AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0374600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0374600 MtrunA17_Chr3g0124931 96.104 693 27 0 1 693 1 693 0.0 1398
Msa0374600 MtrunA17_Chr3g0130721 61.000 700 261 5 3 690 2 701 0.0 884
Msa0374600 MtrunA17_Chr3g0145581 48.184 716 350 7 7 702 9 723 0.0 706
Msa0374600 MtrunA17_Chr4g0037031 47.949 707 351 6 13 703 23 728 0.0 696
Msa0374600 MtrunA17_Chr2g0299161 51.247 722 304 15 6 687 9 722 0.0 692
Msa0374600 MtrunA17_Chr8g0342001 50.208 721 311 11 8 687 7 720 0.0 691
Msa0374600 MtrunA17_Chr2g0330291 51.195 711 298 12 18 687 21 723 0.0 683
Msa0374600 MtrunA17_Chr1g0152571 51.631 705 293 16 24 687 29 726 0.0 683
Msa0374600 MtrunA17_Chr1g0155701 49.224 709 315 13 26 694 29 732 0.0 669
Msa0374600 MtrunA17_Chr8g0372421 49.586 724 315 17 5 687 9 723 0.0 668
Msa0374600 MtrunA17_Chr3g0142001 50.211 711 301 14 26 692 28 729 0.0 668
Msa0374600 MtrunA17_Chr2g0326481 48.295 733 332 12 12 703 8 734 0.0 667
Msa0374600 MtrunA17_Chr5g0404841 49.725 726 308 15 6 687 8 720 0.0 666
Msa0374600 MtrunA17_Chr4g0029301 47.619 735 334 12 11 703 15 740 0.0 659
Msa0374600 MtrunA17_Chr3g0130711 47.390 728 334 12 7 687 5 730 0.0 628
Msa0374600 MtrunA17_Chr2g0301001 44.033 729 361 13 7 690 8 734 0.0 592
Msa0374600 MtrunA17_Chr8g0378221 43.860 741 338 15 25 695 49 781 0.0 590
Msa0374600 MtrunA17_Chr5g0406921 44.837 707 345 14 26 690 28 731 0.0 575
Msa0374600 MtrunA17_Chr5g0408371 45.084 712 343 16 26 695 28 733 0.0 570
Msa0374600 MtrunA17_Chr3g0077531 43.644 708 352 12 11 677 15 716 0.0 562
Msa0374600 MtrunA17_Chr2g0326491 49.035 518 212 6 11 478 7 522 9.07e-169 494
Msa0374600 MtrunA17_Chr2g0326441 59.011 283 114 1 11 293 7 287 2.26e-118 357
Msa0374600 MtrunA17_Chr2g0326451 39.813 427 205 11 323 703 25 445 7.76e-82 270
Msa0374600 MtrunA17_Chr5g0405781 41.743 218 100 2 145 362 21 211 5.98e-49 175
Msa0374600 MtrunA17_Chr4g0071281 44.571 175 89 3 476 642 10 184 6.02e-33 127
Msa0374600 MtrunA17_Chr2g0307981 31.746 252 152 6 453 690 59 304 6.16e-30 120
Msa0374600 MtrunA17_Chr4g0071291 36.970 165 63 3 25 186 21 147 1.09e-25 103
Msa0374600 MtrunA17_Chr8g0372581 41.135 141 62 3 147 287 9 128 5.77e-24 98.2
Msa0374600 MtrunA17_Chr2g0326521 33.333 234 96 8 504 703 1 208 2.39e-23 101
Msa0374600 MtrunA17_Chr2g0330191 29.254 335 195 9 42 345 70 393 3.07e-23 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0374600 AT1G77410.1 61.925 696 254 7 10 695 6 700 0.0 905
Msa0374600 AT1G77410.3 61.484 701 254 8 10 695 6 705 0.0 900
Msa0374600 AT5G63800.1 59.019 693 275 3 7 690 13 705 0.0 863
Msa0374600 AT1G77410.2 61.698 577 213 6 126 695 19 594 0.0 746
Msa0374600 AT1G77410.4 61.698 577 213 6 126 695 19 594 0.0 746
Msa0374600 AT3G13750.1 51.662 722 295 12 7 687 21 729 0.0 701
Msa0374600 AT4G26140.1 49.791 717 319 12 7 687 11 722 0.0 694
Msa0374600 AT4G35010.1 50.000 668 317 7 26 678 41 706 0.0 687
Msa0374600 AT3G52840.2 48.886 718 324 11 7 687 64 775 0.0 686
Msa0374600 AT3G52840.1 48.886 718 324 11 7 687 10 721 0.0 685
Msa0374600 AT4G26140.7 48.113 742 319 13 7 687 11 747 0.0 680
Msa0374600 AT2G16730.1 48.806 670 322 7 26 678 44 709 0.0 679
Msa0374600 AT5G56870.1 49.033 724 311 14 8 687 11 720 0.0 672
Msa0374600 AT4G36360.1 48.963 723 316 14 7 687 17 728 0.0 671
Msa0374600 AT4G36360.2 48.963 723 316 14 7 687 17 728 0.0 671
Msa0374600 AT2G28470.1 48.427 731 322 15 23 704 29 753 0.0 659
Msa0374600 AT2G28470.3 48.427 731 322 15 23 704 29 753 0.0 659
Msa0374600 AT1G45130.1 48.536 717 317 13 7 681 14 720 0.0 657
Msa0374600 AT2G28470.2 48.427 731 322 15 23 704 23 747 0.0 657
Msa0374600 AT2G28470.4 48.427 731 322 15 23 704 23 747 0.0 657
Msa0374600 AT4G26140.9 49.192 681 300 12 7 646 11 686 0.0 647
Msa0374600 AT5G63810.1 45.706 722 348 10 8 687 14 733 0.0 636
Msa0374600 AT4G38590.1 47.913 647 313 10 56 683 1 642 0.0 629
Msa0374600 AT2G28470.5 50.779 642 287 12 25 643 31 666 0.0 628
Msa0374600 AT4G38590.2 45.262 707 352 12 6 683 6 706 0.0 627
Msa0374600 AT2G32810.1 45.286 753 339 15 5 690 12 758 0.0 620
Msa0374600 AT2G32810.2 45.286 753 339 15 5 690 12 758 0.0 620
Msa0374600 AT4G26140.6 50.971 618 282 11 7 608 11 623 0.0 610
Msa0374600 AT4G26140.3 50.971 618 280 11 7 608 11 621 0.0 607
Msa0374600 AT4G26140.2 50.971 618 280 11 7 608 11 621 0.0 607
Msa0374600 AT5G20710.1 41.997 731 381 11 1 690 3 731 0.0 584
Msa0374600 AT1G31740.1 44.789 710 336 17 7 690 6 685 0.0 575
Msa0374600 AT4G26140.8 53.028 545 243 8 8 544 12 551 0.0 568
Msa0374600 AT1G45130.2 46.939 637 288 12 87 681 13 641 0.0 555
Msa0374600 AT4G26140.4 50.702 570 243 9 8 544 12 576 0.0 555
Msa0374600 AT4G26140.5 50.702 570 243 9 8 544 12 576 0.0 555
Msa0374600 AT5G20710.2 36.364 528 293 11 204 690 1 526 6.88e-110 346
Msa0374600 AT2G04060.1 32.213 357 172 8 293 643 23 315 2.29e-42 160
Msa0374600 AT2G04062.1 40.462 173 82 2 26 198 7 158 1.65e-38 140
Msa0374600 AT1G72990.3 28.967 397 238 9 36 402 18 400 2.37e-32 133
Msa0374600 AT1G72990.1 28.967 397 238 9 36 402 73 455 3.41e-32 133
Msa0374600 AT1G72990.4 28.967 397 238 9 36 402 73 455 3.41e-32 133
Msa0374600 AT1G72990.2 28.756 386 231 9 47 402 22 393 5.65e-29 123

Find 181 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAAGTATCGGCAAAATT+AGG 0.136464 3_1:-74057168 None:intergenic
CACAGAATGTGCTGCCTTCT+TGG 0.153848 3_1:+74056767 Msa0374600:CDS
GGCTTCAGGTTCACTCTAAA+AGG 0.155139 3_1:+74059607 Msa0374600:intron
TTTCATCATGTTGACTATTT+TGG 0.164006 3_1:-74055377 None:intergenic
AAGGGACTTGCTTGGGTTAA+TGG 0.191945 3_1:+74058884 Msa0374600:CDS
GCAATGTGGGAGAAACTTTA+AGG 0.207416 3_1:+74055876 Msa0374600:CDS
ACTATATGTGGTACACTTTC+AGG 0.210126 3_1:+74057241 Msa0374600:CDS
TCATACAAACTTACGTGTTT+TGG 0.226139 3_1:+74054585 Msa0374600:CDS
AGTTCAATTCAGCTGAAAAT+TGG 0.226601 3_1:+74057124 Msa0374600:CDS
TCCTTAAGATGTCCCCATTT+TGG 0.231023 3_1:-74056462 None:intergenic
AGTGCTTAACCTTGGTTCTA+TGG 0.238870 3_1:+74058859 Msa0374600:CDS
GCCAAGGTATTGGACGATAT+TGG 0.257316 3_1:+74058906 Msa0374600:CDS
GACATCTAATCCTCCTTCTT+TGG 0.263463 3_1:-74054564 None:intergenic
TTTGAAGTCCCACGGCCATT+TGG 0.264333 3_1:-74055610 None:intergenic
GTTTGGTTAGACAACCAAAA+TGG 0.279707 3_1:+74056448 Msa0374600:CDS
TAATCCTCCTTCTTTGGCTT+TGG 0.297718 3_1:-74054558 None:intergenic
TAAATGAAGGTTGGGTTGTT+AGG 0.307229 3_1:+74058408 Msa0374600:intron
TATGAACAAGGCAACATTAT+AGG 0.308128 3_1:-74056129 None:intergenic
ATTAATAGTTTACAAGCTTT+TGG 0.309185 3_1:+74056071 Msa0374600:intron
ATTGAGAGTGAATGCACTTA+TGG 0.315012 3_1:+74055035 Msa0374600:CDS
TTGAAGTCCCACGGCCATTT+GGG 0.331347 3_1:-74055609 None:intergenic
TCCCACTGTTGCACTAAGTA+TGG 0.332189 3_1:-74057733 None:intergenic
CTAAGAACAGATTGTGCATT+AGG 0.335456 3_1:-74057400 None:intergenic
TTGAAGTATCGGCAAAATTA+GGG 0.337323 3_1:-74057167 None:intergenic
GAAGGCTTGTTAGGAGAGTT+TGG 0.344500 3_1:-74055901 None:intergenic
TTGGGCAGCCCAACGAATAT+AGG 0.344539 3_1:-74055591 None:intergenic
ACCAAAATGGGGACATCTTA+AGG 0.354053 3_1:+74056461 Msa0374600:CDS
CAAAGTAAGTTTCGAGAGAA+TGG 0.355862 3_1:+74055563 Msa0374600:CDS
TAATTACTCATGGGGATATC+AGG 0.358295 3_1:+74058137 Msa0374600:CDS
TGGGTTAATGGCCAAGGTAT+TGG 0.361101 3_1:+74058896 Msa0374600:CDS
AGTGATTCCTAAGGGGTTCC+CGG 0.372281 3_1:-74059448 None:intergenic
TCACTTCTAAATACAATTCC+AGG 0.376793 3_1:-74055219 None:intergenic
GTTATACTTGAAGAAGAAAC+CGG 0.376857 3_1:+74059429 Msa0374600:CDS
CTATGGGAAAGGGACTTGCT+TGG 0.378634 3_1:+74058876 Msa0374600:CDS
TAATTGTGGTTTCATTGCTC+TGG 0.381958 3_1:-74057100 None:intergenic
GCTGTAGGGGTCTACCATTA+TGG 0.382065 3_1:+74055184 Msa0374600:intron
TAAACCACTCACATGGTATC+AGG 0.384274 3_1:+74058500 Msa0374600:CDS
CCAAGGTATTGGACGATATT+GGG 0.385483 3_1:+74058907 Msa0374600:CDS
AATATTTCGTATGAATTGCC+TGG 0.387602 3_1:+74056828 Msa0374600:CDS
TGTTGGTGAAATCAAAATCA+TGG 0.389952 3_1:+74052613 Msa0374600:exon
ATGTAGATTGAGAATGAATA+TGG 0.390011 3_1:+74055533 Msa0374600:intron
TAGTGGAAGGTTTGATTTAG+TGG 0.394049 3_1:+74054953 Msa0374600:CDS
TGTTCACAACCTCTACTTGA+TGG 0.396063 3_1:+74056507 Msa0374600:CDS
CTTCTGCAGTATGAGTTTAG+TGG 0.397314 3_1:+74054936 Msa0374600:intron
TATTCGTTGGGCTGCCCAAA+TGG 0.400359 3_1:+74055595 Msa0374600:CDS
GTCCATAGTGAAGGCTTGTT+AGG 0.404534 3_1:-74055910 None:intergenic
TTATATGTGACCCTTCGAAT+TGG 0.404622 3_1:+74055005 Msa0374600:CDS
AATTACTGAAATCTCTTCCT+TGG 0.408801 3_1:-74058119 None:intergenic
TATGGGAAAGGGACTTGCTT+GGG 0.409955 3_1:+74058877 Msa0374600:CDS
TTTGGTTAGACAACCAAAAT+GGG 0.416446 3_1:+74056449 Msa0374600:CDS
CTTCACTATGGACAGAGAAT+TGG 0.420589 3_1:+74055920 Msa0374600:CDS
TGGGCAGCCCAACGAATATA+GGG 0.423176 3_1:-74055590 None:intergenic
TTTACTCAAACCAGCAACTT+TGG 0.427160 3_1:-74058088 None:intergenic
TTATGGTTACATGATGTTCC+TGG 0.429910 3_1:+74055201 Msa0374600:CDS
GAAAGACTGACCACTGGATC+AGG 0.433772 3_1:-74055671 None:intergenic
AAAATGTCAATCTGATAAAC+GGG 0.436199 3_1:+74057697 Msa0374600:CDS
TTTCTAGAGACCAAAGTTGC+TGG 0.437416 3_1:+74058078 Msa0374600:CDS
TAGTGCAACAGTGGGATTGC+CGG 0.437529 3_1:+74057740 Msa0374600:CDS
TTGAGAGTGAATGCACTTAT+GGG 0.439807 3_1:+74055036 Msa0374600:CDS
CTCCTAACAAGCCTTCACTA+TGG 0.444788 3_1:+74055908 Msa0374600:CDS
TTGGGCTGCCCAAATGGCCG+TGG 0.445681 3_1:+74055601 Msa0374600:CDS
GAGGCTCCACTGGATGAATA+TGG 0.446906 3_1:+74056344 Msa0374600:CDS
AATTGGATTGTTACATCCCT+AGG 0.447987 3_1:-74056801 None:intergenic
TAAACCTGGGATAGTATGAT+AGG 0.451854 3_1:-74055430 None:intergenic
TGTTGTGAAGGAGTTCCATC+TGG 0.453218 3_1:-74058944 None:intergenic
TGGGTTGCCCTATATTCGTT+GGG 0.460338 3_1:+74055583 Msa0374600:CDS
CATCATAAAATCCTCTTCTC+TGG 0.461766 3_1:+74052743 Msa0374600:CDS
GGAACATCATGTAACCATAA+TGG 0.461861 3_1:-74055198 None:intergenic
AGTATTTCCTTTAGCTATAC+CGG 0.464149 3_1:-74059654 None:intergenic
CGTTCTTTCCTAAAATCGAC+TGG 0.470629 3_1:+74059396 Msa0374600:CDS
TCTGAAGCTGATCTCAAGTA+TGG 0.472062 3_1:-74056101 None:intergenic
AAAGTAAGTTTCGAGAGAAT+GGG 0.472636 3_1:+74055564 Msa0374600:CDS
ATGGGTTGCCCTATATTCGT+TGG 0.474004 3_1:+74055582 Msa0374600:CDS
GAAGAAACCGGGAACCCCTT+AGG 0.474106 3_1:+74059441 Msa0374600:CDS
TTAATTTCCAAAGCCAAAGA+AGG 0.474275 3_1:+74054551 Msa0374600:CDS
GTGCTTAACCTTGGTTCTAT+GGG 0.476524 3_1:+74058860 Msa0374600:CDS
GACTTCAAACCGGTGTGCCT+TGG 0.476862 3_1:+74055624 Msa0374600:CDS
GTGCATTCACTCTCAATGTA+TGG 0.478471 3_1:-74055029 None:intergenic
TTGGCTTTGGAAATTAAGTC+AGG 0.481878 3_1:-74054545 None:intergenic
CTTCTTCAAGTATAACAAGT+AGG 0.483081 3_1:-74059422 None:intergenic
GCTTCAGGTTCACTCTAAAA+GGG 0.485002 3_1:+74059608 Msa0374600:intron
AGAACATCGTTGGTCATTAA+CGG 0.485783 3_1:+74052719 Msa0374600:CDS
CCCAATATCGTCCAATACCT+TGG 0.486272 3_1:-74058907 None:intergenic
GTTGGTGAAATCAAAATCAT+GGG 0.486532 3_1:+74052614 Msa0374600:exon
AAGGAGTTCCATCTGGTTTG+TGG 0.487600 3_1:-74058937 None:intergenic
CAATGTGGGAGAAACTTTAA+GGG 0.489483 3_1:+74055877 Msa0374600:CDS
AACCTTGGTTCTATGGGAAA+GGG 0.490035 3_1:+74058866 Msa0374600:CDS
GAGATTTCAGTAATTACTCA+TGG 0.494226 3_1:+74058127 Msa0374600:CDS
TAACCTTGGTTCTATGGGAA+AGG 0.497639 3_1:+74058865 Msa0374600:CDS
AGTGGAAGGTTTGATTTAGT+GGG 0.498332 3_1:+74054954 Msa0374600:CDS
ATTAAAGAAATTCAAGCTCA+AGG 0.500012 3_1:+74054981 Msa0374600:CDS
AAGTGATAATGATCAATTCA+AGG 0.504392 3_1:+74055236 Msa0374600:CDS
GCTGCCTTCTTGGAAAATAG+TGG 0.505645 3_1:+74056777 Msa0374600:CDS
GCCTTGTTCATAGCAAAGAA+AGG 0.509544 3_1:+74056140 Msa0374600:CDS
TTATTATGATGAGGCTCCAC+TGG 0.510643 3_1:+74056334 Msa0374600:CDS
GAACCAAGGTTAAGCACTAC+AGG 0.511347 3_1:-74058854 None:intergenic
AGTTGCTGGTTTGAGTAAAG+TGG 0.516443 3_1:+74058092 Msa0374600:CDS
ATGGCCGTGGGACTTCAAAC+CGG 0.524566 3_1:+74055614 Msa0374600:CDS
GTGTCTAGAGTGATTCCTAA+GGG 0.526469 3_1:-74059456 None:intergenic
CTATCCTCGTAGCACTCCTC+AGG 0.528740 3_1:+74052775 Msa0374600:CDS
AAGACTACATTCTTGCAGCC+TGG 0.529766 3_1:-74056870 None:intergenic
CTACATTCTTGCAGCCTGGT+AGG 0.536592 3_1:-74056866 None:intergenic
CTTGGAAAATAGTGGACCTA+GGG 0.539564 3_1:+74056785 Msa0374600:CDS
GTGTCTCTTTGCACCGTCCA+TGG 0.539794 3_1:+74052677 Msa0374600:CDS
TCACGAGCCTCAACAAGGCC+AGG 0.541047 3_1:+74054613 Msa0374600:CDS
CAATGTATGGTCCAATTCGA+AGG 0.542390 3_1:-74055016 None:intergenic
CTTGCTTGGGTTAATGGCCA+AGG 0.543132 3_1:+74058890 Msa0374600:CDS
AGGATACTCATTGATTTCCC+AGG 0.544978 3_1:-74056846 None:intergenic
AAGATACATCTGACTATATG+TGG 0.549097 3_1:+74057229 Msa0374600:CDS
AGATTTCAGTAATTACTCAT+GGG 0.549878 3_1:+74058128 Msa0374600:CDS
ATATTTCGTATGAATTGCCT+GGG 0.552300 3_1:+74056829 Msa0374600:CDS
AGGACCTATCATACTATCCC+AGG 0.553587 3_1:+74055426 Msa0374600:CDS
ACCACATTCGATGCACCAGC+TGG 0.554238 3_1:+74058824 Msa0374600:CDS
TGTGTCTAGAGTGATTCCTA+AGG 0.556583 3_1:-74059457 None:intergenic
CAAGAAGGCAGCACATTCTG+TGG 0.556669 3_1:-74056766 None:intergenic
AAGTTATGTCAATTATTACA+TGG 0.562787 3_1:+74056163 Msa0374600:CDS
TCCTTTCTTTGCTATGAACA+AGG 0.565995 3_1:-74056141 None:intergenic
AAGAATGTAGTCTTCAACAC+CGG 0.567336 3_1:+74056879 Msa0374600:CDS
GCTGAATTGAACTTTAATTG+TGG 0.567491 3_1:-74057114 None:intergenic
TCTTGGAAAATAGTGGACCT+AGG 0.570208 3_1:+74056784 Msa0374600:CDS
GAAACATACCATTGTTGTGA+AGG 0.573167 3_1:-74058956 None:intergenic
TCTTACAAGCAAAGAGCCAC+CGG 0.573249 3_1:+74059635 Msa0374600:CDS
CTGTGAGCCTAAGCTGAAGG+TGG 0.573454 3_1:-74056538 None:intergenic
TGGGCTGCCCAAATGGCCGT+GGG 0.573977 3_1:+74055602 Msa0374600:CDS
CATGCAATGGCATGCAATGT+GGG 0.574956 3_1:+74055863 Msa0374600:CDS
ACTCAAACCACCTTCAGCTT+AGG 0.578526 3_1:+74056531 Msa0374600:CDS
TATCAAAATTAGTTCCTCCA+TGG 0.578938 3_1:-74056283 None:intergenic
ACGAATTTGATGCAGTACCA+TGG 0.579385 3_1:+74056266 Msa0374600:intron
TTGCAAATCTATTCAGTCAG+TGG 0.580451 3_1:+74058438 Msa0374600:CDS
CGTAGGTAACATTGCCACCA+TGG 0.581586 3_1:-74052694 None:intergenic
GATCCTGTAGTGCTTAACCT+TGG 0.586671 3_1:+74058851 Msa0374600:CDS
TCCATACTTAGTGCAACAGT+GGG 0.588438 3_1:+74057732 Msa0374600:CDS
TGCAGTATGAGTTTAGTGGA+AGG 0.589406 3_1:+74054940 Msa0374600:intron
GGTAACATTGCCACCATGGA+CGG 0.589509 3_1:-74052690 None:intergenic
ATTTCCAAAGCCAAAGAAGG+AGG 0.589753 3_1:+74054554 Msa0374600:CDS
CAATTCTCTGTCCATAGTGA+AGG 0.589841 3_1:-74055919 None:intergenic
CAACAATACGCAAGTTACAA+TGG 0.590171 3_1:+74057671 Msa0374600:CDS
GTATCTTTCCACAAACCAGA+TGG 0.590713 3_1:+74058929 Msa0374600:CDS
GAGGTTACCTGGCCTTGTTG+AGG 0.591838 3_1:-74054620 None:intergenic
GTTTGAGTTCCATCAAGTAG+AGG 0.592892 3_1:-74056516 None:intergenic
TACCTACGACAGAACATCGT+TGG 0.596916 3_1:+74052709 Msa0374600:CDS
TTGCTGTGAGCCTAAGCTGA+AGG 0.597462 3_1:-74056541 None:intergenic
ATGCAGATCAACGCATGCAA+TGG 0.599303 3_1:+74055850 Msa0374600:intron
CTCCATACTTAGTGCAACAG+TGG 0.602703 3_1:+74057731 Msa0374600:CDS
GTGGATCAAGTAAAGTTCAG+TGG 0.607801 3_1:+74058457 Msa0374600:CDS
TTAACTGTAGGTTCTGCACA+TGG 0.608812 3_1:+74057642 Msa0374600:intron
GCCAGCTGGTGCATCGAATG+TGG 0.611606 3_1:-74058825 None:intergenic
ACTACAGGATCATTGCCAGC+TGG 0.612769 3_1:-74058839 None:intergenic
AATAACAGCTTATTATGATG+AGG 0.614024 3_1:+74056325 Msa0374600:CDS
TCTTGTTTACACATCATCCA+AGG 0.616222 3_1:-74055641 None:intergenic
GATTTCAGTAATTACTCATG+GGG 0.616447 3_1:+74058129 Msa0374600:CDS
ACCATACCATATTCATCCAG+TGG 0.618114 3_1:-74056350 None:intergenic
GTTCTTAGTATATACAGTCA+AGG 0.620590 3_1:+74057415 Msa0374600:CDS
ATTTCCTTTAGCTATACCGG+TGG 0.628688 3_1:-74059651 None:intergenic
AGTGAATTGAACCAGAGAAG+AGG 0.633803 3_1:-74052754 None:intergenic
AGCTGTTATTATGAAAGCAG+AGG 0.636343 3_1:-74056312 None:intergenic
AGTATCGGCAAAATTAGGGA+TGG 0.638859 3_1:-74057163 None:intergenic
TTGAGTAAAGTGGAAGTCCA+AGG 0.642100 3_1:+74058102 Msa0374600:CDS
AAATCAAAATCATGGGAGAG+TGG 0.642102 3_1:+74052621 Msa0374600:exon
AATGTATGGTCCAATTCGAA+GGG 0.643269 3_1:-74055015 None:intergenic
TGTAGTCTTCAACACCGGCA+AGG 0.643630 3_1:+74056884 Msa0374600:CDS
ATGGAACTCCTTCACAACAA+TGG 0.646963 3_1:+74058948 Msa0374600:CDS
GTTCTTTCCTAAAATCGACT+GGG 0.647340 3_1:+74059397 Msa0374600:CDS
GTCCCTTTCCCATAGAACCA+AGG 0.648226 3_1:-74058868 None:intergenic
CACACCGGTTTGAAGTCCCA+CGG 0.651964 3_1:-74055618 None:intergenic
AGATGATGCTCCTGATCCAG+TGG 0.653215 3_1:+74055661 Msa0374600:CDS
AATCTTCACGAGCCTCAACA+AGG 0.655545 3_1:+74054608 Msa0374600:CDS
ACACATCATCCAAGGCACAC+CGG 0.656038 3_1:-74055633 None:intergenic
GACCAACGATGTTCTGTCGT+AGG 0.656925 3_1:-74052711 None:intergenic
GCATGCAATGGCATGCAATG+TGG 0.659047 3_1:+74055862 Msa0374600:CDS
TTATACTTGAAGAAGAAACC+GGG 0.659840 3_1:+74059430 Msa0374600:CDS
AAATCAATGAGTATCCTACC+AGG 0.665635 3_1:+74056852 Msa0374600:CDS
TCAAAATCATGGGAGAGTGG+TGG 0.675828 3_1:+74052624 Msa0374600:exon
GCTCTACTAAACCACTCACA+TGG 0.681185 3_1:+74058493 Msa0374600:CDS
TTGGTTAGACAACCAAAATG+GGG 0.683195 3_1:+74056450 Msa0374600:CDS
TCTCTTTGCACCGTCCATGG+TGG 0.685695 3_1:+74052680 Msa0374600:CDS
AATGTGGGAGAAACTTTAAG+GGG 0.688593 3_1:+74055878 Msa0374600:CDS
TGTCTAGAGTGATTCCTAAG+GGG 0.698523 3_1:-74059455 None:intergenic
ATTACCTGATACCATGTGAG+TGG 0.707159 3_1:-74058504 None:intergenic
AATTTGATGCAGTACCATGG+AGG 0.742597 3_1:+74056269 Msa0374600:intron
CGTACCTGAGGAGTGCTACG+AGG 0.747266 3_1:-74052779 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAATTAAATAATAT+TGG - chr3_1:74053959-74053978 None:intergenic 0.0%
!!! AAGTTTTTTTTTTTTTTTTG+AGG + chr3_1:74052896-74052915 Msa0374600:intron 10.0%
!! TCATATATGATTAATAAATT+TGG + chr3_1:74053345-74053364 Msa0374600:intron 10.0%
!! TATTAGTTAAACTATATTAT+CGG + chr3_1:74053817-74053836 Msa0374600:intron 10.0%
!! AAATAATTAAATAATATTGG+AGG - chr3_1:74053956-74053975 None:intergenic 10.0%
!! AATTTGATATGTTAATATTT+GGG + chr3_1:74057605-74057624 Msa0374600:intron 10.0%
!! TTCGTTAAAAAAAATATTTA+CGG + chr3_1:74058768-74058787 Msa0374600:intron 10.0%
!! TCACATATGAAAAATAAATT+TGG + chr3_1:74053242-74053261 Msa0374600:intron 15.0%
!! GTATACTTCATAAATAAAAT+TGG - chr3_1:74053577-74053596 None:intergenic 15.0%
!! ATTAGTTAAACTATATTATC+GGG + chr3_1:74053818-74053837 Msa0374600:intron 15.0%
!! TGATATATATAACTAACAAT+TGG - chr3_1:74053857-74053876 None:intergenic 15.0%
!! CGATATTATTAATTAAGATT+AGG + chr3_1:74053893-74053912 Msa0374600:intron 15.0%
!! AAGGAAAAAAAAACTTTATA+AGG + chr3_1:74054019-74054038 Msa0374600:intron 15.0%
!! AGGAAAAAAAAACTTTATAA+GGG + chr3_1:74054020-74054039 Msa0374600:intron 15.0%
!!! TTACATAATTTGTATGAATT+TGG + chr3_1:74054402-74054421 Msa0374600:intron 15.0%
!!! ATATTTGAAATTGTTTTTGT+TGG + chr3_1:74055487-74055506 Msa0374600:intron 15.0%
!! CAATTTGATATGTTAATATT+TGG + chr3_1:74057604-74057623 Msa0374600:intron 15.0%
!!! TAATTTTTGTAACTTATTAG+TGG - chr3_1:74057822-74057841 None:intergenic 15.0%
!!! AGATTATCTATGAATTTTTT+AGG - chr3_1:74058566-74058585 None:intergenic 15.0%
!! AAAAAATTCATAGATAATCT+TGG + chr3_1:74058566-74058585 Msa0374600:intron 15.0%
!!! TAATTTTCTATTTTTCTTCA+CGG + chr3_1:74059279-74059298 Msa0374600:intron 15.0%
!!! TTATTGTATGTTTTTAAAGC+TGG + chr3_1:74052988-74053007 Msa0374600:intron 20.0%
!! GTTATATTTCTTACCTAATA+AGG - chr3_1:74053090-74053109 None:intergenic 20.0%
!!! GTTTTATAATTCATTCAAGA+TGG - chr3_1:74053125-74053144 None:intergenic 20.0%
!!! TTCTTATGTTTTATCATTGA+TGG + chr3_1:74053635-74053654 Msa0374600:intron 20.0%
!!! CTAATTTTATATGTTTCACA+TGG + chr3_1:74053696-74053715 Msa0374600:intron 20.0%
!! AATTAAAAACTCTTTCTCAA+GGG - chr3_1:74053727-74053746 None:intergenic 20.0%
!! TAATTAAAAACTCTTTCTCA+AGG - chr3_1:74053728-74053747 None:intergenic 20.0%
!! ATTCACATAATTTCAGAAAA+AGG - chr3_1:74053784-74053803 None:intergenic 20.0%
!! TTAGTTAAACTATATTATCG+GGG + chr3_1:74053819-74053838 Msa0374600:intron 20.0%
!!! TCATCTTTTTCTATAAAAGA+AGG + chr3_1:74054208-74054227 Msa0374600:intron 20.0%
!!! ATTTTTAAGTAATACTCGAT+TGG - chr3_1:74054264-74054283 None:intergenic 20.0%
!! CAAATTATCTTGATATATGT+AGG + chr3_1:74054351-74054370 Msa0374600:intron 20.0%
!!! GTCATTTTGAAGAATTATTT+CGG - chr3_1:74054379-74054398 None:intergenic 20.0%
!! ATGCATAATGACATAAATAT+TGG - chr3_1:74054468-74054487 None:intergenic 20.0%
!! TATTTGGTATGAATATTGAA+TGG - chr3_1:74055120-74055139 None:intergenic 20.0%
!! ACAATTTCAAATATATGTAC+TGG - chr3_1:74055481-74055500 None:intergenic 20.0%
!!! CTTTCAAGTATTATTTATCA+TGG + chr3_1:74055689-74055708 Msa0374600:intron 20.0%
!!! TAAAAGAAAAACTGCAATTT+TGG - chr3_1:74055986-74056005 None:intergenic 20.0%
!!! ATTAATAGTTTACAAGCTTT+TGG + chr3_1:74056071-74056090 Msa0374600:intron 20.0%
!! AAGTTATGTCAATTATTACA+TGG + chr3_1:74056163-74056182 Msa0374600:CDS 20.0%
!! AAGAAAAATAAGCAGAAATT+CGG - chr3_1:74056233-74056252 None:intergenic 20.0%
!! AGTACTAGTTAAAAAAATTG+CGG - chr3_1:74056603-74056622 None:intergenic 20.0%
!! ACTAGTACTACTTAAATAAA+AGG + chr3_1:74056614-74056633 Msa0374600:intron 20.0%
!!! CATACGAAATATTTTGAAAT+TGG - chr3_1:74056821-74056840 None:intergenic 20.0%
!! TATCAAATTGTACAATAGAA+AGG - chr3_1:74057594-74057613 None:intergenic 20.0%
!! AAAAATGTCAATCTGATAAA+CGG + chr3_1:74057696-74057715 Msa0374600:CDS 20.0%
!!! TGTAATCCATAATCTTATTT+TGG - chr3_1:74058018-74058037 None:intergenic 20.0%
!!! GATGTAGAATTTTTAAATGA+AGG + chr3_1:74058395-74058414 Msa0374600:intron 20.0%
!!! TAGAATTTTTAAATGAAGGT+TGG + chr3_1:74058399-74058418 Msa0374600:intron 20.0%
!!! AGAATTTTTAAATGAAGGTT+GGG + chr3_1:74058400-74058419 Msa0374600:intron 20.0%
!!! GAATTTTTTAGGAAAGATAA+TGG - chr3_1:74058555-74058574 None:intergenic 20.0%
!! ACTAATATTTATTTACGTGT+TGG + chr3_1:74058794-74058813 Msa0374600:intron 20.0%
!! CTAATATTTATTTACGTGTT+GGG + chr3_1:74058795-74058814 Msa0374600:intron 20.0%
!! TAAACATTCTACATATTTCA+TGG - chr3_1:74059060-74059079 None:intergenic 20.0%
!!! CAACTGATATTTTTTTATTC+AGG + chr3_1:74059361-74059380 Msa0374600:intron 20.0%
!! AGAATTGATATACCATTATT+TGG + chr3_1:74059586-74059605 Msa0374600:intron 20.0%
!!! GAAACATTCTTTACTTTTGT+TGG + chr3_1:74052596-74052615 Msa0374600:five_prime_UTR 25.0%
!!! CATATATATCCTGTGTTTTT+TGG + chr3_1:74052809-74052828 Msa0374600:intron 25.0%
!!! TCTTTTAGAAAAGAGTAAAG+TGG - chr3_1:74052945-74052964 None:intergenic 25.0%
! AACATATGTAAGAAAAAGAG+AGG + chr3_1:74053028-74053047 Msa0374600:intron 25.0%
! TTATTCTCATTGTCCTTATT+AGG + chr3_1:74053074-74053093 Msa0374600:intron 25.0%
! ATAATTCATTCAAGATGGAA+TGG - chr3_1:74053120-74053139 None:intergenic 25.0%
! TTACAATAATGTGTGTAACA+TGG + chr3_1:74053547-74053566 Msa0374600:intron 25.0%
! TACAATAATGTGTGTAACAT+GGG + chr3_1:74053548-74053567 Msa0374600:intron 25.0%
!! TTTAATTTCTCAGTGAATCT+AGG + chr3_1:74053926-74053945 Msa0374600:intron 25.0%
!! AATAACGTGTAGCATATTTT+TGG + chr3_1:74054065-74054084 Msa0374600:intron 25.0%
! TATGATAACTAGTGCAATTA+AGG - chr3_1:74054099-74054118 None:intergenic 25.0%
! AATCATCTAAGTAAGTTCAA+AGG + chr3_1:74054180-74054199 Msa0374600:intron 25.0%
! AATGTACGTAACCAAAAAAA+AGG + chr3_1:74054281-74054300 Msa0374600:intron 25.0%
!! TTTTCATTCTCAAATTGTCT+TGG + chr3_1:74054425-74054444 Msa0374600:intron 25.0%
! ACATAAATATTGGAACCTAT+AGG - chr3_1:74054458-74054477 None:intergenic 25.0%
!!! GTTCATAATTTTAACAGATG+TGG + chr3_1:74054522-74054541 Msa0374600:intron 25.0%
! ATTATATTTATGCACCAATG+AGG - chr3_1:74054642-74054661 None:intergenic 25.0%
! AAAATAGATGATAAAACACG+AGG - chr3_1:74054669-74054688 None:intergenic 25.0%
! TTGTCCAAAAAAAAAATGCA+TGG + chr3_1:74054896-74054915 Msa0374600:intron 25.0%
!!! ACAACCATGCATTTTTTTTT+TGG - chr3_1:74054903-74054922 None:intergenic 25.0%
! ATTAAAGAAATTCAAGCTCA+AGG + chr3_1:74054981-74055000 Msa0374600:CDS 25.0%
! ATGTAGCAATGGAAAATATT+TGG - chr3_1:74055136-74055155 None:intergenic 25.0%
!!! TTTCTTCTAAAATGTAGCAA+TGG - chr3_1:74055147-74055166 None:intergenic 25.0%
!! AAGTGATAATGATCAATTCA+AGG + chr3_1:74055236-74055255 Msa0374600:CDS 25.0%
!! AACAAAAGTTATTGGTAGTT+TGG - chr3_1:74055264-74055283 None:intergenic 25.0%
!!! TTTCATCATGTTGACTATTT+TGG - chr3_1:74055380-74055399 None:intergenic 25.0%
! ATATTCATTCTCAATCTACA+TGG - chr3_1:74055534-74055553 None:intergenic 25.0%
! ATGTAGATTGAGAATGAATA+TGG + chr3_1:74055533-74055552 Msa0374600:intron 25.0%
! CAAGTATTATTTATCATGGA+TGG + chr3_1:74055693-74055712 Msa0374600:intron 25.0%
! TAAAACTCATGAAACTACTT+GGG - chr3_1:74055773-74055792 None:intergenic 25.0%
! AGCAAATTATCTTATCTAAC+TGG + chr3_1:74056022-74056041 Msa0374600:intron 25.0%
!!! GAATTTCTGCTTATTTTTCT+TGG + chr3_1:74056232-74056251 Msa0374600:intron 25.0%
!!! AGGAACTAATTTTGATAGAT+TGG + chr3_1:74056289-74056308 Msa0374600:CDS 25.0%
! AATAACAGCTTATTATGATG+AGG + chr3_1:74056325-74056344 Msa0374600:CDS 25.0%
! TAATTAAGAATGAATCTTCC+TGG + chr3_1:74056568-74056587 Msa0374600:intron 25.0%
!!! CTCATCGATTTTAAAAGTAA+TGG - chr3_1:74056998-74057017 None:intergenic 25.0%
! ATTTAGTTAGTGAAACTGAA+AGG + chr3_1:74057031-74057050 Msa0374600:intron 25.0%
!!! CATATTTTTTATGTTCGTGT+AGG + chr3_1:74057059-74057078 Msa0374600:intron 25.0%
! GATAGGAAAAAAACATCTTT+GGG + chr3_1:74057516-74057535 Msa0374600:intron 25.0%
!!! CTATACATGTTTTTAACTGT+AGG + chr3_1:74057630-74057649 Msa0374600:intron 25.0%
! AAAATGTCAATCTGATAAAC+GGG + chr3_1:74057697-74057716 Msa0374600:CDS 25.0%
! TTAACAATTGAGACAATTAC+CGG - chr3_1:74057762-74057781 None:intergenic 25.0%
!! CTTTCCTTTTTATTCATCAT+CGG + chr3_1:74057783-74057802 Msa0374600:intron 25.0%
! ATTGACAAATACTATGAAGA+TGG - chr3_1:74057854-74057873 None:intergenic 25.0%
! TGATAGCCAAAATAAGATTA+TGG + chr3_1:74058009-74058028 Msa0374600:intron 25.0%
!! TTCTTTTTACATGAAGAACT+CGG + chr3_1:74058050-74058069 Msa0374600:intron 25.0%
! AGATTTCAGTAATTACTCAT+GGG + chr3_1:74058128-74058147 Msa0374600:CDS 25.0%
!! TTCTTATACATTTTAAGCAG+TGG - chr3_1:74058308-74058327 None:intergenic 25.0%
! AAATTCATAGATAATCTTGG+AGG + chr3_1:74058569-74058588 Msa0374600:intron 25.0%
! AATTCATAGATAATCTTGGA+GGG + chr3_1:74058570-74058589 Msa0374600:intron 25.0%
!!! TATCTCAATCTTTCTAAGAT+TGG + chr3_1:74058656-74058675 Msa0374600:intron 25.0%
! TGTAGAATGTTTATAAACCA+TGG + chr3_1:74059067-74059086 Msa0374600:intron 25.0%
! ATGTTTATAAACCATGGAAA+AGG + chr3_1:74059073-74059092 Msa0374600:intron 25.0%
! TTGAGCATAGAGTTATAAAA+AGG - chr3_1:74059157-74059176 None:intergenic 25.0%
!! CAACATTTTCATTTCCATTT+AGG + chr3_1:74059174-74059193 Msa0374600:intron 25.0%
! GTTGTAAGTAAATAAATGCT+TGG - chr3_1:74059345-74059364 None:intergenic 25.0%
!! ATGATGTGTGATCTTTTAAA+TGG - chr3_1:74059509-74059528 None:intergenic 25.0%
! TGTTGGTGAAATCAAAATCA+TGG + chr3_1:74052613-74052632 Msa0374600:exon 30.0%
! GTTGGTGAAATCAAAATCAT+GGG + chr3_1:74052614-74052633 Msa0374600:exon 30.0%
!! ACTTTAGAACCAAAAAACAC+AGG - chr3_1:74052821-74052840 None:intergenic 30.0%
AAACATGAGTGCTTATCATA+TGG - chr3_1:74052969-74052988 None:intergenic 30.0%
ACAATAATGTGTGTAACATG+GGG + chr3_1:74053549-74053568 Msa0374600:intron 30.0%
TTTATATGTTTCACATGGTG+AGG + chr3_1:74053701-74053720 Msa0374600:intron 30.0%
GGAATATCATACTCACATAA+TGG - chr3_1:74053763-74053782 None:intergenic 30.0%
GCAAAACTAATGGTTTAACA+AGG + chr3_1:74054000-74054019 Msa0374600:intron 30.0%
TCTTATCTAACACGATTGTA+AGG - chr3_1:74054124-74054143 None:intergenic 30.0%
!!! CATCTTTGAAGCCTTTTTTT+TGG - chr3_1:74054295-74054314 None:intergenic 30.0%
TTAATTTCCAAAGCCAAAGA+AGG + chr3_1:74054551-74054570 Msa0374600:CDS 30.0%
! TCATACAAACTTACGTGTTT+TGG + chr3_1:74054585-74054604 Msa0374600:CDS 30.0%
ATACTTGCAAACAAAATGCA+TGG + chr3_1:74054870-74054889 Msa0374600:intron 30.0%
GTGCTGAAAATTAAATCTGT+GGG - chr3_1:74055070-74055089 None:intergenic 30.0%
TGTGCTGAAAATTAAATCTG+TGG - chr3_1:74055071-74055090 None:intergenic 30.0%
!!! AACTCTCAATTTTTTGCTGT+AGG + chr3_1:74055169-74055188 Msa0374600:intron 30.0%
!!! ACTCTCAATTTTTTGCTGTA+GGG + chr3_1:74055170-74055189 Msa0374600:intron 30.0%
TCACTTCTAAATACAATTCC+AGG - chr3_1:74055222-74055241 None:intergenic 30.0%
GGAAGGAAAACAAAAGTTAT+TGG - chr3_1:74055272-74055291 None:intergenic 30.0%
ACTACCAAAAATTGAATGCA+TGG - chr3_1:74055293-74055312 None:intergenic 30.0%
GTGAAACTGTCATTAAGAAA+AGG - chr3_1:74055341-74055360 None:intergenic 30.0%
TTGCATTGAAGTTTAAACCT+GGG - chr3_1:74055446-74055465 None:intergenic 30.0%
AAAGTAAGTTTCGAGAGAAT+GGG + chr3_1:74055564-74055583 Msa0374600:CDS 30.0%
GTAAAACTCATGAAACTACT+TGG - chr3_1:74055774-74055793 None:intergenic 30.0%
CTTCTAAACGATTCAACATT+AGG - chr3_1:74055796-74055815 None:intergenic 30.0%
! GATGTCATTTACTTAACGTT+TGG + chr3_1:74056048-74056067 Msa0374600:intron 30.0%
! AATAGTTTACAAGCTTTTGG+TGG + chr3_1:74056074-74056093 Msa0374600:intron 30.0%
TATGAACAAGGCAACATTAT+AGG - chr3_1:74056132-74056151 None:intergenic 30.0%
TATCAAAATTAGTTCCTCCA+TGG - chr3_1:74056286-74056305 None:intergenic 30.0%
TTTGGTTAGACAACCAAAAT+GGG + chr3_1:74056449-74056468 Msa0374600:CDS 30.0%
AATATTTCGTATGAATTGCC+TGG + chr3_1:74056828-74056847 Msa0374600:CDS 30.0%
ATATTTCGTATGAATTGCCT+GGG + chr3_1:74056829-74056848 Msa0374600:CDS 30.0%
GCTGAATTGAACTTTAATTG+TGG - chr3_1:74057117-74057136 None:intergenic 30.0%
AGTTCAATTCAGCTGAAAAT+TGG + chr3_1:74057124-74057143 Msa0374600:CDS 30.0%
!! TTGAAGTATCGGCAAAATTA+GGG - chr3_1:74057170-74057189 None:intergenic 30.0%
!! TTTGAAGTATCGGCAAAATT+AGG - chr3_1:74057171-74057190 None:intergenic 30.0%
AAGATACATCTGACTATATG+TGG + chr3_1:74057229-74057248 Msa0374600:CDS 30.0%
TGTCAACAATCATCTTAGTA+AGG - chr3_1:74057342-74057361 None:intergenic 30.0%
TTGACATGTTGAATTGTTGA+TGG + chr3_1:74057356-74057375 Msa0374600:intron 30.0%
GTTCTTAGTATATACAGTCA+AGG + chr3_1:74057415-74057434 Msa0374600:CDS 30.0%
GGATAGGAAAAAAACATCTT+TGG + chr3_1:74057515-74057534 Msa0374600:intron 30.0%
AGAATCATACGAATAGACAT+TGG + chr3_1:74057980-74057999 Msa0374600:intron 30.0%
! TCTTTTTACATGAAGAACTC+GGG + chr3_1:74058051-74058070 Msa0374600:intron 30.0%
AATTACTGAAATCTCTTCCT+TGG - chr3_1:74058122-74058141 None:intergenic 30.0%
GAGATTTCAGTAATTACTCA+TGG + chr3_1:74058127-74058146 Msa0374600:CDS 30.0%
GATTTCAGTAATTACTCATG+GGG + chr3_1:74058129-74058148 Msa0374600:CDS 30.0%
TGGATAATGATAGTTTCAAG+GGG - chr3_1:74058288-74058307 None:intergenic 30.0%
GTGGATAATGATAGTTTCAA+GGG - chr3_1:74058289-74058308 None:intergenic 30.0%
AGTGGATAATGATAGTTTCA+AGG - chr3_1:74058290-74058309 None:intergenic 30.0%
!! AATCTTTCTAAGATTGGACA+AGG + chr3_1:74058662-74058681 Msa0374600:intron 30.0%
!! ATCTTTCTAAGATTGGACAA+GGG + chr3_1:74058663-74058682 Msa0374600:intron 30.0%
GTCTTAAATACTTTACTCTG+TGG - chr3_1:74058986-74059005 None:intergenic 30.0%
! TATAACAGTTACCTTTTCCA+TGG - chr3_1:74059087-74059106 None:intergenic 30.0%
CTTCTTCAAGTATAACAAGT+AGG - chr3_1:74059425-74059444 None:intergenic 30.0%
GTTATACTTGAAGAAGAAAC+CGG + chr3_1:74059429-74059448 Msa0374600:CDS 30.0%
TTATACTTGAAGAAGAAACC+GGG + chr3_1:74059430-74059449 Msa0374600:CDS 30.0%
! ATATACCATTATTTGGCTTC+AGG + chr3_1:74059593-74059612 Msa0374600:intron 30.0%
AAATCAAAATCATGGGAGAG+TGG + chr3_1:74052621-74052640 Msa0374600:exon 35.0%
AGAACATCGTTGGTCATTAA+CGG + chr3_1:74052719-74052738 Msa0374600:CDS 35.0%
! CAGAGAAGAGGATTTTATGA+TGG - chr3_1:74052745-74052764 None:intergenic 35.0%
CATCATAAAATCCTCTTCTC+TGG + chr3_1:74052743-74052762 Msa0374600:CDS 35.0%
! GCTGAAACTTAAAGCACTTA+AGG + chr3_1:74053495-74053514 Msa0374600:intron 35.0%
!!! AACCATTAGTTTTGCCAAGA+CGG - chr3_1:74053995-74054014 None:intergenic 35.0%
AAGAATGTTTGACGATAGAG+TGG + chr3_1:74054140-74054159 Msa0374600:intron 35.0%
AGAATGTTTGACGATAGAGT+GGG + chr3_1:74054141-74054160 Msa0374600:intron 35.0%
!! TTGGCTTTGGAAATTAAGTC+AGG - chr3_1:74054548-74054567 None:intergenic 35.0%
CCACTGAATTTCAACTACTA+AGG - chr3_1:74054736-74054755 None:intergenic 35.0%
CCTTAGTAGTTGAAATTCAG+TGG + chr3_1:74054733-74054752 Msa0374600:intron 35.0%
ATGTGTGTCCCACAAAAATT+TGG + chr3_1:74054769-74054788 Msa0374600:intron 35.0%
! TAGTGGAAGGTTTGATTTAG+TGG + chr3_1:74054953-74054972 Msa0374600:CDS 35.0%
! AGTGGAAGGTTTGATTTAGT+GGG + chr3_1:74054954-74054973 Msa0374600:CDS 35.0%
TTATATGTGACCCTTCGAAT+TGG + chr3_1:74055005-74055024 Msa0374600:CDS 35.0%
AATGTATGGTCCAATTCGAA+GGG - chr3_1:74055018-74055037 None:intergenic 35.0%
ATTGAGAGTGAATGCACTTA+TGG + chr3_1:74055035-74055054 Msa0374600:CDS 35.0%
TTGAGAGTGAATGCACTTAT+GGG + chr3_1:74055036-74055055 Msa0374600:CDS 35.0%
!!! CTCTCAATTTTTTGCTGTAG+GGG + chr3_1:74055171-74055190 Msa0374600:intron 35.0%
GGAACATCATGTAACCATAA+TGG - chr3_1:74055201-74055220 None:intergenic 35.0%
TTATGGTTACATGATGTTCC+TGG + chr3_1:74055201-74055220 Msa0374600:CDS 35.0%
CCAAAAATTGAATGCATGGA+AGG - chr3_1:74055289-74055308 None:intergenic 35.0%
! CCTTCCATGCATTCAATTTT+TGG + chr3_1:74055286-74055305 Msa0374600:intron 35.0%
TCCTTGTGAAGCAAAAAGAT+TGG - chr3_1:74055407-74055426 None:intergenic 35.0%
! AATCTTTTTGCTTCACAAGG+AGG + chr3_1:74055406-74055425 Msa0374600:CDS 35.0%
TAAACCTGGGATAGTATGAT+AGG - chr3_1:74055433-74055452 None:intergenic 35.0%
GTTGCATTGAAGTTTAAACC+TGG - chr3_1:74055447-74055466 None:intergenic 35.0%
CAAAGTAAGTTTCGAGAGAA+TGG + chr3_1:74055563-74055582 Msa0374600:CDS 35.0%
! TCTTGTTTACACATCATCCA+AGG - chr3_1:74055644-74055663 None:intergenic 35.0%
! CTCCGTCTATTTTATATCGT+CGG + chr3_1:74055726-74055745 Msa0374600:intron 35.0%
GACCGACGATATAAAATAGA+CGG - chr3_1:74055731-74055750 None:intergenic 35.0%
CAATGTGGGAGAAACTTTAA+GGG + chr3_1:74055877-74055896 Msa0374600:CDS 35.0%
AATGTGGGAGAAACTTTAAG+GGG + chr3_1:74055878-74055897 Msa0374600:CDS 35.0%
! TCCTTTCTTTGCTATGAACA+AGG - chr3_1:74056144-74056163 None:intergenic 35.0%
AGCTGTTATTATGAAAGCAG+AGG - chr3_1:74056315-74056334 None:intergenic 35.0%
GTTTGGTTAGACAACCAAAA+TGG + chr3_1:74056448-74056467 Msa0374600:CDS 35.0%
TTGGTTAGACAACCAAAATG+GGG + chr3_1:74056450-74056469 Msa0374600:CDS 35.0%
AAATTGCGGAAAATATGTCC+AGG - chr3_1:74056589-74056608 None:intergenic 35.0%
! TTTTCTCACCTTTTTCCTTC+AGG + chr3_1:74056725-74056744 Msa0374600:intron 35.0%
AACATAAGCCTGAAGGAAAA+AGG - chr3_1:74056736-74056755 None:intergenic 35.0%
! TTCTGAAAACATAAGCCTGA+AGG - chr3_1:74056743-74056762 None:intergenic 35.0%
AATTGGATTGTTACATCCCT+AGG - chr3_1:74056804-74056823 None:intergenic 35.0%
AAATCAATGAGTATCCTACC+AGG + chr3_1:74056852-74056871 Msa0374600:CDS 35.0%
AAGAATGTAGTCTTCAACAC+CGG + chr3_1:74056879-74056898 Msa0374600:CDS 35.0%
! AACATTCGATTTTACCTTGC+CGG - chr3_1:74056901-74056920 None:intergenic 35.0%
ATGGTCAAATCAAGTAAAGC+AGG - chr3_1:74056979-74056998 None:intergenic 35.0%
TAATTGTGGTTTCATTGCTC+TGG - chr3_1:74057103-74057122 None:intergenic 35.0%
!!! GTCTGCTCTTTTTGAAGTAT+CGG - chr3_1:74057181-74057200 None:intergenic 35.0%
ACTATATGTGGTACACTTTC+AGG + chr3_1:74057241-74057260 Msa0374600:CDS 35.0%
CTAAGAACAGATTGTGCATT+AGG - chr3_1:74057403-74057422 None:intergenic 35.0%
! GTTTTGCATTCTTTCGTCAA+TGG + chr3_1:74057442-74057461 Msa0374600:CDS 35.0%
!! TTCGTCAATGGAGTTTTAAC+AGG + chr3_1:74057454-74057473 Msa0374600:CDS 35.0%
AGCACTAAATCTCATTTCTG+AGG + chr3_1:74057479-74057498 Msa0374600:intron 35.0%
! TTCTGAGGATCATGTTTCTT+AGG + chr3_1:74057494-74057513 Msa0374600:intron 35.0%
AGGATCATGTTTCTTAGGAT+AGG + chr3_1:74057499-74057518 Msa0374600:intron 35.0%
CAACAATACGCAAGTTACAA+TGG + chr3_1:74057671-74057690 Msa0374600:CDS 35.0%
CTTGCCGATGATGAATAAAA+AGG - chr3_1:74057790-74057809 None:intergenic 35.0%
AGGTAGAAGAAACTTCTCAA+TGG - chr3_1:74057901-74057920 None:intergenic 35.0%
! AGTCTTGTGATCTCAAATCT+AGG - chr3_1:74057921-74057940 None:intergenic 35.0%
! GATTTGAGATCACAAGACTA+TGG + chr3_1:74057922-74057941 Msa0374600:intron 35.0%
TTTACTCAAACCAGCAACTT+TGG - chr3_1:74058091-74058110 None:intergenic 35.0%
TAATTACTCATGGGGATATC+AGG + chr3_1:74058137-74058156 Msa0374600:CDS 35.0%
! TAAATGAAGGTTGGGTTGTT+AGG + chr3_1:74058408-74058427 Msa0374600:intron 35.0%
TTGCAAATCTATTCAGTCAG+TGG + chr3_1:74058438-74058457 Msa0374600:CDS 35.0%
GTAGGAGAAACAAAAAACCA+AGG - chr3_1:74058619-74058638 None:intergenic 35.0%
AGAATCTAGCACAAAGTAGT+AGG - chr3_1:74058637-74058656 None:intergenic 35.0%
TAAATGCTTAGCAGTTATGC+TGG - chr3_1:74058712-74058731 None:intergenic 35.0%
GAAACATACCATTGTTGTGA+AGG - chr3_1:74058959-74058978 None:intergenic 35.0%
GACTGTTTAGAAGACCTAAA+TGG - chr3_1:74059191-74059210 None:intergenic 35.0%
GTTCTTTCCTAAAATCGACT+GGG + chr3_1:74059397-74059416 Msa0374600:CDS 35.0%
! GTGTGATCTTTTAAATGGAG+AGG - chr3_1:74059504-74059523 None:intergenic 35.0%
TATTCGTATGACTGAACACA+GGG - chr3_1:74059554-74059573 None:intergenic 35.0%
TTATTCGTATGACTGAACAC+AGG - chr3_1:74059555-74059574 None:intergenic 35.0%
AGTGAATTGAACCAGAGAAG+AGG - chr3_1:74052757-74052776 None:intergenic 40.0%
ATATGACTTGAACGTACCTG+AGG - chr3_1:74052794-74052813 None:intergenic 40.0%
TGTCTTGGTCTATAGCCTAT+AGG + chr3_1:74054440-74054459 Msa0374600:intron 40.0%
ATTTCCAAAGCCAAAGAAGG+AGG + chr3_1:74054554-74054573 Msa0374600:CDS 40.0%
! TAATCCTCCTTCTTTGGCTT+TGG - chr3_1:74054561-74054580 None:intergenic 40.0%
GACATCTAATCCTCCTTCTT+TGG - chr3_1:74054567-74054586 None:intergenic 40.0%
TGGGACACACATGATTTAGT+GGG - chr3_1:74054761-74054780 None:intergenic 40.0%
! GTGTCTCGCCAAATTTTTGT+GGG - chr3_1:74054780-74054799 None:intergenic 40.0%
! TGTGTCTCGCCAAATTTTTG+TGG - chr3_1:74054781-74054800 None:intergenic 40.0%
CTTCTGCAGTATGAGTTTAG+TGG + chr3_1:74054936-74054955 Msa0374600:intron 40.0%
TGCAGTATGAGTTTAGTGGA+AGG + chr3_1:74054940-74054959 Msa0374600:intron 40.0%
CAATGTATGGTCCAATTCGA+AGG - chr3_1:74055019-74055038 None:intergenic 40.0%
GTGCATTCACTCTCAATGTA+TGG - chr3_1:74055032-74055051 None:intergenic 40.0%
! GCCAATCTTTTTGCTTCACA+AGG + chr3_1:74055403-74055422 Msa0374600:CDS 40.0%
ATACTTGAAAGACTGACCAC+TGG - chr3_1:74055680-74055699 None:intergenic 40.0%
GCAATGTGGGAGAAACTTTA+AGG + chr3_1:74055876-74055895 Msa0374600:CDS 40.0%
CAATTCTCTGTCCATAGTGA+AGG - chr3_1:74055922-74055941 None:intergenic 40.0%
CTTCACTATGGACAGAGAAT+TGG + chr3_1:74055920-74055939 Msa0374600:CDS 40.0%
! TCTGAAGCTGATCTCAAGTA+TGG - chr3_1:74056104-74056123 None:intergenic 40.0%
! GCCTTGTTCATAGCAAAGAA+AGG + chr3_1:74056140-74056159 Msa0374600:CDS 40.0%
! TTCGGCTAAGTTGAAAGAGA+AGG - chr3_1:74056215-74056234 None:intergenic 40.0%
ACGAATTTGATGCAGTACCA+TGG + chr3_1:74056266-74056285 Msa0374600:intron 40.0%
AATTTGATGCAGTACCATGG+AGG + chr3_1:74056269-74056288 Msa0374600:intron 40.0%
TTATTATGATGAGGCTCCAC+TGG + chr3_1:74056334-74056353 Msa0374600:CDS 40.0%
TCCACTGGATGAATATGGTA+TGG + chr3_1:74056349-74056368 Msa0374600:intron 40.0%
ACCATACCATATTCATCCAG+TGG - chr3_1:74056353-74056372 None:intergenic 40.0%
TTTGGTTGTCTAACCAAACC+TGG - chr3_1:74056447-74056466 None:intergenic 40.0%
ACCAAAATGGGGACATCTTA+AGG + chr3_1:74056461-74056480 Msa0374600:CDS 40.0%
! TCCTTAAGATGTCCCCATTT+TGG - chr3_1:74056465-74056484 None:intergenic 40.0%
TGTTCACAACCTCTACTTGA+TGG + chr3_1:74056507-74056526 Msa0374600:CDS 40.0%
! GTTTGAGTTCCATCAAGTAG+AGG - chr3_1:74056519-74056538 None:intergenic 40.0%
! AGGTCCACTATTTTCCAAGA+AGG - chr3_1:74056784-74056803 None:intergenic 40.0%
!! TCTTGGAAAATAGTGGACCT+AGG + chr3_1:74056784-74056803 Msa0374600:CDS 40.0%
!! CTTGGAAAATAGTGGACCTA+GGG + chr3_1:74056785-74056804 Msa0374600:CDS 40.0%
!! AGGATACTCATTGATTTCCC+AGG - chr3_1:74056849-74056868 None:intergenic 40.0%
!! AGTATCGGCAAAATTAGGGA+TGG - chr3_1:74057166-74057185 None:intergenic 40.0%
CAAACATTCTTTAGTGCAGC+TGG - chr3_1:74057291-74057310 None:intergenic 40.0%
!! TGTTGAATTGTTGATGGTGC+AGG + chr3_1:74057362-74057381 Msa0374600:intron 40.0%
ACATCTTTGGGCAAAAGACT+TGG + chr3_1:74057528-74057547 Msa0374600:intron 40.0%
TTAACTGTAGGTTCTGCACA+TGG + chr3_1:74057642-74057661 Msa0374600:intron 40.0%
TCCATACTTAGTGCAACAGT+GGG + chr3_1:74057732-74057751 Msa0374600:CDS 40.0%
! TTTCTAGAGACCAAAGTTGC+TGG + chr3_1:74058078-74058097 Msa0374600:CDS 40.0%
!! AGTTGCTGGTTTGAGTAAAG+TGG + chr3_1:74058092-74058111 Msa0374600:CDS 40.0%
TTGAGTAAAGTGGAAGTCCA+AGG + chr3_1:74058102-74058121 Msa0374600:CDS 40.0%
AATTCTACATCAGCATGCAG+TGG - chr3_1:74058386-74058405 None:intergenic 40.0%
GTGGATCAAGTAAAGTTCAG+TGG + chr3_1:74058457-74058476 Msa0374600:CDS 40.0%
TAAACCACTCACATGGTATC+AGG + chr3_1:74058500-74058519 Msa0374600:CDS 40.0%
ATTACCTGATACCATGTGAG+TGG - chr3_1:74058507-74058526 None:intergenic 40.0%
ACCAAGGTCTTTACGAGATT+GGG - chr3_1:74058603-74058622 None:intergenic 40.0%
AACCAAGGTCTTTACGAGAT+TGG - chr3_1:74058604-74058623 None:intergenic 40.0%
TAAGATTGGACAAGGGATGA+AGG + chr3_1:74058670-74058689 Msa0374600:intron 40.0%
!! AGTGCTTAACCTTGGTTCTA+TGG + chr3_1:74058859-74058878 Msa0374600:CDS 40.0%
!! GTGCTTAACCTTGGTTCTAT+GGG + chr3_1:74058860-74058879 Msa0374600:CDS 40.0%
!! TAACCTTGGTTCTATGGGAA+AGG + chr3_1:74058865-74058884 Msa0374600:CDS 40.0%
!! AACCTTGGTTCTATGGGAAA+GGG + chr3_1:74058866-74058885 Msa0374600:CDS 40.0%
!! CCAAGGTATTGGACGATATT+GGG + chr3_1:74058907-74058926 Msa0374600:CDS 40.0%
GTATCTTTCCACAAACCAGA+TGG + chr3_1:74058929-74058948 Msa0374600:CDS 40.0%
ATGGAACTCCTTCACAACAA+TGG + chr3_1:74058948-74058967 Msa0374600:CDS 40.0%
!! GTCGATTTTAGGAAAGAACG+TGG - chr3_1:74059396-74059415 None:intergenic 40.0%
CGTTCTTTCCTAAAATCGAC+TGG + chr3_1:74059396-74059415 Msa0374600:CDS 40.0%
! TGTCTAGAGTGATTCCTAAG+GGG - chr3_1:74059458-74059477 None:intergenic 40.0%
! GTGTCTAGAGTGATTCCTAA+GGG - chr3_1:74059459-74059478 None:intergenic 40.0%
! TGTGTCTAGAGTGATTCCTA+AGG - chr3_1:74059460-74059479 None:intergenic 40.0%
GTGAACCTGAAGCCAAATAA+TGG - chr3_1:74059601-74059620 None:intergenic 40.0%
! GCTTCAGGTTCACTCTAAAA+GGG + chr3_1:74059608-74059627 Msa0374600:intron 40.0%
TCAAAATCATGGGAGAGTGG+TGG + chr3_1:74052624-74052643 Msa0374600:exon 45.0%
TACCTACGACAGAACATCGT+TGG + chr3_1:74052709-74052728 Msa0374600:CDS 45.0%
AAAAAGAGAGGCAGAGACGA+GGG + chr3_1:74053040-74053059 Msa0374600:intron 45.0%
!! TAGTTTTGCCAAGACGGCAA+AGG - chr3_1:74053989-74054008 None:intergenic 45.0%
TGCCGTCTTGGCAAAACTAA+TGG + chr3_1:74053990-74054009 Msa0374600:intron 45.0%
ATGTTTGACGATAGAGTGGG+TGG + chr3_1:74054144-74054163 Msa0374600:intron 45.0%
AATCTTCACGAGCCTCAACA+AGG + chr3_1:74054608-74054627 Msa0374600:CDS 45.0%
TATGCACCAATGAGGTTACC+TGG - chr3_1:74054634-74054653 None:intergenic 45.0%
GTGGGACACACATGATTTAG+TGG - chr3_1:74054762-74054781 None:intergenic 45.0%
AGGACCTATCATACTATCCC+AGG + chr3_1:74055426-74055445 Msa0374600:CDS 45.0%
! ATGGGTTGCCCTATATTCGT+TGG + chr3_1:74055582-74055601 Msa0374600:CDS 45.0%
TGGGTTGCCCTATATTCGTT+GGG + chr3_1:74055583-74055602 Msa0374600:CDS 45.0%
ATGCAGATCAACGCATGCAA+TGG + chr3_1:74055850-74055869 Msa0374600:intron 45.0%
CATGCAATGGCATGCAATGT+GGG + chr3_1:74055863-74055882 Msa0374600:CDS 45.0%
!! GAAGGCTTGTTAGGAGAGTT+TGG - chr3_1:74055904-74055923 None:intergenic 45.0%
CTCCTAACAAGCCTTCACTA+TGG + chr3_1:74055908-74055927 Msa0374600:CDS 45.0%
! GTCCATAGTGAAGGCTTGTT+AGG - chr3_1:74055913-74055932 None:intergenic 45.0%
! GGCTAAGTTGAAAGAGAAGG+AGG - chr3_1:74056212-74056231 None:intergenic 45.0%
CACAGTCAGTCACGTAACAA+TGG - chr3_1:74056415-74056434 None:intergenic 45.0%
TTACGTGACTGACTGTGCTA+AGG + chr3_1:74056418-74056437 Msa0374600:intron 45.0%
TGTGCTAAGGTAACCAGGTT+TGG + chr3_1:74056431-74056450 Msa0374600:intron 45.0%
ACTCAAACCACCTTCAGCTT+AGG + chr3_1:74056531-74056550 Msa0374600:CDS 45.0%
GCTGCCTTCTTGGAAAATAG+TGG + chr3_1:74056777-74056796 Msa0374600:CDS 45.0%
AAGACTACATTCTTGCAGCC+TGG - chr3_1:74056873-74056892 None:intergenic 45.0%
CTCCATACTTAGTGCAACAG+TGG + chr3_1:74057731-74057750 Msa0374600:CDS 45.0%
TCCCACTGTTGCACTAAGTA+TGG - chr3_1:74057736-74057755 None:intergenic 45.0%
GCTCTACTAAACCACTCACA+TGG + chr3_1:74058493-74058512 Msa0374600:CDS 45.0%
AGGTCTTTACGAGATTGGGT+TGG - chr3_1:74058599-74058618 None:intergenic 45.0%
ACCCAATCTCGTAAAGACCT+TGG + chr3_1:74058599-74058618 Msa0374600:intron 45.0%
GATCCTGTAGTGCTTAACCT+TGG + chr3_1:74058851-74058870 Msa0374600:CDS 45.0%
GAACCAAGGTTAAGCACTAC+AGG - chr3_1:74058857-74058876 None:intergenic 45.0%
! TATGGGAAAGGGACTTGCTT+GGG + chr3_1:74058877-74058896 Msa0374600:CDS 45.0%
! AAGGGACTTGCTTGGGTTAA+TGG + chr3_1:74058884-74058903 Msa0374600:CDS 45.0%
TGGGTTAATGGCCAAGGTAT+TGG + chr3_1:74058896-74058915 Msa0374600:CDS 45.0%
!! GCCAAGGTATTGGACGATAT+TGG + chr3_1:74058906-74058925 Msa0374600:CDS 45.0%
CCCAATATCGTCCAATACCT+TGG - chr3_1:74058910-74058929 None:intergenic 45.0%
! AAGGAGTTCCATCTGGTTTG+TGG - chr3_1:74058940-74058959 None:intergenic 45.0%
TGTTGTGAAGGAGTTCCATC+TGG - chr3_1:74058947-74058966 None:intergenic 45.0%
!! GTAGGTTCCCAGTCGATTTT+AGG - chr3_1:74059407-74059426 None:intergenic 45.0%
! GGCTTCAGGTTCACTCTAAA+AGG + chr3_1:74059607-74059626 Msa0374600:intron 45.0%
TCTTACAAGCAAAGAGCCAC+CGG + chr3_1:74059635-74059654 Msa0374600:CDS 45.0%
!!! TATTTAATTATTTTTTTTAC+TGG + chr3_1:74053963-74053982 Msa0374600:intron 5.0%
GGTAACATTGCCACCATGGA+CGG - chr3_1:74052693-74052712 None:intergenic 50.0%
CGTAGGTAACATTGCCACCA+TGG - chr3_1:74052697-74052716 None:intergenic 50.0%
GACCAACGATGTTCTGTCGT+AGG - chr3_1:74052714-74052733 None:intergenic 50.0%
GAAAAAGAGAGGCAGAGACG+AGG + chr3_1:74053039-74053058 Msa0374600:intron 50.0%
! TCATTGATGGCAACTGCCAG+TGG + chr3_1:74053648-74053667 Msa0374600:intron 50.0%
GTACACACAAGTGATGCCAC+TGG - chr3_1:74053667-74053686 None:intergenic 50.0%
!! TTTACTGGCCTTTGCCGTCT+TGG + chr3_1:74053978-74053997 Msa0374600:intron 50.0%
ACAAGGCCAGGTAACCTCAT+TGG + chr3_1:74054625-74054644 Msa0374600:intron 50.0%
GCTGTAGGGGTCTACCATTA+TGG + chr3_1:74055184-74055203 Msa0374600:intron 50.0%
TGGGCAGCCCAACGAATATA+GGG - chr3_1:74055593-74055612 None:intergenic 50.0%
TTGGGCAGCCCAACGAATAT+AGG - chr3_1:74055594-74055613 None:intergenic 50.0%
TATTCGTTGGGCTGCCCAAA+TGG + chr3_1:74055595-74055614 Msa0374600:CDS 50.0%
TTGAAGTCCCACGGCCATTT+GGG - chr3_1:74055612-74055631 None:intergenic 50.0%
! TTTGAAGTCCCACGGCCATT+TGG - chr3_1:74055613-74055632 None:intergenic 50.0%
ACACATCATCCAAGGCACAC+CGG - chr3_1:74055636-74055655 None:intergenic 50.0%
AGATGATGCTCCTGATCCAG+TGG + chr3_1:74055661-74055680 Msa0374600:CDS 50.0%
GAAAGACTGACCACTGGATC+AGG - chr3_1:74055674-74055693 None:intergenic 50.0%
GCATGCAATGGCATGCAATG+TGG + chr3_1:74055862-74055881 Msa0374600:CDS 50.0%
GAGGCTCCACTGGATGAATA+TGG + chr3_1:74056344-74056363 Msa0374600:CDS 50.0%
CTGACTGTGCTAAGGTAACC+AGG + chr3_1:74056426-74056445 Msa0374600:intron 50.0%
CAAGAAGGCAGCACATTCTG+TGG - chr3_1:74056769-74056788 None:intergenic 50.0%
CACAGAATGTGCTGCCTTCT+TGG + chr3_1:74056767-74056786 Msa0374600:CDS 50.0%
CTACATTCTTGCAGCCTGGT+AGG - chr3_1:74056869-74056888 None:intergenic 50.0%
TGTAGTCTTCAACACCGGCA+AGG + chr3_1:74056884-74056903 Msa0374600:CDS 50.0%
TAGTGCAACAGTGGGATTGC+CGG + chr3_1:74057740-74057759 Msa0374600:CDS 50.0%
ACTACAGGATCATTGCCAGC+TGG - chr3_1:74058842-74058861 None:intergenic 50.0%
GTCCCTTTCCCATAGAACCA+AGG - chr3_1:74058871-74058890 None:intergenic 50.0%
! CTATGGGAAAGGGACTTGCT+TGG + chr3_1:74058876-74058895 Msa0374600:CDS 50.0%
CTTGCTTGGGTTAATGGCCA+AGG + chr3_1:74058890-74058909 Msa0374600:CDS 50.0%
AGTGATTCCTAAGGGGTTCC+CGG - chr3_1:74059451-74059470 None:intergenic 50.0%
GTGTCTCTTTGCACCGTCCA+TGG + chr3_1:74052677-74052696 Msa0374600:CDS 55.0%
TCTCTTTGCACCGTCCATGG+TGG + chr3_1:74052680-74052699 Msa0374600:CDS 55.0%
CTATCCTCGTAGCACTCCTC+AGG + chr3_1:74052775-74052794 Msa0374600:CDS 55.0%
!! GAGGTTACCTGGCCTTGTTG+AGG - chr3_1:74054623-74054642 None:intergenic 55.0%
ATGGCCGTGGGACTTCAAAC+CGG + chr3_1:74055614-74055633 Msa0374600:CDS 55.0%
!! CACACCGGTTTGAAGTCCCA+CGG - chr3_1:74055621-74055640 None:intergenic 55.0%
GACTTCAAACCGGTGTGCCT+TGG + chr3_1:74055624-74055643 Msa0374600:CDS 55.0%
CTGTGAGCCTAAGCTGAAGG+TGG - chr3_1:74056541-74056560 None:intergenic 55.0%
ACCACATTCGATGCACCAGC+TGG + chr3_1:74058824-74058843 Msa0374600:CDS 55.0%
GAAGAAACCGGGAACCCCTT+AGG + chr3_1:74059441-74059460 Msa0374600:CDS 55.0%
!! CGTACCTGAGGAGTGCTACG+AGG - chr3_1:74052782-74052801 None:intergenic 60.0%
AAGAGAGGCAGAGACGAGGG+AGG + chr3_1:74053043-74053062 Msa0374600:intron 60.0%
AGAGAGGCAGAGACGAGGGA+GGG + chr3_1:74053044-74053063 Msa0374600:intron 60.0%
TCACGAGCCTCAACAAGGCC+AGG + chr3_1:74054613-74054632 Msa0374600:CDS 60.0%
GCCAGCTGGTGCATCGAATG+TGG - chr3_1:74058828-74058847 None:intergenic 60.0%
TTGGGCTGCCCAAATGGCCG+TGG + chr3_1:74055601-74055620 Msa0374600:CDS 65.0%
TGGGCTGCCCAAATGGCCGT+GGG + chr3_1:74055602-74055621 Msa0374600:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 74052561 74059662 74052561 ID=Msa0374600;Name=Msa0374600
chr3_1 mRNA 74052561 74059662 74052561 ID=Msa0374600-mRNA-1;Parent=Msa0374600;Name=Msa0374600-mRNA-1;_AED=0.06;_eAED=0.06;_QI=71|0.38|0.31|1|1|1|19|0|704
chr3_1 exon 74052561 74052796 74052561 ID=Msa0374600-mRNA-1:exon:16976;Parent=Msa0374600-mRNA-1
chr3_1 exon 74054539 74054634 74054539 ID=Msa0374600-mRNA-1:exon:16977;Parent=Msa0374600-mRNA-1
chr3_1 exon 74054945 74055057 74054945 ID=Msa0374600-mRNA-1:exon:16978;Parent=Msa0374600-mRNA-1
chr3_1 exon 74055191 74055257 74055191 ID=Msa0374600-mRNA-1:exon:16979;Parent=Msa0374600-mRNA-1
chr3_1 exon 74055355 74055447 74055355 ID=Msa0374600-mRNA-1:exon:16980;Parent=Msa0374600-mRNA-1
chr3_1 exon 74055539 74055682 74055539 ID=Msa0374600-mRNA-1:exon:16981;Parent=Msa0374600-mRNA-1
chr3_1 exon 74055856 74055950 74055856 ID=Msa0374600-mRNA-1:exon:16982;Parent=Msa0374600-mRNA-1
chr3_1 exon 74056079 74056184 74056079 ID=Msa0374600-mRNA-1:exon:16983;Parent=Msa0374600-mRNA-1
chr3_1 exon 74056281 74056365 74056281 ID=Msa0374600-mRNA-1:exon:16984;Parent=Msa0374600-mRNA-1
chr3_1 exon 74056448 74056566 74056448 ID=Msa0374600-mRNA-1:exon:16985;Parent=Msa0374600-mRNA-1
chr3_1 exon 74056747 74056905 74056747 ID=Msa0374600-mRNA-1:exon:16986;Parent=Msa0374600-mRNA-1
chr3_1 exon 74057081 74057262 74057081 ID=Msa0374600-mRNA-1:exon:16987;Parent=Msa0374600-mRNA-1
chr3_1 exon 74057384 74057475 74057384 ID=Msa0374600-mRNA-1:exon:16988;Parent=Msa0374600-mRNA-1
chr3_1 exon 74057652 74057761 74057652 ID=Msa0374600-mRNA-1:exon:16989;Parent=Msa0374600-mRNA-1
chr3_1 exon 74058066 74058158 74058066 ID=Msa0374600-mRNA-1:exon:16990;Parent=Msa0374600-mRNA-1
chr3_1 exon 74058417 74058521 74058417 ID=Msa0374600-mRNA-1:exon:16991;Parent=Msa0374600-mRNA-1
chr3_1 exon 74058824 74058969 74058824 ID=Msa0374600-mRNA-1:exon:16992;Parent=Msa0374600-mRNA-1
chr3_1 exon 74059383 74059479 74059383 ID=Msa0374600-mRNA-1:exon:16993;Parent=Msa0374600-mRNA-1
chr3_1 exon 74059615 74059662 74059615 ID=Msa0374600-mRNA-1:exon:16994;Parent=Msa0374600-mRNA-1
chr3_1 five_prime_UTR 74052561 74052631 74052561 ID=Msa0374600-mRNA-1:five_prime_utr;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74052632 74052796 74052632 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74054539 74054634 74054539 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74054945 74055057 74054945 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74055191 74055257 74055191 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74055355 74055447 74055355 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74055539 74055682 74055539 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74055856 74055950 74055856 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74056079 74056184 74056079 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74056281 74056365 74056281 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74056448 74056566 74056448 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74056747 74056905 74056747 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74057081 74057262 74057081 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74057384 74057475 74057384 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74057652 74057761 74057652 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74058066 74058158 74058066 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74058417 74058521 74058417 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74058824 74058969 74058824 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74059383 74059479 74059383 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
chr3_1 CDS 74059615 74059662 74059615 ID=Msa0374600-mRNA-1:cds;Parent=Msa0374600-mRNA-1
Gene Sequence

>Msa0374600

ATGGGAGAGTGGTGGCGTTTTTTATTACATGCACTTATTTTAACAGTGTCTCTTTGCACCGTCCATGGTGGCAATGTTACCTACGACAGAACATCGTTGGTCATTAACGGCCATCATAAAATCCTCTTCTCTGGTTCAATTCACTATCCTCGTAGCACTCCTCAGATGTGGCCTGACTTAATTTCCAAAGCCAAAGAAGGAGGATTAGATGTCATACAAACTTACGTGTTTTGGAATCTTCACGAGCCTCAACAAGGCCAGTATGAGTTTAGTGGAAGGTTTGATTTAGTGGGATTCATTAAAGAAATTCAAGCTCAAGGTTTATATGTGACCCTTCGAATTGGACCATACATTGAGAGTGAATGCACTTATGGGGGTCTACCATTATGGTTACATGATGTTCCTGGAATTGTATTTAGAAGTGATAATGATCAATTCAAGTTTCACATGCAAAGATTCACTACCAAAATAGTCAACATGATGAAATCAGCCAATCTTTTTGCTTCACAAGGAGGACCTATCATACTATCCCAGATTGAGAATGAATATGGCAGCATTCAAAGTAAGTTTCGAGAGAATGGGTTGCCCTATATTCGTTGGGCTGCCCAAATGGCCGTGGGACTTCAAACCGGTGTGCCTTGGATGATGTGTAAACAAGATGATGCTCCTGATCCAGTGATCAACGCATGCAATGGCATGCAATGTGGGAGAAACTTTAAGGGGCCAAACTCTCCTAACAAGCCTTCACTATGGACAGAGAATTGGACTAGCTTTTTACAAGCTTTTGGTGGAGCACCATACTTGAGATCAGCTTCAGACATTGCCTATAATGTTGCCTTGTTCATAGCAAAGAAAGGAAGTTATGTCAATTATTACATGTACCATGGAGGAACTAATTTTGATAGATTGGCCTCTGCTTTCATAATAACAGCTTATTATGATGAGGCTCCACTGGATGAATATGGTTTGGTTAGACAACCAAAATGGGGACATCTTAAGGAGCTACATGCTGCAATCAAGTCATGTTCACAACCTCTACTTGATGGAACTCAAACCACCTTCAGCTTAGGCTCACAGCAACAAGCTTATGTTTTCAGAAGTTCCACAGAATGTGCTGCCTTCTTGGAAAATAGTGGACCTAGGGATGTAACAATCCAATTTCAAAATATTTCGTATGAATTGCCTGGGAAATCAATGAGTATCCTACCAGGCTGCAAGAATGTAGTCTTCAACACCGGCAAGGTGAGTATACAGAATAATGCCAGAGCAATGAAACCACAATTAAAGTTCAATTCAGCTGAAAATTGGAAAGTGTATACAGAAGCCATCCCTAATTTTGCCGATACTTCAAAAAGAGCAGACACATTATTAGATCAAATCAGCACAGCAAAAGATACATCTGACTATATGTGGTACACTTTCAGGTTTAATAACAAATCTCCTAATGCACAATCTGTTCTTAGTATATACAGTCAAGGACATGTTTTGCATTCTTTCGTCAATGGAGTTTTAACAGGTTCTGCACATGGAAGTCGCAACAATACGCAAGTTACAATGGAGAAAAATGTCAATCTGATAAACGGGATGAACAACATCTCCATACTTAGTGCAACAGTGGGATTGCCGAACTCGGGAGCATTTCTAGAGACCAAAGTTGCTGGTTTGAGTAAAGTGGAAGTCCAAGGAAGAGATTTCAGTAATTACTCATGGGGATATCAGGTTGGGTTGTTAGGAGAAAAATTGCAAATCTATTCAGTCAGTGGATCAAGTAAAGTTCAGTGGAAAAGTTTTCAAAGCTCTACTAAACCACTCACATGGTATCAGACCACATTCGATGCACCAGCTGGCAATGATCCTGTAGTGCTTAACCTTGGTTCTATGGGAAAGGGACTTGCTTGGGTTAATGGCCAAGGTATTGGACGATATTGGGTATCTTTCCACAAACCAGATGGAACTCCTTCACAACAATGGTATCACATACCACGTTCTTTCCTAAAATCGACTGGGAACCTACTTGTTATACTTGAAGAAGAAACCGGGAACCCCTTAGGAATCACTCTAGACACAGTTCACTCTAAAAGGGTTTATCTTACAAGCAAAGAGCCACCGGTATAG
Protein sequence

>Msa0374600

MGEWWRFLLHALILTVSLCTVHGGNVTYDRTSLVINGHHKILFSGSIHYPRSTPQMWPDLISKAKEGGLDVIQTYVFWNLHEPQQGQYEFSGRFDLVGFIKEIQAQGLYVTLRIGPYIESECTYGGLPLWLHDVPGIVFRSDNDQFKFHMQRFTTKIVNMMKSANLFASQGGPIILSQIENEYGSIQSKFRENGLPYIRWAAQMAVGLQTGVPWMMCKQDDAPDPVINACNGMQCGRNFKGPNSPNKPSLWTENWTSFLQAFGGAPYLRSASDIAYNVALFIAKKGSYVNYYMYHGGTNFDRLASAFIITAYYDEAPLDEYGLVRQPKWGHLKELHAAIKSCSQPLLDGTQTTFSLGSQQQAYVFRSSTECAAFLENSGPRDVTIQFQNISYELPGKSMSILPGCKNVVFNTGKVSIQNNARAMKPQLKFNSAENWKVYTEAIPNFADTSKRADTLLDQISTAKDTSDYMWYTFRFNNKSPNAQSVLSIYSQGHVLHSFVNGVLTGSAHGSRNNTQVTMEKNVNLINGMNNISILSATVGLPNSGAFLETKVAGLSKVEVQGRDFSNYSWGYQVGLLGEKLQIYSVSGSSKVQWKSFQSSTKPLTWYQTTFDAPAGNDPVVLNLGSMGKGLAWVNGQGIGRYWVSFHKPDGTPSQQWYHIPRSFLKSTGNLLVILEEETGNPLGITLDTVHSKRVYLTSKEPPV*