AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0374470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0374470 MtrunA17_Chr3g0124931 96.104 693 27 0 1 693 1 693 0.0 1398
Msa0374470 MtrunA17_Chr3g0130721 61.000 700 261 5 3 690 2 701 0.0 884
Msa0374470 MtrunA17_Chr3g0145581 48.184 716 350 7 7 702 9 723 0.0 706
Msa0374470 MtrunA17_Chr4g0037031 47.949 707 351 6 13 703 23 728 0.0 696
Msa0374470 MtrunA17_Chr2g0299161 51.247 722 304 15 6 687 9 722 0.0 692
Msa0374470 MtrunA17_Chr8g0342001 50.208 721 311 11 8 687 7 720 0.0 691
Msa0374470 MtrunA17_Chr2g0330291 51.195 711 298 12 18 687 21 723 0.0 683
Msa0374470 MtrunA17_Chr1g0152571 51.631 705 293 16 24 687 29 726 0.0 683
Msa0374470 MtrunA17_Chr1g0155701 49.224 709 315 13 26 694 29 732 0.0 669
Msa0374470 MtrunA17_Chr8g0372421 49.586 724 315 17 5 687 9 723 0.0 668
Msa0374470 MtrunA17_Chr3g0142001 50.211 711 301 14 26 692 28 729 0.0 668
Msa0374470 MtrunA17_Chr2g0326481 48.295 733 332 12 12 703 8 734 0.0 667
Msa0374470 MtrunA17_Chr5g0404841 49.725 726 308 15 6 687 8 720 0.0 666
Msa0374470 MtrunA17_Chr4g0029301 47.619 735 334 12 11 703 15 740 0.0 659
Msa0374470 MtrunA17_Chr3g0130711 47.390 728 334 12 7 687 5 730 0.0 628
Msa0374470 MtrunA17_Chr2g0301001 44.033 729 361 13 7 690 8 734 0.0 592
Msa0374470 MtrunA17_Chr8g0378221 43.860 741 338 15 25 695 49 781 0.0 590
Msa0374470 MtrunA17_Chr5g0406921 44.837 707 345 14 26 690 28 731 0.0 575
Msa0374470 MtrunA17_Chr5g0408371 45.084 712 343 16 26 695 28 733 0.0 570
Msa0374470 MtrunA17_Chr3g0077531 43.644 708 352 12 11 677 15 716 0.0 562
Msa0374470 MtrunA17_Chr2g0326491 49.035 518 212 6 11 478 7 522 9.07e-169 494
Msa0374470 MtrunA17_Chr2g0326441 59.011 283 114 1 11 293 7 287 2.26e-118 357
Msa0374470 MtrunA17_Chr2g0326451 39.813 427 205 11 323 703 25 445 7.76e-82 270
Msa0374470 MtrunA17_Chr5g0405781 41.743 218 100 2 145 362 21 211 5.98e-49 175
Msa0374470 MtrunA17_Chr4g0071281 44.571 175 89 3 476 642 10 184 6.02e-33 127
Msa0374470 MtrunA17_Chr2g0307981 31.746 252 152 6 453 690 59 304 6.16e-30 120
Msa0374470 MtrunA17_Chr4g0071291 36.970 165 63 3 25 186 21 147 1.09e-25 103
Msa0374470 MtrunA17_Chr8g0372581 41.135 141 62 3 147 287 9 128 5.77e-24 98.2
Msa0374470 MtrunA17_Chr2g0326521 33.333 234 96 8 504 703 1 208 2.39e-23 101
Msa0374470 MtrunA17_Chr2g0330191 29.254 335 195 9 42 345 70 393 3.07e-23 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0374470 AT1G77410.1 61.925 696 254 7 10 695 6 700 0.0 905
Msa0374470 AT1G77410.3 61.484 701 254 8 10 695 6 705 0.0 900
Msa0374470 AT5G63800.1 59.019 693 275 3 7 690 13 705 0.0 863
Msa0374470 AT1G77410.2 61.698 577 213 6 126 695 19 594 0.0 746
Msa0374470 AT1G77410.4 61.698 577 213 6 126 695 19 594 0.0 746
Msa0374470 AT3G13750.1 51.662 722 295 12 7 687 21 729 0.0 701
Msa0374470 AT4G26140.1 49.791 717 319 12 7 687 11 722 0.0 694
Msa0374470 AT4G35010.1 50.000 668 317 7 26 678 41 706 0.0 687
Msa0374470 AT3G52840.2 48.886 718 324 11 7 687 64 775 0.0 686
Msa0374470 AT3G52840.1 48.886 718 324 11 7 687 10 721 0.0 685
Msa0374470 AT4G26140.7 48.113 742 319 13 7 687 11 747 0.0 680
Msa0374470 AT2G16730.1 48.806 670 322 7 26 678 44 709 0.0 679
Msa0374470 AT5G56870.1 49.033 724 311 14 8 687 11 720 0.0 672
Msa0374470 AT4G36360.1 48.963 723 316 14 7 687 17 728 0.0 671
Msa0374470 AT4G36360.2 48.963 723 316 14 7 687 17 728 0.0 671
Msa0374470 AT2G28470.1 48.427 731 322 15 23 704 29 753 0.0 659
Msa0374470 AT2G28470.3 48.427 731 322 15 23 704 29 753 0.0 659
Msa0374470 AT1G45130.1 48.536 717 317 13 7 681 14 720 0.0 657
Msa0374470 AT2G28470.2 48.427 731 322 15 23 704 23 747 0.0 657
Msa0374470 AT2G28470.4 48.427 731 322 15 23 704 23 747 0.0 657
Msa0374470 AT4G26140.9 49.192 681 300 12 7 646 11 686 0.0 647
Msa0374470 AT5G63810.1 45.706 722 348 10 8 687 14 733 0.0 636
Msa0374470 AT4G38590.1 47.913 647 313 10 56 683 1 642 0.0 629
Msa0374470 AT2G28470.5 50.779 642 287 12 25 643 31 666 0.0 628
Msa0374470 AT4G38590.2 45.262 707 352 12 6 683 6 706 0.0 627
Msa0374470 AT2G32810.1 45.286 753 339 15 5 690 12 758 0.0 620
Msa0374470 AT2G32810.2 45.286 753 339 15 5 690 12 758 0.0 620
Msa0374470 AT4G26140.6 50.971 618 282 11 7 608 11 623 0.0 610
Msa0374470 AT4G26140.3 50.971 618 280 11 7 608 11 621 0.0 607
Msa0374470 AT4G26140.2 50.971 618 280 11 7 608 11 621 0.0 607
Msa0374470 AT5G20710.1 41.997 731 381 11 1 690 3 731 0.0 584
Msa0374470 AT1G31740.1 44.789 710 336 17 7 690 6 685 0.0 575
Msa0374470 AT4G26140.8 53.028 545 243 8 8 544 12 551 0.0 568
Msa0374470 AT1G45130.2 46.939 637 288 12 87 681 13 641 0.0 555
Msa0374470 AT4G26140.4 50.702 570 243 9 8 544 12 576 0.0 555
Msa0374470 AT4G26140.5 50.702 570 243 9 8 544 12 576 0.0 555
Msa0374470 AT5G20710.2 36.364 528 293 11 204 690 1 526 6.88e-110 346
Msa0374470 AT2G04060.1 32.213 357 172 8 293 643 23 315 2.29e-42 160
Msa0374470 AT2G04062.1 40.462 173 82 2 26 198 7 158 1.65e-38 140
Msa0374470 AT1G72990.3 28.967 397 238 9 36 402 18 400 2.37e-32 133
Msa0374470 AT1G72990.1 28.967 397 238 9 36 402 73 455 3.41e-32 133
Msa0374470 AT1G72990.4 28.967 397 238 9 36 402 73 455 3.41e-32 133
Msa0374470 AT1G72990.2 28.756 386 231 9 47 402 22 393 5.65e-29 123

Find 181 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAAGTATCGGCAAAATT+AGG 0.136464 3_1:-73945611 None:intergenic
CACAGAATGTGCTGCCTTCT+TGG 0.153848 3_1:+73945210 Msa0374470:CDS
GGCTTCAGGTTCACTCTAAA+AGG 0.155139 3_1:+73948050 Msa0374470:intron
TTTCATCATGTTGACTATTT+TGG 0.164006 3_1:-73943820 None:intergenic
AAGGGACTTGCTTGGGTTAA+TGG 0.191945 3_1:+73947327 Msa0374470:CDS
GCAATGTGGGAGAAACTTTA+AGG 0.207416 3_1:+73944319 Msa0374470:CDS
ACTATATGTGGTACACTTTC+AGG 0.210126 3_1:+73945684 Msa0374470:CDS
TCATACAAACTTACGTGTTT+TGG 0.226139 3_1:+73943028 Msa0374470:CDS
AGTTCAATTCAGCTGAAAAT+TGG 0.226601 3_1:+73945567 Msa0374470:CDS
TCCTTAAGATGTCCCCATTT+TGG 0.231023 3_1:-73944905 None:intergenic
AGTGCTTAACCTTGGTTCTA+TGG 0.238870 3_1:+73947302 Msa0374470:CDS
GCCAAGGTATTGGACGATAT+TGG 0.257316 3_1:+73947349 Msa0374470:CDS
GACATCTAATCCTCCTTCTT+TGG 0.263463 3_1:-73943007 None:intergenic
TTTGAAGTCCCACGGCCATT+TGG 0.264333 3_1:-73944053 None:intergenic
GTTTGGTTAGACAACCAAAA+TGG 0.279707 3_1:+73944891 Msa0374470:CDS
TAATCCTCCTTCTTTGGCTT+TGG 0.297718 3_1:-73943001 None:intergenic
TAAATGAAGGTTGGGTTGTT+AGG 0.307229 3_1:+73946851 Msa0374470:intron
TATGAACAAGGCAACATTAT+AGG 0.308128 3_1:-73944572 None:intergenic
ATTAATAGTTTACAAGCTTT+TGG 0.309185 3_1:+73944514 Msa0374470:intron
ATTGAGAGTGAATGCACTTA+TGG 0.315012 3_1:+73943478 Msa0374470:CDS
TTGAAGTCCCACGGCCATTT+GGG 0.331347 3_1:-73944052 None:intergenic
TCCCACTGTTGCACTAAGTA+TGG 0.332189 3_1:-73946176 None:intergenic
CTAAGAACAGATTGTGCATT+AGG 0.335456 3_1:-73945843 None:intergenic
TTGAAGTATCGGCAAAATTA+GGG 0.337323 3_1:-73945610 None:intergenic
GAAGGCTTGTTAGGAGAGTT+TGG 0.344500 3_1:-73944344 None:intergenic
TTGGGCAGCCCAACGAATAT+AGG 0.344539 3_1:-73944034 None:intergenic
ACCAAAATGGGGACATCTTA+AGG 0.354053 3_1:+73944904 Msa0374470:CDS
CAAAGTAAGTTTCGAGAGAA+TGG 0.355862 3_1:+73944006 Msa0374470:CDS
TAATTACTCATGGGGATATC+AGG 0.358295 3_1:+73946580 Msa0374470:CDS
TGGGTTAATGGCCAAGGTAT+TGG 0.361101 3_1:+73947339 Msa0374470:CDS
AGTGATTCCTAAGGGGTTCC+CGG 0.372281 3_1:-73947891 None:intergenic
TCACTTCTAAATACAATTCC+AGG 0.376793 3_1:-73943662 None:intergenic
GTTATACTTGAAGAAGAAAC+CGG 0.376857 3_1:+73947872 Msa0374470:CDS
CTATGGGAAAGGGACTTGCT+TGG 0.378634 3_1:+73947319 Msa0374470:CDS
TAATTGTGGTTTCATTGCTC+TGG 0.381958 3_1:-73945543 None:intergenic
GCTGTAGGGGTCTACCATTA+TGG 0.382065 3_1:+73943627 Msa0374470:intron
TAAACCACTCACATGGTATC+AGG 0.384274 3_1:+73946943 Msa0374470:CDS
CCAAGGTATTGGACGATATT+GGG 0.385483 3_1:+73947350 Msa0374470:CDS
AATATTTCGTATGAATTGCC+TGG 0.387602 3_1:+73945271 Msa0374470:CDS
TGTTGGTGAAATCAAAATCA+TGG 0.389952 3_1:+73941056 Msa0374470:exon
ATGTAGATTGAGAATGAATA+TGG 0.390011 3_1:+73943976 Msa0374470:intron
TAGTGGAAGGTTTGATTTAG+TGG 0.394049 3_1:+73943396 Msa0374470:CDS
TGTTCACAACCTCTACTTGA+TGG 0.396063 3_1:+73944950 Msa0374470:CDS
CTTCTGCAGTATGAGTTTAG+TGG 0.397314 3_1:+73943379 Msa0374470:intron
TATTCGTTGGGCTGCCCAAA+TGG 0.400359 3_1:+73944038 Msa0374470:CDS
GTCCATAGTGAAGGCTTGTT+AGG 0.404534 3_1:-73944353 None:intergenic
TTATATGTGACCCTTCGAAT+TGG 0.404622 3_1:+73943448 Msa0374470:CDS
AATTACTGAAATCTCTTCCT+TGG 0.408801 3_1:-73946562 None:intergenic
TATGGGAAAGGGACTTGCTT+GGG 0.409955 3_1:+73947320 Msa0374470:CDS
TTTGGTTAGACAACCAAAAT+GGG 0.416446 3_1:+73944892 Msa0374470:CDS
CTTCACTATGGACAGAGAAT+TGG 0.420589 3_1:+73944363 Msa0374470:CDS
TGGGCAGCCCAACGAATATA+GGG 0.423176 3_1:-73944033 None:intergenic
TTTACTCAAACCAGCAACTT+TGG 0.427160 3_1:-73946531 None:intergenic
TTATGGTTACATGATGTTCC+TGG 0.429910 3_1:+73943644 Msa0374470:CDS
GAAAGACTGACCACTGGATC+AGG 0.433772 3_1:-73944114 None:intergenic
AAAATGTCAATCTGATAAAC+GGG 0.436199 3_1:+73946140 Msa0374470:CDS
TTTCTAGAGACCAAAGTTGC+TGG 0.437416 3_1:+73946521 Msa0374470:CDS
TAGTGCAACAGTGGGATTGC+CGG 0.437529 3_1:+73946183 Msa0374470:CDS
TTGAGAGTGAATGCACTTAT+GGG 0.439807 3_1:+73943479 Msa0374470:CDS
CTCCTAACAAGCCTTCACTA+TGG 0.444788 3_1:+73944351 Msa0374470:CDS
TTGGGCTGCCCAAATGGCCG+TGG 0.445681 3_1:+73944044 Msa0374470:CDS
GAGGCTCCACTGGATGAATA+TGG 0.446906 3_1:+73944787 Msa0374470:CDS
AATTGGATTGTTACATCCCT+AGG 0.447987 3_1:-73945244 None:intergenic
TAAACCTGGGATAGTATGAT+AGG 0.451854 3_1:-73943873 None:intergenic
TGTTGTGAAGGAGTTCCATC+TGG 0.453218 3_1:-73947387 None:intergenic
TGGGTTGCCCTATATTCGTT+GGG 0.460338 3_1:+73944026 Msa0374470:CDS
CATCATAAAATCCTCTTCTC+TGG 0.461766 3_1:+73941186 Msa0374470:CDS
GGAACATCATGTAACCATAA+TGG 0.461861 3_1:-73943641 None:intergenic
AGTATTTCCTTTAGCTATAC+CGG 0.464149 3_1:-73948097 None:intergenic
CGTTCTTTCCTAAAATCGAC+TGG 0.470629 3_1:+73947839 Msa0374470:CDS
TCTGAAGCTGATCTCAAGTA+TGG 0.472062 3_1:-73944544 None:intergenic
AAAGTAAGTTTCGAGAGAAT+GGG 0.472636 3_1:+73944007 Msa0374470:CDS
ATGGGTTGCCCTATATTCGT+TGG 0.474004 3_1:+73944025 Msa0374470:CDS
GAAGAAACCGGGAACCCCTT+AGG 0.474106 3_1:+73947884 Msa0374470:CDS
TTAATTTCCAAAGCCAAAGA+AGG 0.474275 3_1:+73942994 Msa0374470:CDS
GTGCTTAACCTTGGTTCTAT+GGG 0.476524 3_1:+73947303 Msa0374470:CDS
GACTTCAAACCGGTGTGCCT+TGG 0.476862 3_1:+73944067 Msa0374470:CDS
GTGCATTCACTCTCAATGTA+TGG 0.478471 3_1:-73943472 None:intergenic
TTGGCTTTGGAAATTAAGTC+AGG 0.481878 3_1:-73942988 None:intergenic
CTTCTTCAAGTATAACAAGT+AGG 0.483081 3_1:-73947865 None:intergenic
GCTTCAGGTTCACTCTAAAA+GGG 0.485002 3_1:+73948051 Msa0374470:intron
AGAACATCGTTGGTCATTAA+CGG 0.485783 3_1:+73941162 Msa0374470:CDS
CCCAATATCGTCCAATACCT+TGG 0.486272 3_1:-73947350 None:intergenic
GTTGGTGAAATCAAAATCAT+GGG 0.486532 3_1:+73941057 Msa0374470:exon
AAGGAGTTCCATCTGGTTTG+TGG 0.487600 3_1:-73947380 None:intergenic
CAATGTGGGAGAAACTTTAA+GGG 0.489483 3_1:+73944320 Msa0374470:CDS
AACCTTGGTTCTATGGGAAA+GGG 0.490035 3_1:+73947309 Msa0374470:CDS
GAGATTTCAGTAATTACTCA+TGG 0.494226 3_1:+73946570 Msa0374470:CDS
TAACCTTGGTTCTATGGGAA+AGG 0.497639 3_1:+73947308 Msa0374470:CDS
AGTGGAAGGTTTGATTTAGT+GGG 0.498332 3_1:+73943397 Msa0374470:CDS
ATTAAAGAAATTCAAGCTCA+AGG 0.500012 3_1:+73943424 Msa0374470:CDS
AAGTGATAATGATCAATTCA+AGG 0.504392 3_1:+73943679 Msa0374470:CDS
GCTGCCTTCTTGGAAAATAG+TGG 0.505645 3_1:+73945220 Msa0374470:CDS
GCCTTGTTCATAGCAAAGAA+AGG 0.509544 3_1:+73944583 Msa0374470:CDS
TTATTATGATGAGGCTCCAC+TGG 0.510643 3_1:+73944777 Msa0374470:CDS
GAACCAAGGTTAAGCACTAC+AGG 0.511347 3_1:-73947297 None:intergenic
AGTTGCTGGTTTGAGTAAAG+TGG 0.516443 3_1:+73946535 Msa0374470:CDS
ATGGCCGTGGGACTTCAAAC+CGG 0.524566 3_1:+73944057 Msa0374470:CDS
GTGTCTAGAGTGATTCCTAA+GGG 0.526469 3_1:-73947899 None:intergenic
CTATCCTCGTAGCACTCCTC+AGG 0.528740 3_1:+73941218 Msa0374470:CDS
AAGACTACATTCTTGCAGCC+TGG 0.529766 3_1:-73945313 None:intergenic
CTACATTCTTGCAGCCTGGT+AGG 0.536592 3_1:-73945309 None:intergenic
CTTGGAAAATAGTGGACCTA+GGG 0.539564 3_1:+73945228 Msa0374470:CDS
GTGTCTCTTTGCACCGTCCA+TGG 0.539794 3_1:+73941120 Msa0374470:CDS
TCACGAGCCTCAACAAGGCC+AGG 0.541047 3_1:+73943056 Msa0374470:CDS
CAATGTATGGTCCAATTCGA+AGG 0.542390 3_1:-73943459 None:intergenic
CTTGCTTGGGTTAATGGCCA+AGG 0.543132 3_1:+73947333 Msa0374470:CDS
AGGATACTCATTGATTTCCC+AGG 0.544978 3_1:-73945289 None:intergenic
AAGATACATCTGACTATATG+TGG 0.549097 3_1:+73945672 Msa0374470:CDS
AGATTTCAGTAATTACTCAT+GGG 0.549878 3_1:+73946571 Msa0374470:CDS
ATATTTCGTATGAATTGCCT+GGG 0.552300 3_1:+73945272 Msa0374470:CDS
AGGACCTATCATACTATCCC+AGG 0.553587 3_1:+73943869 Msa0374470:CDS
ACCACATTCGATGCACCAGC+TGG 0.554238 3_1:+73947267 Msa0374470:CDS
TGTGTCTAGAGTGATTCCTA+AGG 0.556583 3_1:-73947900 None:intergenic
CAAGAAGGCAGCACATTCTG+TGG 0.556669 3_1:-73945209 None:intergenic
AAGTTATGTCAATTATTACA+TGG 0.562787 3_1:+73944606 Msa0374470:CDS
TCCTTTCTTTGCTATGAACA+AGG 0.565995 3_1:-73944584 None:intergenic
AAGAATGTAGTCTTCAACAC+CGG 0.567336 3_1:+73945322 Msa0374470:CDS
GCTGAATTGAACTTTAATTG+TGG 0.567491 3_1:-73945557 None:intergenic
TCTTGGAAAATAGTGGACCT+AGG 0.570208 3_1:+73945227 Msa0374470:CDS
GAAACATACCATTGTTGTGA+AGG 0.573167 3_1:-73947399 None:intergenic
TCTTACAAGCAAAGAGCCAC+CGG 0.573249 3_1:+73948078 Msa0374470:CDS
CTGTGAGCCTAAGCTGAAGG+TGG 0.573454 3_1:-73944981 None:intergenic
TGGGCTGCCCAAATGGCCGT+GGG 0.573977 3_1:+73944045 Msa0374470:CDS
CATGCAATGGCATGCAATGT+GGG 0.574956 3_1:+73944306 Msa0374470:CDS
ACTCAAACCACCTTCAGCTT+AGG 0.578526 3_1:+73944974 Msa0374470:CDS
TATCAAAATTAGTTCCTCCA+TGG 0.578938 3_1:-73944726 None:intergenic
ACGAATTTGATGCAGTACCA+TGG 0.579385 3_1:+73944709 Msa0374470:intron
TTGCAAATCTATTCAGTCAG+TGG 0.580451 3_1:+73946881 Msa0374470:CDS
CGTAGGTAACATTGCCACCA+TGG 0.581586 3_1:-73941137 None:intergenic
GATCCTGTAGTGCTTAACCT+TGG 0.586671 3_1:+73947294 Msa0374470:CDS
TCCATACTTAGTGCAACAGT+GGG 0.588438 3_1:+73946175 Msa0374470:CDS
TGCAGTATGAGTTTAGTGGA+AGG 0.589406 3_1:+73943383 Msa0374470:intron
GGTAACATTGCCACCATGGA+CGG 0.589509 3_1:-73941133 None:intergenic
ATTTCCAAAGCCAAAGAAGG+AGG 0.589753 3_1:+73942997 Msa0374470:CDS
CAATTCTCTGTCCATAGTGA+AGG 0.589841 3_1:-73944362 None:intergenic
CAACAATACGCAAGTTACAA+TGG 0.590171 3_1:+73946114 Msa0374470:CDS
GTATCTTTCCACAAACCAGA+TGG 0.590713 3_1:+73947372 Msa0374470:CDS
GAGGTTACCTGGCCTTGTTG+AGG 0.591838 3_1:-73943063 None:intergenic
GTTTGAGTTCCATCAAGTAG+AGG 0.592892 3_1:-73944959 None:intergenic
TACCTACGACAGAACATCGT+TGG 0.596916 3_1:+73941152 Msa0374470:CDS
TTGCTGTGAGCCTAAGCTGA+AGG 0.597462 3_1:-73944984 None:intergenic
ATGCAGATCAACGCATGCAA+TGG 0.599303 3_1:+73944293 Msa0374470:intron
CTCCATACTTAGTGCAACAG+TGG 0.602703 3_1:+73946174 Msa0374470:CDS
GTGGATCAAGTAAAGTTCAG+TGG 0.607801 3_1:+73946900 Msa0374470:CDS
TTAACTGTAGGTTCTGCACA+TGG 0.608812 3_1:+73946085 Msa0374470:intron
GCCAGCTGGTGCATCGAATG+TGG 0.611606 3_1:-73947268 None:intergenic
ACTACAGGATCATTGCCAGC+TGG 0.612769 3_1:-73947282 None:intergenic
AATAACAGCTTATTATGATG+AGG 0.614024 3_1:+73944768 Msa0374470:CDS
TCTTGTTTACACATCATCCA+AGG 0.616222 3_1:-73944084 None:intergenic
GATTTCAGTAATTACTCATG+GGG 0.616447 3_1:+73946572 Msa0374470:CDS
ACCATACCATATTCATCCAG+TGG 0.618114 3_1:-73944793 None:intergenic
GTTCTTAGTATATACAGTCA+AGG 0.620590 3_1:+73945858 Msa0374470:CDS
ATTTCCTTTAGCTATACCGG+TGG 0.628688 3_1:-73948094 None:intergenic
AGTGAATTGAACCAGAGAAG+AGG 0.633803 3_1:-73941197 None:intergenic
AGCTGTTATTATGAAAGCAG+AGG 0.636343 3_1:-73944755 None:intergenic
AGTATCGGCAAAATTAGGGA+TGG 0.638859 3_1:-73945606 None:intergenic
TTGAGTAAAGTGGAAGTCCA+AGG 0.642100 3_1:+73946545 Msa0374470:CDS
AAATCAAAATCATGGGAGAG+TGG 0.642102 3_1:+73941064 Msa0374470:exon
AATGTATGGTCCAATTCGAA+GGG 0.643269 3_1:-73943458 None:intergenic
TGTAGTCTTCAACACCGGCA+AGG 0.643630 3_1:+73945327 Msa0374470:CDS
ATGGAACTCCTTCACAACAA+TGG 0.646963 3_1:+73947391 Msa0374470:CDS
GTTCTTTCCTAAAATCGACT+GGG 0.647340 3_1:+73947840 Msa0374470:CDS
GTCCCTTTCCCATAGAACCA+AGG 0.648226 3_1:-73947311 None:intergenic
CACACCGGTTTGAAGTCCCA+CGG 0.651964 3_1:-73944061 None:intergenic
AGATGATGCTCCTGATCCAG+TGG 0.653215 3_1:+73944104 Msa0374470:CDS
AATCTTCACGAGCCTCAACA+AGG 0.655545 3_1:+73943051 Msa0374470:CDS
ACACATCATCCAAGGCACAC+CGG 0.656038 3_1:-73944076 None:intergenic
GACCAACGATGTTCTGTCGT+AGG 0.656925 3_1:-73941154 None:intergenic
GCATGCAATGGCATGCAATG+TGG 0.659047 3_1:+73944305 Msa0374470:CDS
TTATACTTGAAGAAGAAACC+GGG 0.659840 3_1:+73947873 Msa0374470:CDS
AAATCAATGAGTATCCTACC+AGG 0.665635 3_1:+73945295 Msa0374470:CDS
TCAAAATCATGGGAGAGTGG+TGG 0.675828 3_1:+73941067 Msa0374470:exon
GCTCTACTAAACCACTCACA+TGG 0.681185 3_1:+73946936 Msa0374470:CDS
TTGGTTAGACAACCAAAATG+GGG 0.683195 3_1:+73944893 Msa0374470:CDS
TCTCTTTGCACCGTCCATGG+TGG 0.685695 3_1:+73941123 Msa0374470:CDS
AATGTGGGAGAAACTTTAAG+GGG 0.688593 3_1:+73944321 Msa0374470:CDS
TGTCTAGAGTGATTCCTAAG+GGG 0.698523 3_1:-73947898 None:intergenic
ATTACCTGATACCATGTGAG+TGG 0.707159 3_1:-73946947 None:intergenic
AATTTGATGCAGTACCATGG+AGG 0.742597 3_1:+73944712 Msa0374470:intron
CGTACCTGAGGAGTGCTACG+AGG 0.747266 3_1:-73941222 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAATTAAATAATAT+TGG - chr3_1:73942402-73942421 None:intergenic 0.0%
!!! AAGTTTTTTTTTTTTTTTTG+AGG + chr3_1:73941339-73941358 Msa0374470:intron 10.0%
!! TCATATATGATTAATAAATT+TGG + chr3_1:73941788-73941807 Msa0374470:intron 10.0%
!! TATTAGTTAAACTATATTAT+CGG + chr3_1:73942260-73942279 Msa0374470:intron 10.0%
!! AAATAATTAAATAATATTGG+AGG - chr3_1:73942399-73942418 None:intergenic 10.0%
!! AATTTGATATGTTAATATTT+GGG + chr3_1:73946048-73946067 Msa0374470:intron 10.0%
!! TTCGTTAAAAAAAATATTTA+CGG + chr3_1:73947211-73947230 Msa0374470:intron 10.0%
!! TCACATATGAAAAATAAATT+TGG + chr3_1:73941685-73941704 Msa0374470:intron 15.0%
!! GTATACTTCATAAATAAAAT+TGG - chr3_1:73942020-73942039 None:intergenic 15.0%
!! ATTAGTTAAACTATATTATC+GGG + chr3_1:73942261-73942280 Msa0374470:intron 15.0%
!! TGATATATATAACTAACAAT+TGG - chr3_1:73942300-73942319 None:intergenic 15.0%
!! CGATATTATTAATTAAGATT+AGG + chr3_1:73942336-73942355 Msa0374470:intron 15.0%
!! AAGGAAAAAAAAACTTTATA+AGG + chr3_1:73942462-73942481 Msa0374470:intron 15.0%
!! AGGAAAAAAAAACTTTATAA+GGG + chr3_1:73942463-73942482 Msa0374470:intron 15.0%
!!! TTACATAATTTGTATGAATT+TGG + chr3_1:73942845-73942864 Msa0374470:intron 15.0%
!!! ATATTTGAAATTGTTTTTGT+TGG + chr3_1:73943930-73943949 Msa0374470:intron 15.0%
!! CAATTTGATATGTTAATATT+TGG + chr3_1:73946047-73946066 Msa0374470:intron 15.0%
!!! TAATTTTTGTAACTTATTAG+TGG - chr3_1:73946265-73946284 None:intergenic 15.0%
!!! AGATTATCTATGAATTTTTT+AGG - chr3_1:73947009-73947028 None:intergenic 15.0%
!! AAAAAATTCATAGATAATCT+TGG + chr3_1:73947009-73947028 Msa0374470:intron 15.0%
!!! TAATTTTCTATTTTTCTTCA+CGG + chr3_1:73947722-73947741 Msa0374470:intron 15.0%
!!! TTATTGTATGTTTTTAAAGC+TGG + chr3_1:73941431-73941450 Msa0374470:intron 20.0%
!! GTTATATTTCTTACCTAATA+AGG - chr3_1:73941533-73941552 None:intergenic 20.0%
!!! GTTTTATAATTCATTCAAGA+TGG - chr3_1:73941568-73941587 None:intergenic 20.0%
!!! TTCTTATGTTTTATCATTGA+TGG + chr3_1:73942078-73942097 Msa0374470:intron 20.0%
!!! CTAATTTTATATGTTTCACA+TGG + chr3_1:73942139-73942158 Msa0374470:intron 20.0%
!! AATTAAAAACTCTTTCTCAA+GGG - chr3_1:73942170-73942189 None:intergenic 20.0%
!! TAATTAAAAACTCTTTCTCA+AGG - chr3_1:73942171-73942190 None:intergenic 20.0%
!! ATTCACATAATTTCAGAAAA+AGG - chr3_1:73942227-73942246 None:intergenic 20.0%
!! TTAGTTAAACTATATTATCG+GGG + chr3_1:73942262-73942281 Msa0374470:intron 20.0%
!!! TCATCTTTTTCTATAAAAGA+AGG + chr3_1:73942651-73942670 Msa0374470:intron 20.0%
!!! ATTTTTAAGTAATACTCGAT+TGG - chr3_1:73942707-73942726 None:intergenic 20.0%
!! CAAATTATCTTGATATATGT+AGG + chr3_1:73942794-73942813 Msa0374470:intron 20.0%
!!! GTCATTTTGAAGAATTATTT+CGG - chr3_1:73942822-73942841 None:intergenic 20.0%
!! ATGCATAATGACATAAATAT+TGG - chr3_1:73942911-73942930 None:intergenic 20.0%
!! TATTTGGTATGAATATTGAA+TGG - chr3_1:73943563-73943582 None:intergenic 20.0%
!! ACAATTTCAAATATATGTAC+TGG - chr3_1:73943924-73943943 None:intergenic 20.0%
!!! CTTTCAAGTATTATTTATCA+TGG + chr3_1:73944132-73944151 Msa0374470:intron 20.0%
!!! TAAAAGAAAAACTGCAATTT+TGG - chr3_1:73944429-73944448 None:intergenic 20.0%
!!! ATTAATAGTTTACAAGCTTT+TGG + chr3_1:73944514-73944533 Msa0374470:intron 20.0%
!! AAGTTATGTCAATTATTACA+TGG + chr3_1:73944606-73944625 Msa0374470:CDS 20.0%
!! AAGAAAAATAAGCAGAAATT+CGG - chr3_1:73944676-73944695 None:intergenic 20.0%
!! AGTACTAGTTAAAAAAATTG+CGG - chr3_1:73945046-73945065 None:intergenic 20.0%
!! ACTAGTACTACTTAAATAAA+AGG + chr3_1:73945057-73945076 Msa0374470:intron 20.0%
!!! CATACGAAATATTTTGAAAT+TGG - chr3_1:73945264-73945283 None:intergenic 20.0%
!! TATCAAATTGTACAATAGAA+AGG - chr3_1:73946037-73946056 None:intergenic 20.0%
!! AAAAATGTCAATCTGATAAA+CGG + chr3_1:73946139-73946158 Msa0374470:CDS 20.0%
!!! TGTAATCCATAATCTTATTT+TGG - chr3_1:73946461-73946480 None:intergenic 20.0%
!!! GATGTAGAATTTTTAAATGA+AGG + chr3_1:73946838-73946857 Msa0374470:intron 20.0%
!!! TAGAATTTTTAAATGAAGGT+TGG + chr3_1:73946842-73946861 Msa0374470:intron 20.0%
!!! AGAATTTTTAAATGAAGGTT+GGG + chr3_1:73946843-73946862 Msa0374470:intron 20.0%
!!! GAATTTTTTAGGAAAGATAA+TGG - chr3_1:73946998-73947017 None:intergenic 20.0%
!! ACTAATATTTATTTACGTGT+TGG + chr3_1:73947237-73947256 Msa0374470:intron 20.0%
!! CTAATATTTATTTACGTGTT+GGG + chr3_1:73947238-73947257 Msa0374470:intron 20.0%
!! TAAACATTCTACATATTTCA+TGG - chr3_1:73947503-73947522 None:intergenic 20.0%
!!! CAACTGATATTTTTTTATTC+AGG + chr3_1:73947804-73947823 Msa0374470:intron 20.0%
!! AGAATTGATATACCATTATT+TGG + chr3_1:73948029-73948048 Msa0374470:intron 20.0%
!!! GAAACATTCTTTACTTTTGT+TGG + chr3_1:73941039-73941058 Msa0374470:five_prime_UTR 25.0%
!!! CATATATATCCTGTGTTTTT+TGG + chr3_1:73941252-73941271 Msa0374470:intron 25.0%
!!! TCTTTTAGAAAAGAGTAAAG+TGG - chr3_1:73941388-73941407 None:intergenic 25.0%
! AACATATGTAAGAAAAAGAG+AGG + chr3_1:73941471-73941490 Msa0374470:intron 25.0%
! TTATTCTCATTGTCCTTATT+AGG + chr3_1:73941517-73941536 Msa0374470:intron 25.0%
! ATAATTCATTCAAGATGGAA+TGG - chr3_1:73941563-73941582 None:intergenic 25.0%
! TTACAATAATGTGTGTAACA+TGG + chr3_1:73941990-73942009 Msa0374470:intron 25.0%
! TACAATAATGTGTGTAACAT+GGG + chr3_1:73941991-73942010 Msa0374470:intron 25.0%
!! TTTAATTTCTCAGTGAATCT+AGG + chr3_1:73942369-73942388 Msa0374470:intron 25.0%
!! AATAACGTGTAGCATATTTT+TGG + chr3_1:73942508-73942527 Msa0374470:intron 25.0%
! TATGATAACTAGTGCAATTA+AGG - chr3_1:73942542-73942561 None:intergenic 25.0%
! AATCATCTAAGTAAGTTCAA+AGG + chr3_1:73942623-73942642 Msa0374470:intron 25.0%
! AATGTACGTAACCAAAAAAA+AGG + chr3_1:73942724-73942743 Msa0374470:intron 25.0%
!! TTTTCATTCTCAAATTGTCT+TGG + chr3_1:73942868-73942887 Msa0374470:intron 25.0%
! ACATAAATATTGGAACCTAT+AGG - chr3_1:73942901-73942920 None:intergenic 25.0%
!!! GTTCATAATTTTAACAGATG+TGG + chr3_1:73942965-73942984 Msa0374470:intron 25.0%
! ATTATATTTATGCACCAATG+AGG - chr3_1:73943085-73943104 None:intergenic 25.0%
! AAAATAGATGATAAAACACG+AGG - chr3_1:73943112-73943131 None:intergenic 25.0%
! TTGTCCAAAAAAAAAATGCA+TGG + chr3_1:73943339-73943358 Msa0374470:intron 25.0%
!!! ACAACCATGCATTTTTTTTT+TGG - chr3_1:73943346-73943365 None:intergenic 25.0%
! ATTAAAGAAATTCAAGCTCA+AGG + chr3_1:73943424-73943443 Msa0374470:CDS 25.0%
! ATGTAGCAATGGAAAATATT+TGG - chr3_1:73943579-73943598 None:intergenic 25.0%
!!! TTTCTTCTAAAATGTAGCAA+TGG - chr3_1:73943590-73943609 None:intergenic 25.0%
!! AAGTGATAATGATCAATTCA+AGG + chr3_1:73943679-73943698 Msa0374470:CDS 25.0%
!! AACAAAAGTTATTGGTAGTT+TGG - chr3_1:73943707-73943726 None:intergenic 25.0%
!!! TTTCATCATGTTGACTATTT+TGG - chr3_1:73943823-73943842 None:intergenic 25.0%
! ATATTCATTCTCAATCTACA+TGG - chr3_1:73943977-73943996 None:intergenic 25.0%
! ATGTAGATTGAGAATGAATA+TGG + chr3_1:73943976-73943995 Msa0374470:intron 25.0%
! CAAGTATTATTTATCATGGA+TGG + chr3_1:73944136-73944155 Msa0374470:intron 25.0%
! TAAAACTCATGAAACTACTT+GGG - chr3_1:73944216-73944235 None:intergenic 25.0%
! AGCAAATTATCTTATCTAAC+TGG + chr3_1:73944465-73944484 Msa0374470:intron 25.0%
!!! GAATTTCTGCTTATTTTTCT+TGG + chr3_1:73944675-73944694 Msa0374470:intron 25.0%
!!! AGGAACTAATTTTGATAGAT+TGG + chr3_1:73944732-73944751 Msa0374470:CDS 25.0%
! AATAACAGCTTATTATGATG+AGG + chr3_1:73944768-73944787 Msa0374470:CDS 25.0%
! TAATTAAGAATGAATCTTCC+TGG + chr3_1:73945011-73945030 Msa0374470:intron 25.0%
!!! CTCATCGATTTTAAAAGTAA+TGG - chr3_1:73945441-73945460 None:intergenic 25.0%
! ATTTAGTTAGTGAAACTGAA+AGG + chr3_1:73945474-73945493 Msa0374470:intron 25.0%
!!! CATATTTTTTATGTTCGTGT+AGG + chr3_1:73945502-73945521 Msa0374470:intron 25.0%
! GATAGGAAAAAAACATCTTT+GGG + chr3_1:73945959-73945978 Msa0374470:intron 25.0%
!!! CTATACATGTTTTTAACTGT+AGG + chr3_1:73946073-73946092 Msa0374470:intron 25.0%
! AAAATGTCAATCTGATAAAC+GGG + chr3_1:73946140-73946159 Msa0374470:CDS 25.0%
! TTAACAATTGAGACAATTAC+CGG - chr3_1:73946205-73946224 None:intergenic 25.0%
!! CTTTCCTTTTTATTCATCAT+CGG + chr3_1:73946226-73946245 Msa0374470:intron 25.0%
! ATTGACAAATACTATGAAGA+TGG - chr3_1:73946297-73946316 None:intergenic 25.0%
! TGATAGCCAAAATAAGATTA+TGG + chr3_1:73946452-73946471 Msa0374470:intron 25.0%
!! TTCTTTTTACATGAAGAACT+CGG + chr3_1:73946493-73946512 Msa0374470:intron 25.0%
! AGATTTCAGTAATTACTCAT+GGG + chr3_1:73946571-73946590 Msa0374470:CDS 25.0%
!! TTCTTATACATTTTAAGCAG+TGG - chr3_1:73946751-73946770 None:intergenic 25.0%
! AAATTCATAGATAATCTTGG+AGG + chr3_1:73947012-73947031 Msa0374470:intron 25.0%
! AATTCATAGATAATCTTGGA+GGG + chr3_1:73947013-73947032 Msa0374470:intron 25.0%
!!! TATCTCAATCTTTCTAAGAT+TGG + chr3_1:73947099-73947118 Msa0374470:intron 25.0%
! TGTAGAATGTTTATAAACCA+TGG + chr3_1:73947510-73947529 Msa0374470:intron 25.0%
! ATGTTTATAAACCATGGAAA+AGG + chr3_1:73947516-73947535 Msa0374470:intron 25.0%
! TTGAGCATAGAGTTATAAAA+AGG - chr3_1:73947600-73947619 None:intergenic 25.0%
!! CAACATTTTCATTTCCATTT+AGG + chr3_1:73947617-73947636 Msa0374470:intron 25.0%
! GTTGTAAGTAAATAAATGCT+TGG - chr3_1:73947788-73947807 None:intergenic 25.0%
!! ATGATGTGTGATCTTTTAAA+TGG - chr3_1:73947952-73947971 None:intergenic 25.0%
! TGTTGGTGAAATCAAAATCA+TGG + chr3_1:73941056-73941075 Msa0374470:exon 30.0%
! GTTGGTGAAATCAAAATCAT+GGG + chr3_1:73941057-73941076 Msa0374470:exon 30.0%
!! ACTTTAGAACCAAAAAACAC+AGG - chr3_1:73941264-73941283 None:intergenic 30.0%
AAACATGAGTGCTTATCATA+TGG - chr3_1:73941412-73941431 None:intergenic 30.0%
ACAATAATGTGTGTAACATG+GGG + chr3_1:73941992-73942011 Msa0374470:intron 30.0%
TTTATATGTTTCACATGGTG+AGG + chr3_1:73942144-73942163 Msa0374470:intron 30.0%
GGAATATCATACTCACATAA+TGG - chr3_1:73942206-73942225 None:intergenic 30.0%
GCAAAACTAATGGTTTAACA+AGG + chr3_1:73942443-73942462 Msa0374470:intron 30.0%
TCTTATCTAACACGATTGTA+AGG - chr3_1:73942567-73942586 None:intergenic 30.0%
!!! CATCTTTGAAGCCTTTTTTT+TGG - chr3_1:73942738-73942757 None:intergenic 30.0%
TTAATTTCCAAAGCCAAAGA+AGG + chr3_1:73942994-73943013 Msa0374470:CDS 30.0%
! TCATACAAACTTACGTGTTT+TGG + chr3_1:73943028-73943047 Msa0374470:CDS 30.0%
ATACTTGCAAACAAAATGCA+TGG + chr3_1:73943313-73943332 Msa0374470:intron 30.0%
GTGCTGAAAATTAAATCTGT+GGG - chr3_1:73943513-73943532 None:intergenic 30.0%
TGTGCTGAAAATTAAATCTG+TGG - chr3_1:73943514-73943533 None:intergenic 30.0%
!!! AACTCTCAATTTTTTGCTGT+AGG + chr3_1:73943612-73943631 Msa0374470:intron 30.0%
!!! ACTCTCAATTTTTTGCTGTA+GGG + chr3_1:73943613-73943632 Msa0374470:intron 30.0%
TCACTTCTAAATACAATTCC+AGG - chr3_1:73943665-73943684 None:intergenic 30.0%
GGAAGGAAAACAAAAGTTAT+TGG - chr3_1:73943715-73943734 None:intergenic 30.0%
ACTACCAAAAATTGAATGCA+TGG - chr3_1:73943736-73943755 None:intergenic 30.0%
GTGAAACTGTCATTAAGAAA+AGG - chr3_1:73943784-73943803 None:intergenic 30.0%
TTGCATTGAAGTTTAAACCT+GGG - chr3_1:73943889-73943908 None:intergenic 30.0%
AAAGTAAGTTTCGAGAGAAT+GGG + chr3_1:73944007-73944026 Msa0374470:CDS 30.0%
GTAAAACTCATGAAACTACT+TGG - chr3_1:73944217-73944236 None:intergenic 30.0%
CTTCTAAACGATTCAACATT+AGG - chr3_1:73944239-73944258 None:intergenic 30.0%
! GATGTCATTTACTTAACGTT+TGG + chr3_1:73944491-73944510 Msa0374470:intron 30.0%
! AATAGTTTACAAGCTTTTGG+TGG + chr3_1:73944517-73944536 Msa0374470:intron 30.0%
TATGAACAAGGCAACATTAT+AGG - chr3_1:73944575-73944594 None:intergenic 30.0%
TATCAAAATTAGTTCCTCCA+TGG - chr3_1:73944729-73944748 None:intergenic 30.0%
TTTGGTTAGACAACCAAAAT+GGG + chr3_1:73944892-73944911 Msa0374470:CDS 30.0%
AATATTTCGTATGAATTGCC+TGG + chr3_1:73945271-73945290 Msa0374470:CDS 30.0%
ATATTTCGTATGAATTGCCT+GGG + chr3_1:73945272-73945291 Msa0374470:CDS 30.0%
GCTGAATTGAACTTTAATTG+TGG - chr3_1:73945560-73945579 None:intergenic 30.0%
AGTTCAATTCAGCTGAAAAT+TGG + chr3_1:73945567-73945586 Msa0374470:CDS 30.0%
!! TTGAAGTATCGGCAAAATTA+GGG - chr3_1:73945613-73945632 None:intergenic 30.0%
!! TTTGAAGTATCGGCAAAATT+AGG - chr3_1:73945614-73945633 None:intergenic 30.0%
AAGATACATCTGACTATATG+TGG + chr3_1:73945672-73945691 Msa0374470:CDS 30.0%
TGTCAACAATCATCTTAGTA+AGG - chr3_1:73945785-73945804 None:intergenic 30.0%
TTGACATGTTGAATTGTTGA+TGG + chr3_1:73945799-73945818 Msa0374470:intron 30.0%
GTTCTTAGTATATACAGTCA+AGG + chr3_1:73945858-73945877 Msa0374470:CDS 30.0%
GGATAGGAAAAAAACATCTT+TGG + chr3_1:73945958-73945977 Msa0374470:intron 30.0%
AGAATCATACGAATAGACAT+TGG + chr3_1:73946423-73946442 Msa0374470:intron 30.0%
! TCTTTTTACATGAAGAACTC+GGG + chr3_1:73946494-73946513 Msa0374470:intron 30.0%
AATTACTGAAATCTCTTCCT+TGG - chr3_1:73946565-73946584 None:intergenic 30.0%
GAGATTTCAGTAATTACTCA+TGG + chr3_1:73946570-73946589 Msa0374470:CDS 30.0%
GATTTCAGTAATTACTCATG+GGG + chr3_1:73946572-73946591 Msa0374470:CDS 30.0%
TGGATAATGATAGTTTCAAG+GGG - chr3_1:73946731-73946750 None:intergenic 30.0%
GTGGATAATGATAGTTTCAA+GGG - chr3_1:73946732-73946751 None:intergenic 30.0%
AGTGGATAATGATAGTTTCA+AGG - chr3_1:73946733-73946752 None:intergenic 30.0%
!! AATCTTTCTAAGATTGGACA+AGG + chr3_1:73947105-73947124 Msa0374470:intron 30.0%
!! ATCTTTCTAAGATTGGACAA+GGG + chr3_1:73947106-73947125 Msa0374470:intron 30.0%
GTCTTAAATACTTTACTCTG+TGG - chr3_1:73947429-73947448 None:intergenic 30.0%
! TATAACAGTTACCTTTTCCA+TGG - chr3_1:73947530-73947549 None:intergenic 30.0%
CTTCTTCAAGTATAACAAGT+AGG - chr3_1:73947868-73947887 None:intergenic 30.0%
GTTATACTTGAAGAAGAAAC+CGG + chr3_1:73947872-73947891 Msa0374470:CDS 30.0%
TTATACTTGAAGAAGAAACC+GGG + chr3_1:73947873-73947892 Msa0374470:CDS 30.0%
! ATATACCATTATTTGGCTTC+AGG + chr3_1:73948036-73948055 Msa0374470:intron 30.0%
AAATCAAAATCATGGGAGAG+TGG + chr3_1:73941064-73941083 Msa0374470:exon 35.0%
AGAACATCGTTGGTCATTAA+CGG + chr3_1:73941162-73941181 Msa0374470:CDS 35.0%
! CAGAGAAGAGGATTTTATGA+TGG - chr3_1:73941188-73941207 None:intergenic 35.0%
CATCATAAAATCCTCTTCTC+TGG + chr3_1:73941186-73941205 Msa0374470:CDS 35.0%
! GCTGAAACTTAAAGCACTTA+AGG + chr3_1:73941938-73941957 Msa0374470:intron 35.0%
!!! AACCATTAGTTTTGCCAAGA+CGG - chr3_1:73942438-73942457 None:intergenic 35.0%
AAGAATGTTTGACGATAGAG+TGG + chr3_1:73942583-73942602 Msa0374470:intron 35.0%
AGAATGTTTGACGATAGAGT+GGG + chr3_1:73942584-73942603 Msa0374470:intron 35.0%
!! TTGGCTTTGGAAATTAAGTC+AGG - chr3_1:73942991-73943010 None:intergenic 35.0%
CCACTGAATTTCAACTACTA+AGG - chr3_1:73943179-73943198 None:intergenic 35.0%
CCTTAGTAGTTGAAATTCAG+TGG + chr3_1:73943176-73943195 Msa0374470:intron 35.0%
ATGTGTGTCCCACAAAAATT+TGG + chr3_1:73943212-73943231 Msa0374470:intron 35.0%
! TAGTGGAAGGTTTGATTTAG+TGG + chr3_1:73943396-73943415 Msa0374470:CDS 35.0%
! AGTGGAAGGTTTGATTTAGT+GGG + chr3_1:73943397-73943416 Msa0374470:CDS 35.0%
TTATATGTGACCCTTCGAAT+TGG + chr3_1:73943448-73943467 Msa0374470:CDS 35.0%
AATGTATGGTCCAATTCGAA+GGG - chr3_1:73943461-73943480 None:intergenic 35.0%
ATTGAGAGTGAATGCACTTA+TGG + chr3_1:73943478-73943497 Msa0374470:CDS 35.0%
TTGAGAGTGAATGCACTTAT+GGG + chr3_1:73943479-73943498 Msa0374470:CDS 35.0%
!!! CTCTCAATTTTTTGCTGTAG+GGG + chr3_1:73943614-73943633 Msa0374470:intron 35.0%
GGAACATCATGTAACCATAA+TGG - chr3_1:73943644-73943663 None:intergenic 35.0%
TTATGGTTACATGATGTTCC+TGG + chr3_1:73943644-73943663 Msa0374470:CDS 35.0%
CCAAAAATTGAATGCATGGA+AGG - chr3_1:73943732-73943751 None:intergenic 35.0%
! CCTTCCATGCATTCAATTTT+TGG + chr3_1:73943729-73943748 Msa0374470:intron 35.0%
TCCTTGTGAAGCAAAAAGAT+TGG - chr3_1:73943850-73943869 None:intergenic 35.0%
! AATCTTTTTGCTTCACAAGG+AGG + chr3_1:73943849-73943868 Msa0374470:CDS 35.0%
TAAACCTGGGATAGTATGAT+AGG - chr3_1:73943876-73943895 None:intergenic 35.0%
GTTGCATTGAAGTTTAAACC+TGG - chr3_1:73943890-73943909 None:intergenic 35.0%
CAAAGTAAGTTTCGAGAGAA+TGG + chr3_1:73944006-73944025 Msa0374470:CDS 35.0%
! TCTTGTTTACACATCATCCA+AGG - chr3_1:73944087-73944106 None:intergenic 35.0%
! CTCCGTCTATTTTATATCGT+CGG + chr3_1:73944169-73944188 Msa0374470:intron 35.0%
GACCGACGATATAAAATAGA+CGG - chr3_1:73944174-73944193 None:intergenic 35.0%
CAATGTGGGAGAAACTTTAA+GGG + chr3_1:73944320-73944339 Msa0374470:CDS 35.0%
AATGTGGGAGAAACTTTAAG+GGG + chr3_1:73944321-73944340 Msa0374470:CDS 35.0%
! TCCTTTCTTTGCTATGAACA+AGG - chr3_1:73944587-73944606 None:intergenic 35.0%
AGCTGTTATTATGAAAGCAG+AGG - chr3_1:73944758-73944777 None:intergenic 35.0%
GTTTGGTTAGACAACCAAAA+TGG + chr3_1:73944891-73944910 Msa0374470:CDS 35.0%
TTGGTTAGACAACCAAAATG+GGG + chr3_1:73944893-73944912 Msa0374470:CDS 35.0%
AAATTGCGGAAAATATGTCC+AGG - chr3_1:73945032-73945051 None:intergenic 35.0%
! TTTTCTCACCTTTTTCCTTC+AGG + chr3_1:73945168-73945187 Msa0374470:intron 35.0%
AACATAAGCCTGAAGGAAAA+AGG - chr3_1:73945179-73945198 None:intergenic 35.0%
! TTCTGAAAACATAAGCCTGA+AGG - chr3_1:73945186-73945205 None:intergenic 35.0%
AATTGGATTGTTACATCCCT+AGG - chr3_1:73945247-73945266 None:intergenic 35.0%
AAATCAATGAGTATCCTACC+AGG + chr3_1:73945295-73945314 Msa0374470:CDS 35.0%
AAGAATGTAGTCTTCAACAC+CGG + chr3_1:73945322-73945341 Msa0374470:CDS 35.0%
! AACATTCGATTTTACCTTGC+CGG - chr3_1:73945344-73945363 None:intergenic 35.0%
ATGGTCAAATCAAGTAAAGC+AGG - chr3_1:73945422-73945441 None:intergenic 35.0%
TAATTGTGGTTTCATTGCTC+TGG - chr3_1:73945546-73945565 None:intergenic 35.0%
!!! GTCTGCTCTTTTTGAAGTAT+CGG - chr3_1:73945624-73945643 None:intergenic 35.0%
ACTATATGTGGTACACTTTC+AGG + chr3_1:73945684-73945703 Msa0374470:CDS 35.0%
CTAAGAACAGATTGTGCATT+AGG - chr3_1:73945846-73945865 None:intergenic 35.0%
! GTTTTGCATTCTTTCGTCAA+TGG + chr3_1:73945885-73945904 Msa0374470:CDS 35.0%
!! TTCGTCAATGGAGTTTTAAC+AGG + chr3_1:73945897-73945916 Msa0374470:CDS 35.0%
AGCACTAAATCTCATTTCTG+AGG + chr3_1:73945922-73945941 Msa0374470:intron 35.0%
! TTCTGAGGATCATGTTTCTT+AGG + chr3_1:73945937-73945956 Msa0374470:intron 35.0%
AGGATCATGTTTCTTAGGAT+AGG + chr3_1:73945942-73945961 Msa0374470:intron 35.0%
CAACAATACGCAAGTTACAA+TGG + chr3_1:73946114-73946133 Msa0374470:CDS 35.0%
CTTGCCGATGATGAATAAAA+AGG - chr3_1:73946233-73946252 None:intergenic 35.0%
AGGTAGAAGAAACTTCTCAA+TGG - chr3_1:73946344-73946363 None:intergenic 35.0%
! AGTCTTGTGATCTCAAATCT+AGG - chr3_1:73946364-73946383 None:intergenic 35.0%
! GATTTGAGATCACAAGACTA+TGG + chr3_1:73946365-73946384 Msa0374470:intron 35.0%
TTTACTCAAACCAGCAACTT+TGG - chr3_1:73946534-73946553 None:intergenic 35.0%
TAATTACTCATGGGGATATC+AGG + chr3_1:73946580-73946599 Msa0374470:CDS 35.0%
! TAAATGAAGGTTGGGTTGTT+AGG + chr3_1:73946851-73946870 Msa0374470:intron 35.0%
TTGCAAATCTATTCAGTCAG+TGG + chr3_1:73946881-73946900 Msa0374470:CDS 35.0%
GTAGGAGAAACAAAAAACCA+AGG - chr3_1:73947062-73947081 None:intergenic 35.0%
AGAATCTAGCACAAAGTAGT+AGG - chr3_1:73947080-73947099 None:intergenic 35.0%
TAAATGCTTAGCAGTTATGC+TGG - chr3_1:73947155-73947174 None:intergenic 35.0%
GAAACATACCATTGTTGTGA+AGG - chr3_1:73947402-73947421 None:intergenic 35.0%
GACTGTTTAGAAGACCTAAA+TGG - chr3_1:73947634-73947653 None:intergenic 35.0%
GTTCTTTCCTAAAATCGACT+GGG + chr3_1:73947840-73947859 Msa0374470:CDS 35.0%
! GTGTGATCTTTTAAATGGAG+AGG - chr3_1:73947947-73947966 None:intergenic 35.0%
TATTCGTATGACTGAACACA+GGG - chr3_1:73947997-73948016 None:intergenic 35.0%
TTATTCGTATGACTGAACAC+AGG - chr3_1:73947998-73948017 None:intergenic 35.0%
AGTGAATTGAACCAGAGAAG+AGG - chr3_1:73941200-73941219 None:intergenic 40.0%
ATATGACTTGAACGTACCTG+AGG - chr3_1:73941237-73941256 None:intergenic 40.0%
TGTCTTGGTCTATAGCCTAT+AGG + chr3_1:73942883-73942902 Msa0374470:intron 40.0%
ATTTCCAAAGCCAAAGAAGG+AGG + chr3_1:73942997-73943016 Msa0374470:CDS 40.0%
! TAATCCTCCTTCTTTGGCTT+TGG - chr3_1:73943004-73943023 None:intergenic 40.0%
GACATCTAATCCTCCTTCTT+TGG - chr3_1:73943010-73943029 None:intergenic 40.0%
TGGGACACACATGATTTAGT+GGG - chr3_1:73943204-73943223 None:intergenic 40.0%
! GTGTCTCGCCAAATTTTTGT+GGG - chr3_1:73943223-73943242 None:intergenic 40.0%
! TGTGTCTCGCCAAATTTTTG+TGG - chr3_1:73943224-73943243 None:intergenic 40.0%
CTTCTGCAGTATGAGTTTAG+TGG + chr3_1:73943379-73943398 Msa0374470:intron 40.0%
TGCAGTATGAGTTTAGTGGA+AGG + chr3_1:73943383-73943402 Msa0374470:intron 40.0%
CAATGTATGGTCCAATTCGA+AGG - chr3_1:73943462-73943481 None:intergenic 40.0%
GTGCATTCACTCTCAATGTA+TGG - chr3_1:73943475-73943494 None:intergenic 40.0%
! GCCAATCTTTTTGCTTCACA+AGG + chr3_1:73943846-73943865 Msa0374470:CDS 40.0%
ATACTTGAAAGACTGACCAC+TGG - chr3_1:73944123-73944142 None:intergenic 40.0%
GCAATGTGGGAGAAACTTTA+AGG + chr3_1:73944319-73944338 Msa0374470:CDS 40.0%
CAATTCTCTGTCCATAGTGA+AGG - chr3_1:73944365-73944384 None:intergenic 40.0%
CTTCACTATGGACAGAGAAT+TGG + chr3_1:73944363-73944382 Msa0374470:CDS 40.0%
! TCTGAAGCTGATCTCAAGTA+TGG - chr3_1:73944547-73944566 None:intergenic 40.0%
! GCCTTGTTCATAGCAAAGAA+AGG + chr3_1:73944583-73944602 Msa0374470:CDS 40.0%
! TTCGGCTAAGTTGAAAGAGA+AGG - chr3_1:73944658-73944677 None:intergenic 40.0%
ACGAATTTGATGCAGTACCA+TGG + chr3_1:73944709-73944728 Msa0374470:intron 40.0%
AATTTGATGCAGTACCATGG+AGG + chr3_1:73944712-73944731 Msa0374470:intron 40.0%
TTATTATGATGAGGCTCCAC+TGG + chr3_1:73944777-73944796 Msa0374470:CDS 40.0%
TCCACTGGATGAATATGGTA+TGG + chr3_1:73944792-73944811 Msa0374470:intron 40.0%
ACCATACCATATTCATCCAG+TGG - chr3_1:73944796-73944815 None:intergenic 40.0%
TTTGGTTGTCTAACCAAACC+TGG - chr3_1:73944890-73944909 None:intergenic 40.0%
ACCAAAATGGGGACATCTTA+AGG + chr3_1:73944904-73944923 Msa0374470:CDS 40.0%
! TCCTTAAGATGTCCCCATTT+TGG - chr3_1:73944908-73944927 None:intergenic 40.0%
TGTTCACAACCTCTACTTGA+TGG + chr3_1:73944950-73944969 Msa0374470:CDS 40.0%
! GTTTGAGTTCCATCAAGTAG+AGG - chr3_1:73944962-73944981 None:intergenic 40.0%
! AGGTCCACTATTTTCCAAGA+AGG - chr3_1:73945227-73945246 None:intergenic 40.0%
!! TCTTGGAAAATAGTGGACCT+AGG + chr3_1:73945227-73945246 Msa0374470:CDS 40.0%
!! CTTGGAAAATAGTGGACCTA+GGG + chr3_1:73945228-73945247 Msa0374470:CDS 40.0%
!! AGGATACTCATTGATTTCCC+AGG - chr3_1:73945292-73945311 None:intergenic 40.0%
!! AGTATCGGCAAAATTAGGGA+TGG - chr3_1:73945609-73945628 None:intergenic 40.0%
CAAACATTCTTTAGTGCAGC+TGG - chr3_1:73945734-73945753 None:intergenic 40.0%
!! TGTTGAATTGTTGATGGTGC+AGG + chr3_1:73945805-73945824 Msa0374470:intron 40.0%
ACATCTTTGGGCAAAAGACT+TGG + chr3_1:73945971-73945990 Msa0374470:intron 40.0%
TTAACTGTAGGTTCTGCACA+TGG + chr3_1:73946085-73946104 Msa0374470:intron 40.0%
TCCATACTTAGTGCAACAGT+GGG + chr3_1:73946175-73946194 Msa0374470:CDS 40.0%
! TTTCTAGAGACCAAAGTTGC+TGG + chr3_1:73946521-73946540 Msa0374470:CDS 40.0%
!! AGTTGCTGGTTTGAGTAAAG+TGG + chr3_1:73946535-73946554 Msa0374470:CDS 40.0%
TTGAGTAAAGTGGAAGTCCA+AGG + chr3_1:73946545-73946564 Msa0374470:CDS 40.0%
AATTCTACATCAGCATGCAG+TGG - chr3_1:73946829-73946848 None:intergenic 40.0%
GTGGATCAAGTAAAGTTCAG+TGG + chr3_1:73946900-73946919 Msa0374470:CDS 40.0%
TAAACCACTCACATGGTATC+AGG + chr3_1:73946943-73946962 Msa0374470:CDS 40.0%
ATTACCTGATACCATGTGAG+TGG - chr3_1:73946950-73946969 None:intergenic 40.0%
ACCAAGGTCTTTACGAGATT+GGG - chr3_1:73947046-73947065 None:intergenic 40.0%
AACCAAGGTCTTTACGAGAT+TGG - chr3_1:73947047-73947066 None:intergenic 40.0%
TAAGATTGGACAAGGGATGA+AGG + chr3_1:73947113-73947132 Msa0374470:intron 40.0%
!! AGTGCTTAACCTTGGTTCTA+TGG + chr3_1:73947302-73947321 Msa0374470:CDS 40.0%
!! GTGCTTAACCTTGGTTCTAT+GGG + chr3_1:73947303-73947322 Msa0374470:CDS 40.0%
!! TAACCTTGGTTCTATGGGAA+AGG + chr3_1:73947308-73947327 Msa0374470:CDS 40.0%
!! AACCTTGGTTCTATGGGAAA+GGG + chr3_1:73947309-73947328 Msa0374470:CDS 40.0%
!! CCAAGGTATTGGACGATATT+GGG + chr3_1:73947350-73947369 Msa0374470:CDS 40.0%
GTATCTTTCCACAAACCAGA+TGG + chr3_1:73947372-73947391 Msa0374470:CDS 40.0%
ATGGAACTCCTTCACAACAA+TGG + chr3_1:73947391-73947410 Msa0374470:CDS 40.0%
!! GTCGATTTTAGGAAAGAACG+TGG - chr3_1:73947839-73947858 None:intergenic 40.0%
CGTTCTTTCCTAAAATCGAC+TGG + chr3_1:73947839-73947858 Msa0374470:CDS 40.0%
! TGTCTAGAGTGATTCCTAAG+GGG - chr3_1:73947901-73947920 None:intergenic 40.0%
! GTGTCTAGAGTGATTCCTAA+GGG - chr3_1:73947902-73947921 None:intergenic 40.0%
! TGTGTCTAGAGTGATTCCTA+AGG - chr3_1:73947903-73947922 None:intergenic 40.0%
GTGAACCTGAAGCCAAATAA+TGG - chr3_1:73948044-73948063 None:intergenic 40.0%
! GCTTCAGGTTCACTCTAAAA+GGG + chr3_1:73948051-73948070 Msa0374470:intron 40.0%
TCAAAATCATGGGAGAGTGG+TGG + chr3_1:73941067-73941086 Msa0374470:exon 45.0%
TACCTACGACAGAACATCGT+TGG + chr3_1:73941152-73941171 Msa0374470:CDS 45.0%
AAAAAGAGAGGCAGAGACGA+GGG + chr3_1:73941483-73941502 Msa0374470:intron 45.0%
!! TAGTTTTGCCAAGACGGCAA+AGG - chr3_1:73942432-73942451 None:intergenic 45.0%
TGCCGTCTTGGCAAAACTAA+TGG + chr3_1:73942433-73942452 Msa0374470:intron 45.0%
ATGTTTGACGATAGAGTGGG+TGG + chr3_1:73942587-73942606 Msa0374470:intron 45.0%
AATCTTCACGAGCCTCAACA+AGG + chr3_1:73943051-73943070 Msa0374470:CDS 45.0%
TATGCACCAATGAGGTTACC+TGG - chr3_1:73943077-73943096 None:intergenic 45.0%
GTGGGACACACATGATTTAG+TGG - chr3_1:73943205-73943224 None:intergenic 45.0%
AGGACCTATCATACTATCCC+AGG + chr3_1:73943869-73943888 Msa0374470:CDS 45.0%
! ATGGGTTGCCCTATATTCGT+TGG + chr3_1:73944025-73944044 Msa0374470:CDS 45.0%
TGGGTTGCCCTATATTCGTT+GGG + chr3_1:73944026-73944045 Msa0374470:CDS 45.0%
ATGCAGATCAACGCATGCAA+TGG + chr3_1:73944293-73944312 Msa0374470:intron 45.0%
CATGCAATGGCATGCAATGT+GGG + chr3_1:73944306-73944325 Msa0374470:CDS 45.0%
!! GAAGGCTTGTTAGGAGAGTT+TGG - chr3_1:73944347-73944366 None:intergenic 45.0%
CTCCTAACAAGCCTTCACTA+TGG + chr3_1:73944351-73944370 Msa0374470:CDS 45.0%
! GTCCATAGTGAAGGCTTGTT+AGG - chr3_1:73944356-73944375 None:intergenic 45.0%
! GGCTAAGTTGAAAGAGAAGG+AGG - chr3_1:73944655-73944674 None:intergenic 45.0%
CACAGTCAGTCACGTAACAA+TGG - chr3_1:73944858-73944877 None:intergenic 45.0%
TTACGTGACTGACTGTGCTA+AGG + chr3_1:73944861-73944880 Msa0374470:intron 45.0%
TGTGCTAAGGTAACCAGGTT+TGG + chr3_1:73944874-73944893 Msa0374470:intron 45.0%
ACTCAAACCACCTTCAGCTT+AGG + chr3_1:73944974-73944993 Msa0374470:CDS 45.0%
GCTGCCTTCTTGGAAAATAG+TGG + chr3_1:73945220-73945239 Msa0374470:CDS 45.0%
AAGACTACATTCTTGCAGCC+TGG - chr3_1:73945316-73945335 None:intergenic 45.0%
CTCCATACTTAGTGCAACAG+TGG + chr3_1:73946174-73946193 Msa0374470:CDS 45.0%
TCCCACTGTTGCACTAAGTA+TGG - chr3_1:73946179-73946198 None:intergenic 45.0%
GCTCTACTAAACCACTCACA+TGG + chr3_1:73946936-73946955 Msa0374470:CDS 45.0%
AGGTCTTTACGAGATTGGGT+TGG - chr3_1:73947042-73947061 None:intergenic 45.0%
ACCCAATCTCGTAAAGACCT+TGG + chr3_1:73947042-73947061 Msa0374470:intron 45.0%
GATCCTGTAGTGCTTAACCT+TGG + chr3_1:73947294-73947313 Msa0374470:CDS 45.0%
GAACCAAGGTTAAGCACTAC+AGG - chr3_1:73947300-73947319 None:intergenic 45.0%
! TATGGGAAAGGGACTTGCTT+GGG + chr3_1:73947320-73947339 Msa0374470:CDS 45.0%
! AAGGGACTTGCTTGGGTTAA+TGG + chr3_1:73947327-73947346 Msa0374470:CDS 45.0%
TGGGTTAATGGCCAAGGTAT+TGG + chr3_1:73947339-73947358 Msa0374470:CDS 45.0%
!! GCCAAGGTATTGGACGATAT+TGG + chr3_1:73947349-73947368 Msa0374470:CDS 45.0%
CCCAATATCGTCCAATACCT+TGG - chr3_1:73947353-73947372 None:intergenic 45.0%
! AAGGAGTTCCATCTGGTTTG+TGG - chr3_1:73947383-73947402 None:intergenic 45.0%
TGTTGTGAAGGAGTTCCATC+TGG - chr3_1:73947390-73947409 None:intergenic 45.0%
!! GTAGGTTCCCAGTCGATTTT+AGG - chr3_1:73947850-73947869 None:intergenic 45.0%
! GGCTTCAGGTTCACTCTAAA+AGG + chr3_1:73948050-73948069 Msa0374470:intron 45.0%
TCTTACAAGCAAAGAGCCAC+CGG + chr3_1:73948078-73948097 Msa0374470:CDS 45.0%
!!! TATTTAATTATTTTTTTTAC+TGG + chr3_1:73942406-73942425 Msa0374470:intron 5.0%
GGTAACATTGCCACCATGGA+CGG - chr3_1:73941136-73941155 None:intergenic 50.0%
CGTAGGTAACATTGCCACCA+TGG - chr3_1:73941140-73941159 None:intergenic 50.0%
GACCAACGATGTTCTGTCGT+AGG - chr3_1:73941157-73941176 None:intergenic 50.0%
GAAAAAGAGAGGCAGAGACG+AGG + chr3_1:73941482-73941501 Msa0374470:intron 50.0%
! TCATTGATGGCAACTGCCAG+TGG + chr3_1:73942091-73942110 Msa0374470:intron 50.0%
GTACACACAAGTGATGCCAC+TGG - chr3_1:73942110-73942129 None:intergenic 50.0%
!! TTTACTGGCCTTTGCCGTCT+TGG + chr3_1:73942421-73942440 Msa0374470:intron 50.0%
ACAAGGCCAGGTAACCTCAT+TGG + chr3_1:73943068-73943087 Msa0374470:intron 50.0%
GCTGTAGGGGTCTACCATTA+TGG + chr3_1:73943627-73943646 Msa0374470:intron 50.0%
TGGGCAGCCCAACGAATATA+GGG - chr3_1:73944036-73944055 None:intergenic 50.0%
TTGGGCAGCCCAACGAATAT+AGG - chr3_1:73944037-73944056 None:intergenic 50.0%
TATTCGTTGGGCTGCCCAAA+TGG + chr3_1:73944038-73944057 Msa0374470:CDS 50.0%
TTGAAGTCCCACGGCCATTT+GGG - chr3_1:73944055-73944074 None:intergenic 50.0%
! TTTGAAGTCCCACGGCCATT+TGG - chr3_1:73944056-73944075 None:intergenic 50.0%
ACACATCATCCAAGGCACAC+CGG - chr3_1:73944079-73944098 None:intergenic 50.0%
AGATGATGCTCCTGATCCAG+TGG + chr3_1:73944104-73944123 Msa0374470:CDS 50.0%
GAAAGACTGACCACTGGATC+AGG - chr3_1:73944117-73944136 None:intergenic 50.0%
GCATGCAATGGCATGCAATG+TGG + chr3_1:73944305-73944324 Msa0374470:CDS 50.0%
GAGGCTCCACTGGATGAATA+TGG + chr3_1:73944787-73944806 Msa0374470:CDS 50.0%
CTGACTGTGCTAAGGTAACC+AGG + chr3_1:73944869-73944888 Msa0374470:intron 50.0%
CAAGAAGGCAGCACATTCTG+TGG - chr3_1:73945212-73945231 None:intergenic 50.0%
CACAGAATGTGCTGCCTTCT+TGG + chr3_1:73945210-73945229 Msa0374470:CDS 50.0%
CTACATTCTTGCAGCCTGGT+AGG - chr3_1:73945312-73945331 None:intergenic 50.0%
TGTAGTCTTCAACACCGGCA+AGG + chr3_1:73945327-73945346 Msa0374470:CDS 50.0%
TAGTGCAACAGTGGGATTGC+CGG + chr3_1:73946183-73946202 Msa0374470:CDS 50.0%
ACTACAGGATCATTGCCAGC+TGG - chr3_1:73947285-73947304 None:intergenic 50.0%
GTCCCTTTCCCATAGAACCA+AGG - chr3_1:73947314-73947333 None:intergenic 50.0%
! CTATGGGAAAGGGACTTGCT+TGG + chr3_1:73947319-73947338 Msa0374470:CDS 50.0%
CTTGCTTGGGTTAATGGCCA+AGG + chr3_1:73947333-73947352 Msa0374470:CDS 50.0%
AGTGATTCCTAAGGGGTTCC+CGG - chr3_1:73947894-73947913 None:intergenic 50.0%
GTGTCTCTTTGCACCGTCCA+TGG + chr3_1:73941120-73941139 Msa0374470:CDS 55.0%
TCTCTTTGCACCGTCCATGG+TGG + chr3_1:73941123-73941142 Msa0374470:CDS 55.0%
CTATCCTCGTAGCACTCCTC+AGG + chr3_1:73941218-73941237 Msa0374470:CDS 55.0%
!! GAGGTTACCTGGCCTTGTTG+AGG - chr3_1:73943066-73943085 None:intergenic 55.0%
ATGGCCGTGGGACTTCAAAC+CGG + chr3_1:73944057-73944076 Msa0374470:CDS 55.0%
!! CACACCGGTTTGAAGTCCCA+CGG - chr3_1:73944064-73944083 None:intergenic 55.0%
GACTTCAAACCGGTGTGCCT+TGG + chr3_1:73944067-73944086 Msa0374470:CDS 55.0%
CTGTGAGCCTAAGCTGAAGG+TGG - chr3_1:73944984-73945003 None:intergenic 55.0%
ACCACATTCGATGCACCAGC+TGG + chr3_1:73947267-73947286 Msa0374470:CDS 55.0%
GAAGAAACCGGGAACCCCTT+AGG + chr3_1:73947884-73947903 Msa0374470:CDS 55.0%
!! CGTACCTGAGGAGTGCTACG+AGG - chr3_1:73941225-73941244 None:intergenic 60.0%
AAGAGAGGCAGAGACGAGGG+AGG + chr3_1:73941486-73941505 Msa0374470:intron 60.0%
AGAGAGGCAGAGACGAGGGA+GGG + chr3_1:73941487-73941506 Msa0374470:intron 60.0%
TCACGAGCCTCAACAAGGCC+AGG + chr3_1:73943056-73943075 Msa0374470:CDS 60.0%
GCCAGCTGGTGCATCGAATG+TGG - chr3_1:73947271-73947290 None:intergenic 60.0%
TTGGGCTGCCCAAATGGCCG+TGG + chr3_1:73944044-73944063 Msa0374470:CDS 65.0%
TGGGCTGCCCAAATGGCCGT+GGG + chr3_1:73944045-73944064 Msa0374470:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 73941004 73948105 73941004 ID=Msa0374470;Name=Msa0374470
chr3_1 mRNA 73941004 73948105 73941004 ID=Msa0374470-mRNA-1;Parent=Msa0374470;Name=Msa0374470-mRNA-1;_AED=0.06;_eAED=0.06;_QI=71|0.38|0.31|1|1|1|19|0|704
chr3_1 exon 73941004 73941239 73941004 ID=Msa0374470-mRNA-1:exon:16895;Parent=Msa0374470-mRNA-1
chr3_1 exon 73942982 73943077 73942982 ID=Msa0374470-mRNA-1:exon:16896;Parent=Msa0374470-mRNA-1
chr3_1 exon 73943388 73943500 73943388 ID=Msa0374470-mRNA-1:exon:16897;Parent=Msa0374470-mRNA-1
chr3_1 exon 73943634 73943700 73943634 ID=Msa0374470-mRNA-1:exon:16898;Parent=Msa0374470-mRNA-1
chr3_1 exon 73943798 73943890 73943798 ID=Msa0374470-mRNA-1:exon:16899;Parent=Msa0374470-mRNA-1
chr3_1 exon 73943982 73944125 73943982 ID=Msa0374470-mRNA-1:exon:16900;Parent=Msa0374470-mRNA-1
chr3_1 exon 73944299 73944393 73944299 ID=Msa0374470-mRNA-1:exon:16901;Parent=Msa0374470-mRNA-1
chr3_1 exon 73944522 73944627 73944522 ID=Msa0374470-mRNA-1:exon:16902;Parent=Msa0374470-mRNA-1
chr3_1 exon 73944724 73944808 73944724 ID=Msa0374470-mRNA-1:exon:16903;Parent=Msa0374470-mRNA-1
chr3_1 exon 73944891 73945009 73944891 ID=Msa0374470-mRNA-1:exon:16904;Parent=Msa0374470-mRNA-1
chr3_1 exon 73945190 73945348 73945190 ID=Msa0374470-mRNA-1:exon:16905;Parent=Msa0374470-mRNA-1
chr3_1 exon 73945524 73945705 73945524 ID=Msa0374470-mRNA-1:exon:16906;Parent=Msa0374470-mRNA-1
chr3_1 exon 73945827 73945918 73945827 ID=Msa0374470-mRNA-1:exon:16907;Parent=Msa0374470-mRNA-1
chr3_1 exon 73946095 73946204 73946095 ID=Msa0374470-mRNA-1:exon:16908;Parent=Msa0374470-mRNA-1
chr3_1 exon 73946509 73946601 73946509 ID=Msa0374470-mRNA-1:exon:16909;Parent=Msa0374470-mRNA-1
chr3_1 exon 73946860 73946964 73946860 ID=Msa0374470-mRNA-1:exon:16910;Parent=Msa0374470-mRNA-1
chr3_1 exon 73947267 73947412 73947267 ID=Msa0374470-mRNA-1:exon:16911;Parent=Msa0374470-mRNA-1
chr3_1 exon 73947826 73947922 73947826 ID=Msa0374470-mRNA-1:exon:16912;Parent=Msa0374470-mRNA-1
chr3_1 exon 73948058 73948105 73948058 ID=Msa0374470-mRNA-1:exon:16913;Parent=Msa0374470-mRNA-1
chr3_1 five_prime_UTR 73941004 73941074 73941004 ID=Msa0374470-mRNA-1:five_prime_utr;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73941075 73941239 73941075 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73942982 73943077 73942982 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73943388 73943500 73943388 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73943634 73943700 73943634 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73943798 73943890 73943798 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73943982 73944125 73943982 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73944299 73944393 73944299 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73944522 73944627 73944522 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73944724 73944808 73944724 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73944891 73945009 73944891 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73945190 73945348 73945190 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73945524 73945705 73945524 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73945827 73945918 73945827 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73946095 73946204 73946095 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73946509 73946601 73946509 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73946860 73946964 73946860 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73947267 73947412 73947267 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73947826 73947922 73947826 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
chr3_1 CDS 73948058 73948105 73948058 ID=Msa0374470-mRNA-1:cds;Parent=Msa0374470-mRNA-1
Gene Sequence

>Msa0374470

ATGGGAGAGTGGTGGCGTTTTTTATTACATGCACTTATTTTAACAGTGTCTCTTTGCACCGTCCATGGTGGCAATGTTACCTACGACAGAACATCGTTGGTCATTAACGGCCATCATAAAATCCTCTTCTCTGGTTCAATTCACTATCCTCGTAGCACTCCTCAGATGTGGCCTGACTTAATTTCCAAAGCCAAAGAAGGAGGATTAGATGTCATACAAACTTACGTGTTTTGGAATCTTCACGAGCCTCAACAAGGCCAGTATGAGTTTAGTGGAAGGTTTGATTTAGTGGGATTCATTAAAGAAATTCAAGCTCAAGGTTTATATGTGACCCTTCGAATTGGACCATACATTGAGAGTGAATGCACTTATGGGGGTCTACCATTATGGTTACATGATGTTCCTGGAATTGTATTTAGAAGTGATAATGATCAATTCAAGTTTCACATGCAAAGATTCACTACCAAAATAGTCAACATGATGAAATCAGCCAATCTTTTTGCTTCACAAGGAGGACCTATCATACTATCCCAGATTGAGAATGAATATGGCAGCATTCAAAGTAAGTTTCGAGAGAATGGGTTGCCCTATATTCGTTGGGCTGCCCAAATGGCCGTGGGACTTCAAACCGGTGTGCCTTGGATGATGTGTAAACAAGATGATGCTCCTGATCCAGTGATCAACGCATGCAATGGCATGCAATGTGGGAGAAACTTTAAGGGGCCAAACTCTCCTAACAAGCCTTCACTATGGACAGAGAATTGGACTAGCTTTTTACAAGCTTTTGGTGGAGCACCATACTTGAGATCAGCTTCAGACATTGCCTATAATGTTGCCTTGTTCATAGCAAAGAAAGGAAGTTATGTCAATTATTACATGTACCATGGAGGAACTAATTTTGATAGATTGGCCTCTGCTTTCATAATAACAGCTTATTATGATGAGGCTCCACTGGATGAATATGGTTTGGTTAGACAACCAAAATGGGGACATCTTAAGGAGCTACATGCTGCAATCAAGTCATGTTCACAACCTCTACTTGATGGAACTCAAACCACCTTCAGCTTAGGCTCACAGCAACAAGCTTATGTTTTCAGAAGTTCCACAGAATGTGCTGCCTTCTTGGAAAATAGTGGACCTAGGGATGTAACAATCCAATTTCAAAATATTTCGTATGAATTGCCTGGGAAATCAATGAGTATCCTACCAGGCTGCAAGAATGTAGTCTTCAACACCGGCAAGGTGAGTATACAGAATAATGCCAGAGCAATGAAACCACAATTAAAGTTCAATTCAGCTGAAAATTGGAAAGTGTATACAGAAGCCATCCCTAATTTTGCCGATACTTCAAAAAGAGCAGACACATTATTAGATCAAATCAGCACAGCAAAAGATACATCTGACTATATGTGGTACACTTTCAGGTTTAATAACAAATCTCCTAATGCACAATCTGTTCTTAGTATATACAGTCAAGGACATGTTTTGCATTCTTTCGTCAATGGAGTTTTAACAGGTTCTGCACATGGAAGTCGCAACAATACGCAAGTTACAATGGAGAAAAATGTCAATCTGATAAACGGGATGAACAACATCTCCATACTTAGTGCAACAGTGGGATTGCCGAACTCGGGAGCATTTCTAGAGACCAAAGTTGCTGGTTTGAGTAAAGTGGAAGTCCAAGGAAGAGATTTCAGTAATTACTCATGGGGATATCAGGTTGGGTTGTTAGGAGAAAAATTGCAAATCTATTCAGTCAGTGGATCAAGTAAAGTTCAGTGGAAAAGTTTTCAAAGCTCTACTAAACCACTCACATGGTATCAGACCACATTCGATGCACCAGCTGGCAATGATCCTGTAGTGCTTAACCTTGGTTCTATGGGAAAGGGACTTGCTTGGGTTAATGGCCAAGGTATTGGACGATATTGGGTATCTTTCCACAAACCAGATGGAACTCCTTCACAACAATGGTATCACATACCACGTTCTTTCCTAAAATCGACTGGGAACCTACTTGTTATACTTGAAGAAGAAACCGGGAACCCCTTAGGAATCACTCTAGACACAGTTCACTCTAAAAGGGTTTATCTTACAAGCAAAGAGCCACCGGTATAG
Protein sequence

>Msa0374470

MGEWWRFLLHALILTVSLCTVHGGNVTYDRTSLVINGHHKILFSGSIHYPRSTPQMWPDLISKAKEGGLDVIQTYVFWNLHEPQQGQYEFSGRFDLVGFIKEIQAQGLYVTLRIGPYIESECTYGGLPLWLHDVPGIVFRSDNDQFKFHMQRFTTKIVNMMKSANLFASQGGPIILSQIENEYGSIQSKFRENGLPYIRWAAQMAVGLQTGVPWMMCKQDDAPDPVINACNGMQCGRNFKGPNSPNKPSLWTENWTSFLQAFGGAPYLRSASDIAYNVALFIAKKGSYVNYYMYHGGTNFDRLASAFIITAYYDEAPLDEYGLVRQPKWGHLKELHAAIKSCSQPLLDGTQTTFSLGSQQQAYVFRSSTECAAFLENSGPRDVTIQFQNISYELPGKSMSILPGCKNVVFNTGKVSIQNNARAMKPQLKFNSAENWKVYTEAIPNFADTSKRADTLLDQISTAKDTSDYMWYTFRFNNKSPNAQSVLSIYSQGHVLHSFVNGVLTGSAHGSRNNTQVTMEKNVNLINGMNNISILSATVGLPNSGAFLETKVAGLSKVEVQGRDFSNYSWGYQVGLLGEKLQIYSVSGSSKVQWKSFQSSTKPLTWYQTTFDAPAGNDPVVLNLGSMGKGLAWVNGQGIGRYWVSFHKPDGTPSQQWYHIPRSFLKSTGNLLVILEEETGNPLGITLDTVHSKRVYLTSKEPPV*