Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0758230 | XP_003612111.1 | 99.142 | 233 | 2 | 0 | 1 | 233 | 1 | 233 | 5.39e-167 | 470 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0758230 | sp|P43557|FMP32_YEAST | 33.121 | 157 | 105 | 0 | 76 | 232 | 50 | 206 | 1.12e-25 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0758230 | G7KGC7 | 99.142 | 233 | 2 | 0 | 1 | 233 | 1 | 233 | 2.57e-167 | 470 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004060 | Msa0758230 | 0.801142 | 1.035165e-48 | -8.615850e-47 |
| Msa0015140 | Msa0758230 | 0.806865 | 6.683640e-50 | -8.615850e-47 |
| Msa0047280 | Msa0758230 | 0.813258 | 2.802923e-51 | -8.615850e-47 |
| Msa0100800 | Msa0758230 | 0.807851 | 4.129755e-50 | -8.615850e-47 |
| Msa0108870 | Msa0758230 | 0.806061 | 9.876802e-50 | -8.615850e-47 |
| Msa0118000 | Msa0758230 | 0.832270 | 1.040298e-55 | -8.615850e-47 |
| Msa0619920 | Msa0758230 | 0.821241 | 4.482709e-53 | -8.615850e-47 |
| Msa0633760 | Msa0758230 | 0.807799 | 4.236088e-50 | -8.615850e-47 |
| Msa0644660 | Msa0758230 | 0.814638 | 1.391066e-51 | -8.615850e-47 |
| Msa0664760 | Msa0758230 | 0.805296 | 1.429840e-49 | -8.615850e-47 |
| Msa0682090 | Msa0758230 | 0.805204 | 1.494073e-49 | -8.615850e-47 |
| Msa0682140 | Msa0758230 | 0.809025 | 2.319993e-50 | -8.615850e-47 |
| Msa0683140 | Msa0758230 | 0.804572 | 2.025356e-49 | -8.615850e-47 |
| Msa0716420 | Msa0758230 | -0.804980 | 1.664477e-49 | -8.615850e-47 |
| Msa0739690 | Msa0758230 | 0.802358 | 5.826708e-49 | -8.615850e-47 |
| Msa0748920 | Msa0758230 | 0.822961 | 1.790315e-53 | -8.615850e-47 |
| Msa0758230 | Msa0798290 | 0.806950 | 6.412635e-50 | -8.615850e-47 |
| Msa0758230 | Msa0799010 | -0.815902 | 7.287597e-52 | -8.615850e-47 |
| Msa0758230 | Msa0799580 | 0.847579 | 1.057751e-59 | -8.615850e-47 |
| Msa0758230 | Msa0818770 | 0.821165 | 4.667732e-53 | -8.615850e-47 |
| Msa0758230 | Msa0830390 | 0.823782 | 1.150840e-53 | -8.615850e-47 |
| Msa0758230 | Msa0837850 | 0.843278 | 1.545851e-58 | -8.615850e-47 |
| Msa0758230 | Msa0888990 | 0.819310 | 1.242186e-52 | -8.615850e-47 |
| Msa0758230 | Msa0898890 | 0.821147 | 4.711612e-53 | -8.615850e-47 |
| Msa0758230 | Msa0901110 | 0.816574 | 5.155091e-52 | -8.615850e-47 |
| Msa0758230 | Msa0944610 | 0.801905 | 7.222418e-49 | -8.615850e-47 |
| Msa0758230 | Msa0945100 | 0.808906 | 2.459832e-50 | -8.615850e-47 |
| Msa0758230 | Msa0947530 | -0.813313 | 2.726890e-51 | -8.615850e-47 |
| Msa0758230 | Msa0994390 | 0.812181 | 4.823664e-51 | -8.615850e-47 |
| Msa0758230 | Msa1000930 | 0.833162 | 6.249561e-56 | -8.615850e-47 |
| Msa0758230 | Msa1002600 | -0.825341 | 4.942875e-54 | -8.615850e-47 |
| Msa0758230 | Msa1025260 | 0.814695 | 1.351441e-51 | -8.615850e-47 |
| Msa0758230 | Msa1038210 | -0.804169 | 2.458138e-49 | -8.615850e-47 |
| Msa0758230 | Msa1050700 | 0.817025 | 4.083337e-52 | -8.615850e-47 |
| Msa0758230 | Msa1071660 | 0.803783 | 2.956478e-49 | -8.615850e-47 |
| Msa0758230 | Msa1073400 | 0.800029 | 1.745330e-48 | -8.615850e-47 |
| Msa0758230 | Msa1073490 | 0.818480 | 1.917266e-52 | -8.615850e-47 |
| Msa0758230 | Msa1084500 | -0.804593 | 2.005239e-49 | -8.615850e-47 |
| Msa0758230 | Msa1093330 | 0.816218 | 6.194928e-52 | -8.615850e-47 |
| Msa0758230 | Msa1109350 | 0.807185 | 5.719022e-50 | -8.615850e-47 |
| Msa0758230 | Msa1114040 | 0.805788 | 1.127362e-49 | -8.615850e-47 |
| Msa0758230 | Msa1125790 | -0.805492 | 1.300375e-49 | -8.615850e-47 |
| Msa0758230 | Msa1135800 | -0.807877 | 4.077976e-50 | -8.615850e-47 |
| Msa0758230 | Msa1158770 | 0.811282 | 7.568545e-51 | -8.615850e-47 |
| Msa0758230 | Msa1164020 | 0.806837 | 6.774388e-50 | -8.615850e-47 |
| Msa0758230 | Msa1173900 | 0.836833 | 7.423473e-57 | -8.615850e-47 |
| Msa0758230 | Msa1178370 | 0.839652 | 1.394160e-57 | -8.615850e-47 |
| Msa0758230 | Msa1198880 | 0.814267 | 1.680853e-51 | -8.615850e-47 |
| Msa0758230 | Msa1205850 | 0.808209 | 3.465782e-50 | -8.615850e-47 |
| Msa0758230 | Msa1211830 | 0.817079 | 3.972330e-52 | -8.615850e-47 |
| Msa0758230 | Msa1223330 | 0.823999 | 1.023679e-53 | -8.615850e-47 |
| Msa0758230 | Msa1253810 | 0.821055 | 4.949297e-53 | -8.615850e-47 |
| Msa0758230 | Msa1294960 | 0.834441 | 2.992891e-56 | -8.615850e-47 |
| Msa0758230 | Msa1299700 | 0.801898 | 7.244158e-49 | -8.615850e-47 |
| Msa0758230 | Msa1323990 | 0.808369 | 3.203299e-50 | -8.615850e-47 |
| Msa0758230 | Msa1333970 | 0.814931 | 1.198000e-51 | -8.615850e-47 |
| Msa0758230 | Msa1355700 | 0.806614 | 7.550045e-50 | -8.615850e-47 |
| Msa0758230 | Msa1359270 | 0.815608 | 8.473444e-52 | -8.615850e-47 |
| Msa0758230 | Msa1363700 | 0.809684 | 1.675654e-50 | -8.615850e-47 |
| Msa0758230 | Msa1365860 | 0.802595 | 5.206000e-49 | -8.615850e-47 |
| Msa0758230 | Msa1381480 | 0.850408 | 1.731700e-60 | -8.615850e-47 |
| Msa0758230 | Msa1405220 | 0.800853 | 1.186137e-48 | -8.615850e-47 |
| Msa0758230 | Msa1422810 | 0.801344 | 9.414288e-49 | -8.615850e-47 |
| Msa0758230 | Msa1422910 | 0.815468 | 9.101665e-52 | -8.615850e-47 |
| Msa0758230 | Msa1449910 | 0.815975 | 7.017072e-52 | -8.615850e-47 |
| Msa0758230 | Msa1457160 | 0.806424 | 8.282157e-50 | -8.615850e-47 |
| Msa0758230 | Msa1465680 | 0.809745 | 1.625725e-50 | -8.615850e-47 |
| Msa0131450 | Msa0758230 | 0.805257 | 1.456448e-49 | -8.615850e-47 |
| Msa0139990 | Msa0758230 | 0.806220 | 9.141817e-50 | -8.615850e-47 |
| Msa0140400 | Msa0758230 | 0.821464 | 3.983061e-53 | -8.615850e-47 |
| Msa0140520 | Msa0758230 | -0.803982 | 2.687682e-49 | -8.615850e-47 |
| Msa0197530 | Msa0758230 | 0.808774 | 2.625726e-50 | -8.615850e-47 |
| Msa0207350 | Msa0758230 | 0.804475 | 2.121926e-49 | -8.615850e-47 |
| Msa0208810 | Msa0758230 | 0.801037 | 1.087709e-48 | -8.615850e-47 |
| Msa0365860 | Msa0758230 | 0.808737 | 2.673787e-50 | -8.615850e-47 |
| Msa0384880 | Msa0758230 | 0.808164 | 3.543732e-50 | -8.615850e-47 |
| Msa0436200 | Msa0758230 | 0.806217 | 9.156737e-50 | -8.615850e-47 |
| Msa0437510 | Msa0758230 | 0.813415 | 2.589966e-51 | -8.615850e-47 |
| Msa0239060 | Msa0758230 | 0.804191 | 2.431968e-49 | -8.615850e-47 |
| Msa0261360 | Msa0758230 | 0.803957 | 2.720227e-49 | -8.615850e-47 |
| Msa0340280 | Msa0758230 | 0.808066 | 3.718150e-50 | -8.615850e-47 |
| Msa0349700 | Msa0758230 | 0.809351 | 1.975418e-50 | -8.615850e-47 |
| Msa0517090 | Msa0758230 | 0.805725 | 1.162179e-49 | -8.615850e-47 |
| Msa0521670 | Msa0758230 | 0.820996 | 5.104831e-53 | -8.615850e-47 |
| Msa0524590 | Msa0758230 | 0.803895 | 2.801816e-49 | -8.615850e-47 |
| Msa0527910 | Msa0758230 | 0.819174 | 1.334099e-52 | -8.615850e-47 |
| Msa0550540 | Msa0758230 | 0.806289 | 8.843384e-50 | -8.615850e-47 |
| Msa0550570 | Msa0758230 | 0.814600 | 1.418387e-51 | -8.615850e-47 |
| Msa0576730 | Msa0758230 | 0.801803 | 7.578105e-49 | -8.615850e-47 |
| Msa0578090 | Msa0758230 | 0.801390 | 9.212252e-49 | -8.615850e-47 |
| Msa0586850 | Msa0758230 | 0.807829 | 4.175185e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0758230 | MtrunA17_Chr5g0405011 | 99.142 | 233 | 2 | 0 | 1 | 233 | 1 | 233 | 4.95e-171 | 470 |
| Msa0758230 | MtrunA17_Chr8g0372241 | 74.486 | 243 | 50 | 3 | 1 | 233 | 1 | 241 | 1.20e-121 | 345 |
| Msa0758230 | MtrunA17_Chr3g0145131 | 78.261 | 184 | 40 | 0 | 50 | 233 | 43 | 226 | 6.32e-103 | 297 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0758230 | AT2G16460.1 | 71.366 | 227 | 65 | 0 | 7 | 233 | 4 | 230 | 2.20e-110 | 317 |
| Msa0758230 | AT3G51090.1 | 65.339 | 251 | 69 | 2 | 1 | 233 | 48 | 298 | 1.94e-106 | 309 |
| Msa0758230 | AT3G51090.2 | 60.377 | 212 | 66 | 2 | 1 | 194 | 48 | 259 | 4.81e-78 | 236 |
| Msa0758230 | AT2G16460.2 | 64.881 | 168 | 59 | 0 | 7 | 174 | 4 | 171 | 2.88e-68 | 207 |
| Msa0758230 | AT2G35070.2 | 27.326 | 172 | 79 | 3 | 58 | 229 | 28 | 153 | 3.05e-12 | 63.2 |
| Msa0758230 | AT2G35070.1 | 27.326 | 172 | 79 | 3 | 58 | 229 | 28 | 153 | 3.05e-12 | 63.2 |
Find 94 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTATTGTATTCCCTTTC+AGG | 0.067323 | 5_2:-13400877 | Msa0758230:intron |
| TCAAATTGTTGGAGGAATTT+TGG | 0.076247 | 5_2:-13400727 | Msa0758230:five_prime_UTR |
| TTCAGGAAATCCACGCTTTA+AGG | 0.099975 | 5_2:-13396652 | Msa0758230:intron |
| ATTGCCTCAGCTTGCTTTAA+AGG | 0.139852 | 5_2:+13399941 | None:intergenic |
| GTACTTTATCACATCATATT+TGG | 0.179302 | 5_2:+13396613 | None:intergenic |
| CGAAATTGAAGGTGAAAATT+TGG | 0.217342 | 5_2:+13400578 | None:intergenic |
| TGGCCGCTGTGGCGGCTTGC+CGG | 0.234576 | 5_2:-13400671 | Msa0758230:CDS |
| TTTGAGATATGTAATGAATA+TGG | 0.237720 | 5_2:+13396362 | None:intergenic |
| GGAGATTAATTGAGATAAAA+TGG | 0.271668 | 5_2:+13400901 | None:intergenic |
| GAAGGGATTACGCGGTTTAT+TGG | 0.279296 | 5_2:+13400954 | None:intergenic |
| TTGAGATAAAATGGAGATTA+GGG | 0.279412 | 5_2:+13400910 | None:intergenic |
| CTCTATCAAGTTTGTTAGTC+AGG | 0.294634 | 5_2:+13396782 | None:intergenic |
| AATTCCGGGGTTGGTTTAAC+TGG | 0.298466 | 5_2:-13400627 | Msa0758230:CDS |
| GTGGCGGCTTGCCGGCGATT+GGG | 0.303722 | 5_2:-13400663 | Msa0758230:CDS |
| TTTGGGGTTGCAATAAAGTT+TGG | 0.315206 | 5_2:-13400709 | Msa0758230:five_prime_UTR |
| GATTAACACTGACAAAATTA+AGG | 0.320328 | 5_2:-13396512 | Msa0758230:three_prime_UTR |
| GGGAGATTGAGGACCAATTC+CGG | 0.327565 | 5_2:-13400642 | Msa0758230:CDS |
| ATTGAGATAAAATGGAGATT+AGG | 0.346510 | 5_2:+13400909 | None:intergenic |
| GGAGATTGAGGACCAATTCC+GGG | 0.359811 | 5_2:-13400641 | Msa0758230:CDS |
| AGTTAAACCAACCCCGGAAT+TGG | 0.368913 | 5_2:+13400629 | None:intergenic |
| TTGAGATATGTAATGAATAT+GGG | 0.381512 | 5_2:+13396363 | None:intergenic |
| GGTTTCCATTAGACTTCAAA+TGG | 0.386815 | 5_2:-13396404 | Msa0758230:three_prime_UTR |
| ACTGTAAGTGCAGGAGGATA+AGG | 0.391252 | 5_2:-13396840 | Msa0758230:intron |
| CTCCAACAATTTGAAATCAA+TGG | 0.392794 | 5_2:+13400736 | None:intergenic |
| AAGGCCCATTTGAAGTCTAA+TGG | 0.399026 | 5_2:+13396399 | None:intergenic |
| TGTGGCGGCTTGCCGGCGAT+TGG | 0.400407 | 5_2:-13400664 | Msa0758230:CDS |
| TTGTTGTTGTGTAGGTTAAG+AGG | 0.404187 | 5_2:-13399982 | Msa0758230:intron |
| GACCATTGATTTCAAATTGT+TGG | 0.405114 | 5_2:-13400738 | Msa0758230:five_prime_UTR |
| AAGCAAGCTGAGGCAATAAC+TGG | 0.420014 | 5_2:-13399935 | Msa0758230:CDS |
| ATGGAGATTAGGGAAGTAAA+TGG | 0.420150 | 5_2:+13400920 | None:intergenic |
| TCAAAGAAGATTACCTGAAA+GGG | 0.429725 | 5_2:+13400864 | None:intergenic |
| CCACGCTTTAAGGGCTCAGC+TGG | 0.431576 | 5_2:-13396642 | Msa0758230:CDS |
| TCAGGAAATCCACGCTTTAA+GGG | 0.443180 | 5_2:-13396651 | Msa0758230:intron |
| AGGAAACTAGAGAAGCTGTT+TGG | 0.457219 | 5_2:-13396486 | Msa0758230:three_prime_UTR |
| GTTAGTTTCAGCATTCTGAT+TGG | 0.457445 | 5_2:+13396807 | None:intergenic |
| TACCTGAAAGGGAATACAAT+AGG | 0.457810 | 5_2:+13400875 | None:intergenic |
| CTGTAAGTGCAGGAGGATAA+GGG | 0.466625 | 5_2:-13396839 | Msa0758230:intron |
| TGGCGGCTTGCCGGCGATTG+GGG | 0.472945 | 5_2:-13400662 | Msa0758230:CDS |
| ATCAAAGAAGATTACCTGAA+AGG | 0.490859 | 5_2:+13400863 | None:intergenic |
| TACATAGAACCCGAAATTGA+AGG | 0.491329 | 5_2:+13400567 | None:intergenic |
| CATTGATTTCAAATTGTTGG+AGG | 0.492052 | 5_2:-13400735 | Msa0758230:five_prime_UTR |
| AAACAATTGCATGGCAGTGC+TGG | 0.492277 | 5_2:-13396439 | Msa0758230:three_prime_UTR |
| GTGTAGGTTAAGAGGCTTGA+GGG | 0.492293 | 5_2:-13399974 | Msa0758230:intron |
| TTGAGGACCAATTCCGGGGT+TGG | 0.493555 | 5_2:-13400636 | Msa0758230:CDS |
| GCCGGCGATTGGGGAGATTG+AGG | 0.494997 | 5_2:-13400653 | Msa0758230:CDS |
| GTTGGATTTAAACCTTGAAA+GGG | 0.496533 | 5_2:-13396959 | Msa0758230:CDS |
| GGTTGGATTTAAACCTTGAA+AGG | 0.499726 | 5_2:-13396960 | Msa0758230:CDS |
| TAAGCTTCTCAGTTTCGTGT+TGG | 0.504715 | 5_2:+13397149 | None:intergenic |
| GAATCAAATGGCCGCTGTGG+CGG | 0.509153 | 5_2:-13400679 | Msa0758230:exon |
| CTTGTTTCAATATCTGCTGT+TGG | 0.511375 | 5_2:-13396578 | Msa0758230:CDS |
| GGAGAATGTATCTCGGTCAT+TGG | 0.516080 | 5_2:-13399882 | Msa0758230:CDS |
| GAGATAGATAAAGTCACGGC+TGG | 0.523910 | 5_2:-13396988 | Msa0758230:CDS |
| AAAGCGTGTCATAATCGTAA+TGG | 0.527917 | 5_2:-13401220 | None:intergenic |
| TCCTCAATCTCCCCAATCGC+CGG | 0.535142 | 5_2:+13400652 | None:intergenic |
| CTGAAAGGGAATACAATAGG+AGG | 0.538638 | 5_2:+13400878 | None:intergenic |
| TCGCCGGCAAGCCGCCACAG+CGG | 0.543052 | 5_2:+13400668 | None:intergenic |
| CAGTGCTGGTGGAGCTGAAG+TGG | 0.543924 | 5_2:-13396425 | Msa0758230:three_prime_UTR |
| TGAGGTGTTGAATGATAGCT+TGG | 0.550034 | 5_2:-13399903 | Msa0758230:CDS |
| CGTGTTGGAGCAGAGAAAAG+TGG | 0.557662 | 5_2:+13397164 | None:intergenic |
| CAATTGCATGGCAGTGCTGG+TGG | 0.559379 | 5_2:-13396436 | Msa0758230:three_prime_UTR |
| AGTCACGGCTGGACAGCGGT+TGG | 0.560017 | 5_2:-13396977 | Msa0758230:CDS |
| GTTTCCATTAGACTTCAAAT+GGG | 0.563495 | 5_2:-13396403 | Msa0758230:three_prime_UTR |
| AGAAGATGCGTAGTGAATTG+AGG | 0.566616 | 5_2:-13397114 | Msa0758230:intron |
| TGAAAGGGAATACAATAGGA+GGG | 0.569950 | 5_2:+13400879 | None:intergenic |
| AGCAAGGCAAGTAAATGAGT+TGG | 0.574372 | 5_2:+13396305 | None:intergenic |
| GAGATTAGGGAAGTAAATGG+TGG | 0.574726 | 5_2:+13400923 | None:intergenic |
| TTACATCAATATACGAAGAA+CGG | 0.580904 | 5_2:+13396550 | None:intergenic |
| CACTGACAAAATTAAGGTGA+AGG | 0.581609 | 5_2:-13396506 | Msa0758230:three_prime_UTR |
| TAAATGGTGGGAATTAGAGA+AGG | 0.583808 | 5_2:+13400936 | None:intergenic |
| GTTAAGAGGCTTGAGGGACA+AGG | 0.590914 | 5_2:-13399968 | Msa0758230:CDS |
| TTGGAATCAAATGGCCGCTG+TGG | 0.593151 | 5_2:-13400682 | Msa0758230:exon |
| CCAGCTGAGCCCTTAAAGCG+TGG | 0.594471 | 5_2:+13396642 | None:intergenic |
| AGATTAGGGAAGTAAATGGT+GGG | 0.606475 | 5_2:+13400924 | None:intergenic |
| TTGGATTTAAACCTTGAAAG+GGG | 0.608817 | 5_2:-13396958 | Msa0758230:CDS |
| GATGTGATAAAGTACTGCAT+AGG | 0.611784 | 5_2:-13396605 | Msa0758230:CDS |
| AAATGGTGGGAATTAGAGAA+GGG | 0.613882 | 5_2:+13400937 | None:intergenic |
| AACAGAAGTGCAGAGCTCAC+AGG | 0.617774 | 5_2:-13399623 | Msa0758230:intron |
| TGGATTTAAACCTTGAAAGG+GGG | 0.618514 | 5_2:-13396957 | Msa0758230:intron |
| GAGATTGAGGACCAATTCCG+GGG | 0.623639 | 5_2:-13400640 | Msa0758230:CDS |
| TTGGTAAATCAAATGGACAA+CGG | 0.627930 | 5_2:-13400533 | Msa0758230:CDS |
| ATAGCTTGGAGAATGTATCT+CGG | 0.632775 | 5_2:-13399889 | Msa0758230:CDS |
| GAAAGGGAATACAATAGGAG+GGG | 0.636306 | 5_2:+13400880 | None:intergenic |
| AATAACTGGTGCTATAACTG+AGG | 0.638529 | 5_2:-13399921 | Msa0758230:CDS |
| CTGTAAGAGAAACAATTGCA+TGG | 0.642151 | 5_2:-13396448 | Msa0758230:three_prime_UTR |
| ATCAAAAGAAGAAATGCAGA+GGG | 0.642450 | 5_2:-13399858 | Msa0758230:intron |
| TATCAAAAGAAGAAATGCAG+AGG | 0.651897 | 5_2:-13399859 | Msa0758230:CDS |
| AGTACTCACAAGCAACAGCA+AGG | 0.652229 | 5_2:+13396289 | None:intergenic |
| AAAACCAGTTAAACCAACCC+CGG | 0.659053 | 5_2:+13400623 | None:intergenic |
| TGTGTAGGTTAAGAGGCTTG+AGG | 0.667242 | 5_2:-13399975 | Msa0758230:intron |
| ATAAAGTCACGGCTGGACAG+CGG | 0.681023 | 5_2:-13396981 | Msa0758230:CDS |
| AGTGCCTTTAAAGCAAGCTG+AGG | 0.684635 | 5_2:-13399945 | Msa0758230:CDS |
| GTATGAGATAGATAAAGTCA+CGG | 0.685262 | 5_2:-13396992 | Msa0758230:CDS |
| GAATTAGAGAAGGGATTACG+CGG | 0.689559 | 5_2:+13400946 | None:intergenic |
| TCAATATACGAAGAACGGCG+AGG | 0.726236 | 5_2:+13396555 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAATATCTATATTGAT+AGG | + | chr5_2:13396651-13396670 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTAATTACAC+AGG | - | chr5_2:13401154-13401173 | Msa0758230:intron | 10.0% |
| !!! | TCATTTTTGATTCAAAAAAT+AGG | - | chr5_2:13396492-13396511 | Msa0758230:three_prime_UTR | 15.0% |
| !!! | TTTTAAAATTAAAACCAAAC+CGG | + | chr5_2:13397215-13397234 | None:intergenic | 15.0% |
| !!! | AATTAAAATCTGCATTTTTT+TGG | - | chr5_2:13397350-13397369 | Msa0758230:intron | 15.0% |
| !! | ATTGTAAATAAGTTTCAAAA+GGG | + | chr5_2:13397658-13397677 | None:intergenic | 15.0% |
| !! | AATTGTAAATAAGTTTCAAA+AGG | + | chr5_2:13397659-13397678 | None:intergenic | 15.0% |
| !!! | ATGTAATAATGTTTTTTTGA+AGG | - | chr5_2:13397753-13397772 | Msa0758230:intron | 15.0% |
| !!! | ATATGGTAATGAAATTTTAA+AGG | - | chr5_2:13397947-13397966 | Msa0758230:intron | 15.0% |
| !! | GTATTATAACAATATATAAC+TGG | + | chr5_2:13399818-13399837 | None:intergenic | 15.0% |
| !! | TATATTCTCTTAAATAAGTT+TGG | - | chr5_2:13400101-13400120 | Msa0758230:intron | 15.0% |
| !! | TAATGAAAATATTATAATGC+AGG | - | chr5_2:13400294-13400313 | Msa0758230:intron | 15.0% |
| !! | AATGAAAATATTATAATGCA+GGG | - | chr5_2:13400295-13400314 | Msa0758230:intron | 15.0% |
| !! | TTAATATTAATACAATGTTC+AGG | - | chr5_2:13400816-13400835 | Msa0758230:intron | 15.0% |
| !!! | AAATTTTAAAGGTTGAATGA+AGG | - | chr5_2:13397958-13397977 | Msa0758230:intron | 20.0% |
| !!! | AATTTTAAAGGTTGAATGAA+GGG | - | chr5_2:13397959-13397978 | Msa0758230:intron | 20.0% |
| !!! | TTTGGTTATATTTTTCTGAT+TGG | + | chr5_2:13398207-13398226 | None:intergenic | 20.0% |
| !!! | ATGCTATTTTTAAAATCTTC+TGG | + | chr5_2:13398626-13398645 | None:intergenic | 20.0% |
| !!! | GATTTTCAAAAACACATAAA+CGG | - | chr5_2:13398676-13398695 | Msa0758230:intron | 20.0% |
| !! | AACATTCTAATTCTATTGTT+TGG | - | chr5_2:13399187-13399206 | Msa0758230:intron | 20.0% |
| !! | AAGTGTCAATATTAAAAGTA+GGG | + | chr5_2:13399287-13399306 | None:intergenic | 20.0% |
| !!! | AAAGTGTCAATATTAAAAGT+AGG | + | chr5_2:13399288-13399307 | None:intergenic | 20.0% |
| !! | TGTTAATATTTGTCCTTTAT+CGG | - | chr5_2:13399556-13399575 | Msa0758230:intron | 20.0% |
| !! | AAAAAAAAAGGAAGAAAGAA+TGG | - | chr5_2:13399676-13399695 | Msa0758230:intron | 20.0% |
| !! | TAACAATATATAACTGGATT+TGG | + | chr5_2:13399812-13399831 | None:intergenic | 20.0% |
| !!! | TTTTCAGGTAATAAACTTTA+TGG | - | chr5_2:13400445-13400464 | Msa0758230:intron | 20.0% |
| !! | TCAAACATTAACAATCATAA+TGG | + | chr5_2:13400626-13400645 | None:intergenic | 20.0% |
| !! | TAAAGAAAATCAAAATGACT+AGG | + | chr5_2:13400799-13400818 | None:intergenic | 20.0% |
| !! | TTGAGATATGTAATGAATAT+GGG | + | chr5_2:13401125-13401144 | None:intergenic | 20.0% |
| !!! | TTTGAGATATGTAATGAATA+TGG | + | chr5_2:13401126-13401145 | None:intergenic | 20.0% |
| !!! | AACCACTTTTTAACAACTTT+TGG | - | chr5_2:13396324-13396343 | Msa0758230:three_prime_UTR | 25.0% |
| ! | TCAACAAAGTTGTCATTAAA+TGG | - | chr5_2:13396431-13396450 | Msa0758230:three_prime_UTR | 25.0% |
| ! | TTGAGATAAAATGGAGATTA+GGG | + | chr5_2:13396578-13396597 | None:intergenic | 25.0% |
| ! | ATTGAGATAAAATGGAGATT+AGG | + | chr5_2:13396579-13396598 | None:intergenic | 25.0% |
| ! | GGAGATTAATTGAGATAAAA+TGG | + | chr5_2:13396587-13396606 | None:intergenic | 25.0% |
| !!! | TGCAATAAAGTTTGGTTTTT+TGG | - | chr5_2:13396784-13396803 | Msa0758230:CDS | 25.0% |
| !!! | TTTGGTTTTTTGGAATCAAA+TGG | - | chr5_2:13396794-13396813 | Msa0758230:CDS | 25.0% |
| !! | CAAATTTTCACCTTCAATTT+CGG | - | chr5_2:13396908-13396927 | Msa0758230:intron | 25.0% |
| !! | AAATTTTCACCTTCAATTTC+GGG | - | chr5_2:13396909-13396928 | Msa0758230:intron | 25.0% |
| !!! | TCTATGTATTTTTCTGGTTT+TGG | - | chr5_2:13396933-13396952 | Msa0758230:intron | 25.0% |
| ! | AGAGAAAATGTGAATTACAA+GGG | + | chr5_2:13397000-13397019 | None:intergenic | 25.0% |
| ! | AAGAGAAAATGTGAATTACA+AGG | + | chr5_2:13397001-13397020 | None:intergenic | 25.0% |
| ! | TTTCTTCATAACTATTCCAA+GGG | + | chr5_2:13397464-13397483 | None:intergenic | 25.0% |
| ! | TGAAACTTATTTACAATTCC+AGG | - | chr5_2:13397661-13397680 | Msa0758230:intron | 25.0% |
| !! | TTACATAACTTTTTGCATCA+CGG | + | chr5_2:13397739-13397758 | None:intergenic | 25.0% |
| ! | TGCAAAAATAGTGTTATATG+TGG | - | chr5_2:13397896-13397915 | Msa0758230:intron | 25.0% |
| ! | TAATTGCAGGAAAAAAATCA+AGG | + | chr5_2:13398346-13398365 | None:intergenic | 25.0% |
| ! | GGCATATATTTATCCAAATA+TGG | - | chr5_2:13398427-13398446 | Msa0758230:intron | 25.0% |
| !!! | ATTTCTTGCTGTTTGAATTT+AGG | + | chr5_2:13398579-13398598 | None:intergenic | 25.0% |
| !! | GTAACAGAAATTTAGAACTA+TGG | + | chr5_2:13398971-13398990 | None:intergenic | 25.0% |
| !!! | ACAAAGTTAAAATTTTCGAG+CGG | - | chr5_2:13399237-13399256 | Msa0758230:intron | 25.0% |
| ! | CAATATTAAAAGTAGGGAAA+AGG | + | chr5_2:13399281-13399300 | None:intergenic | 25.0% |
| ! | CAGTTGTACAATAAAAGAAA+GGG | + | chr5_2:13399337-13399356 | None:intergenic | 25.0% |
| ! | GTATGATAAGAAATGGAAAA+AGG | - | chr5_2:13399515-13399534 | Msa0758230:intron | 25.0% |
| !! | ATATGAAATTCTAAAGACCA+GGG | + | chr5_2:13399591-13399610 | None:intergenic | 25.0% |
| ! | AAATTAGTAAAGCTCTGTTT+GGG | - | chr5_2:13399621-13399640 | Msa0758230:intron | 25.0% |
| ! | ATACAAAATCCTCCTAATTT+GGG | - | chr5_2:13399735-13399754 | Msa0758230:intron | 25.0% |
| ! | TAAAAAATTGTATTGGACGA+GGG | - | chr5_2:13399763-13399782 | Msa0758230:intron | 25.0% |
| ! | TTTGTTCTTGAAATTATCTG+TGG | - | chr5_2:13400045-13400064 | Msa0758230:intron | 25.0% |
| ! | TTCTCTTAAATAAGTTTGGT+TGG | - | chr5_2:13400105-13400124 | Msa0758230:intron | 25.0% |
| !! | TAAATAAGTTTGGTTGGTAT+TGG | - | chr5_2:13400111-13400130 | Msa0758230:intron | 25.0% |
| !! | TTTTCATTATATGACCACAT+CGG | + | chr5_2:13400283-13400302 | None:intergenic | 25.0% |
| !!! | ATGAAACTAGTAGTTGATAA+AGG | + | chr5_2:13400425-13400444 | None:intergenic | 25.0% |
| !!! | AACTACTAGTTTCATTTTTC+AGG | - | chr5_2:13400430-13400449 | Msa0758230:intron | 25.0% |
| ! | GTACTTTATCACATCATATT+TGG | + | chr5_2:13400875-13400894 | None:intergenic | 25.0% |
| ! | TTACATCAATATACGAAGAA+CGG | + | chr5_2:13400938-13400957 | None:intergenic | 25.0% |
| ! | GATTAACACTGACAAAATTA+AGG | - | chr5_2:13400973-13400992 | Msa0758230:five_prime_UTR | 25.0% |
| ! | TATGGGCTTGAAAAAAAAAA+AGG | + | chr5_2:13401108-13401127 | None:intergenic | 25.0% |
| GTCCAAAAGTTGTTAAAAAG+TGG | + | chr5_2:13396329-13396348 | None:intergenic | 30.0% | |
| !! | TTGGTTTTCTCACTTCTTAT+TGG | + | chr5_2:13396406-13396425 | None:intergenic | 30.0% |
| AATAAGAAGTGAGAAAACCA+AGG | - | chr5_2:13396405-13396424 | Msa0758230:three_prime_UTR | 30.0% | |
| TCAAAGAAGATTACCTGAAA+GGG | + | chr5_2:13396624-13396643 | None:intergenic | 30.0% | |
| ATCAAAGAAGATTACCTGAA+AGG | + | chr5_2:13396625-13396644 | None:intergenic | 30.0% | |
| !! | GACCATTGATTTCAAATTGT+TGG | - | chr5_2:13396747-13396766 | Msa0758230:intron | 30.0% |
| ! | CTCCAACAATTTGAAATCAA+TGG | + | chr5_2:13396752-13396771 | None:intergenic | 30.0% |
| !! | CATTGATTTCAAATTGTTGG+AGG | - | chr5_2:13396750-13396769 | Msa0758230:intron | 30.0% |
| ! | TCAAATTGTTGGAGGAATTT+TGG | - | chr5_2:13396758-13396777 | Msa0758230:intron | 30.0% |
| ! | CAAATTGTTGGAGGAATTTT+GGG | - | chr5_2:13396759-13396778 | Msa0758230:intron | 30.0% |
| ! | AAATTGTTGGAGGAATTTTG+GGG | - | chr5_2:13396760-13396779 | Msa0758230:intron | 30.0% |
| CGAAATTGAAGGTGAAAATT+TGG | + | chr5_2:13396910-13396929 | None:intergenic | 30.0% | |
| !!! | TCTGGTTTTGGTAAATCAAA+TGG | - | chr5_2:13396945-13396964 | Msa0758230:intron | 30.0% |
| TTGGTAAATCAAATGGACAA+CGG | - | chr5_2:13396952-13396971 | Msa0758230:intron | 30.0% | |
| CGGTTGAATTGTTAAAACAT+TGG | + | chr5_2:13397071-13397090 | None:intergenic | 30.0% | |
| TTACTTTAGCAGTTTGACTA+CGG | + | chr5_2:13397146-13397165 | None:intergenic | 30.0% | |
| TAATCTTAAACAAACAGCCA+CGG | + | chr5_2:13397294-13397313 | None:intergenic | 30.0% | |
| AGATGATCCATATTCAAACT+CGG | - | chr5_2:13397313-13397332 | Msa0758230:intron | 30.0% | |
| ATCCAAATTCTTTATTCCCT+TGG | - | chr5_2:13397445-13397464 | Msa0758230:intron | 30.0% | |
| TTCCAAGGGAATAAAGAATT+TGG | + | chr5_2:13397450-13397469 | None:intergenic | 30.0% | |
| CTTTCTTCATAACTATTCCA+AGG | + | chr5_2:13397465-13397484 | None:intergenic | 30.0% | |
| CTTGGAATAGTTATGAAGAA+AGG | - | chr5_2:13397463-13397482 | Msa0758230:intron | 30.0% | |
| TTAACCTACACAACAACAAA+GGG | + | chr5_2:13397502-13397521 | None:intergenic | 30.0% | |
| TATCAAAAGAAGAAATGCAG+AGG | - | chr5_2:13397626-13397645 | Msa0758230:intron | 30.0% | |
| ATCAAAAGAAGAAATGCAGA+GGG | - | chr5_2:13397627-13397646 | Msa0758230:intron | 30.0% | |
| TATTTACAATTCCAGGAATG+TGG | - | chr5_2:13397668-13397687 | Msa0758230:intron | 30.0% | |
| ATTTACAATTCCAGGAATGT+GGG | - | chr5_2:13397669-13397688 | Msa0758230:intron | 30.0% | |
| !! | TGTACTAATGTTAGCTCTTT+TGG | - | chr5_2:13397782-13397801 | Msa0758230:intron | 30.0% |
| TTCTATTTCCTTGTGTTCTT+AGG | + | chr5_2:13398167-13398186 | None:intergenic | 30.0% | |
| !! | GCAAGATATTTTTGCCATTT+TGG | + | chr5_2:13398254-13398273 | None:intergenic | 30.0% |
| ! | TTGCTGAGGAAAATTTTTGT+AGG | + | chr5_2:13398276-13398295 | None:intergenic | 30.0% |
| ! | GGAGATCTTTTTATTGCATT+TGG | + | chr5_2:13398325-13398344 | None:intergenic | 30.0% |
| !! | TCTGATTTGGAATTGTACTT+GGG | + | chr5_2:13398377-13398396 | None:intergenic | 30.0% |
| ATAGAATGAAAATCCAAGCT+AGG | - | chr5_2:13398406-13398425 | Msa0758230:intron | 30.0% | |
| TATCCAAATATGGTGAGATA+CGG | - | chr5_2:13398437-13398456 | Msa0758230:intron | 30.0% | |
| AAAAGGACTTTGGATTTCAA+AGG | + | chr5_2:13398731-13398750 | None:intergenic | 30.0% | |
| ! | CAGAAATTTAGAACTATGGT+TGG | + | chr5_2:13398967-13398986 | None:intergenic | 30.0% |
| CTAAATTTCTGTTACAGCTA+AGG | - | chr5_2:13398976-13398995 | Msa0758230:intron | 30.0% | |
| TTACATGTACATCTACTTGT+TGG | - | chr5_2:13399066-13399085 | Msa0758230:intron | 30.0% | |
| AATGACAAAGAATGTCTACT+TGG | + | chr5_2:13399150-13399169 | None:intergenic | 30.0% | |
| TGTACAATAAAAGAAAGGGA+AGG | + | chr5_2:13399333-13399352 | None:intergenic | 30.0% | |
| GCAGTTGTACAATAAAAGAA+AGG | + | chr5_2:13399338-13399357 | None:intergenic | 30.0% | |
| TAAGTGACACCAATATCAAA+AGG | + | chr5_2:13399419-13399438 | None:intergenic | 30.0% | |
| CCATTTCTTATCATACAATC+TGG | + | chr5_2:13399511-13399530 | None:intergenic | 30.0% | |
| CCAGATTGTATGATAAGAAA+TGG | - | chr5_2:13399508-13399527 | Msa0758230:intron | 30.0% | |
| ATATTTGTCCTTTATCGGAA+TGG | - | chr5_2:13399561-13399580 | Msa0758230:intron | 30.0% | |
| ! | CATATGAAATTCTAAAGACC+AGG | + | chr5_2:13399592-13399611 | None:intergenic | 30.0% |
| GAAATTAGTAAAGCTCTGTT+TGG | - | chr5_2:13399620-13399639 | Msa0758230:intron | 30.0% | |
| GGAGAGCTTGAAAAAAAAAA+AGG | - | chr5_2:13399664-13399683 | Msa0758230:CDS | 30.0% | |
| GATACAAAATCCTCCTAATT+TGG | - | chr5_2:13399734-13399753 | Msa0758230:intron | 30.0% | |
| TACAAAATCCTCCTAATTTG+GGG | - | chr5_2:13399736-13399755 | Msa0758230:intron | 30.0% | |
| !!! | TTTTTTAGTTCCCCCAAATT+AGG | + | chr5_2:13399750-13399769 | None:intergenic | 30.0% |
| GGGGAACTAAAAAATTGTAT+TGG | - | chr5_2:13399756-13399775 | Msa0758230:intron | 30.0% | |
| CTAAAAAATTGTATTGGACG+AGG | - | chr5_2:13399762-13399781 | Msa0758230:intron | 30.0% | |
| !!! | ACACTCGCAATTTTTTTTGA+AGG | - | chr5_2:13399895-13399914 | Msa0758230:CDS | 30.0% |
| ! | ATATACGTATTTTCCATCAC+AGG | + | chr5_2:13400084-13400103 | None:intergenic | 30.0% |
| ! | AAGATTTAGGACATTATGCA+GGG | - | chr5_2:13400138-13400157 | Msa0758230:intron | 30.0% |
| TTATAAGGACAAGGAAAACA+AGG | + | chr5_2:13400216-13400235 | None:intergenic | 30.0% | |
| TTGTCCTTATAATGTTTCCT+CGG | - | chr5_2:13400224-13400243 | Msa0758230:intron | 30.0% | |
| TTTCATTATATGACCACATC+GGG | + | chr5_2:13400282-13400301 | None:intergenic | 30.0% | |
| GTATGAGATAGATAAAGTCA+CGG | - | chr5_2:13400493-13400512 | Msa0758230:intron | 30.0% | |
| GTTGGATTTAAACCTTGAAA+GGG | - | chr5_2:13400526-13400545 | Msa0758230:CDS | 30.0% | |
| TTGGATTTAAACCTTGAAAG+GGG | - | chr5_2:13400527-13400546 | Msa0758230:CDS | 30.0% | |
| GTTTCCATTAGACTTCAAAT+GGG | - | chr5_2:13401082-13401101 | Msa0758230:intron | 30.0% | |
| TGGTCAAAAACAATAGAGAG+AGG | + | chr5_2:13396386-13396405 | None:intergenic | 35.0% | |
| ! | AAATGGTGGGAATTAGAGAA+GGG | + | chr5_2:13396551-13396570 | None:intergenic | 35.0% |
| ! | TAAATGGTGGGAATTAGAGA+AGG | + | chr5_2:13396552-13396571 | None:intergenic | 35.0% |
| AGATTAGGGAAGTAAATGGT+GGG | + | chr5_2:13396564-13396583 | None:intergenic | 35.0% | |
| ATGGAGATTAGGGAAGTAAA+TGG | + | chr5_2:13396568-13396587 | None:intergenic | 35.0% | |
| TGAAAGGGAATACAATAGGA+GGG | + | chr5_2:13396609-13396628 | None:intergenic | 35.0% | |
| TACCTGAAAGGGAATACAAT+AGG | + | chr5_2:13396613-13396632 | None:intergenic | 35.0% | |
| ! | TTTGGGGTTGCAATAAAGTT+TGG | - | chr5_2:13396776-13396795 | Msa0758230:intron | 35.0% |
| TACATAGAACCCGAAATTGA+AGG | + | chr5_2:13396921-13396940 | None:intergenic | 35.0% | |
| ! | TCGGGTTCTATGTATTTTTC+TGG | - | chr5_2:13396927-13396946 | Msa0758230:intron | 35.0% |
| TGAAATTGAATATGACCCAG+AGG | + | chr5_2:13397112-13397131 | None:intergenic | 35.0% | |
| CTGCTAAAGTAAATGAACTG+TGG | - | chr5_2:13397154-13397173 | Msa0758230:CDS | 35.0% | |
| AGACATGTTCAAGGTTTAAC+CGG | - | chr5_2:13397180-13397199 | Msa0758230:intron | 35.0% | |
| ! | AAACACTGCCATTTCATTTG+TGG | - | chr5_2:13397233-13397252 | Msa0758230:intron | 35.0% |
| CAAAATGCCGAGTTTGAATA+TGG | + | chr5_2:13397323-13397342 | None:intergenic | 35.0% | |
| CTTAACCTACACAACAACAA+AGG | + | chr5_2:13397503-13397522 | None:intergenic | 35.0% | |
| ! | TTGTTGTTGTGTAGGTTAAG+AGG | - | chr5_2:13397503-13397522 | Msa0758230:intron | 35.0% |
| !! | AATAACTGGTGCTATAACTG+AGG | - | chr5_2:13397564-13397583 | Msa0758230:intron | 35.0% |
| ATAGCTTGGAGAATGTATCT+CGG | - | chr5_2:13397596-13397615 | Msa0758230:intron | 35.0% | |
| !! | TGTTTTGAATTTGGACAGGT+TGG | + | chr5_2:13397846-13397865 | None:intergenic | 35.0% |
| !! | CTTCTGTTTTGAATTTGGAC+AGG | + | chr5_2:13397850-13397869 | None:intergenic | 35.0% |
| !! | CTGCACTTCTGTTTTGAATT+TGG | + | chr5_2:13397855-13397874 | None:intergenic | 35.0% |
| ! | TATGTGGACTTTGATGACTT+AGG | - | chr5_2:13397912-13397931 | Msa0758230:intron | 35.0% |
| TTAGGTGCATGTGTATGATA+TGG | - | chr5_2:13397930-13397949 | Msa0758230:intron | 35.0% | |
| TGCTTTAGTGTTGTAGACAT+AGG | - | chr5_2:13398021-13398040 | Msa0758230:intron | 35.0% | |
| GGACTTGTATTGTAAAAGGT+TGG | + | chr5_2:13398140-13398159 | None:intergenic | 35.0% | |
| TGCTGGACTTGTATTGTAAA+AGG | + | chr5_2:13398144-13398163 | None:intergenic | 35.0% | |
| CACAAGGAAATAGAAGAGAT+TGG | - | chr5_2:13398172-13398191 | Msa0758230:intron | 35.0% | |
| ! | TCAAAGTCGAAATGTGGTTT+TGG | + | chr5_2:13398225-13398244 | None:intergenic | 35.0% |
| ACTTGATCAAAGTCGAAATG+TGG | + | chr5_2:13398231-13398250 | None:intergenic | 35.0% | |
| GACTTTGATCAAGTCCAAAA+TGG | - | chr5_2:13398237-13398256 | Msa0758230:intron | 35.0% | |
| !! | CTCTGATTTGGAATTGTACT+TGG | + | chr5_2:13398378-13398397 | None:intergenic | 35.0% |
| CAAGTACAATTCCAAATCAG+AGG | - | chr5_2:13398376-13398395 | Msa0758230:intron | 35.0% | |
| TACAATTCCAAATCAGAGGA+AGG | - | chr5_2:13398380-13398399 | Msa0758230:intron | 35.0% | |
| GGATAAATATATGCCTAGCT+TGG | + | chr5_2:13398422-13398441 | None:intergenic | 35.0% | |
| ! | TTATTCCTCTGAAGGTGAAA+AGG | + | chr5_2:13398748-13398767 | None:intergenic | 35.0% |
| !! | TATTGTGTTGGTCTTGAAGA+TGG | + | chr5_2:13398836-13398855 | None:intergenic | 35.0% |
| GTTCCAACTATCTGAAGATA+AGG | + | chr5_2:13398898-13398917 | None:intergenic | 35.0% | |
| AGAACTATGGTTGGATACTA+TGG | + | chr5_2:13398958-13398977 | None:intergenic | 35.0% | |
| AGCTAAGGAAAACCAAAGAA+AGG | - | chr5_2:13398991-13399010 | Msa0758230:intron | 35.0% | |
| GCTAAGGAAAACCAAAGAAA+GGG | - | chr5_2:13398992-13399011 | Msa0758230:intron | 35.0% | |
| CTAAGGAAAACCAAAGAAAG+GGG | - | chr5_2:13398993-13399012 | Msa0758230:intron | 35.0% | |
| !!! | TTTTTTGTGTCCCCTTTCTT+TGG | + | chr5_2:13399006-13399025 | None:intergenic | 35.0% |
| TAGATCTTTCTACCAACTTG+AGG | - | chr5_2:13399038-13399057 | Msa0758230:intron | 35.0% | |
| TTGTTGGTATGCTACACATT+AGG | - | chr5_2:13399082-13399101 | Msa0758230:intron | 35.0% | |
| TGCGTAGTAAAAACATGAGA+AGG | + | chr5_2:13399123-13399142 | None:intergenic | 35.0% | |
| !! | ATATCAAAAGGCATCAATCG+AGG | + | chr5_2:13399407-13399426 | None:intergenic | 35.0% |
| ! | CGATTGATGCCTTTTGATAT+TGG | - | chr5_2:13399407-13399426 | Msa0758230:intron | 35.0% |
| !! | TGGTGTCACTTATGCATATA+AGG | - | chr5_2:13399427-13399446 | Msa0758230:intron | 35.0% |
| AAGAAAGAATGGAGAGCTTT+GGG | - | chr5_2:13399687-13399706 | Msa0758230:intron | 35.0% | |
| ACAAAATCCTCCTAATTTGG+GGG | - | chr5_2:13399737-13399756 | Msa0758230:intron | 35.0% | |
| GACTTGTGATCTTCAAACTA+AGG | - | chr5_2:13400018-13400037 | Msa0758230:intron | 35.0% | |
| TTATTGAAGCAATCCTGTGA+TGG | - | chr5_2:13400068-13400087 | Msa0758230:intron | 35.0% | |
| !! | TGGTATTGGTTGCAAGATTT+AGG | - | chr5_2:13400125-13400144 | Msa0758230:intron | 35.0% |
| ! | CAAGATTTAGGACATTATGC+AGG | - | chr5_2:13400137-13400156 | Msa0758230:intron | 35.0% |
| AAGTAACTTCAGCAGAAAGA+TGG | + | chr5_2:13400166-13400185 | None:intergenic | 35.0% | |
| GAGGAAACATTATAAGGACA+AGG | + | chr5_2:13400225-13400244 | None:intergenic | 35.0% | |
| AAGGAAAGTCGATGAAATCA+AGG | + | chr5_2:13400406-13400425 | None:intergenic | 35.0% | |
| AACTTTATGGTGCATTGTTC+TGG | - | chr5_2:13400458-13400477 | Msa0758230:intron | 35.0% | |
| ACTTTATGGTGCATTGTTCT+GGG | - | chr5_2:13400459-13400478 | Msa0758230:intron | 35.0% | |
| GGTTGGATTTAAACCTTGAA+AGG | - | chr5_2:13400525-13400544 | Msa0758230:CDS | 35.0% | |
| TGGATTTAAACCTTGAAAGG+GGG | - | chr5_2:13400528-13400547 | Msa0758230:CDS | 35.0% | |
| TTCAGTAATGCTCAGACAAT+TGG | + | chr5_2:13400574-13400593 | None:intergenic | 35.0% | |
| TAATGTTTGACTGTAAGTGC+AGG | - | chr5_2:13400636-13400655 | Msa0758230:CDS | 35.0% | |
| ! | GTTAGTTTCAGCATTCTGAT+TGG | + | chr5_2:13400681-13400700 | None:intergenic | 35.0% |
| !! | CTCTATCAAGTTTGTTAGTC+AGG | + | chr5_2:13400706-13400725 | None:intergenic | 35.0% |
| !! | GATGTGATAAAGTACTGCAT+AGG | - | chr5_2:13400880-13400899 | Msa0758230:five_prime_UTR | 35.0% |
| CTTGTTTCAATATCTGCTGT+TGG | - | chr5_2:13400907-13400926 | Msa0758230:five_prime_UTR | 35.0% | |
| CACTGACAAAATTAAGGTGA+AGG | - | chr5_2:13400979-13400998 | Msa0758230:five_prime_UTR | 35.0% | |
| CTGTAAGAGAAACAATTGCA+TGG | - | chr5_2:13401037-13401056 | Msa0758230:intron | 35.0% | |
| GGTTTCCATTAGACTTCAAA+TGG | - | chr5_2:13401081-13401100 | Msa0758230:intron | 35.0% | |
| GACAACTTTGTTGACAACCT+TGG | + | chr5_2:13396425-13396444 | None:intergenic | 40.0% | |
| GAATTAGAGAAGGGATTACG+CGG | + | chr5_2:13396542-13396561 | None:intergenic | 40.0% | |
| GAGATTAGGGAAGTAAATGG+TGG | + | chr5_2:13396565-13396584 | None:intergenic | 40.0% | |
| GAAAGGGAATACAATAGGAG+GGG | + | chr5_2:13396608-13396627 | None:intergenic | 40.0% | |
| CTGAAAGGGAATACAATAGG+AGG | + | chr5_2:13396610-13396629 | None:intergenic | 40.0% | |
| CTCCTATTGTATTCCCTTTC+AGG | - | chr5_2:13396608-13396627 | Msa0758230:CDS | 40.0% | |
| AAAACCAGTTAAACCAACCC+CGG | + | chr5_2:13396865-13396884 | None:intergenic | 40.0% | |
| !!! | GTTGGTTTAACTGGTTTTGC+TGG | - | chr5_2:13396867-13396886 | Msa0758230:intron | 40.0% |
| !!! | TTAACTGGTTTTGCTGGCTA+TGG | - | chr5_2:13396873-13396892 | Msa0758230:intron | 40.0% |
| AGTTTGACTACGGTTTAAGG+CGG | + | chr5_2:13397136-13397155 | None:intergenic | 40.0% | |
| AGCAGTTTGACTACGGTTTA+AGG | + | chr5_2:13397139-13397158 | None:intergenic | 40.0% | |
| CTGTGGTAAAGACATGTTCA+AGG | - | chr5_2:13397171-13397190 | Msa0758230:CDS | 40.0% | |
| TCATCCGATCTTTGACCAAA+AGG | - | chr5_2:13397374-13397393 | Msa0758230:intron | 40.0% | |
| ! | ATTGCCTCAGCTTGCTTTAA+AGG | + | chr5_2:13397547-13397566 | None:intergenic | 40.0% |
| !! | TGAGGTGTTGAATGATAGCT+TGG | - | chr5_2:13397582-13397601 | Msa0758230:intron | 40.0% |
| CAATGAAAATCCCACATTCC+TGG | + | chr5_2:13397682-13397701 | None:intergenic | 40.0% | |
| TGCGAATAAATGTGAGTGCA+AGG | - | chr5_2:13398102-13398121 | Msa0758230:intron | 40.0% | |
| AATGTGAGTGCAAGGAGTAA+TGG | - | chr5_2:13398110-13398129 | Msa0758230:intron | 40.0% | |
| CTATATGCCTTCCTCTGATT+TGG | + | chr5_2:13398390-13398409 | None:intergenic | 40.0% | |
| GTTCCGTATCTCACCATATT+TGG | + | chr5_2:13398443-13398462 | None:intergenic | 40.0% | |
| !! | AGGTGTTGTTAATTCTGCAG+GGG | + | chr5_2:13398523-13398542 | None:intergenic | 40.0% |
| !! | GAGGTGTTGTTAATTCTGCA+GGG | + | chr5_2:13398524-13398543 | None:intergenic | 40.0% |
| !! | AGAGGTGTTGTTAATTCTGC+AGG | + | chr5_2:13398525-13398544 | None:intergenic | 40.0% |
| !! | CTTGCTGTTTGAATTTAGGC+AGG | + | chr5_2:13398575-13398594 | None:intergenic | 40.0% |
| AGCATCAGCAGAAATCAAAG+AGG | - | chr5_2:13398641-13398660 | Msa0758230:intron | 40.0% | |
| GCATCAGCAGAAATCAAAGA+GGG | - | chr5_2:13398642-13398661 | Msa0758230:intron | 40.0% | |
| AGGACTTTGGATTTCAAAGG+AGG | + | chr5_2:13398728-13398747 | None:intergenic | 40.0% | |
| TCTGAAGGTGAAAAGGACTT+TGG | + | chr5_2:13398741-13398760 | None:intergenic | 40.0% | |
| ! | AAAGTCCTTTTCACCTTCAG+AGG | - | chr5_2:13398740-13398759 | Msa0758230:intron | 40.0% |
| GAGAATATCCTCTCTAGCAT+GGG | + | chr5_2:13398814-13398833 | None:intergenic | 40.0% | |
| GGAAGGATGATGTATTGTGT+TGG | + | chr5_2:13398848-13398867 | None:intergenic | 40.0% | |
| TCATTATTGACATGGGAGAG+TGG | + | chr5_2:13398869-13398888 | None:intergenic | 40.0% | |
| CTCTCCCATGTCAATAATGA+AGG | - | chr5_2:13398869-13398888 | Msa0758230:intron | 40.0% | |
| GAGGCCTTCATTATTGACAT+GGG | + | chr5_2:13398876-13398895 | None:intergenic | 40.0% | |
| CCAACTATCTGAAGATAAGG+AGG | + | chr5_2:13398895-13398914 | None:intergenic | 40.0% | |
| CCTCCTTATCTTCAGATAGT+TGG | - | chr5_2:13398892-13398911 | Msa0758230:intron | 40.0% | |
| ! | ACTTCCAATCTTTGTTTCCG+AGG | + | chr5_2:13398923-13398942 | None:intergenic | 40.0% |
| CTATGGTTGGATACTATGGT+TGG | + | chr5_2:13398954-13398973 | None:intergenic | 40.0% | |
| CATGTAACAAAGCCTCAAGT+TGG | + | chr5_2:13399053-13399072 | None:intergenic | 40.0% | |
| GTTTGTCATGATGTTGTCAC+TGG | - | chr5_2:13399367-13399386 | Msa0758230:intron | 40.0% | |
| GTCACTTATGCATATAAGGC+TGG | - | chr5_2:13399431-13399450 | Msa0758230:intron | 40.0% | |
| GGTGCAAAGAGTGATAATTC+TGG | - | chr5_2:13399452-13399471 | Msa0758230:intron | 40.0% | |
| GCAAAGAGTGATAATTCTGG+AGG | - | chr5_2:13399455-13399474 | Msa0758230:intron | 40.0% | |
| TAAAGCTCTGTTTGGGAGTT+TGG | - | chr5_2:13399628-13399647 | Msa0758230:CDS | 40.0% | |
| GAAGAAAGAATGGAGAGCTT+TGG | - | chr5_2:13399686-13399705 | Msa0758230:intron | 40.0% | |
| ! | TTTAGTTCCCCCAAATTAGG+AGG | + | chr5_2:13399747-13399766 | None:intergenic | 40.0% |
| ! | ATTGTATTGGACGAGGGTTT+TGG | - | chr5_2:13399769-13399788 | Msa0758230:intron | 40.0% |
| ! | TTGTATTGGACGAGGGTTTT+GGG | - | chr5_2:13399770-13399789 | Msa0758230:intron | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr5_2:13399978-13399997 | None:intergenic | 40.0% |
| TGCACCGAGGAAACATTATA+AGG | + | chr5_2:13400231-13400250 | None:intergenic | 40.0% | |
| !!! | TGACTTTTTTTTGCCCGATG+TGG | - | chr5_2:13400266-13400285 | Msa0758230:intron | 40.0% |
| TAAGCTTCTCAGTTTCGTGT+TGG | + | chr5_2:13400339-13400358 | None:intergenic | 40.0% | |
| AGAAGATGCGTAGTGAATTG+AGG | - | chr5_2:13400371-13400390 | Msa0758230:intron | 40.0% | |
| GTAATTCTTACCCCCTTTCA+AGG | + | chr5_2:13400541-13400560 | None:intergenic | 40.0% | |
| TTCAGGAAATCCACGCTTTA+AGG | - | chr5_2:13400833-13400852 | Msa0758230:intron | 40.0% | |
| TCAGGAAATCCACGCTTTAA+GGG | - | chr5_2:13400834-13400853 | Msa0758230:intron | 40.0% | |
| AGGAAACTAGAGAAGCTGTT+TGG | - | chr5_2:13400999-13401018 | Msa0758230:five_prime_UTR | 40.0% | |
| ! | AAGGCCCATTTGAAGTCTAA+TGG | + | chr5_2:13401089-13401108 | None:intergenic | 40.0% |
| AGCAAGGCAAGTAAATGAGT+TGG | + | chr5_2:13401183-13401202 | None:intergenic | 40.0% | |
| GAAGGGATTACGCGGTTTAT+TGG | + | chr5_2:13396534-13396553 | None:intergenic | 45.0% | |
| AGTTAAACCAACCCCGGAAT+TGG | + | chr5_2:13396859-13396878 | None:intergenic | 45.0% | |
| !! | AATTCCGGGGTTGGTTTAAC+TGG | - | chr5_2:13396858-13396877 | Msa0758230:intron | 45.0% |
| !! | GGTTTTGCTGGCTATGGAAT+TGG | - | chr5_2:13396879-13396898 | Msa0758230:intron | 45.0% |
| GGTTTCGATGGTTCGTTGTT+CGG | + | chr5_2:13397091-13397110 | None:intergenic | 45.0% | |
| AACGAACCATCGAAACCTCT+GGG | - | chr5_2:13397094-13397113 | Msa0758230:intron | 45.0% | |
| ATATGACCCAGAGGTTTCGA+TGG | + | chr5_2:13397103-13397122 | None:intergenic | 45.0% | |
| GTTTAACCGGTTGAACTGTC+CGG | - | chr5_2:13397193-13397212 | Msa0758230:intron | 45.0% | |
| ! | TGCCATTTCATTTGTGGACC+CGG | - | chr5_2:13397239-13397258 | Msa0758230:intron | 45.0% |
| ! | GTGGCCTTTTGGTCAAAGAT+CGG | + | chr5_2:13397381-13397400 | None:intergenic | 45.0% |
| !! | TGCACCCTTTGTTGTTGTGT+AGG | - | chr5_2:13397495-13397514 | Msa0758230:intron | 45.0% |
| TGTGTAGGTTAAGAGGCTTG+AGG | - | chr5_2:13397510-13397529 | Msa0758230:intron | 45.0% | |
| GTGTAGGTTAAGAGGCTTGA+GGG | - | chr5_2:13397511-13397530 | Msa0758230:intron | 45.0% | |
| !! | AGTGCCTTTAAAGCAAGCTG+AGG | - | chr5_2:13397540-13397559 | Msa0758230:intron | 45.0% |
| AAGCAAGCTGAGGCAATAAC+TGG | - | chr5_2:13397550-13397569 | Msa0758230:intron | 45.0% | |
| GGAGAATGTATCTCGGTCAT+TGG | - | chr5_2:13397603-13397622 | Msa0758230:intron | 45.0% | |
| TTCCTTGTGTTCTTAGGTGC+TGG | + | chr5_2:13398161-13398180 | None:intergenic | 45.0% | |
| TGGTCTCTATTTGGTTGCTG+AGG | + | chr5_2:13398290-13398309 | None:intergenic | 45.0% | |
| TTATTGCATTTGGCACGCTG+CGG | + | chr5_2:13398315-13398334 | None:intergenic | 45.0% | |
| TTTAGGCAGGTTGTCCACAA+GGG | + | chr5_2:13398562-13398581 | None:intergenic | 45.0% | |
| ATTTAGGCAGGTTGTCCACA+AGG | + | chr5_2:13398563-13398582 | None:intergenic | 45.0% | |
| GCGGTCATTTATTCCTCTGA+AGG | + | chr5_2:13398756-13398775 | None:intergenic | 45.0% | |
| AGGAATAAATGACCGCAACC+AGG | - | chr5_2:13398760-13398779 | Msa0758230:intron | 45.0% | |
| GGAATAAATGACCGCAACCA+GGG | - | chr5_2:13398761-13398780 | Msa0758230:intron | 45.0% | |
| ! | GAAGACTTGGTCAGTGAACT+AGG | + | chr5_2:13398789-13398808 | None:intergenic | 45.0% |
| TCTAGCATGGGAAGAAGACT+TGG | + | chr5_2:13398802-13398821 | None:intergenic | 45.0% | |
| GGAGAATATCCTCTCTAGCA+TGG | + | chr5_2:13398815-13398834 | None:intergenic | 45.0% | |
| TATTGACATGGGAGAGTGGA+AGG | + | chr5_2:13398865-13398884 | None:intergenic | 45.0% | |
| GGAGGCCTTCATTATTGACA+TGG | + | chr5_2:13398877-13398896 | None:intergenic | 45.0% | |
| TCAGATAGTTGGAACGACCT+CGG | - | chr5_2:13398903-13398922 | Msa0758230:intron | 45.0% | |
| ACGACCTCGGAAACAAAGAT+TGG | - | chr5_2:13398916-13398935 | Msa0758230:intron | 45.0% | |
| AGGGAGAACCATTCCGATAA+AGG | + | chr5_2:13399572-13399591 | None:intergenic | 45.0% | |
| TTTATCGGAATGGTTCTCCC+TGG | - | chr5_2:13399571-13399590 | Msa0758230:intron | 45.0% | |
| TTTGGGAGTTTGGAGAGGAT+GGG | - | chr5_2:13399638-13399657 | Msa0758230:CDS | 45.0% | |
| !! | AAAGAATGGAGAGCTTTGGG+AGG | - | chr5_2:13399690-13399709 | Msa0758230:intron | 45.0% |
| ! | TGTATTGGACGAGGGTTTTG+GGG | - | chr5_2:13399771-13399790 | Msa0758230:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr5_2:13399973-13399992 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | + | chr5_2:13399974-13399993 | None:intergenic | 45.0% |
| !! | GAGTGGGTTAGGCTTTGTTT+GGG | + | chr5_2:13399985-13400004 | None:intergenic | 45.0% |
| TCACAAGTCAGCTAGCCAAA+GGG | + | chr5_2:13400007-13400026 | None:intergenic | 45.0% | |
| ATCACAAGTCAGCTAGCCAA+AGG | + | chr5_2:13400008-13400027 | None:intergenic | 45.0% | |
| CTCAATTCGATAATGCACCG+AGG | + | chr5_2:13400244-13400263 | None:intergenic | 45.0% | |
| ATGCGTAGTGAATTGAGGTC+TGG | - | chr5_2:13400376-13400395 | Msa0758230:intron | 45.0% | |
| ! | ATTGTTCTGGGTTGTGGTGT+AGG | - | chr5_2:13400471-13400490 | Msa0758230:intron | 45.0% |
| GAGATAGATAAAGTCACGGC+TGG | - | chr5_2:13400497-13400516 | Msa0758230:intron | 45.0% | |
| TGTTTGACTGTAAGTGCAGG+AGG | - | chr5_2:13400639-13400658 | Msa0758230:CDS | 45.0% | |
| ACTGTAAGTGCAGGAGGATA+AGG | - | chr5_2:13400645-13400664 | Msa0758230:CDS | 45.0% | |
| CTGTAAGTGCAGGAGGATAA+GGG | - | chr5_2:13400646-13400665 | Msa0758230:CDS | 45.0% | |
| TCAATATACGAAGAACGGCG+AGG | + | chr5_2:13400933-13400952 | None:intergenic | 45.0% | |
| AAACAATTGCATGGCAGTGC+TGG | - | chr5_2:13401046-13401065 | Msa0758230:intron | 45.0% | |
| AGTACTCACAAGCAACAGCA+AGG | + | chr5_2:13401199-13401218 | None:intergenic | 45.0% | |
| TTGGAATCAAATGGCCGCTG+TGG | - | chr5_2:13396803-13396822 | Msa0758230:CDS | 50.0% | |
| GGGAGATTGAGGACCAATTC+CGG | - | chr5_2:13396843-13396862 | Msa0758230:intron | 50.0% | |
| GGAGATTGAGGACCAATTCC+GGG | - | chr5_2:13396844-13396863 | Msa0758230:intron | 50.0% | |
| GAGATTGAGGACCAATTCCG+GGG | - | chr5_2:13396845-13396864 | Msa0758230:intron | 50.0% | |
| CAACGAACCATCGAAACCTC+TGG | - | chr5_2:13397093-13397112 | Msa0758230:intron | 50.0% | |
| ACCAAACCGGACAGTTCAAC+CGG | + | chr5_2:13397202-13397221 | None:intergenic | 50.0% | |
| GCCATTTCATTTGTGGACCC+GGG | - | chr5_2:13397240-13397259 | Msa0758230:intron | 50.0% | |
| TGTGGGATCTTCTGACTGCA+AGG | - | chr5_2:13397421-13397440 | Msa0758230:intron | 50.0% | |
| GTTAAGAGGCTTGAGGGACA+AGG | - | chr5_2:13397517-13397536 | Msa0758230:intron | 50.0% | |
| ! | AACAGAAGTGCAGAGCTCAC+AGG | - | chr5_2:13397862-13397881 | Msa0758230:intron | 50.0% |
| GTCCAGCACCTAAGAACACA+AGG | - | chr5_2:13398156-13398175 | Msa0758230:intron | 50.0% | |
| GCTGCGGAATGGTCTCTATT+TGG | + | chr5_2:13398299-13398318 | None:intergenic | 50.0% | |
| TTGGGCAGCTAGCTAATTGC+AGG | + | chr5_2:13398359-13398378 | None:intergenic | 50.0% | |
| GTCTTCTTCCCATGCTAGAG+AGG | - | chr5_2:13398803-13398822 | Msa0758230:intron | 50.0% | |
| CTCTGTTTGGGAGTTTGGAG+AGG | - | chr5_2:13399633-13399652 | Msa0758230:CDS | 50.0% | |
| GTTTGGGAGTTTGGAGAGGA+TGG | - | chr5_2:13399637-13399656 | Msa0758230:CDS | 50.0% | |
| GAGTTTGGAGAGGATGGGAA+GGG | - | chr5_2:13399643-13399662 | Msa0758230:CDS | 50.0% | |
| !! | GTATTGGACGAGGGTTTTGG+GGG | - | chr5_2:13399772-13399791 | Msa0758230:intron | 50.0% |
| TTTGGGAGTTTGGAGGGGAA+GGG | + | chr5_2:13399968-13399987 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | + | chr5_2:13399975-13399994 | None:intergenic | 50.0% |
| !! | GGAGTGGGTTAGGCTTTGTT+TGG | + | chr5_2:13399986-13400005 | None:intergenic | 50.0% |
| AAAGCCTAACCCACTCCCTT+TGG | - | chr5_2:13399989-13400008 | Msa0758230:intron | 50.0% | |
| CGTGTTGGAGCAGAGAAAAG+TGG | + | chr5_2:13400324-13400343 | None:intergenic | 50.0% | |
| ! | TGGTGCATTGTTCTGGGTTG+TGG | - | chr5_2:13400465-13400484 | Msa0758230:intron | 50.0% |
| ATAAAGTCACGGCTGGACAG+CGG | - | chr5_2:13400504-13400523 | Msa0758230:intron | 50.0% | |
| GAATCAAATGGCCGCTGTGG+CGG | - | chr5_2:13396806-13396825 | Msa0758230:CDS | 55.0% | |
| TCCTCAATCTCCCCAATCGC+CGG | + | chr5_2:13396836-13396855 | None:intergenic | 55.0% | |
| TTGAGGACCAATTCCGGGGT+TGG | - | chr5_2:13396849-13396868 | Msa0758230:intron | 55.0% | |
| ACCGGTTGAACTGTCCGGTT+TGG | - | chr5_2:13397198-13397217 | Msa0758230:intron | 55.0% | |
| GCCCGGGTCCACAAATGAAA+TGG | + | chr5_2:13397244-13397263 | None:intergenic | 55.0% | |
| CCAAAAGGCCACTAACGTCC+CGG | - | chr5_2:13397389-13397408 | Msa0758230:intron | 55.0% | |
| ! | AGGGCTGCTCTCTCTAAGAG+AGG | + | chr5_2:13398543-13398562 | None:intergenic | 55.0% |
| CTTAGAGAGAGCAGCCCTTG+TGG | - | chr5_2:13398545-13398564 | Msa0758230:intron | 55.0% | |
| TGAACTAGGCACCCTGGTTG+CGG | + | chr5_2:13398775-13398794 | None:intergenic | 55.0% | |
| GGAGTTTGGAGAGGATGGGA+AGG | - | chr5_2:13399642-13399661 | Msa0758230:CDS | 55.0% | |
| !!! | GACGAGGGTTTTGGGGGTTT+GGG | - | chr5_2:13399778-13399797 | Msa0758230:intron | 55.0% |
| GTTTGGGAGTTTGGAGGGGA+AGG | + | chr5_2:13399969-13399988 | None:intergenic | 55.0% | |
| ! | CTAGCCAAAGGGAGTGGGTT+AGG | + | chr5_2:13399996-13400015 | None:intergenic | 55.0% |
| GTCAGCTAGCCAAAGGGAGT+GGG | + | chr5_2:13400001-13400020 | None:intergenic | 55.0% | |
| AGTCAGCTAGCCAAAGGGAG+TGG | + | chr5_2:13400002-13400021 | None:intergenic | 55.0% | |
| ! | CAATTGCATGGCAGTGCTGG+TGG | - | chr5_2:13401049-13401068 | Msa0758230:intron | 55.0% |
| TCCTGACTGCGTGGATGCAG+GGG | + | chr5_2:13397268-13397287 | None:intergenic | 60.0% | |
| GTCCTGACTGCGTGGATGCA+GGG | + | chr5_2:13397269-13397288 | None:intergenic | 60.0% | |
| TGTCCTGACTGCGTGGATGC+AGG | + | chr5_2:13397270-13397289 | None:intergenic | 60.0% | |
| ! | CCGGGACGTTAGTGGCCTTT+TGG | + | chr5_2:13397392-13397411 | None:intergenic | 60.0% |
| AGATCCCACATCCACGCAGC+CGG | + | chr5_2:13397411-13397430 | None:intergenic | 60.0% | |
| GCATTTGGCACGCTGCGGAA+TGG | + | chr5_2:13398310-13398329 | None:intergenic | 60.0% | |
| GGTCAGTGAACTAGGCACCC+TGG | + | chr5_2:13398781-13398800 | None:intergenic | 60.0% | |
| !!! | GGACGAGGGTTTTGGGGGTT+TGG | - | chr5_2:13399777-13399796 | Msa0758230:intron | 60.0% |
| GAGTTTGGAGGGGAAGGGAG+GGG | + | chr5_2:13399963-13399982 | None:intergenic | 60.0% | |
| GGAGTTTGGAGGGGAAGGGA+GGG | + | chr5_2:13399964-13399983 | None:intergenic | 60.0% | |
| CCAGCTGAGCCCTTAAAGCG+TGG | + | chr5_2:13400846-13400865 | None:intergenic | 60.0% | |
| !! | CCACGCTTTAAGGGCTCAGC+TGG | - | chr5_2:13400843-13400862 | Msa0758230:intron | 60.0% |
| !! | CAGTGCTGGTGGAGCTGAAG+TGG | - | chr5_2:13401060-13401079 | Msa0758230:intron | 60.0% |
| GCCGGCGATTGGGGAGATTG+AGG | - | chr5_2:13396832-13396851 | Msa0758230:intron | 65.0% | |
| TCCCCTGCATCCACGCAGTC+AGG | - | chr5_2:13397264-13397283 | Msa0758230:intron | 65.0% | |
| CCACGGATGTCCTGACTGCG+TGG | + | chr5_2:13397277-13397296 | None:intergenic | 65.0% | |
| CCACGCAGTCAGGACATCCG+TGG | - | chr5_2:13397274-13397293 | Msa0758230:intron | 65.0% | |
| GATCCCACATCCACGCAGCC+GGG | + | chr5_2:13397410-13397429 | None:intergenic | 65.0% | |
| !! | AGGGAGGGGAGGGCTTTGGA+GGG | + | chr5_2:13399949-13399968 | None:intergenic | 65.0% |
| ! | AAGGGAGGGGAGGGCTTTGG+AGG | + | chr5_2:13399950-13399969 | None:intergenic | 65.0% |
| TTGGAGGGGAAGGGAGGGGA+GGG | + | chr5_2:13399959-13399978 | None:intergenic | 65.0% | |
| TTTGGAGGGGAAGGGAGGGG+AGG | + | chr5_2:13399960-13399979 | None:intergenic | 65.0% | |
| GGGAGTTTGGAGGGGAAGGG+AGG | + | chr5_2:13399965-13399984 | None:intergenic | 65.0% | |
| AGTCACGGCTGGACAGCGGT+TGG | - | chr5_2:13400508-13400527 | Msa0758230:CDS | 65.0% | |
| TGTGGCGGCTTGCCGGCGAT+TGG | - | chr5_2:13396821-13396840 | Msa0758230:CDS | 70.0% | |
| GTGGCGGCTTGCCGGCGATT+GGG | - | chr5_2:13396822-13396841 | Msa0758230:CDS | 70.0% | |
| TGGCGGCTTGCCGGCGATTG+GGG | - | chr5_2:13396823-13396842 | Msa0758230:CDS | 70.0% | |
| TGCGTGGATGCAGGGGAGCC+CGG | + | chr5_2:13397261-13397280 | None:intergenic | 70.0% | |
| CCACGCAGCCGGGACGTTAG+TGG | + | chr5_2:13397400-13397419 | None:intergenic | 70.0% | |
| CCACTAACGTCCCGGCTGCG+TGG | - | chr5_2:13397397-13397416 | Msa0758230:intron | 70.0% | |
| ACGTCCCGGCTGCGTGGATG+TGG | - | chr5_2:13397403-13397422 | Msa0758230:intron | 70.0% | |
| CGTCCCGGCTGCGTGGATGT+GGG | - | chr5_2:13397404-13397423 | Msa0758230:intron | 70.0% | |
| GGGAAGGGAGGGGAGGGCTT+TGG | + | chr5_2:13399953-13399972 | None:intergenic | 70.0% | |
| TGGCCGCTGTGGCGGCTTGC+CGG | - | chr5_2:13396814-13396833 | Msa0758230:CDS | 75.0% | |
| TCGCCGGCAAGCCGCCACAG+CGG | + | chr5_2:13396820-13396839 | None:intergenic | 75.0% | |
| GCGTGGATGCAGGGGAGCCC+GGG | + | chr5_2:13397260-13397279 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 13396273 | 13401234 | 13396273 | ID=Msa0758230;Name=Msa0758230 |
| chr5_2 | mRNA | 13396273 | 13401234 | 13396273 | ID=Msa0758230-mRNA-1;Parent=Msa0758230;Name=Msa0758230-mRNA-1;_AED=0.19;_eAED=0.19;_QI=281|1|1|1|0.75|0.66|9|277|233 |
| chr5_2 | exon | 13396273 | 13396669 | 13396273 | ID=Msa0758230-mRNA-1:exon:6058;Parent=Msa0758230-mRNA-1 |
| chr5_2 | exon | 13396783 | 13396849 | 13396783 | ID=Msa0758230-mRNA-1:exon:6057;Parent=Msa0758230-mRNA-1 |
| chr5_2 | exon | 13396958 | 13397014 | 13396958 | ID=Msa0758230-mRNA-1:exon:6056;Parent=Msa0758230-mRNA-1 |
| chr5_2 | exon | 13397115 | 13397191 | 13397115 | ID=Msa0758230-mRNA-1:exon:6055;Parent=Msa0758230-mRNA-1 |
| chr5_2 | exon | 13399624 | 13399683 | 13399624 | ID=Msa0758230-mRNA-1:exon:6054;Parent=Msa0758230-mRNA-1 |
| chr5_2 | exon | 13399859 | 13399990 | 13399859 | ID=Msa0758230-mRNA-1:exon:6053;Parent=Msa0758230-mRNA-1 |
| chr5_2 | exon | 13400506 | 13400795 | 13400506 | ID=Msa0758230-mRNA-1:exon:6052;Parent=Msa0758230-mRNA-1 |
| chr5_2 | exon | 13400878 | 13401028 | 13400878 | ID=Msa0758230-mRNA-1:exon:6051;Parent=Msa0758230-mRNA-1 |
| chr5_2 | exon | 13401206 | 13401234 | 13401206 | ID=Msa0758230-mRNA-1:exon:6050;Parent=Msa0758230-mRNA-1 |
| chr5_2 | five_prime_UTR | 13401206 | 13401234 | 13401206 | ID=Msa0758230-mRNA-1:five_prime_utr;Parent=Msa0758230-mRNA-1 |
| chr5_2 | five_prime_UTR | 13400878 | 13401028 | 13400878 | ID=Msa0758230-mRNA-1:five_prime_utr;Parent=Msa0758230-mRNA-1 |
| chr5_2 | five_prime_UTR | 13400695 | 13400795 | 13400695 | ID=Msa0758230-mRNA-1:five_prime_utr;Parent=Msa0758230-mRNA-1 |
| chr5_2 | CDS | 13400506 | 13400694 | 13400506 | ID=Msa0758230-mRNA-1:cds;Parent=Msa0758230-mRNA-1 |
| chr5_2 | CDS | 13399859 | 13399990 | 13399859 | ID=Msa0758230-mRNA-1:cds;Parent=Msa0758230-mRNA-1 |
| chr5_2 | CDS | 13399624 | 13399683 | 13399624 | ID=Msa0758230-mRNA-1:cds;Parent=Msa0758230-mRNA-1 |
| chr5_2 | CDS | 13397115 | 13397191 | 13397115 | ID=Msa0758230-mRNA-1:cds;Parent=Msa0758230-mRNA-1 |
| chr5_2 | CDS | 13396958 | 13397014 | 13396958 | ID=Msa0758230-mRNA-1:cds;Parent=Msa0758230-mRNA-1 |
| chr5_2 | CDS | 13396783 | 13396849 | 13396783 | ID=Msa0758230-mRNA-1:cds;Parent=Msa0758230-mRNA-1 |
| chr5_2 | CDS | 13396550 | 13396669 | 13396550 | ID=Msa0758230-mRNA-1:cds;Parent=Msa0758230-mRNA-1 |
| chr5_2 | three_prime_UTR | 13396273 | 13396549 | 13396273 | ID=Msa0758230-mRNA-1:three_prime_utr;Parent=Msa0758230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
