Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078090 | XP_003625456.1 | 98.798 | 416 | 5 | 0 | 1 | 416 | 1 | 416 | 0.0 | 852 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078090 | sp|Q9SVU0|YUC8_ARATH | 75.059 | 425 | 95 | 4 | 1 | 415 | 1 | 424 | 0.0 | 672 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078090 | G7KZI9 | 98.798 | 416 | 5 | 0 | 1 | 416 | 1 | 416 | 0.0 | 852 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa1078090 | 0.806004 | 1.015253e-49 | -8.615850e-47 |
| Msa0011040 | Msa1078090 | 0.807191 | 5.701132e-50 | -8.615850e-47 |
| Msa0014590 | Msa1078090 | 0.809983 | 1.444911e-50 | -8.615850e-47 |
| Msa0048380 | Msa1078090 | 0.805140 | 1.541204e-49 | -8.615850e-47 |
| Msa0063540 | Msa1078090 | 0.807047 | 6.116273e-50 | -8.615850e-47 |
| Msa0073110 | Msa1078090 | 0.809038 | 2.305284e-50 | -8.615850e-47 |
| Msa0114610 | Msa1078090 | 0.805895 | 1.070273e-49 | -8.615850e-47 |
| Msa0604280 | Msa1078090 | 0.803398 | 3.552698e-49 | -8.615850e-47 |
| Msa0606600 | Msa1078090 | 0.806323 | 8.696077e-50 | -8.615850e-47 |
| Msa0631700 | Msa1078090 | 0.801314 | 9.546207e-49 | -8.615850e-47 |
| Msa0643190 | Msa1078090 | 0.814636 | 1.392761e-51 | -8.615850e-47 |
| Msa0647300 | Msa1078090 | 0.805481 | 1.307625e-49 | -8.615850e-47 |
| Msa0670360 | Msa1078090 | 0.802935 | 4.429238e-49 | -8.615850e-47 |
| Msa0686830 | Msa1078090 | 0.806646 | 7.435328e-50 | -8.615850e-47 |
| Msa0692090 | Msa1078090 | 0.802347 | 5.858712e-49 | -8.615850e-47 |
| Msa0711260 | Msa1078090 | 0.801897 | 7.250242e-49 | -8.615850e-47 |
| Msa0751960 | Msa1078090 | 0.814551 | 1.454795e-51 | -8.615850e-47 |
| Msa0806930 | Msa1078090 | 0.820313 | 7.328151e-53 | -8.615850e-47 |
| Msa0814160 | Msa1078090 | 0.835541 | 1.580309e-56 | -8.615850e-47 |
| Msa0831890 | Msa1078090 | 0.812845 | 3.452972e-51 | -8.615850e-47 |
| Msa0150920 | Msa1078090 | 0.814865 | 1.238947e-51 | -8.615850e-47 |
| Msa0190670 | Msa1078090 | 0.806274 | 8.908654e-50 | -8.615850e-47 |
| Msa0190890 | Msa1078090 | 0.802794 | 4.736456e-49 | -8.615850e-47 |
| Msa0194230 | Msa1078090 | 0.804218 | 2.400995e-49 | -8.615850e-47 |
| Msa0195580 | Msa1078090 | 0.809224 | 2.102594e-50 | -8.615850e-47 |
| Msa0233210 | Msa1078090 | 0.813701 | 2.240105e-51 | -8.615850e-47 |
| Msa0366510 | Msa1078090 | 0.809165 | 2.165567e-50 | -8.615850e-47 |
| Msa0374040 | Msa1078090 | 0.815824 | 7.583861e-52 | -8.615850e-47 |
| Msa0374470 | Msa1078090 | 0.802801 | 4.721843e-49 | -8.615850e-47 |
| Msa0374600 | Msa1078090 | 0.801320 | 9.517954e-49 | -8.615850e-47 |
| Msa0380680 | Msa1078090 | 0.804538 | 2.059268e-49 | -8.615850e-47 |
| Msa0386910 | Msa1078090 | 0.805233 | 1.473752e-49 | -8.615850e-47 |
| Msa0423220 | Msa1078090 | 0.804429 | 2.169796e-49 | -8.615850e-47 |
| Msa0452770 | Msa1078090 | 0.802789 | 4.748152e-49 | -8.615850e-47 |
| Msa0464310 | Msa1078090 | 0.819215 | 1.305831e-52 | -8.615850e-47 |
| Msa0471390 | Msa1078090 | 0.803962 | 2.714382e-49 | -8.615850e-47 |
| Msa0472390 | Msa1078090 | 0.806943 | 6.433813e-50 | -8.615850e-47 |
| Msa0996990 | Msa1078090 | 0.812542 | 4.022330e-51 | -8.615850e-47 |
| Msa1002820 | Msa1078090 | 0.820449 | 6.818647e-53 | -8.615850e-47 |
| Msa1006170 | Msa1078090 | 0.813480 | 2.505465e-51 | -8.615850e-47 |
| Msa1022490 | Msa1078090 | 0.801374 | 9.281057e-49 | -8.615850e-47 |
| Msa1022510 | Msa1078090 | 0.804375 | 2.226185e-49 | -8.615850e-47 |
| Msa1041910 | Msa1078090 | 0.801559 | 8.502917e-49 | -8.615850e-47 |
| Msa1061670 | Msa1078090 | 0.822186 | 2.710491e-53 | -8.615850e-47 |
| Msa1064940 | Msa1078090 | 0.800503 | 1.398007e-48 | -8.615850e-47 |
| Msa1068080 | Msa1078090 | 0.800917 | 1.150838e-48 | -8.615850e-47 |
| Msa1078090 | Msa1079820 | 0.802814 | 4.692778e-49 | -8.615850e-47 |
| Msa1078090 | Msa1087370 | 0.802786 | 4.756220e-49 | -8.615850e-47 |
| Msa1078090 | Msa1087380 | 0.806737 | 7.112891e-50 | -8.615850e-47 |
| Msa1078090 | Msa1106680 | 0.822529 | 2.256249e-53 | -8.615850e-47 |
| Msa1078090 | Msa1106960 | 0.820903 | 5.362106e-53 | -8.615850e-47 |
| Msa1078090 | Msa1123250 | 0.968536 | 8.108380e-129 | -8.615850e-47 |
| Msa1078090 | Msa1147010 | 0.812761 | 3.603838e-51 | -8.615850e-47 |
| Msa1078090 | Msa1156240 | 0.804255 | 2.358760e-49 | -8.615850e-47 |
| Msa1078090 | Msa1167960 | 0.804160 | 2.468030e-49 | -8.615850e-47 |
| Msa1078090 | Msa1181090 | 0.803145 | 4.008767e-49 | -8.615850e-47 |
| Msa1078090 | Msa1355340 | 0.817147 | 3.833310e-52 | -8.615850e-47 |
| Msa1078090 | Msa1419910 | 0.986693 | 1.193657e-167 | -8.615850e-47 |
| Msa1078090 | Msa1455360 | 0.826025 | 3.400799e-54 | -8.615850e-47 |
| Msa0261400 | Msa1078090 | 0.800276 | 1.555136e-48 | -8.615850e-47 |
| Msa0274250 | Msa1078090 | 0.804996 | 1.652141e-49 | -8.615850e-47 |
| Msa0281190 | Msa1078090 | 0.829381 | 5.315320e-55 | -8.615850e-47 |
| Msa0299030 | Msa1078090 | 0.817274 | 3.590172e-52 | -8.615850e-47 |
| Msa0307040 | Msa1078090 | 0.813444 | 2.552292e-51 | -8.615850e-47 |
| Msa0328090 | Msa1078090 | 0.800302 | 1.536171e-48 | -8.615850e-47 |
| Msa0348370 | Msa1078090 | 0.808415 | 3.132316e-50 | -8.615850e-47 |
| Msa0358470 | Msa1078090 | 0.809931 | 1.482672e-50 | -8.615850e-47 |
| Msa0490060 | Msa1078090 | 0.809262 | 2.063675e-50 | -8.615850e-47 |
| Msa0515130 | Msa1078090 | 0.804725 | 1.881794e-49 | -8.615850e-47 |
| Msa0523720 | Msa1078090 | 0.823649 | 1.236198e-53 | -8.615850e-47 |
| Msa0535570 | Msa1078090 | 0.812204 | 4.768899e-51 | -8.615850e-47 |
| Msa0591490 | Msa1078090 | 0.803620 | 3.196392e-49 | -8.615850e-47 |
| Msa0854840 | Msa1078090 | 0.819230 | 1.295528e-52 | -8.615850e-47 |
| Msa0861730 | Msa1078090 | 0.824910 | 6.246547e-54 | -8.615850e-47 |
| Msa0913550 | Msa1078090 | 0.814000 | 1.924684e-51 | -8.615850e-47 |
| Msa0951150 | Msa1078090 | 0.801478 | 8.835781e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078090 | MtrunA17_Chr7g0262591 | 98.798 | 416 | 5 | 0 | 1 | 416 | 1 | 416 | 0.0 | 852 |
| Msa1078090 | MtrunA17_Chr1g0182991 | 78.436 | 422 | 84 | 4 | 1 | 416 | 1 | 421 | 0.0 | 687 |
| Msa1078090 | MtrunA17_Chr7g0262471 | 97.231 | 325 | 9 | 0 | 92 | 416 | 213 | 537 | 0.0 | 657 |
| Msa1078090 | MtrunA17_Chr1g0169111 | 72.642 | 424 | 107 | 2 | 1 | 416 | 79 | 501 | 0.0 | 640 |
| Msa1078090 | MtrunA17_Chr1g0148801 | 58.268 | 381 | 156 | 2 | 17 | 395 | 9 | 388 | 4.02e-176 | 497 |
| Msa1078090 | MtrunA17_Chr1g0147221 | 58.974 | 390 | 153 | 3 | 17 | 400 | 35 | 423 | 9.71e-174 | 492 |
| Msa1078090 | MtrunA17_Chr3g0139441 | 59.536 | 388 | 149 | 3 | 19 | 399 | 34 | 420 | 7.24e-171 | 484 |
| Msa1078090 | MtrunA17_Chr6g0485621 | 56.391 | 399 | 160 | 5 | 9 | 395 | 16 | 412 | 1.38e-167 | 476 |
| Msa1078090 | MtrunA17_Chr7g0268621 | 45.953 | 383 | 195 | 4 | 25 | 400 | 7 | 384 | 5.89e-120 | 353 |
| Msa1078090 | MtrunA17_Chr7g0268611 | 42.480 | 379 | 206 | 4 | 25 | 396 | 9 | 382 | 2.86e-114 | 339 |
| Msa1078090 | MtrunA17_Chr5g0412881 | 45.093 | 377 | 195 | 4 | 25 | 394 | 7 | 378 | 8.39e-114 | 338 |
| Msa1078090 | MtrunA17_Chr8g0350371 | 45.067 | 375 | 194 | 3 | 25 | 392 | 7 | 376 | 1.51e-112 | 335 |
| Msa1078090 | MtrunA17_Chr3g0125711 | 43.850 | 374 | 196 | 4 | 25 | 390 | 8 | 375 | 2.27e-112 | 335 |
| Msa1078090 | MtrunA17_Chr3g0125701 | 43.164 | 373 | 200 | 3 | 25 | 390 | 8 | 375 | 4.49e-111 | 331 |
| Msa1078090 | MtrunA17_Chr3g0125691 | 42.895 | 373 | 201 | 3 | 25 | 390 | 8 | 375 | 1.93e-109 | 327 |
| Msa1078090 | MtrunA17_Chr4g0025641 | 48.241 | 199 | 97 | 2 | 25 | 217 | 17 | 215 | 5.90e-61 | 197 |
| Msa1078090 | MtrunA17_Chr4g0025651 | 41.667 | 156 | 89 | 2 | 236 | 390 | 15 | 169 | 3.62e-36 | 131 |
| Msa1078090 | MtrunA17_Chr3g0129991 | 40.336 | 119 | 65 | 1 | 82 | 194 | 1 | 119 | 4.28e-24 | 96.3 |
| Msa1078090 | MtrunA17_Chr3g0091441 | 23.140 | 242 | 139 | 6 | 26 | 228 | 15 | 248 | 2.51e-11 | 65.1 |
| Msa1078090 | MtrunA17_Chr7g0250581 | 86.667 | 30 | 4 | 0 | 84 | 113 | 1 | 30 | 4.87e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078090 | AT4G28720.1 | 75.059 | 425 | 95 | 4 | 1 | 415 | 1 | 424 | 0.0 | 672 |
| Msa1078090 | AT5G43890.1 | 72.813 | 423 | 105 | 4 | 1 | 414 | 1 | 422 | 0.0 | 644 |
| Msa1078090 | AT1G04180.1 | 72.381 | 420 | 109 | 4 | 1 | 414 | 1 | 419 | 0.0 | 637 |
| Msa1078090 | AT1G04610.1 | 68.019 | 419 | 124 | 2 | 7 | 416 | 20 | 437 | 0.0 | 603 |
| Msa1078090 | AT2G33230.1 | 66.667 | 423 | 130 | 3 | 3 | 416 | 11 | 431 | 0.0 | 569 |
| Msa1078090 | AT5G25620.1 | 60.199 | 402 | 151 | 5 | 9 | 402 | 16 | 416 | 5.61e-178 | 503 |
| Msa1078090 | AT5G25620.2 | 60.150 | 399 | 150 | 5 | 9 | 399 | 16 | 413 | 6.25e-177 | 501 |
| Msa1078090 | AT5G11320.1 | 58.438 | 397 | 159 | 2 | 19 | 415 | 12 | 402 | 4.97e-173 | 490 |
| Msa1078090 | AT4G32540.1 | 56.589 | 387 | 165 | 3 | 15 | 399 | 12 | 397 | 1.37e-167 | 476 |
| Msa1078090 | AT4G32540.2 | 56.041 | 389 | 166 | 4 | 15 | 399 | 12 | 399 | 7.72e-166 | 472 |
| Msa1078090 | AT4G13260.1 | 57.218 | 381 | 155 | 3 | 17 | 390 | 21 | 400 | 3.57e-162 | 462 |
| Msa1078090 | AT5G11320.2 | 59.752 | 323 | 129 | 1 | 19 | 341 | 12 | 333 | 1.68e-144 | 416 |
| Msa1078090 | AT4G13260.2 | 56.897 | 290 | 119 | 1 | 17 | 300 | 21 | 310 | 4.49e-125 | 364 |
| Msa1078090 | AT1G48910.1 | 45.308 | 373 | 192 | 4 | 25 | 390 | 6 | 373 | 4.06e-119 | 352 |
| Msa1078090 | AT1G21430.1 | 47.467 | 375 | 180 | 7 | 25 | 390 | 10 | 376 | 4.90e-117 | 347 |
| Msa1078090 | AT4G13260.3 | 56.207 | 290 | 119 | 3 | 108 | 390 | 9 | 297 | 4.14e-110 | 326 |
| Msa1078090 | AT1G65860.1 | 26.201 | 229 | 129 | 7 | 26 | 222 | 15 | 235 | 5.90e-15 | 77.0 |
| Msa1078090 | AT5G07800.1 | 25.346 | 217 | 122 | 5 | 26 | 202 | 18 | 234 | 8.83e-13 | 70.1 |
| Msa1078090 | AT5G45180.1 | 25.501 | 349 | 197 | 12 | 25 | 332 | 14 | 340 | 5.91e-12 | 67.8 |
Find 94 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGAAAGTCCTTCAATTTC+AGG | 0.167964 | 7_2:-76985359 | None:intergenic |
| TTCTCTCACGCCGTTGCATT+TGG | 0.196198 | 7_2:+76984928 | Msa1078090:CDS |
| GTTAAAATTGCACAAGATAT+TGG | 0.210104 | 7_2:+76986447 | Msa1078090:CDS |
| TGTTTCTTTGAAGGGTATTC+AGG | 0.234534 | 7_2:-76985155 | None:intergenic |
| CCATGTGGAAATGGCATCTT+TGG | 0.241543 | 7_2:-76986351 | None:intergenic |
| TTCACAAAGAGAGGGCTTTC+TGG | 0.253444 | 7_2:+76986408 | Msa1078090:CDS |
| CAATGTCCCTTCTTGGCTTC+AGG | 0.262510 | 7_2:+76986003 | Msa1078090:CDS |
| CACAAGATATTGGAAAAGTT+TGG | 0.264533 | 7_2:+76986457 | Msa1078090:CDS |
| GTTGTTGGATGTGGAAATTC+TGG | 0.276886 | 7_2:+76985452 | Msa1078090:CDS |
| ACCGCAGCAATGTCCCTTCT+TGG | 0.278978 | 7_2:+76985996 | Msa1078090:CDS |
| GTGCTACCTAGAGAAATATT+TGG | 0.304479 | 7_2:+76985656 | Msa1078090:CDS |
| GGTAGTTGACAGAATTGTTT+TGG | 0.312145 | 7_2:-76985107 | None:intergenic |
| TCTCTCACGCCGTTGCATTT+GGG | 0.312281 | 7_2:+76984929 | Msa1078090:CDS |
| AGAAGGAAAGACACCGGTTT+TGG | 0.315038 | 7_2:+76985835 | Msa1078090:CDS |
| GGTGAAGTTGAGCTTGTTAA+TGG | 0.336155 | 7_2:+76985932 | Msa1078090:CDS |
| CGCCGTTGCATTTGGGTCAA+TGG | 0.349348 | 7_2:+76984936 | Msa1078090:CDS |
| CCCTTCCAACCATGTGGAAA+TGG | 0.354454 | 7_2:-76986360 | None:intergenic |
| GAACACACTCGTTGAATTGC+GGG | 0.355699 | 7_2:-76985223 | None:intergenic |
| CATGGTTGGAAGGGAAATTC+AGG | 0.364067 | 7_2:+76986369 | Msa1078090:CDS |
| TATGCTTGTGATTACAAGTC+AGG | 0.381966 | 7_2:+76985401 | Msa1078090:CDS |
| GGAAAGAAAGTTCTTGTTGT+TGG | 0.397099 | 7_2:+76985437 | Msa1078090:CDS |
| GGGTATTCAGGGAAATCTTC+AGG | 0.406351 | 7_2:-76985143 | None:intergenic |
| CTTATGAATTGTTTCTTTGA+AGG | 0.406911 | 7_2:-76985164 | None:intergenic |
| TCTTCAGGCATTGGAAGGTT+AGG | 0.415876 | 7_2:-76985128 | None:intergenic |
| TCATCATGCTTTACCTTCCA+TGG | 0.420618 | 7_2:+76985502 | Msa1078090:CDS |
| TGGTATCAAAAGGCCTTCAA+TGG | 0.420704 | 7_2:+76985790 | Msa1078090:CDS |
| AAAGTTCTTGTTGTTGGATG+TGG | 0.420882 | 7_2:+76985443 | Msa1078090:CDS |
| ATCATAGGTGCAGGTCCATC+TGG | 0.430455 | 7_2:+76984966 | Msa1078090:CDS |
| AGGGACATTGCTGCGGTAAC+CGG | 0.431024 | 7_2:-76985990 | None:intergenic |
| ATCAAAAGGTTTAATAATCA+TGG | 0.435107 | 7_2:+76985911 | Msa1078090:CDS |
| TTCCATGGTTGTTCGTAGCT+CGG | 0.440887 | 7_2:+76985517 | Msa1078090:CDS |
| ATGAAGTTGAGTACATTTGT+AGG | 0.449172 | 7_2:+76985294 | Msa1078090:CDS |
| AACTTCAAAGGACCCATTGA+AGG | 0.449923 | 7_2:-76985803 | None:intergenic |
| TTATGAATTGTTTCTTTGAA+GGG | 0.463097 | 7_2:-76985163 | None:intergenic |
| CTGATTGCATAGCATCACTA+TGG | 0.465618 | 7_2:+76985048 | Msa1078090:CDS |
| GTTTCTTTGAAGGGTATTCA+GGG | 0.466361 | 7_2:-76985154 | None:intergenic |
| TCAGGGAAATCTTCAGGCAT+TGG | 0.472081 | 7_2:-76985137 | None:intergenic |
| TGTTGAAGTGGTTACCACTT+TGG | 0.479523 | 7_2:+76985708 | Msa1078090:CDS |
| GATATTCCAAATATTTCTCT+AGG | 0.498261 | 7_2:-76985662 | None:intergenic |
| TCTGTGTTCTTCAACTTCAA+AGG | 0.498901 | 7_2:-76985815 | None:intergenic |
| AGGTGGCTTGTTGTTGCTAC+CGG | 0.499132 | 7_2:+76985314 | Msa1078090:CDS |
| GAAGGACTTTCTGAATTCAA+AGG | 0.499261 | 7_2:+76985368 | Msa1078090:CDS |
| GCCATTTCCACATGGTTGGA+AGG | 0.503171 | 7_2:+76986359 | Msa1078090:CDS |
| AGATGCCATTTCCACATGGT+TGG | 0.512278 | 7_2:+76986355 | Msa1078090:CDS |
| GATGCAGTTGTTCTTGCTAC+CGG | 0.513400 | 7_2:+76985971 | Msa1078090:CDS |
| AAAGCACCAATGTCCAAAAC+CGG | 0.515634 | 7_2:-76985848 | None:intergenic |
| GTCAATGGACCTGTGATCAT+AGG | 0.520464 | 7_2:+76984951 | Msa1078090:CDS |
| CTTAACCCTCCACAATCCAC+TGG | 0.522153 | 7_2:-76985267 | None:intergenic |
| CATGTGGAAATGGCATCTTT+GGG | 0.531409 | 7_2:-76986350 | None:intergenic |
| AATTCAGGACTATATGCTGT+AGG | 0.534469 | 7_2:+76986384 | Msa1078090:CDS |
| ATGCTTGTGATTACAAGTCA+GGG | 0.545079 | 7_2:+76985402 | Msa1078090:CDS |
| TGTGTTACTCCTGAAATTGA+AGG | 0.546438 | 7_2:+76985350 | Msa1078090:CDS |
| GGTATCAAAAGGCCTTCAAT+GGG | 0.549973 | 7_2:+76985791 | Msa1078090:CDS |
| AGGTACAACATTTATGTCAC+CGG | 0.553155 | 7_2:-76985885 | None:intergenic |
| CCATTTCCACATGGTTGGAA+GGG | 0.558378 | 7_2:+76986360 | Msa1078090:CDS |
| ATATTCACCTGAAGCCAAGA+AGG | 0.558667 | 7_2:-76986010 | None:intergenic |
| TGAACACACTCGTTGAATTG+CGG | 0.561991 | 7_2:-76985224 | None:intergenic |
| GGAAATCTTCAGGCATTGGA+AGG | 0.566772 | 7_2:-76985133 | None:intergenic |
| ATGTTGTACCTGGAATCAAA+AGG | 0.567602 | 7_2:+76985897 | Msa1078090:CDS |
| GGACCTGTGATCATAGGTGC+AGG | 0.569251 | 7_2:+76984957 | Msa1078090:CDS |
| TAGCGGTTATGATGTTGAAG+TGG | 0.573120 | 7_2:+76985696 | Msa1078090:CDS |
| GCTTTGGAGAAAATTAGATC+CGG | 0.578995 | 7_2:+76985866 | Msa1078090:CDS |
| GCTGTAGGGTTCACAAAGAG+AGG | 0.580060 | 7_2:+76986399 | Msa1078090:CDS |
| GCTGCCGTTGCAAGACCAGA+TGG | 0.585259 | 7_2:-76984981 | None:intergenic |
| GTGAAGTTTCAATCTGTCGT+AGG | 0.589564 | 7_2:-76985081 | None:intergenic |
| ATTCAGGACTATATGCTGTA+GGG | 0.590290 | 7_2:+76986385 | Msa1078090:CDS |
| TTGAAGTTGAAGAACACAGA+AGG | 0.590910 | 7_2:+76985818 | Msa1078090:CDS |
| CCAAAGATGCCATTTCCACA+TGG | 0.597297 | 7_2:+76986351 | Msa1078090:CDS |
| GCAGCATGTCTTAGAGAACA+AGG | 0.601445 | 7_2:+76984999 | Msa1078090:CDS |
| TGGATGTGGAAATTCTGGAA+TGG | 0.605555 | 7_2:+76985457 | Msa1078090:CDS |
| AAGTTGAGTACATTTGTAGG+TGG | 0.605781 | 7_2:+76985297 | Msa1078090:CDS |
| GGTGACATAAATGTTGTACC+TGG | 0.608839 | 7_2:+76985887 | Msa1078090:CDS |
| TATTCACCTGAAGCCAAGAA+GGG | 0.613263 | 7_2:-76986009 | None:intergenic |
| CTGTAGGGTTCACAAAGAGA+GGG | 0.613353 | 7_2:+76986400 | Msa1078090:CDS |
| ATGATGAAACCAGTGGATTG+TGG | 0.614186 | 7_2:+76985258 | Msa1078090:CDS |
| GGACCTGCACCTATGATCAC+AGG | 0.615165 | 7_2:-76984960 | None:intergenic |
| GTCCATTGACCCAAATGCAA+CGG | 0.615198 | 7_2:-76984938 | None:intergenic |
| GTGGTTACCACTTTGGATTG+TGG | 0.615333 | 7_2:+76985715 | Msa1078090:CDS |
| AGCTCTTTCGAGAACAACGA+AGG | 0.625793 | 7_2:-76985027 | None:intergenic |
| AGGTCCATCTGGTCTTGCAA+CGG | 0.627266 | 7_2:+76984977 | Msa1078090:CDS |
| GAATTTCCCTTCCAACCATG+TGG | 0.635313 | 7_2:-76986366 | None:intergenic |
| GAGCTACGAACAACCATGGA+AGG | 0.637115 | 7_2:-76985515 | None:intergenic |
| GCAACGTCTATGACAAGCAG+TGG | 0.639607 | 7_2:-76986511 | None:intergenic |
| AGCTTGTCCACAATCCAAAG+TGG | 0.643807 | 7_2:-76985722 | None:intergenic |
| TACCGAGCTACGAACAACCA+TGG | 0.644442 | 7_2:-76985519 | None:intergenic |
| CAGCATGTCTTAGAGAACAA+GGG | 0.645300 | 7_2:+76985000 | Msa1078090:CDS |
| AGCATGTCTTAGAGAACAAG+GGG | 0.647019 | 7_2:+76985001 | Msa1078090:CDS |
| GCTAAGTATGATGAAACCAG+TGG | 0.647995 | 7_2:+76985251 | Msa1078090:CDS |
| AACGGCGTGAGAGAAAGTCT+TGG | 0.654245 | 7_2:-76984920 | None:intergenic |
| GCCAAGAAGGGACATTGCTG+CGG | 0.662896 | 7_2:-76985997 | None:intergenic |
| GCTCTTTCGAGAACAACGAA+GGG | 0.679788 | 7_2:-76985026 | None:intergenic |
| ATGAAACCAGTGGATTGTGG+AGG | 0.691994 | 7_2:+76985261 | Msa1078090:CDS |
| GAACACAGAAGGAAAGACAC+CGG | 0.709214 | 7_2:+76985829 | Msa1078090:CDS |
| TGAAACCAGTGGATTGTGGA+GGG | 0.710675 | 7_2:+76985262 | Msa1078090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGTAAAATTTTTTAACTT+AGG | + | chr7_2:76985584-76985603 | Msa1078090:intron | 10.0% |
| !!! | TCAAATTTAAAACTTTTTTA+AGG | + | chr7_2:76986202-76986221 | Msa1078090:intron | 10.0% |
| !!! | ATAGTAAAATTTTTTAACTT+AGG | + | chr7_2:76985584-76985603 | Msa1078090:intron | 10.0% |
| !!! | TCAAATTTAAAACTTTTTTA+AGG | + | chr7_2:76986202-76986221 | Msa1078090:intron | 10.0% |
| !!! | ATCAAGTAACTAATTAATTT+TGG | + | chr7_2:76986285-76986304 | Msa1078090:intron | 15.0% |
| !!! | ATCAAGTAACTAATTAATTT+TGG | + | chr7_2:76986285-76986304 | Msa1078090:intron | 15.0% |
| !!! | TTATGAATTGTTTCTTTGAA+GGG | - | chr7_2:76985166-76985185 | None:intergenic | 20.0% |
| !!! | AATATCAACTTTTGAATTAG+CGG | + | chr7_2:76985679-76985698 | Msa1078090:CDS | 20.0% |
| !! | ATCAAAAGGTTTAATAATCA+TGG | + | chr7_2:76985911-76985930 | Msa1078090:CDS | 20.0% |
| !!! | TAAAACTTTTTTAAGGCATA+TGG | + | chr7_2:76986209-76986228 | Msa1078090:intron | 20.0% |
| !!! | TAATTTTGGTTATGTTATAC+AGG | + | chr7_2:76986299-76986318 | Msa1078090:intron | 20.0% |
| !!! | TTATGAATTGTTTCTTTGAA+GGG | - | chr7_2:76985166-76985185 | None:intergenic | 20.0% |
| !!! | AATATCAACTTTTGAATTAG+CGG | + | chr7_2:76985679-76985698 | Msa1078090:CDS | 20.0% |
| !! | ATCAAAAGGTTTAATAATCA+TGG | + | chr7_2:76985911-76985930 | Msa1078090:CDS | 20.0% |
| !!! | TAAAACTTTTTTAAGGCATA+TGG | + | chr7_2:76986209-76986228 | Msa1078090:intron | 20.0% |
| !!! | TAATTTTGGTTATGTTATAC+AGG | + | chr7_2:76986299-76986318 | Msa1078090:intron | 20.0% |
| !! | CTTATGAATTGTTTCTTTGA+AGG | - | chr7_2:76985167-76985186 | None:intergenic | 25.0% |
| !!! | ATTTGTTAGCATAGTTTTCA+AGG | - | chr7_2:76985193-76985212 | None:intergenic | 25.0% |
| ! | TAGGATGAAAAAAATCTAAC+TGG | + | chr7_2:76985603-76985622 | Msa1078090:intron | 25.0% |
| ! | AGGATGAAAAAAATCTAACT+GGG | + | chr7_2:76985604-76985623 | Msa1078090:intron | 25.0% |
| !!! | TGTTCTGTTTTTTTTACTAC+AGG | + | chr7_2:76985628-76985647 | Msa1078090:intron | 25.0% |
| ! | GATATTCCAAATATTTCTCT+AGG | - | chr7_2:76985665-76985684 | None:intergenic | 25.0% |
| !!! | ATTTTGACATGGTTCATTTT+GGG | + | chr7_2:76985752-76985771 | Msa1078090:CDS | 25.0% |
| ! | TGGAAAAATATGGTATCAAA+AGG | + | chr7_2:76985780-76985799 | Msa1078090:CDS | 25.0% |
| !!! | TTATTAAACCTTTTGATTCC+AGG | - | chr7_2:76985908-76985927 | None:intergenic | 25.0% |
| ! | GTTAAAATTGCACAAGATAT+TGG | + | chr7_2:76986447-76986466 | Msa1078090:CDS | 25.0% |
| !! | CTTATGAATTGTTTCTTTGA+AGG | - | chr7_2:76985167-76985186 | None:intergenic | 25.0% |
| !!! | ATTTGTTAGCATAGTTTTCA+AGG | - | chr7_2:76985193-76985212 | None:intergenic | 25.0% |
| ! | TAGGATGAAAAAAATCTAAC+TGG | + | chr7_2:76985603-76985622 | Msa1078090:intron | 25.0% |
| ! | AGGATGAAAAAAATCTAACT+GGG | + | chr7_2:76985604-76985623 | Msa1078090:intron | 25.0% |
| !!! | TGTTCTGTTTTTTTTACTAC+AGG | + | chr7_2:76985628-76985647 | Msa1078090:intron | 25.0% |
| ! | GATATTCCAAATATTTCTCT+AGG | - | chr7_2:76985665-76985684 | None:intergenic | 25.0% |
| !!! | ATTTTGACATGGTTCATTTT+GGG | + | chr7_2:76985752-76985771 | Msa1078090:CDS | 25.0% |
| ! | TGGAAAAATATGGTATCAAA+AGG | + | chr7_2:76985780-76985799 | Msa1078090:CDS | 25.0% |
| !!! | TTATTAAACCTTTTGATTCC+AGG | - | chr7_2:76985908-76985927 | None:intergenic | 25.0% |
| ! | GTTAAAATTGCACAAGATAT+TGG | + | chr7_2:76986447-76986466 | Msa1078090:CDS | 25.0% |
| ATGAAGTTGAGTACATTTGT+AGG | + | chr7_2:76985294-76985313 | Msa1078090:CDS | 30.0% | |
| ! | AAGTCAGGGAAAAATTTTGA+AGG | + | chr7_2:76985416-76985435 | Msa1078090:CDS | 30.0% |
| ATTAATACTGACACAGATAC+CGG | - | chr7_2:76985561-76985580 | None:intergenic | 30.0% | |
| !!! | AGCTTTTGTTGATTTTGACA+TGG | + | chr7_2:76985741-76985760 | Msa1078090:CDS | 30.0% |
| !! | GATTTTGACATGGTTCATTT+TGG | + | chr7_2:76985751-76985770 | Msa1078090:CDS | 30.0% |
| TTTGGTTATGTTATACAGGA+AGG | + | chr7_2:76986303-76986322 | Msa1078090:intron | 30.0% | |
| ! | GGTGAATTTTTCTCCAAAAA+TGG | + | chr7_2:76986324-76986343 | Msa1078090:CDS | 30.0% |
| CACAAGATATTGGAAAAGTT+TGG | + | chr7_2:76986457-76986476 | Msa1078090:CDS | 30.0% | |
| ATGAAGTTGAGTACATTTGT+AGG | + | chr7_2:76985294-76985313 | Msa1078090:CDS | 30.0% | |
| ! | AAGTCAGGGAAAAATTTTGA+AGG | + | chr7_2:76985416-76985435 | Msa1078090:CDS | 30.0% |
| ATTAATACTGACACAGATAC+CGG | - | chr7_2:76985561-76985580 | None:intergenic | 30.0% | |
| !!! | AGCTTTTGTTGATTTTGACA+TGG | + | chr7_2:76985741-76985760 | Msa1078090:CDS | 30.0% |
| !! | GATTTTGACATGGTTCATTT+TGG | + | chr7_2:76985751-76985770 | Msa1078090:CDS | 30.0% |
| TTTGGTTATGTTATACAGGA+AGG | + | chr7_2:76986303-76986322 | Msa1078090:intron | 30.0% | |
| ! | GGTGAATTTTTCTCCAAAAA+TGG | + | chr7_2:76986324-76986343 | Msa1078090:CDS | 30.0% |
| CACAAGATATTGGAAAAGTT+TGG | + | chr7_2:76986457-76986476 | Msa1078090:CDS | 30.0% | |
| !!! | GTTGACAGAATTGTTTTGGA+AGG | - | chr7_2:76985106-76985125 | None:intergenic | 35.0% |
| ! | GGTAGTTGACAGAATTGTTT+TGG | - | chr7_2:76985110-76985129 | None:intergenic | 35.0% |
| !! | GTTTCTTTGAAGGGTATTCA+GGG | - | chr7_2:76985157-76985176 | None:intergenic | 35.0% |
| !! | TGTTTCTTTGAAGGGTATTC+AGG | - | chr7_2:76985158-76985177 | None:intergenic | 35.0% |
| AAGTTGAGTACATTTGTAGG+TGG | + | chr7_2:76985297-76985316 | Msa1078090:CDS | 35.0% | |
| ! | TGTGTTACTCCTGAAATTGA+AGG | + | chr7_2:76985350-76985369 | Msa1078090:CDS | 35.0% |
| TCAGAAAGTCCTTCAATTTC+AGG | - | chr7_2:76985362-76985381 | None:intergenic | 35.0% | |
| GAAGGACTTTCTGAATTCAA+AGG | + | chr7_2:76985368-76985387 | Msa1078090:CDS | 35.0% | |
| TATGCTTGTGATTACAAGTC+AGG | + | chr7_2:76985401-76985420 | Msa1078090:CDS | 35.0% | |
| ATGCTTGTGATTACAAGTCA+GGG | + | chr7_2:76985402-76985421 | Msa1078090:CDS | 35.0% | |
| ! | GGAAAGAAAGTTCTTGTTGT+TGG | + | chr7_2:76985437-76985456 | Msa1078090:CDS | 35.0% |
| !! | AAAGTTCTTGTTGTTGGATG+TGG | + | chr7_2:76985443-76985462 | Msa1078090:CDS | 35.0% |
| !!! | GTAAGTTCTTTTTCAGTGTC+CGG | + | chr7_2:76985539-76985558 | Msa1078090:intron | 35.0% |
| GTGCTACCTAGAGAAATATT+TGG | + | chr7_2:76985656-76985675 | Msa1078090:CDS | 35.0% | |
| TTGGGTGACATGGAAAAATA+TGG | + | chr7_2:76985770-76985789 | Msa1078090:CDS | 35.0% | |
| TCTGTGTTCTTCAACTTCAA+AGG | - | chr7_2:76985818-76985837 | None:intergenic | 35.0% | |
| TTGAAGTTGAAGAACACAGA+AGG | + | chr7_2:76985818-76985837 | Msa1078090:CDS | 35.0% | |
| !! | GCTTTGGAGAAAATTAGATC+CGG | + | chr7_2:76985866-76985885 | Msa1078090:CDS | 35.0% |
| AGGTACAACATTTATGTCAC+CGG | - | chr7_2:76985888-76985907 | None:intergenic | 35.0% | |
| ATGTTGTACCTGGAATCAAA+AGG | + | chr7_2:76985897-76985916 | Msa1078090:CDS | 35.0% | |
| TCTGGCTAAATCTTAGTTGT+TGG | + | chr7_2:76986090-76986109 | Msa1078090:intron | 35.0% | |
| ! | TCCGACAACAAAGATTTTAC+CGG | + | chr7_2:76986143-76986162 | Msa1078090:intron | 35.0% |
| ! | TCCGGTAAAATCTTTGTTGT+CGG | - | chr7_2:76986147-76986166 | None:intergenic | 35.0% |
| ! | ACATGTCTTTTTCTATCCTC+CGG | - | chr7_2:76986165-76986184 | None:intergenic | 35.0% |
| ! | CATCTTTGGGTATCCATTTT+TGG | - | chr7_2:76986340-76986359 | None:intergenic | 35.0% |
| AATTCAGGACTATATGCTGT+AGG | + | chr7_2:76986384-76986403 | Msa1078090:CDS | 35.0% | |
| ATTCAGGACTATATGCTGTA+GGG | + | chr7_2:76986385-76986404 | Msa1078090:CDS | 35.0% | |
| !!! | GTTGACAGAATTGTTTTGGA+AGG | - | chr7_2:76985106-76985125 | None:intergenic | 35.0% |
| ! | GGTAGTTGACAGAATTGTTT+TGG | - | chr7_2:76985110-76985129 | None:intergenic | 35.0% |
| !! | GTTTCTTTGAAGGGTATTCA+GGG | - | chr7_2:76985157-76985176 | None:intergenic | 35.0% |
| !! | TGTTTCTTTGAAGGGTATTC+AGG | - | chr7_2:76985158-76985177 | None:intergenic | 35.0% |
| AAGTTGAGTACATTTGTAGG+TGG | + | chr7_2:76985297-76985316 | Msa1078090:CDS | 35.0% | |
| ! | TGTGTTACTCCTGAAATTGA+AGG | + | chr7_2:76985350-76985369 | Msa1078090:CDS | 35.0% |
| TCAGAAAGTCCTTCAATTTC+AGG | - | chr7_2:76985362-76985381 | None:intergenic | 35.0% | |
| GAAGGACTTTCTGAATTCAA+AGG | + | chr7_2:76985368-76985387 | Msa1078090:CDS | 35.0% | |
| TATGCTTGTGATTACAAGTC+AGG | + | chr7_2:76985401-76985420 | Msa1078090:CDS | 35.0% | |
| ATGCTTGTGATTACAAGTCA+GGG | + | chr7_2:76985402-76985421 | Msa1078090:CDS | 35.0% | |
| ! | GGAAAGAAAGTTCTTGTTGT+TGG | + | chr7_2:76985437-76985456 | Msa1078090:CDS | 35.0% |
| !! | AAAGTTCTTGTTGTTGGATG+TGG | + | chr7_2:76985443-76985462 | Msa1078090:CDS | 35.0% |
| !!! | GTAAGTTCTTTTTCAGTGTC+CGG | + | chr7_2:76985539-76985558 | Msa1078090:intron | 35.0% |
| GTGCTACCTAGAGAAATATT+TGG | + | chr7_2:76985656-76985675 | Msa1078090:CDS | 35.0% | |
| TTGGGTGACATGGAAAAATA+TGG | + | chr7_2:76985770-76985789 | Msa1078090:CDS | 35.0% | |
| TCTGTGTTCTTCAACTTCAA+AGG | - | chr7_2:76985818-76985837 | None:intergenic | 35.0% | |
| TTGAAGTTGAAGAACACAGA+AGG | + | chr7_2:76985818-76985837 | Msa1078090:CDS | 35.0% | |
| !! | GCTTTGGAGAAAATTAGATC+CGG | + | chr7_2:76985866-76985885 | Msa1078090:CDS | 35.0% |
| AGGTACAACATTTATGTCAC+CGG | - | chr7_2:76985888-76985907 | None:intergenic | 35.0% | |
| ATGTTGTACCTGGAATCAAA+AGG | + | chr7_2:76985897-76985916 | Msa1078090:CDS | 35.0% | |
| TCTGGCTAAATCTTAGTTGT+TGG | + | chr7_2:76986090-76986109 | Msa1078090:intron | 35.0% | |
| ! | TCCGACAACAAAGATTTTAC+CGG | + | chr7_2:76986143-76986162 | Msa1078090:intron | 35.0% |
| ! | TCCGGTAAAATCTTTGTTGT+CGG | - | chr7_2:76986147-76986166 | None:intergenic | 35.0% |
| ! | ACATGTCTTTTTCTATCCTC+CGG | - | chr7_2:76986165-76986184 | None:intergenic | 35.0% |
| ! | CATCTTTGGGTATCCATTTT+TGG | - | chr7_2:76986340-76986359 | None:intergenic | 35.0% |
| AATTCAGGACTATATGCTGT+AGG | + | chr7_2:76986384-76986403 | Msa1078090:CDS | 35.0% | |
| ATTCAGGACTATATGCTGTA+GGG | + | chr7_2:76986385-76986404 | Msa1078090:CDS | 35.0% | |
| CAGCATGTCTTAGAGAACAA+GGG | + | chr7_2:76985000-76985019 | Msa1078090:CDS | 40.0% | |
| AGCATGTCTTAGAGAACAAG+GGG | + | chr7_2:76985001-76985020 | Msa1078090:CDS | 40.0% | |
| CTGATTGCATAGCATCACTA+TGG | + | chr7_2:76985048-76985067 | Msa1078090:CDS | 40.0% | |
| GTGAAGTTTCAATCTGTCGT+AGG | - | chr7_2:76985084-76985103 | None:intergenic | 40.0% | |
| TGAACACACTCGTTGAATTG+CGG | - | chr7_2:76985227-76985246 | None:intergenic | 40.0% | |
| GCTAAGTATGATGAAACCAG+TGG | + | chr7_2:76985251-76985270 | Msa1078090:CDS | 40.0% | |
| !! | ATGATGAAACCAGTGGATTG+TGG | + | chr7_2:76985258-76985277 | Msa1078090:CDS | 40.0% |
| GTTGTTGGATGTGGAAATTC+TGG | + | chr7_2:76985452-76985471 | Msa1078090:CDS | 40.0% | |
| ! | TGGATGTGGAAATTCTGGAA+TGG | + | chr7_2:76985457-76985476 | Msa1078090:CDS | 40.0% |
| TCATCATGCTTTACCTTCCA+TGG | + | chr7_2:76985502-76985521 | Msa1078090:CDS | 40.0% | |
| TAGCGGTTATGATGTTGAAG+TGG | + | chr7_2:76985696-76985715 | Msa1078090:CDS | 40.0% | |
| TGTTGAAGTGGTTACCACTT+TGG | + | chr7_2:76985708-76985727 | Msa1078090:CDS | 40.0% | |
| !! | ATGGTTCATTTTGGGTGACA+TGG | + | chr7_2:76985760-76985779 | Msa1078090:CDS | 40.0% |
| TGGTATCAAAAGGCCTTCAA+TGG | + | chr7_2:76985790-76985809 | Msa1078090:CDS | 40.0% | |
| GGTATCAAAAGGCCTTCAAT+GGG | + | chr7_2:76985791-76985810 | Msa1078090:CDS | 40.0% | |
| AACTTCAAAGGACCCATTGA+AGG | - | chr7_2:76985806-76985825 | None:intergenic | 40.0% | |
| ! | AAAGCACCAATGTCCAAAAC+CGG | - | chr7_2:76985851-76985870 | None:intergenic | 40.0% |
| GGTGACATAAATGTTGTACC+TGG | + | chr7_2:76985887-76985906 | Msa1078090:CDS | 40.0% | |
| !! | GGTGAAGTTGAGCTTGTTAA+TGG | + | chr7_2:76985932-76985951 | Msa1078090:CDS | 40.0% |
| TATTCACCTGAAGCCAAGAA+GGG | - | chr7_2:76986012-76986031 | None:intergenic | 40.0% | |
| ATATTCACCTGAAGCCAAGA+AGG | - | chr7_2:76986013-76986032 | None:intergenic | 40.0% | |
| ! | AGTTGACTTAGATCCTCTTC+TGG | + | chr7_2:76986063-76986082 | Msa1078090:intron | 40.0% |
| CAACTAAGATTTAGCCAGAG+CGG | - | chr7_2:76986089-76986108 | None:intergenic | 40.0% | |
| ! | GACAACAAAGATTTTACCGG+AGG | + | chr7_2:76986146-76986165 | Msa1078090:intron | 40.0% |
| CATGTGGAAATGGCATCTTT+GGG | - | chr7_2:76986353-76986372 | None:intergenic | 40.0% | |
| CAGCATGTCTTAGAGAACAA+GGG | + | chr7_2:76985000-76985019 | Msa1078090:CDS | 40.0% | |
| AGCATGTCTTAGAGAACAAG+GGG | + | chr7_2:76985001-76985020 | Msa1078090:CDS | 40.0% | |
| CTGATTGCATAGCATCACTA+TGG | + | chr7_2:76985048-76985067 | Msa1078090:CDS | 40.0% | |
| GTGAAGTTTCAATCTGTCGT+AGG | - | chr7_2:76985084-76985103 | None:intergenic | 40.0% | |
| TGAACACACTCGTTGAATTG+CGG | - | chr7_2:76985227-76985246 | None:intergenic | 40.0% | |
| GCTAAGTATGATGAAACCAG+TGG | + | chr7_2:76985251-76985270 | Msa1078090:CDS | 40.0% | |
| !! | ATGATGAAACCAGTGGATTG+TGG | + | chr7_2:76985258-76985277 | Msa1078090:CDS | 40.0% |
| GTTGTTGGATGTGGAAATTC+TGG | + | chr7_2:76985452-76985471 | Msa1078090:CDS | 40.0% | |
| ! | TGGATGTGGAAATTCTGGAA+TGG | + | chr7_2:76985457-76985476 | Msa1078090:CDS | 40.0% |
| TCATCATGCTTTACCTTCCA+TGG | + | chr7_2:76985502-76985521 | Msa1078090:CDS | 40.0% | |
| TAGCGGTTATGATGTTGAAG+TGG | + | chr7_2:76985696-76985715 | Msa1078090:CDS | 40.0% | |
| TGTTGAAGTGGTTACCACTT+TGG | + | chr7_2:76985708-76985727 | Msa1078090:CDS | 40.0% | |
| !! | ATGGTTCATTTTGGGTGACA+TGG | + | chr7_2:76985760-76985779 | Msa1078090:CDS | 40.0% |
| TGGTATCAAAAGGCCTTCAA+TGG | + | chr7_2:76985790-76985809 | Msa1078090:CDS | 40.0% | |
| GGTATCAAAAGGCCTTCAAT+GGG | + | chr7_2:76985791-76985810 | Msa1078090:CDS | 40.0% | |
| AACTTCAAAGGACCCATTGA+AGG | - | chr7_2:76985806-76985825 | None:intergenic | 40.0% | |
| ! | AAAGCACCAATGTCCAAAAC+CGG | - | chr7_2:76985851-76985870 | None:intergenic | 40.0% |
| GGTGACATAAATGTTGTACC+TGG | + | chr7_2:76985887-76985906 | Msa1078090:CDS | 40.0% | |
| !! | GGTGAAGTTGAGCTTGTTAA+TGG | + | chr7_2:76985932-76985951 | Msa1078090:CDS | 40.0% |
| TATTCACCTGAAGCCAAGAA+GGG | - | chr7_2:76986012-76986031 | None:intergenic | 40.0% | |
| ATATTCACCTGAAGCCAAGA+AGG | - | chr7_2:76986013-76986032 | None:intergenic | 40.0% | |
| ! | AGTTGACTTAGATCCTCTTC+TGG | + | chr7_2:76986063-76986082 | Msa1078090:intron | 40.0% |
| CAACTAAGATTTAGCCAGAG+CGG | - | chr7_2:76986089-76986108 | None:intergenic | 40.0% | |
| ! | GACAACAAAGATTTTACCGG+AGG | + | chr7_2:76986146-76986165 | Msa1078090:intron | 40.0% |
| CATGTGGAAATGGCATCTTT+GGG | - | chr7_2:76986353-76986372 | None:intergenic | 40.0% | |
| GTCCATTGACCCAAATGCAA+CGG | - | chr7_2:76984941-76984960 | None:intergenic | 45.0% | |
| GTCAATGGACCTGTGATCAT+AGG | + | chr7_2:76984951-76984970 | Msa1078090:CDS | 45.0% | |
| GCAGCATGTCTTAGAGAACA+AGG | + | chr7_2:76984999-76985018 | Msa1078090:CDS | 45.0% | |
| GCTCTTTCGAGAACAACGAA+GGG | - | chr7_2:76985029-76985048 | None:intergenic | 45.0% | |
| AGCTCTTTCGAGAACAACGA+AGG | - | chr7_2:76985030-76985049 | None:intergenic | 45.0% | |
| !! | TCTTCAGGCATTGGAAGGTT+AGG | - | chr7_2:76985131-76985150 | None:intergenic | 45.0% |
| !! | GGAAATCTTCAGGCATTGGA+AGG | - | chr7_2:76985136-76985155 | None:intergenic | 45.0% |
| TCAGGGAAATCTTCAGGCAT+TGG | - | chr7_2:76985140-76985159 | None:intergenic | 45.0% | |
| GGGTATTCAGGGAAATCTTC+AGG | - | chr7_2:76985146-76985165 | None:intergenic | 45.0% | |
| GAACACACTCGTTGAATTGC+GGG | - | chr7_2:76985226-76985245 | None:intergenic | 45.0% | |
| !! | ATGAAACCAGTGGATTGTGG+AGG | + | chr7_2:76985261-76985280 | Msa1078090:CDS | 45.0% |
| !! | TGAAACCAGTGGATTGTGGA+GGG | + | chr7_2:76985262-76985281 | Msa1078090:CDS | 45.0% |
| ! | AACACACTCAGCATTTTCGC+CGG | - | chr7_2:76985336-76985355 | None:intergenic | 45.0% |
| TTCCATGGTTGTTCGTAGCT+CGG | + | chr7_2:76985517-76985536 | Msa1078090:CDS | 45.0% | |
| GTGGTTACCACTTTGGATTG+TGG | + | chr7_2:76985715-76985734 | Msa1078090:CDS | 45.0% | |
| AGCTTGTCCACAATCCAAAG+TGG | - | chr7_2:76985725-76985744 | None:intergenic | 45.0% | |
| GAACACAGAAGGAAAGACAC+CGG | + | chr7_2:76985829-76985848 | Msa1078090:CDS | 45.0% | |
| !!! | AGAAGGAAAGACACCGGTTT+TGG | + | chr7_2:76985835-76985854 | Msa1078090:CDS | 45.0% |
| !!! | AAGACACCGGTTTTGGACAT+TGG | + | chr7_2:76985842-76985861 | Msa1078090:CDS | 45.0% |
| !!! | GGTTTTGGACATTGGTGCTT+TGG | + | chr7_2:76985850-76985869 | Msa1078090:CDS | 45.0% |
| GATGCAGTTGTTCTTGCTAC+CGG | + | chr7_2:76985971-76985990 | Msa1078090:CDS | 45.0% | |
| CCATGTGGAAATGGCATCTT+TGG | - | chr7_2:76986354-76986373 | None:intergenic | 45.0% | |
| ! | CCAAAGATGCCATTTCCACA+TGG | + | chr7_2:76986351-76986370 | Msa1078090:CDS | 45.0% |
| ! | AGATGCCATTTCCACATGGT+TGG | + | chr7_2:76986355-76986374 | Msa1078090:CDS | 45.0% |
| CCATTTCCACATGGTTGGAA+GGG | + | chr7_2:76986360-76986379 | Msa1078090:CDS | 45.0% | |
| GAATTTCCCTTCCAACCATG+TGG | - | chr7_2:76986369-76986388 | None:intergenic | 45.0% | |
| CATGGTTGGAAGGGAAATTC+AGG | + | chr7_2:76986369-76986388 | Msa1078090:CDS | 45.0% | |
| CTGTAGGGTTCACAAAGAGA+GGG | + | chr7_2:76986400-76986419 | Msa1078090:CDS | 45.0% | |
| TTCACAAAGAGAGGGCTTTC+TGG | + | chr7_2:76986408-76986427 | Msa1078090:CDS | 45.0% | |
| GTCCATTGACCCAAATGCAA+CGG | - | chr7_2:76984941-76984960 | None:intergenic | 45.0% | |
| GTCAATGGACCTGTGATCAT+AGG | + | chr7_2:76984951-76984970 | Msa1078090:CDS | 45.0% | |
| GCAGCATGTCTTAGAGAACA+AGG | + | chr7_2:76984999-76985018 | Msa1078090:CDS | 45.0% | |
| GCTCTTTCGAGAACAACGAA+GGG | - | chr7_2:76985029-76985048 | None:intergenic | 45.0% | |
| AGCTCTTTCGAGAACAACGA+AGG | - | chr7_2:76985030-76985049 | None:intergenic | 45.0% | |
| !! | TCTTCAGGCATTGGAAGGTT+AGG | - | chr7_2:76985131-76985150 | None:intergenic | 45.0% |
| !! | GGAAATCTTCAGGCATTGGA+AGG | - | chr7_2:76985136-76985155 | None:intergenic | 45.0% |
| TCAGGGAAATCTTCAGGCAT+TGG | - | chr7_2:76985140-76985159 | None:intergenic | 45.0% | |
| GGGTATTCAGGGAAATCTTC+AGG | - | chr7_2:76985146-76985165 | None:intergenic | 45.0% | |
| GAACACACTCGTTGAATTGC+GGG | - | chr7_2:76985226-76985245 | None:intergenic | 45.0% | |
| !! | ATGAAACCAGTGGATTGTGG+AGG | + | chr7_2:76985261-76985280 | Msa1078090:CDS | 45.0% |
| !! | TGAAACCAGTGGATTGTGGA+GGG | + | chr7_2:76985262-76985281 | Msa1078090:CDS | 45.0% |
| ! | AACACACTCAGCATTTTCGC+CGG | - | chr7_2:76985336-76985355 | None:intergenic | 45.0% |
| TTCCATGGTTGTTCGTAGCT+CGG | + | chr7_2:76985517-76985536 | Msa1078090:CDS | 45.0% | |
| GTGGTTACCACTTTGGATTG+TGG | + | chr7_2:76985715-76985734 | Msa1078090:CDS | 45.0% | |
| AGCTTGTCCACAATCCAAAG+TGG | - | chr7_2:76985725-76985744 | None:intergenic | 45.0% | |
| GAACACAGAAGGAAAGACAC+CGG | + | chr7_2:76985829-76985848 | Msa1078090:CDS | 45.0% | |
| !!! | AGAAGGAAAGACACCGGTTT+TGG | + | chr7_2:76985835-76985854 | Msa1078090:CDS | 45.0% |
| !!! | AAGACACCGGTTTTGGACAT+TGG | + | chr7_2:76985842-76985861 | Msa1078090:CDS | 45.0% |
| !!! | GGTTTTGGACATTGGTGCTT+TGG | + | chr7_2:76985850-76985869 | Msa1078090:CDS | 45.0% |
| GATGCAGTTGTTCTTGCTAC+CGG | + | chr7_2:76985971-76985990 | Msa1078090:CDS | 45.0% | |
| CCATGTGGAAATGGCATCTT+TGG | - | chr7_2:76986354-76986373 | None:intergenic | 45.0% | |
| ! | CCAAAGATGCCATTTCCACA+TGG | + | chr7_2:76986351-76986370 | Msa1078090:CDS | 45.0% |
| ! | AGATGCCATTTCCACATGGT+TGG | + | chr7_2:76986355-76986374 | Msa1078090:CDS | 45.0% |
| CCATTTCCACATGGTTGGAA+GGG | + | chr7_2:76986360-76986379 | Msa1078090:CDS | 45.0% | |
| GAATTTCCCTTCCAACCATG+TGG | - | chr7_2:76986369-76986388 | None:intergenic | 45.0% | |
| CATGGTTGGAAGGGAAATTC+AGG | + | chr7_2:76986369-76986388 | Msa1078090:CDS | 45.0% | |
| CTGTAGGGTTCACAAAGAGA+GGG | + | chr7_2:76986400-76986419 | Msa1078090:CDS | 45.0% | |
| TTCACAAAGAGAGGGCTTTC+TGG | + | chr7_2:76986408-76986427 | Msa1078090:CDS | 45.0% | |
| AACGGCGTGAGAGAAAGTCT+TGG | - | chr7_2:76984923-76984942 | None:intergenic | 50.0% | |
| TTCTCTCACGCCGTTGCATT+TGG | + | chr7_2:76984928-76984947 | Msa1078090:CDS | 50.0% | |
| TCTCTCACGCCGTTGCATTT+GGG | + | chr7_2:76984929-76984948 | Msa1078090:CDS | 50.0% | |
| ATCATAGGTGCAGGTCCATC+TGG | + | chr7_2:76984966-76984985 | Msa1078090:CDS | 50.0% | |
| !! | AGGTCCATCTGGTCTTGCAA+CGG | + | chr7_2:76984977-76984996 | Msa1078090:CDS | 50.0% |
| CTTAACCCTCCACAATCCAC+TGG | - | chr7_2:76985270-76985289 | None:intergenic | 50.0% | |
| !! | AGGTGGCTTGTTGTTGCTAC+CGG | + | chr7_2:76985314-76985333 | Msa1078090:CDS | 50.0% |
| GAGCTACGAACAACCATGGA+AGG | - | chr7_2:76985518-76985537 | None:intergenic | 50.0% | |
| TACCGAGCTACGAACAACCA+TGG | - | chr7_2:76985522-76985541 | None:intergenic | 50.0% | |
| CAATGTCCCTTCTTGGCTTC+AGG | + | chr7_2:76986003-76986022 | Msa1078090:CDS | 50.0% | |
| GCCATTTCCACATGGTTGGA+AGG | + | chr7_2:76986359-76986378 | Msa1078090:CDS | 50.0% | |
| CCCTTCCAACCATGTGGAAA+TGG | - | chr7_2:76986363-76986382 | None:intergenic | 50.0% | |
| GCTGTAGGGTTCACAAAGAG+AGG | + | chr7_2:76986399-76986418 | Msa1078090:CDS | 50.0% | |
| GCAACGTCTATGACAAGCAG+TGG | - | chr7_2:76986514-76986533 | None:intergenic | 50.0% | |
| AACGGCGTGAGAGAAAGTCT+TGG | - | chr7_2:76984923-76984942 | None:intergenic | 50.0% | |
| TTCTCTCACGCCGTTGCATT+TGG | + | chr7_2:76984928-76984947 | Msa1078090:CDS | 50.0% | |
| TCTCTCACGCCGTTGCATTT+GGG | + | chr7_2:76984929-76984948 | Msa1078090:CDS | 50.0% | |
| ATCATAGGTGCAGGTCCATC+TGG | + | chr7_2:76984966-76984985 | Msa1078090:CDS | 50.0% | |
| !! | AGGTCCATCTGGTCTTGCAA+CGG | + | chr7_2:76984977-76984996 | Msa1078090:CDS | 50.0% |
| CTTAACCCTCCACAATCCAC+TGG | - | chr7_2:76985270-76985289 | None:intergenic | 50.0% | |
| !! | AGGTGGCTTGTTGTTGCTAC+CGG | + | chr7_2:76985314-76985333 | Msa1078090:CDS | 50.0% |
| GAGCTACGAACAACCATGGA+AGG | - | chr7_2:76985518-76985537 | None:intergenic | 50.0% | |
| TACCGAGCTACGAACAACCA+TGG | - | chr7_2:76985522-76985541 | None:intergenic | 50.0% | |
| CAATGTCCCTTCTTGGCTTC+AGG | + | chr7_2:76986003-76986022 | Msa1078090:CDS | 50.0% | |
| GCCATTTCCACATGGTTGGA+AGG | + | chr7_2:76986359-76986378 | Msa1078090:CDS | 50.0% | |
| CCCTTCCAACCATGTGGAAA+TGG | - | chr7_2:76986363-76986382 | None:intergenic | 50.0% | |
| GCTGTAGGGTTCACAAAGAG+AGG | + | chr7_2:76986399-76986418 | Msa1078090:CDS | 50.0% | |
| GCAACGTCTATGACAAGCAG+TGG | - | chr7_2:76986514-76986533 | None:intergenic | 50.0% | |
| CGCCGTTGCATTTGGGTCAA+TGG | + | chr7_2:76984936-76984955 | Msa1078090:CDS | 55.0% | |
| GGACCTGTGATCATAGGTGC+AGG | + | chr7_2:76984957-76984976 | Msa1078090:CDS | 55.0% | |
| GGACCTGCACCTATGATCAC+AGG | - | chr7_2:76984963-76984982 | None:intergenic | 55.0% | |
| AGGGACATTGCTGCGGTAAC+CGG | - | chr7_2:76985993-76986012 | None:intergenic | 55.0% | |
| ACCGCAGCAATGTCCCTTCT+TGG | + | chr7_2:76985996-76986015 | Msa1078090:CDS | 55.0% | |
| GCCAAGAAGGGACATTGCTG+CGG | - | chr7_2:76986000-76986019 | None:intergenic | 55.0% | |
| CGCCGTTGCATTTGGGTCAA+TGG | + | chr7_2:76984936-76984955 | Msa1078090:CDS | 55.0% | |
| GGACCTGTGATCATAGGTGC+AGG | + | chr7_2:76984957-76984976 | Msa1078090:CDS | 55.0% | |
| GGACCTGCACCTATGATCAC+AGG | - | chr7_2:76984963-76984982 | None:intergenic | 55.0% | |
| AGGGACATTGCTGCGGTAAC+CGG | - | chr7_2:76985993-76986012 | None:intergenic | 55.0% | |
| ACCGCAGCAATGTCCCTTCT+TGG | + | chr7_2:76985996-76986015 | Msa1078090:CDS | 55.0% | |
| GCCAAGAAGGGACATTGCTG+CGG | - | chr7_2:76986000-76986019 | None:intergenic | 55.0% | |
| GCTGCCGTTGCAAGACCAGA+TGG | - | chr7_2:76984984-76985003 | None:intergenic | 60.0% | |
| AGATCCTCTTCTGGCCGCTC+TGG | + | chr7_2:76986072-76986091 | Msa1078090:intron | 60.0% | |
| TTAGCCAGAGCGGCCAGAAG+AGG | - | chr7_2:76986079-76986098 | None:intergenic | 60.0% | |
| GCTGCCGTTGCAAGACCAGA+TGG | - | chr7_2:76984984-76985003 | None:intergenic | 60.0% | |
| AGATCCTCTTCTGGCCGCTC+TGG | + | chr7_2:76986072-76986091 | Msa1078090:intron | 60.0% | |
| TTAGCCAGAGCGGCCAGAAG+AGG | - | chr7_2:76986079-76986098 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 76984891 | 76986548 | 76984891 | ID=Msa1078090;Name=Msa1078090 |
| chr7_2 | mRNA | 76984891 | 76986548 | 76984891 | ID=Msa1078090-mRNA-1;Parent=Msa1078090;Name=Msa1078090-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.5|0|1|1|1|3|0|416 |
| chr7_2 | exon | 76984891 | 76985538 | 76984891 | ID=Msa1078090-mRNA-1:exon:18719;Parent=Msa1078090-mRNA-1 |
| chr7_2 | exon | 76985650 | 76986024 | 76985650 | ID=Msa1078090-mRNA-1:exon:18720;Parent=Msa1078090-mRNA-1 |
| chr7_2 | exon | 76986321 | 76986548 | 76986321 | ID=Msa1078090-mRNA-1:exon:18721;Parent=Msa1078090-mRNA-1 |
| chr7_2 | CDS | 76984891 | 76985538 | 76984891 | ID=Msa1078090-mRNA-1:cds;Parent=Msa1078090-mRNA-1 |
| chr7_2 | CDS | 76985650 | 76986024 | 76985650 | ID=Msa1078090-mRNA-1:cds;Parent=Msa1078090-mRNA-1 |
| chr7_2 | CDS | 76986321 | 76986548 | 76986321 | ID=Msa1078090-mRNA-1:cds;Parent=Msa1078090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
