | 7_1:+1796437 | None:intergenic |
| AACAAAGAAGTCATCAACGG+TGG | 0.689200 | 7_1:-1796357 | Msa1004310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCATATTTTTATTTGTTT+CGG | - | chr7_1:1794296-1794315 | Msa1004310:intron | 10.0% |
| !! | TTATTTATTAAAGATCTATT+TGG | + | chr7_1:1794645-1794664 | None:intergenic | 10.0% |
| !! | ATTCCAAAAATATTATAAAT+TGG | + | chr7_1:1794811-1794830 | None:intergenic | 10.0% |
| !!! | TAATATTTTTGGAATTTATA+AGG | - | chr7_1:1794816-1794835 | Msa1004310:intron | 10.0% |
| !! | TTGTATAAATATTCAAAAAA+TGG | + | chr7_1:1794851-1794870 | None:intergenic | 10.0% |
| !!! | AATTTTTTAATAATTTAGCA+TGG | - | chr7_1:1795007-1795026 | Msa1004310:intron | 10.0% |
| !!! | ATACATTTTTATATATAACA+AGG | - | chr7_1:1795882-1795901 | Msa1004310:intron | 10.0% |
| !!! | TACATTTTTATATATAACAA+GGG | - | chr7_1:1795883-1795902 | Msa1004310:intron | 10.0% |
| !!! | ATCATTGTTATTTTTTTTAA+AGG | + | chr7_1:1796398-1796417 | None:intergenic | 10.0% |
| !! | GATTATGTGTTAATTAATTT+GGG | + | chr7_1:1794033-1794052 | None:intergenic | 15.0% |
| !! | TGATTATGTGTTAATTAATT+TGG | + | chr7_1:1794034-1794053 | None:intergenic | 15.0% |
| !! | AACAAATAAAAATATGATTG+TGG | + | chr7_1:1794295-1794314 | None:intergenic | 15.0% |
| !! | TGATAAATATTATTATGTCT+TGG | - | chr7_1:1794328-1794347 | Msa1004310:intron | 15.0% |
| !! | TATTATTCATAAAGTTGTTA+AGG | - | chr7_1:1794501-1794520 | Msa1004310:intron | 15.0% |
| !!! | CAACCAATTTATAATATTTT+TGG | - | chr7_1:1794805-1794824 | Msa1004310:intron | 15.0% |
| !!! | TATATTTTTCATGAATTCAA+AGG | + | chr7_1:1795161-1795180 | None:intergenic | 15.0% |
| !!! | AAAAAAAAAGTGTTGTATTT+AGG | - | chr7_1:1795471-1795490 | Msa1004310:intron | 15.0% |
| !! | TTTCTATATAAAAATCTCCT+TGG | + | chr7_1:1793567-1793586 | None:intergenic | 20.0% |
| !! | TATAGAAATTAGAGTTGAAA+CGG | - | chr7_1:1793579-1793598 | Msa1004310:CDS | 20.0% |
| !!! | AGTTTTTCACCTTTTTTTTA+AGG | + | chr7_1:1793929-1793948 | None:intergenic | 20.0% |
| !! | TTGTATTGAAGTAATGTTAT+TGG | + | chr7_1:1794066-1794085 | None:intergenic | 20.0% |
| !! | AATACAAACTAAACCTAATT+GGG | - | chr7_1:1794079-1794098 | Msa1004310:intron | 20.0% |
| !!! | CTTTCACTAATTAAAGATTT+TGG | + | chr7_1:1794121-1794140 | None:intergenic | 20.0% |
| !! | ATATTCAAAAAATGGTAAGT+TGG | + | chr7_1:1794843-1794862 | None:intergenic | 20.0% |
| !! | AGTGTAAGAACAAATAATTT+GGG | + | chr7_1:1794898-1794917 | None:intergenic | 20.0% |
| !! | TAGTGTAAGAACAAATAATT+TGG | + | chr7_1:1794899-1794918 | None:intergenic | 20.0% |
| !! | GAAAAATATAACTTCAATTG+TGG | - | chr7_1:1795171-1795190 | Msa1004310:intron | 20.0% |
| !! | TCAAAATAAAGATAAACAGT+GGG | + | chr7_1:1795311-1795330 | None:intergenic | 20.0% |
| !! | ATCAAAATAAAGATAAACAG+TGG | + | chr7_1:1795312-1795331 | None:intergenic | 20.0% |
| !!! | GTTTATCTTTATTTTGATGA+TGG | - | chr7_1:1795314-1795333 | Msa1004310:intron | 20.0% |
| !! | TATTTAGGTCAGAAAATAAT+TGG | - | chr7_1:1795486-1795505 | Msa1004310:intron | 20.0% |
| !! | TTGTGGTTATAATTATTAGA+TGG | + | chr7_1:1796323-1796342 | None:intergenic | 20.0% |
| !!! | TGCTTTGATAATTTGCTTAT+TGG | + | chr7_1:1793242-1793261 | None:intergenic | 25.0% |
| ! | AAGACACTGAATTTGTAAAA+GGG | + | chr7_1:1793337-1793356 | None:intergenic | 25.0% |
| ! | AAAGACACTGAATTTGTAAA+AGG | + | chr7_1:1793338-1793357 | None:intergenic | 25.0% |
| ! | AATAACAAAGAAGTCATCAA+CGG | - | chr7_1:1793374-1793393 | Msa1004310:three_prime_UTR | 25.0% |
| !!! | TTATTTCTTTTGAACAACCA+AGG | - | chr7_1:1793547-1793566 | Msa1004310:CDS | 25.0% |
| ! | GGTTATATACAAAGTATAAG+AGG | - | chr7_1:1793607-1793626 | Msa1004310:CDS | 25.0% |
| ! | AAGTAACTTTCTTCTATGTT+TGG | + | chr7_1:1793670-1793689 | None:intergenic | 25.0% |
| ! | TTAAGAGACATTAATCCATA+AGG | - | chr7_1:1793691-1793710 | Msa1004310:intron | 25.0% |
| !!! | GACATAACTTTTTTTCTGAA+AGG | + | chr7_1:1793724-1793743 | None:intergenic | 25.0% |
| ! | AGTTCAAATTGCCAAATTAA+TGG | - | chr7_1:1793826-1793845 | Msa1004310:intron | 25.0% |
| ! | AAACTCCTTCCTTAAAAAAA+AGG | - | chr7_1:1793917-1793936 | Msa1004310:intron | 25.0% |
| !!! | TTTCACCTTTTTTTTAAGGA+AGG | + | chr7_1:1793925-1793944 | None:intergenic | 25.0% |
| ! | CAATACAAACTAAACCTAAT+TGG | - | chr7_1:1794078-1794097 | Msa1004310:intron | 25.0% |
| !!! | ATTAGTGAAAGCTTTTTTCT+AGG | - | chr7_1:1794130-1794149 | Msa1004310:intron | 25.0% |
| !!! | TTAGTGAAAGCTTTTTTCTA+GGG | - | chr7_1:1794131-1794150 | Msa1004310:intron | 25.0% |
| ! | AAATTCAAACTTACCAATAC+AGG | + | chr7_1:1794235-1794254 | None:intergenic | 25.0% |
| !!! | ATATTTTAAGAGTGCGTTTT+AGG | - | chr7_1:1794425-1794444 | Msa1004310:intron | 25.0% |
| !!! | TATTTTAAGAGTGCGTTTTA+GGG | - | chr7_1:1794426-1794445 | Msa1004310:intron | 25.0% |
| ! | AAAAATAAGCCAAACAAAAG+AGG | + | chr7_1:1794452-1794471 | None:intergenic | 25.0% |
| !! | TTTTTGATAAGTCAATTCAC+TGG | + | chr7_1:1794951-1794970 | None:intergenic | 25.0% |
| ! | AATACACAACTTATGATTTG+CGG | - | chr7_1:1794972-1794991 | Msa1004310:intron | 25.0% |
| ! | ATAGTTCATTCTTTGCAATT+TGG | - | chr7_1:1795261-1795280 | Msa1004310:intron | 25.0% |
| ! | ATGCATTTGAACAATGTTTA+TGG | - | chr7_1:1795364-1795383 | Msa1004310:intron | 25.0% |
| !! | TTTTTATATATAACAAGGGC+CGG | - | chr7_1:1795887-1795906 | Msa1004310:intron | 25.0% |
| !!! | CACGTTGTTTTATTAATTGT+AGG | - | chr7_1:1796076-1796095 | Msa1004310:intron | 25.0% |
| ! | TTATAGATATCTACTACTCA+AGG | + | chr7_1:1796356-1796375 | None:intergenic | 25.0% |
| TTACAAATTCAGTGTCTTTC+AGG | - | chr7_1:1793339-1793358 | Msa1004310:three_prime_UTR | 30.0% | |
| TACAAATTCAGTGTCTTTCA+GGG | - | chr7_1:1793340-1793359 | Msa1004310:three_prime_UTR | 30.0% | |
| AATTAGAGTTGAAACGGTTT+AGG | - | chr7_1:1793585-1793604 | Msa1004310:CDS | 30.0% | |
| ATTAGAGTTGAAACGGTTTA+GGG | - | chr7_1:1793586-1793605 | Msa1004310:CDS | 30.0% | |
| TATACAAAGTATAAGAGGCA+TGG | - | chr7_1:1793612-1793631 | Msa1004310:CDS | 30.0% | |
| TAACTTTCTTCTATGTTTGG+AGG | + | chr7_1:1793667-1793686 | None:intergenic | 30.0% | |
| !! | CTTAGAAACGGTTTTTGATT+AGG | + | chr7_1:1793756-1793775 | None:intergenic | 30.0% |
| CTAGAAATGGCAATAAGTTT+CGG | + | chr7_1:1793805-1793824 | None:intergenic | 30.0% | |
| GCAATTTGAACTACTAGAAA+TGG | + | chr7_1:1793818-1793837 | None:intergenic | 30.0% | |
| GACAATATTTCTTGTAGTGA+AGG | + | chr7_1:1793855-1793874 | None:intergenic | 30.0% | |
| !! | CTTGGTATTGTTTTGTTCAA+TGG | - | chr7_1:1794346-1794365 | Msa1004310:intron | 30.0% |
| CTATAGGACTTAAATTTGGT+TGG | + | chr7_1:1794924-1794943 | None:intergenic | 30.0% | |
| ! | ATACACAACTTATGATTTGC+GGG | - | chr7_1:1794973-1794992 | Msa1004310:intron | 30.0% |
| ACCATTTCCCTCTTTATTAT+TGG | - | chr7_1:1795710-1795729 | Msa1004310:intron | 30.0% | |
| TCCAATAATAAAGAGGGAAA+TGG | + | chr7_1:1795714-1795733 | None:intergenic | 30.0% | |
| TAGCGATCCAATAATAAAGA+GGG | + | chr7_1:1795720-1795739 | None:intergenic | 30.0% | |
| ATAGCGATCCAATAATAAAG+AGG | + | chr7_1:1795721-1795740 | None:intergenic | 30.0% | |
| TTATTATTGGATCGCTATAC+AGG | - | chr7_1:1795723-1795742 | Msa1004310:intron | 30.0% | |
| ! | TGGCTAGAATTCACATTTTA+AGG | + | chr7_1:1795942-1795961 | None:intergenic | 30.0% |
| !!! | TTTTTTGTCAAGTAGTCTAG+TGG | + | chr7_1:1795962-1795981 | None:intergenic | 30.0% |
| ! | ATAAAATTTTGTCTCGATCG+AGG | + | chr7_1:1796202-1796221 | None:intergenic | 30.0% |
| TTTGCAGAAGTTTACAATCT+TGG | - | chr7_1:1796232-1796251 | Msa1004310:intron | 30.0% | |
| ! | TCAATGAATTCCCTTGTTGT+TGG | - | chr7_1:1793287-1793306 | Msa1004310:three_prime_UTR | 35.0% |
| AATTACACCACCAACAACAA+GGG | + | chr7_1:1793300-1793319 | None:intergenic | 35.0% | |
| !! | TCTTGGTGGGTTAACTATTT+GGG | + | chr7_1:1793417-1793436 | None:intergenic | 35.0% |
| TTCAACTGCAGTCTTAGAAA+CGG | + | chr7_1:1793768-1793787 | None:intergenic | 35.0% | |
| AGTGAAGGTTGCCATTAATT+TGG | + | chr7_1:1793840-1793859 | None:intergenic | 35.0% | |
| !! | TTGCTGTTACATGCAACTTT+TGG | + | chr7_1:1793889-1793908 | None:intergenic | 35.0% |
| !! | GATTTTGGATCCTTCTAAGA+TGG | + | chr7_1:1794106-1794125 | None:intergenic | 35.0% |
| !!! | TTCTAGGGTTTTTGACTTTG+TGG | - | chr7_1:1794146-1794165 | Msa1004310:intron | 35.0% |
| TACAGGTATTCCCTCATATT+AGG | + | chr7_1:1794218-1794237 | None:intergenic | 35.0% | |
| ATATGAGGGAATACCTGTAT+TGG | - | chr7_1:1794219-1794238 | Msa1004310:intron | 35.0% | |
| TTGATAAGTCAATTCACTGG+CGG | + | chr7_1:1794948-1794967 | None:intergenic | 35.0% | |
| ! | TCACTCATGTTTGTTGAACT+TGG | + | chr7_1:1795113-1795132 | None:intergenic | 35.0% |
| GGATAAACAATAGAACCAAG+TGG | - | chr7_1:1795192-1795211 | Msa1004310:intron | 35.0% | |
| CTTTATTCTATTCGCTCACA+AGG | + | chr7_1:1795411-1795430 | None:intergenic | 35.0% | |
| GTGATGTGATAGACAAAACA+AGG | - | chr7_1:1795568-1795587 | Msa1004310:intron | 35.0% | |
| GAGGGAAATGGTAATTAGAA+TGG | + | chr7_1:1795702-1795721 | None:intergenic | 35.0% | |
| !!! | CACATTTTAAGGTGAGTAAG+TGG | + | chr7_1:1795931-1795950 | None:intergenic | 35.0% |
| AAAATCCAAGACCAACAAGA+GGG | - | chr7_1:1796119-1796138 | Msa1004310:intron | 35.0% | |
| ! | TGTTGTTTAAGCAACCTTGT+AGG | - | chr7_1:1796161-1796180 | Msa1004310:intron | 35.0% |
| TTCAATTGTCAACGAGAAAG+TGG | - | chr7_1:1796277-1796296 | Msa1004310:intron | 35.0% | |
| TATCTACTACTCAAGGTTTG+TGG | + | chr7_1:1796349-1796368 | None:intergenic | 35.0% | |
| !! | ATGAATTCCCTTGTTGTTGG+TGG | - | chr7_1:1793290-1793309 | Msa1004310:three_prime_UTR | 40.0% |
| CAATTACACCACCAACAACA+AGG | + | chr7_1:1793301-1793320 | None:intergenic | 40.0% | |
| !! | CTTGTTGTTGGTGGTGTAAT+TGG | - | chr7_1:1793299-1793318 | Msa1004310:three_prime_UTR | 40.0% |
| AACAAAGAAGTCATCAACGG+TGG | - | chr7_1:1793377-1793396 | Msa1004310:three_prime_UTR | 40.0% | |
| !! | CTCTTGGTGGGTTAACTATT+TGG | + | chr7_1:1793418-1793437 | None:intergenic | 40.0% |
| TTTCCACCAACTTGAACTCT+TGG | + | chr7_1:1793434-1793453 | None:intergenic | 40.0% | |
| TATACCAACCAGAGTGTGTA+GGG | + | chr7_1:1793468-1793487 | None:intergenic | 40.0% | |
| !!! | CTCATTTTTCAAGTGCCACA+AGG | - | chr7_1:1793947-1793966 | Msa1004310:intron | 40.0% |
| !!! | ATTTTTCAAGTGCCACAAGG+TGG | - | chr7_1:1793950-1793969 | Msa1004310:intron | 40.0% |
| GTGGGTAAAGGTTACATACA+AGG | + | chr7_1:1793985-1794004 | None:intergenic | 40.0% | |
| ! | GGGATTTTTCGTTATCCATG+TGG | + | chr7_1:1794013-1794032 | None:intergenic | 40.0% |
| !! | CTTCTAAGATGGTCCCAATT+AGG | + | chr7_1:1794095-1794114 | None:intergenic | 40.0% |
| CTAATTGGGACCATCTTAGA+AGG | - | chr7_1:1794093-1794112 | Msa1004310:intron | 40.0% | |
| ATATTAGGATCAGTAGGGCT+TGG | + | chr7_1:1794203-1794222 | None:intergenic | 40.0% | |
| CCCTCATATTAGGATCAGTA+GGG | + | chr7_1:1794208-1794227 | None:intergenic | 40.0% | |
| CCCTACTGATCCTAATATGA+GGG | - | chr7_1:1794205-1794224 | Msa1004310:intron | 40.0% | |
| TCCCTCATATTAGGATCAGT+AGG | + | chr7_1:1794209-1794228 | None:intergenic | 40.0% | |
| !!! | GTTTTAGGGCCTCTTTTGTT+TGG | - | chr7_1:1794440-1794459 | Msa1004310:intron | 40.0% |
| CGGGCTATAGGACTTAAATT+TGG | + | chr7_1:1794928-1794947 | None:intergenic | 40.0% | |
| TGATAAGTCAATTCACTGGC+GGG | + | chr7_1:1794947-1794966 | None:intergenic | 40.0% | |
| TATTGGATCGCTATACAGGA+TGG | - | chr7_1:1795727-1795746 | Msa1004310:intron | 40.0% | |
| GTCTCTGAGTATAGATCAGT+TGG | - | chr7_1:1795851-1795870 | Msa1004310:intron | 40.0% | |
| GAAAATCCAAGACCAACAAG+AGG | - | chr7_1:1796118-1796137 | Msa1004310:intron | 40.0% | |
| GCTAATATAGTGTGCCTACA+AGG | + | chr7_1:1796178-1796197 | None:intergenic | 40.0% | |
| TTGAAATAGAGAGCAGCAAC+AGG | + | chr7_1:1796262-1796281 | None:intergenic | 40.0% | |
| !! | GGTGGGTTAACTATTTGGGA+CGG | + | chr7_1:1793413-1793432 | None:intergenic | 45.0% |
| AACCCACCAAGAGTTCAAGT+TGG | - | chr7_1:1793425-1793444 | Msa1004310:exon | 45.0% | |
| CACCAACTTGAACTCTTGGT+GGG | + | chr7_1:1793430-1793449 | None:intergenic | 45.0% | |
| GTATACCAACCAGAGTGTGT+AGG | + | chr7_1:1793469-1793488 | None:intergenic | 45.0% | |
| GTTATCCATGTGGCAGTTGT+GGG | + | chr7_1:1794003-1794022 | None:intergenic | 45.0% | |
| TTGACTTTGTGGCACTTTGC+AGG | - | chr7_1:1794157-1794176 | Msa1004310:intron | 45.0% | |
| GCCCTACTGATCCTAATATG+AGG | - | chr7_1:1794204-1794223 | Msa1004310:intron | 45.0% | |
| ACTTGGTCACATCTTGTGCA+TGG | + | chr7_1:1795096-1795115 | None:intergenic | 45.0% | |
| CACAGACACAAGAAACCACT+TGG | + | chr7_1:1795210-1795229 | None:intergenic | 45.0% | |
| ! | ATTCGCTCACAAGGTGTCTA+CGG | + | chr7_1:1795402-1795421 | None:intergenic | 45.0% |
| ACCAATATTCCAGCGACTAC+AGG | - | chr7_1:1795752-1795771 | Msa1004310:intron | 45.0% | |
| CCAATATTCCAGCGACTACA+GGG | - | chr7_1:1795753-1795772 | Msa1004310:intron | 45.0% | |
| AAGGTGAGTAAGTGGAGTGT+CGG | + | chr7_1:1795923-1795942 | None:intergenic | 45.0% | |
| ! | TGAATCCCTCTTGTTGGTCT+TGG | + | chr7_1:1796127-1796146 | None:intergenic | 45.0% |
| ACACGATGAATCCCTCTTGT+TGG | + | chr7_1:1796133-1796152 | None:intergenic | 45.0% | |
| TGTCAACGAGAAAGTGGTTC+CGG | - | chr7_1:1796283-1796302 | Msa1004310:CDS | 45.0% | |
| CTCAAGGTTTGTGGTTGTTG+TGG | + | chr7_1:1796340-1796359 | None:intergenic | 45.0% | |
| !! | TTTCTATATAATTAAAAAAA+TGG | - | chr7_1:1794722-1794741 | Msa1004310:intron | 5.0% |
| CCACCAACTTGAACTCTTGG+TGG | + | chr7_1:1793431-1793450 | None:intergenic | 50.0% | |
| !! | CCACCAAGAGTTCAAGTTGG+TGG | - | chr7_1:1793428-1793447 | Msa1004310:exon | 50.0% |
| AGAACCCTACACACTCTGGT+TGG | - | chr7_1:1793461-1793480 | Msa1004310:CDS | 50.0% | |
| ! | CTGAAAGGCGCATGACCTTA+TGG | + | chr7_1:1793709-1793728 | None:intergenic | 50.0% |
| TTCAAGTGCCACAAGGTGGT+TGG | - | chr7_1:1793954-1793973 | Msa1004310:intron | 50.0% | |
| ! | AGGCTTTTCCAACCACCTTG+TGG | + | chr7_1:1793965-1793984 | None:intergenic | 50.0% |
| CATGTGGCAGTTGTGGGTAA+AGG | + | chr7_1:1793997-1794016 | None:intergenic | 50.0% | |
| CTTTACCCACAACTGCCACA+TGG | - | chr7_1:1793995-1794014 | Msa1004310:intron | 50.0% | |
| CGTTATCCATGTGGCAGTTG+TGG | + | chr7_1:1794004-1794023 | None:intergenic | 50.0% | |
| TTGTGGCACTTTGCAGGTGA+TGG | - | chr7_1:1794163-1794182 | Msa1004310:intron | 50.0% | |
| !! | TCAATTCACTGGCGGGCTAT+AGG | + | chr7_1:1794940-1794959 | None:intergenic | 50.0% |
| ! | TTCGCTCACAAGGTGTCTAC+GGG | + | chr7_1:1795401-1795420 | None:intergenic | 50.0% |
| CCCTGTAGTCGCTGGAATAT+TGG | + | chr7_1:1795756-1795775 | None:intergenic | 50.0% | |
| AATGTTGTCCCTGTAGTCGC+TGG | + | chr7_1:1795764-1795783 | None:intergenic | 50.0% | |
| GCGACTACAGGGACAACATT+CGG | - | chr7_1:1795764-1795783 | Msa1004310:intron | 50.0% | |
| ! | AGGTGAGTAAGTGGAGTGTC+GGG | + | chr7_1:1795922-1795941 | None:intergenic | 50.0% |
| CCAGAGTGTGTAGGGTTCTC+AGG | + | chr7_1:1793460-1793479 | None:intergenic | 55.0% | |
| CCTGAGAACCCTACACACTC+TGG | - | chr7_1:1793457-1793476 | Msa1004310:CDS | 55.0% | |
| !! | CAGTAGGGCTTGGTGCATCA+GGG | + | chr7_1:1794193-1794212 | None:intergenic | 55.0% |
| !! | TCAGTAGGGCTTGGTGCATC+AGG | + | chr7_1:1794194-1794213 | None:intergenic | 55.0% |
| ! | CAAGGTGTCTACGGGATGGA+TGG | + | chr7_1:1795393-1795412 | None:intergenic | 55.0% |
| ! | CTCACAAGGTGTCTACGGGA+TGG | + | chr7_1:1795397-1795416 | None:intergenic | 55.0% |
| !! | GGTGAGTAAGTGGAGTGTCG+GGG | + | chr7_1:1795921-1795940 | None:intergenic | 55.0% |
| CAACGAGAAAGTGGTTCCGG+TGG | - | chr7_1:1796286-1796305 | Msa1004310:CDS | 55.0% | |
| GAGAAAGTGGTTCCGGTGGA+AGG | - | chr7_1:1796290-1796309 | Msa1004310:CDS | 55.0% | |
| AAAGTGGTTCCGGTGGAAGG+AGG | - | chr7_1:1796293-1796312 | Msa1004310:CDS | 55.0% | |
| !! | GATGGTTAGCCTCCTTCCAC+CGG | + | chr7_1:1796305-1796324 | None:intergenic | 55.0% |
| !! | GAGTGTCGGGGTTCGAACAC+CGG | + | chr7_1:1795909-1795928 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 1793239 | 1796517 | 1793239 | ID=Msa1004310;Name=Msa1004310 |
| chr7_1 | mRNA | 1793239 | 1796517 | 1793239 | ID=Msa1004310-mRNA-1;Parent=Msa1004310;Name=Msa1004310-mRNA-1;_AED=0.03;_eAED=0.03;_QI=51|1|1|1|1|1|4|190|173 |
| chr7_1 | exon | 1793239 | 1793658 | 1793239 | ID=Msa1004310-mRNA-1:exon:716;Parent=Msa1004310-mRNA-1 |
| chr7_1 | exon | 1793971 | 1794011 | 1793971 | ID=Msa1004310-mRNA-1:exon:715;Parent=Msa1004310-mRNA-1 |
| chr7_1 | exon | 1795516 | 1795577 | 1795516 | ID=Msa1004310-mRNA-1:exon:714;Parent=Msa1004310-mRNA-1 |
| chr7_1 | exon | 1796278 | 1796517 | 1796278 | ID=Msa1004310-mRNA-1:exon:713;Parent=Msa1004310-mRNA-1 |
| chr7_1 | five_prime_UTR | 1796467 | 1796517 | 1796467 | ID=Msa1004310-mRNA-1:five_prime_utr;Parent=Msa1004310-mRNA-1 |
| chr7_1 | CDS | 1796278 | 1796466 | 1796278 | ID=Msa1004310-mRNA-1:cds;Parent=Msa1004310-mRNA-1 |
| chr7_1 | CDS | 1795516 | 1795577 | 1795516 | ID=Msa1004310-mRNA-1:cds;Parent=Msa1004310-mRNA-1 |
| chr7_1 | CDS | 1793971 | 1794011 | 1793971 | ID=Msa1004310-mRNA-1:cds;Parent=Msa1004310-mRNA-1 |
| chr7_1 | CDS | 1793429 | 1793658 | 1793429 | ID=Msa1004310-mRNA-1:cds;Parent=Msa1004310-mRNA-1 |
| chr7_1 | three_prime_UTR | 1793239 | 1793428 | 1793239 | ID=Msa1004310-mRNA-1:three_prime_utr;Parent=Msa1004310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
