AlfalfaGEDB | Msa0796490

M. sativa cultivar zhongmu-4 / Msa0796490

KEGG: K02951
GO: -
PFAM: PF01248.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0796490	XP_003611335.1	99.296	142	1	0	1	142	1	142	2.66e-97	286

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0796490	sp\|Q9XHS0\|RS12_HORVU	72.727	143	38	1	1	142	1	143	8.99e-70	209

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0796490	G7JXD6	99.296	142	1	0	1	142	1	142	1.27e-97	286

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0086160	Msa0796490	0.809245	2.081238e-50	-8.615850e-47
Msa0087910	Msa0796490	0.846413	2.206328e-59	-8.615850e-47
Msa0114600	Msa0796490	0.883708	3.569237e-71	-8.615850e-47
Msa0602900	Msa0796490	0.829160	6.013855e-55	-8.615850e-47
Msa0605890	Msa0796490	0.849761	2.628173e-60	-8.615850e-47
Msa0643960	Msa0796490	0.826274	2.967588e-54	-8.615850e-47
Msa0663400	Msa0796490	0.873187	1.786243e-67	-8.615850e-47
Msa0686550	Msa0796490	0.813764	2.169787e-51	-8.615850e-47
Msa0694400	Msa0796490	0.832757	7.879771e-56	-8.615850e-47
Msa0715970	Msa0796490	0.816318	5.881834e-52	-8.615850e-47
Msa0749000	Msa0796490	0.988593	1.245026e-174	-8.615850e-47
Msa0796490	Msa0835190	0.826857	2.154456e-54	-8.615850e-47
Msa0796490	Msa0902730	0.819765	9.778031e-53	-8.615850e-47
Msa0796490	Msa0929700	0.863704	2.058407e-64	-8.615850e-47
Msa0796490	Msa0930890	0.866083	3.694113e-65	-8.615850e-47
Msa0796490	Msa0978470	0.849515	3.077552e-60	-8.615850e-47
Msa0796490	Msa1004780	0.811371	7.238937e-51	-8.615850e-47
Msa0796490	Msa1079910	0.815701	8.077803e-52	-8.615850e-47
Msa0796490	Msa1079920	0.833839	4.235682e-56	-8.615850e-47
Msa0796490	Msa1093500	0.825957	3.530822e-54	-8.615850e-47
Msa0796490	Msa1124850	0.823813	1.131450e-53	-8.615850e-47
Msa0796490	Msa1164150	0.810017	1.420470e-50	-8.615850e-47
Msa0796490	Msa1169180	0.816639	4.984313e-52	-8.615850e-47
Msa0796490	Msa1180000	0.821434	4.045721e-53	-8.615850e-47
Msa0796490	Msa1208330	0.866907	2.022467e-65	-8.615850e-47
Msa0796490	Msa1270640	0.826014	3.423023e-54	-8.615850e-47
Msa0796490	Msa1270710	0.824493	7.832794e-54	-8.615850e-47
Msa0796490	Msa1330730	0.847433	1.159951e-59	-8.615850e-47
Msa0796490	Msa1341780	0.840143	1.038098e-57	-8.615850e-47
Msa0796490	Msa1344160	0.804908	1.723733e-49	-8.615850e-47
Msa0796490	Msa1351020	0.823292	1.498380e-53	-8.615850e-47
Msa0796490	Msa1351910	0.829692	4.464088e-55	-8.615850e-47
Msa0796490	Msa1353300	0.823951	1.050634e-53	-8.615850e-47
Msa0796490	Msa1385480	0.843735	1.166805e-58	-8.615850e-47
Msa0796490	Msa1446410	0.814595	1.421949e-51	-8.615850e-47
Msa0796490	Msa1463570	0.827598	1.432104e-54	-8.615850e-47
Msa0128330	Msa0796490	0.832364	9.861769e-56	-8.615850e-47
Msa0134580	Msa0796490	0.821492	3.923004e-53	-8.615850e-47
Msa0136400	Msa0796490	0.802437	5.613964e-49	-8.615850e-47
Msa0167860	Msa0796490	0.864737	9.804686e-65	-8.615850e-47
Msa0174580	Msa0796490	0.836298	1.015545e-56	-8.615850e-47
Msa0191550	Msa0796490	0.810817	9.545222e-51	-8.615850e-47
Msa0194940	Msa0796490	0.843958	1.016947e-58	-8.615850e-47
Msa0225350	Msa0796490	0.818570	1.829446e-52	-8.615850e-47
Msa0235050	Msa0796490	0.827113	1.871546e-54	-8.615850e-47
Msa0377370	Msa0796490	0.807886	4.059662e-50	-8.615850e-47
Msa0419710	Msa0796490	0.861334	1.103818e-63	-8.615850e-47
Msa0426090	Msa0796490	0.802643	5.089610e-49	-8.615850e-47
Msa0426250	Msa0796490	0.851640	7.781448e-61	-8.615850e-47
Msa0450150	Msa0796490	0.865359	6.253202e-65	-8.615850e-47
Msa0468440	Msa0796490	0.813934	1.990450e-51	-8.615850e-47
Msa0481520	Msa0796490	0.817433	3.306319e-52	-8.615850e-47
Msa0277600	Msa0796490	0.857210	1.905758e-62	-8.615850e-47
Msa0281330	Msa0796490	0.806899	6.574719e-50	-8.615850e-47
Msa0281370	Msa0796490	0.804967	1.675313e-49	-8.615850e-47
Msa0312210	Msa0796490	0.808434	3.103041e-50	-8.615850e-47
Msa0313060	Msa0796490	0.828128	1.067736e-54	-8.615850e-47
Msa0313520	Msa0796490	0.803255	3.803558e-49	-8.615850e-47
Msa0315430	Msa0796490	0.854002	1.644190e-61	-8.615850e-47
Msa0341880	Msa0796490	0.822890	1.859273e-53	-8.615850e-47
Msa0529900	Msa0796490	0.850917	1.245321e-60	-8.615850e-47
Msa0547920	Msa0796490	0.831346	1.758456e-55	-8.615850e-47
Msa0554210	Msa0796490	0.812750	3.623367e-51	-8.615850e-47
Msa0573550	Msa0796490	0.859540	3.853352e-63	-8.615850e-47
Msa0579830	Msa0796490	0.813149	2.961624e-51	-8.615850e-47
Msa0585570	Msa0796490	0.871776	5.281007e-67	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0796490	MtrunA17_Chr5g0399411	99.296	142	1	0	1	142	1	142	2.44e-101	286
Msa0796490	MtrunA17_Chr8g0384331	94.444	126	7	0	17	142	18	143	1.83e-86	248
Msa0796490	MtrunA17_Chr4g0001281	94.444	126	7	0	17	142	19	144	2.46e-85	246
Msa0796490	MtrunA17_Chr4g0037191	71.429	56	14	1	1	54	51	106	1.98e-19	78.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0796490	AT2G32060.3	74.400	125	31	1	18	142	21	144	1.38e-66	199
Msa0796490	AT2G32060.1	74.400	125	31	1	18	142	21	144	1.38e-66	199
Msa0796490	AT2G32060.2	74.400	125	31	1	18	142	21	144	1.38e-66	199
Msa0796490	AT1G15930.1	74.400	125	31	1	18	142	21	144	5.53e-64	192
Msa0796490	AT1G15930.2	74.400	125	31	1	18	142	21	144	5.53e-64	192

Find 54 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACATACCCTGACATATTTCT+TGG	0.238476	5_3:-8536197	None:intergenic
TTCACCAATTTGACATAATC+AGG	0.268051	5_3:-8537354	None:intergenic
GTTGTTGCTGCTGCAATTCC+AGG	0.269519	5_3:+8537183	Msa0796490:CDS
TTAGTATTAATTGGAAAAGT+AGG	0.335008	5_3:+8535996	Msa0796490:five_prime_UTR
GATGCTCTTGTGTGGTTGTC+AGG	0.354575	5_3:+8537673	Msa0796490:CDS
ACCAGCTGGATGCGATTTGC+AGG	0.362694	5_3:-8536070	None:intergenic
ATGCTGCAAAACAACATTGT+AGG	0.363171	5_3:-8537809	None:intergenic
CATAAGCACGAGACTTTCTA+AGG	0.363450	5_3:-8537242	None:intergenic
CCAACCTGATTATGTCAAAT+TGG	0.373462	5_3:+8537350	Msa0796490:CDS
CTTAGAAAGTCTCGTGCTTA+TGG	0.383982	5_3:+8537243	Msa0796490:CDS
ATCAGGTTGGTCACAATCTT+CGG	0.412966	5_3:-8537337	None:intergenic
ATGATGTCCATTGGCTCGCC+TGG	0.437864	5_3:-8537201	None:intergenic
TAATCTTTATATAATACAAA+AGG	0.440620	5_3:-8535964	None:intergenic
TTGCAGGAAGGCGGAGATAG+AGG	0.453615	5_3:-8536054	None:intergenic
TAGTATTAATTGGAAAAGTA+GGG	0.458684	5_3:+8535997	Msa0796490:five_prime_UTR
TCTCCAAGGGTCTTTGCACT+TGG	0.459795	5_3:-8537417	None:intergenic
TATCAACCAAGAAATATGTC+AGG	0.459989	5_3:+8536191	Msa0796490:exon
GGAATTGCAGCAGCAACAAC+AGG	0.463311	5_3:-8537180	None:intergenic
CCTTTATGAAGTATCTGCTA+AGG	0.472954	5_3:+8537913	Msa0796490:three_prime_UTR
CCTTAGCAGATACTTCATAA+AGG	0.476358	5_3:-8537913	None:intergenic
GGTAAAGCTAGGAAGGTTAC+CGG	0.476827	5_3:+8537651	Msa0796490:CDS
CTTGGTTGATATAAAAGAGA+TGG	0.487724	5_3:-8536179	None:intergenic
AAGTCAACTTTCTTGATCAA+AGG	0.499592	5_3:+8535853	None:intergenic
AACATTGTGCTCTGCGCAGA+GGG	0.503587	5_3:-8537379	None:intergenic
CAGAGAGGGTTTCAATTCGA+TGG	0.508374	5_3:-8536029	None:intergenic
CTTTATGAAGTATCTGCTAA+GGG	0.521301	5_3:+8537914	Msa0796490:three_prime_UTR
GACAACCACACAAGAGCATC+CGG	0.522597	5_3:-8537670	None:intergenic
TCCTGCAAATCGCATCCAGC+TGG	0.522745	5_3:+8536069	Msa0796490:five_prime_UTR
TTACGCCAGCCCACTCTCCA+AGG	0.529322	5_3:-8537431	None:intergenic
CCAATTTGACATAATCAGGT+TGG	0.530247	5_3:-8537350	None:intergenic
TGCAAAGACCCTTGGAGAGT+GGG	0.530356	5_3:+8537422	Msa0796490:CDS
TTTGTTATGCAGTGAAGAAG+AGG	0.537025	5_3:+8537143	Msa0796490:intron
GTTCCAAGTGCAAAGACCCT+TGG	0.537039	5_3:+8537414	Msa0796490:CDS
AAGACCCTTGGAGAGTGGGC+TGG	0.538691	5_3:+8537426	Msa0796490:CDS
TTGATTCAGAAGGTAAAGCT+AGG	0.543764	5_3:+8537640	Msa0796490:CDS
TTCAGAAGGTAAAGCTAGGA+AGG	0.557714	5_3:+8537644	Msa0796490:CDS
GCTGGATGCGATTTGCAGGA+AGG	0.568086	5_3:-8536066	None:intergenic
TGCAATTCCAGGCGAGCCAA+TGG	0.568250	5_3:+8537194	Msa0796490:CDS
GTGCAAAGACCCTTGGAGAG+TGG	0.569975	5_3:+8537421	Msa0796490:CDS
ATGCTCTTGTGTGGTTGTCA+GGG	0.586706	5_3:+8537674	Msa0796490:CDS
AAAGCAGTCATGATGTCCAT+TGG	0.589394	5_3:-8537210	None:intergenic
CGGAGATAGAGGCACAGAGA+GGG	0.597269	5_3:-8536043	None:intergenic
CTTGCACGAGGTCTTCATGA+AGG	0.605005	5_3:+8537270	Msa0796490:CDS
AGAAAGTCTCGTGCTTATGG+TGG	0.620799	5_3:+8537246	Msa0796490:CDS
TTGTGCAAGATTGATTCAGA+AGG	0.623879	5_3:+8537630	Msa0796490:CDS
TACGCCAGCCCACTCTCCAA+GGG	0.624257	5_3:-8537430	None:intergenic
GCTTATGGTGGTCTTGCACG+AGG	0.624672	5_3:+8537258	Msa0796490:CDS
TAACATTGTGCTCTGCGCAG+AGG	0.632440	5_3:-8537380	None:intergenic
TAAATGCTAGAAGCAAAATG+AGG	0.636677	5_3:+8535911	Msa0796490:five_prime_UTR
ATCAACCAAGAAATATGTCA+GGG	0.636797	5_3:+8536192	Msa0796490:exon
GGTTACCGGATGCTCTTGTG+TGG	0.638821	5_3:+8537665	Msa0796490:CDS
GCGGAGATAGAGGCACAGAG+AGG	0.671978	5_3:-8536044	None:intergenic
GGATGCGATTTGCAGGAAGG+CGG	0.685140	5_3:-8536063	None:intergenic
TCTATGAGCATAAGTACACG+TGG	0.736186	5_3:-8535936	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATCTTTATATAATACAAA+AGG	-	chr5_3:8535967-8535986	None:intergenic	10.0%
!!	TAATCTTTATATAATACAAA+AGG	-	chr5_3:8535967-8535986	None:intergenic	10.0%
!!	AAAAAAACGTTAGTATTAAT+TGG	+	chr5_3:8535987-8536006	Msa0796490:five_prime_UTR	15.0%
!!!	ATTCTTCTATTTATATGTTT+TGG	+	chr5_3:8537044-8537063	Msa0796490:intron	15.0%
!!	AAAGTTCACAATATAAATTT+GGG	-	chr5_3:8537519-8537538	None:intergenic	15.0%
!!	AAAAGTTCACAATATAAATT+TGG	-	chr5_3:8537520-8537539	None:intergenic	15.0%
!!	AAAAAAACGTTAGTATTAAT+TGG	+	chr5_3:8535987-8536006	Msa0796490:five_prime_UTR	15.0%
!!!	ATTCTTCTATTTATATGTTT+TGG	+	chr5_3:8537044-8537063	Msa0796490:intron	15.0%
!!	AAAGTTCACAATATAAATTT+GGG	-	chr5_3:8537519-8537538	None:intergenic	15.0%
!!	AAAAGTTCACAATATAAATT+TGG	-	chr5_3:8537520-8537539	None:intergenic	15.0%
!!	TTAGTATTAATTGGAAAAGT+AGG	+	chr5_3:8535996-8536015	Msa0796490:five_prime_UTR	20.0%
!!	TAGTATTAATTGGAAAAGTA+GGG	+	chr5_3:8535997-8536016	Msa0796490:five_prime_UTR	20.0%
!!	TTCAAATGCAATTGTAATTT+AGG	+	chr5_3:8536258-8536277	Msa0796490:intron	20.0%
!!!	ATTTATTTTTTCTTTTGCTG+TGG	-	chr5_3:8536334-8536353	None:intergenic	20.0%
!!!	TGGAAAGAATTGTTTTTTTT+AGG	+	chr5_3:8536565-8536584	Msa0796490:intron	20.0%
!!!	GGAAAGAATTGTTTTTTTTA+GGG	+	chr5_3:8536566-8536585	Msa0796490:intron	20.0%
!!!	GAAAGAATTGTTTTTTTTAG+GGG	+	chr5_3:8536567-8536586	Msa0796490:intron	20.0%
!!!	AAAGAATTGTTTTTTTTAGG+GGG	+	chr5_3:8536568-8536587	Msa0796490:intron	20.0%
!!	TTTGCATAAGCTAAAAAAAT+AGG	-	chr5_3:8536642-8536661	None:intergenic	20.0%
!!	ATTACTTGTAGTTATTACTA+AGG	-	chr5_3:8536932-8536951	None:intergenic	20.0%
!!!	TAAAGATTTTTAAACTTGCA+AGG	-	chr5_3:8537097-8537116	None:intergenic	20.0%
!!	ACAATATAAATTTGGGAATT+GGG	-	chr5_3:8537512-8537531	None:intergenic	20.0%
!!	TTAGTATTAATTGGAAAAGT+AGG	+	chr5_3:8535996-8536015	Msa0796490:five_prime_UTR	20.0%
!!	TAGTATTAATTGGAAAAGTA+GGG	+	chr5_3:8535997-8536016	Msa0796490:five_prime_UTR	20.0%
!!	TTCAAATGCAATTGTAATTT+AGG	+	chr5_3:8536258-8536277	Msa0796490:intron	20.0%
!!!	ATTTATTTTTTCTTTTGCTG+TGG	-	chr5_3:8536334-8536353	None:intergenic	20.0%
!!!	TGGAAAGAATTGTTTTTTTT+AGG	+	chr5_3:8536565-8536584	Msa0796490:intron	20.0%
!!!	GGAAAGAATTGTTTTTTTTA+GGG	+	chr5_3:8536566-8536585	Msa0796490:intron	20.0%
!!!	GAAAGAATTGTTTTTTTTAG+GGG	+	chr5_3:8536567-8536586	Msa0796490:intron	20.0%
!!!	AAAGAATTGTTTTTTTTAGG+GGG	+	chr5_3:8536568-8536587	Msa0796490:intron	20.0%
!!	TTTGCATAAGCTAAAAAAAT+AGG	-	chr5_3:8536642-8536661	None:intergenic	20.0%
!!	ATTACTTGTAGTTATTACTA+AGG	-	chr5_3:8536932-8536951	None:intergenic	20.0%
!!!	TAAAGATTTTTAAACTTGCA+AGG	-	chr5_3:8537097-8537116	None:intergenic	20.0%
!!	ACAATATAAATTTGGGAATT+GGG	-	chr5_3:8537512-8537531	None:intergenic	20.0%
!!	CATTGCAAAAAATTTGTTTG+AGG	+	chr5_3:8535883-8535902	Msa0796490:five_prime_UTR	25.0%
!	AATTCCTGCATAAAACAAAA+TGG	-	chr5_3:8536154-8536173	None:intergenic	25.0%
!	AACTTATGAAAACAGCTTAT+GGG	-	chr5_3:8536376-8536395	None:intergenic	25.0%
!	TTGCAACATAAAGTAAACTT+AGG	+	chr5_3:8536537-8536556	Msa0796490:intron	25.0%
!	TGCAACATAAAGTAAACTTA+GGG	+	chr5_3:8536538-8536557	Msa0796490:intron	25.0%
!!	AATAGGCTTAATTACACTTT+TGG	-	chr5_3:8536625-8536644	None:intergenic	25.0%
!	CAAAAATAAGACAATGCAAA+CGG	+	chr5_3:8536802-8536821	Msa0796490:intron	25.0%
!	AAAAATAAGACAATGCAAAC+GGG	+	chr5_3:8536803-8536822	Msa0796490:intron	25.0%
!	ATCTTAAACGATAAAACTAC+GGG	-	chr5_3:8536846-8536865	None:intergenic	25.0%
!	GATCTTAAACGATAAAACTA+CGG	-	chr5_3:8536847-8536866	None:intergenic	25.0%
!!	AATGTATAGAACTTTTTACC+AGG	-	chr5_3:8537027-8537046	None:intergenic	25.0%
!	AAAACTAGGTTAAGAATCAA+GGG	-	chr5_3:8537460-8537479	None:intergenic	25.0%
!	TAAAACTAGGTTAAGAATCA+AGG	-	chr5_3:8537461-8537480	None:intergenic	25.0%
!	CACAATATAAATTTGGGAAT+TGG	-	chr5_3:8537513-8537532	None:intergenic	25.0%
!	TTAGCATGAAAAAAGACAAT+AGG	-	chr5_3:8537728-8537747	None:intergenic	25.0%
!	TCCTGCAAACAAAAAAAAAA+GGG	-	chr5_3:8537769-8537788	None:intergenic	25.0%
!	ATCCTGCAAACAAAAAAAAA+AGG	-	chr5_3:8537770-8537789	None:intergenic	25.0%
!!!	TTTTTTTGTTTGCAGGATTT+TGG	+	chr5_3:8537772-8537791	Msa0796490:intron	25.0%
!!!	TTTTTTGTTTGCAGGATTTT+GGG	+	chr5_3:8537773-8537792	Msa0796490:intron	25.0%
!!!	GGATTTTGATGTTTTTATGA+TGG	+	chr5_3:8537935-8537954	Msa0796490:three_prime_UTR	25.0%
!!	CATTGCAAAAAATTTGTTTG+AGG	+	chr5_3:8535883-8535902	Msa0796490:five_prime_UTR	25.0%
!	AATTCCTGCATAAAACAAAA+TGG	-	chr5_3:8536154-8536173	None:intergenic	25.0%
!	AACTTATGAAAACAGCTTAT+GGG	-	chr5_3:8536376-8536395	None:intergenic	25.0%
!	TTGCAACATAAAGTAAACTT+AGG	+	chr5_3:8536537-8536556	Msa0796490:intron	25.0%
!	TGCAACATAAAGTAAACTTA+GGG	+	chr5_3:8536538-8536557	Msa0796490:intron	25.0%
!!	AATAGGCTTAATTACACTTT+TGG	-	chr5_3:8536625-8536644	None:intergenic	25.0%
!	CAAAAATAAGACAATGCAAA+CGG	+	chr5_3:8536802-8536821	Msa0796490:intron	25.0%
!	AAAAATAAGACAATGCAAAC+GGG	+	chr5_3:8536803-8536822	Msa0796490:intron	25.0%
!	ATCTTAAACGATAAAACTAC+GGG	-	chr5_3:8536846-8536865	None:intergenic	25.0%
!	GATCTTAAACGATAAAACTA+CGG	-	chr5_3:8536847-8536866	None:intergenic	25.0%
!!	AATGTATAGAACTTTTTACC+AGG	-	chr5_3:8537027-8537046	None:intergenic	25.0%
!	AAAACTAGGTTAAGAATCAA+GGG	-	chr5_3:8537460-8537479	None:intergenic	25.0%
!	TAAAACTAGGTTAAGAATCA+AGG	-	chr5_3:8537461-8537480	None:intergenic	25.0%
!	CACAATATAAATTTGGGAAT+TGG	-	chr5_3:8537513-8537532	None:intergenic	25.0%
!	TTAGCATGAAAAAAGACAAT+AGG	-	chr5_3:8537728-8537747	None:intergenic	25.0%
!	TCCTGCAAACAAAAAAAAAA+GGG	-	chr5_3:8537769-8537788	None:intergenic	25.0%
!	ATCCTGCAAACAAAAAAAAA+AGG	-	chr5_3:8537770-8537789	None:intergenic	25.0%
!!!	TTTTTTTGTTTGCAGGATTT+TGG	+	chr5_3:8537772-8537791	Msa0796490:intron	25.0%
!!!	TTTTTTGTTTGCAGGATTTT+GGG	+	chr5_3:8537773-8537792	Msa0796490:intron	25.0%
!!!	GGATTTTGATGTTTTTATGA+TGG	+	chr5_3:8537935-8537954	Msa0796490:three_prime_UTR	25.0%
	TAAATGCTAGAAGCAAAATG+AGG	+	chr5_3:8535911-8535930	Msa0796490:five_prime_UTR	30.0%
	TGCATAAAACAAAATGGAAC+GGG	-	chr5_3:8536148-8536167	None:intergenic	30.0%
	CTGCATAAAACAAAATGGAA+CGG	-	chr5_3:8536149-8536168	None:intergenic	30.0%
!	CTTGGTTGATATAAAAGAGA+TGG	-	chr5_3:8536182-8536201	None:intergenic	30.0%
	TATCAACCAAGAAATATGTC+AGG	+	chr5_3:8536191-8536210	Msa0796490:exon	30.0%
	ATCAACCAAGAAATATGTCA+GGG	+	chr5_3:8536192-8536211	Msa0796490:exon	30.0%
	TGGAAATGAGTTATGATAAG+TGG	-	chr5_3:8536314-8536333	None:intergenic	30.0%
	CAACTTATGAAAACAGCTTA+TGG	-	chr5_3:8536377-8536396	None:intergenic	30.0%
!	TTACTGTTTGACTCGAAATT+AGG	+	chr5_3:8536464-8536483	Msa0796490:intron	30.0%
!	TACTGTTTGACTCGAAATTA+GGG	+	chr5_3:8536465-8536484	Msa0796490:intron	30.0%
	GCAACATAAAGTAAACTTAG+GGG	+	chr5_3:8536539-8536558	Msa0796490:intron	30.0%
	CAACATAAAGTAAACTTAGG+GGG	+	chr5_3:8536540-8536559	Msa0796490:intron	30.0%
	AAAATAAGACAATGCAAACG+GGG	+	chr5_3:8536804-8536823	Msa0796490:intron	30.0%
	AGATAACTGAATCTGATATC+CGG	+	chr5_3:8536903-8536922	Msa0796490:intron	30.0%
	TTCACCAATTTGACATAATC+AGG	-	chr5_3:8537357-8537376	None:intergenic	30.0%
	ACAAGGAATTGGATAAAACT+AGG	-	chr5_3:8537474-8537493	None:intergenic	30.0%
!!!	TCCCTTTTTTTTTTGTTTGC+AGG	+	chr5_3:8537765-8537784	Msa0796490:intron	30.0%
!!	TTTTTGTTTGCAGGATTTTG+GGG	+	chr5_3:8537774-8537793	Msa0796490:intron	30.0%
!!	AAGTTTTTGTTTGACTGTCA+TGG	+	chr5_3:8537884-8537903	Msa0796490:three_prime_UTR	30.0%
!	CTTTATGAAGTATCTGCTAA+GGG	+	chr5_3:8537914-8537933	Msa0796490:three_prime_UTR	30.0%
	TAAATGCTAGAAGCAAAATG+AGG	+	chr5_3:8535911-8535930	Msa0796490:five_prime_UTR	30.0%
	TGCATAAAACAAAATGGAAC+GGG	-	chr5_3:8536148-8536167	None:intergenic	30.0%
	CTGCATAAAACAAAATGGAA+CGG	-	chr5_3:8536149-8536168	None:intergenic	30.0%
!	CTTGGTTGATATAAAAGAGA+TGG	-	chr5_3:8536182-8536201	None:intergenic	30.0%
	TATCAACCAAGAAATATGTC+AGG	+	chr5_3:8536191-8536210	Msa0796490:exon	30.0%
	ATCAACCAAGAAATATGTCA+GGG	+	chr5_3:8536192-8536211	Msa0796490:exon	30.0%
	TGGAAATGAGTTATGATAAG+TGG	-	chr5_3:8536314-8536333	None:intergenic	30.0%
	CAACTTATGAAAACAGCTTA+TGG	-	chr5_3:8536377-8536396	None:intergenic	30.0%
!	TTACTGTTTGACTCGAAATT+AGG	+	chr5_3:8536464-8536483	Msa0796490:intron	30.0%
!	TACTGTTTGACTCGAAATTA+GGG	+	chr5_3:8536465-8536484	Msa0796490:intron	30.0%
	GCAACATAAAGTAAACTTAG+GGG	+	chr5_3:8536539-8536558	Msa0796490:intron	30.0%
	CAACATAAAGTAAACTTAGG+GGG	+	chr5_3:8536540-8536559	Msa0796490:intron	30.0%
	AAAATAAGACAATGCAAACG+GGG	+	chr5_3:8536804-8536823	Msa0796490:intron	30.0%
	AGATAACTGAATCTGATATC+CGG	+	chr5_3:8536903-8536922	Msa0796490:intron	30.0%
	TTCACCAATTTGACATAATC+AGG	-	chr5_3:8537357-8537376	None:intergenic	30.0%
	ACAAGGAATTGGATAAAACT+AGG	-	chr5_3:8537474-8537493	None:intergenic	30.0%
!!!	TCCCTTTTTTTTTTGTTTGC+AGG	+	chr5_3:8537765-8537784	Msa0796490:intron	30.0%
!!	TTTTTGTTTGCAGGATTTTG+GGG	+	chr5_3:8537774-8537793	Msa0796490:intron	30.0%
!!	AAGTTTTTGTTTGACTGTCA+TGG	+	chr5_3:8537884-8537903	Msa0796490:three_prime_UTR	30.0%
!	CTTTATGAAGTATCTGCTAA+GGG	+	chr5_3:8537914-8537933	Msa0796490:three_prime_UTR	30.0%
!!!	CGTTCCATTTTGTTTTATGC+AGG	+	chr5_3:8536147-8536166	Msa0796490:intron	35.0%
	ACATACCCTGACATATTTCT+TGG	-	chr5_3:8536200-8536219	None:intergenic	35.0%
	ATTGTAATTTAGGCCCTGTT+TGG	+	chr5_3:8536268-8536287	Msa0796490:intron	35.0%
	ATCAGATGTTTGTCCAAACA+GGG	-	chr5_3:8536284-8536303	None:intergenic	35.0%
	TATCAGATGTTTGTCCAAAC+AGG	-	chr5_3:8536285-8536304	None:intergenic	35.0%
!!	GCTGTTTTCATAAGTTGTTG+TGG	+	chr5_3:8536380-8536399	Msa0796490:intron	35.0%
	AAATAAGCTGAAGACAGCTA+AGG	+	chr5_3:8536414-8536433	Msa0796490:intron	35.0%
!	ACTGTTTGACTCGAAATTAG+GGG	+	chr5_3:8536466-8536485	Msa0796490:intron	35.0%
!	TCACAACTTTGGGAAACTTA+CGG	+	chr5_3:8536597-8536616	Msa0796490:intron	35.0%
	GTAGTTATTACTAAGGTGAC+CGG	-	chr5_3:8536925-8536944	None:intergenic	35.0%
!	TTTGTTATGCAGTGAAGAAG+AGG	+	chr5_3:8537143-8537162	Msa0796490:intron	35.0%
	CCAATTTGACATAATCAGGT+TGG	-	chr5_3:8537353-8537372	None:intergenic	35.0%
	CCAACCTGATTATGTCAAAT+TGG	+	chr5_3:8537350-8537369	Msa0796490:CDS	35.0%
	ATCAATCTTGCACAACTACA+TGG	-	chr5_3:8537625-8537644	None:intergenic	35.0%
!	TTGTGCAAGATTGATTCAGA+AGG	+	chr5_3:8537630-8537649	Msa0796490:CDS	35.0%
	TTGATTCAGAAGGTAAAGCT+AGG	+	chr5_3:8537640-8537659	Msa0796490:CDS	35.0%
	ATGCTGCAAAACAACATTGT+AGG	-	chr5_3:8537812-8537831	None:intergenic	35.0%
	CCTTAGCAGATACTTCATAA+AGG	-	chr5_3:8537916-8537935	None:intergenic	35.0%
!	CCTTTATGAAGTATCTGCTA+AGG	+	chr5_3:8537913-8537932	Msa0796490:three_prime_UTR	35.0%
	ATGCATTAGACCTTTGATCA+AGG	-	chr5_3:8535866-8535885	None:intergenic	35.0%
!!!	CGTTCCATTTTGTTTTATGC+AGG	+	chr5_3:8536147-8536166	Msa0796490:intron	35.0%
	ACATACCCTGACATATTTCT+TGG	-	chr5_3:8536200-8536219	None:intergenic	35.0%
	ATTGTAATTTAGGCCCTGTT+TGG	+	chr5_3:8536268-8536287	Msa0796490:intron	35.0%
	ATCAGATGTTTGTCCAAACA+GGG	-	chr5_3:8536284-8536303	None:intergenic	35.0%
	TATCAGATGTTTGTCCAAAC+AGG	-	chr5_3:8536285-8536304	None:intergenic	35.0%
!!	GCTGTTTTCATAAGTTGTTG+TGG	+	chr5_3:8536380-8536399	Msa0796490:intron	35.0%
	AAATAAGCTGAAGACAGCTA+AGG	+	chr5_3:8536414-8536433	Msa0796490:intron	35.0%
!	ACTGTTTGACTCGAAATTAG+GGG	+	chr5_3:8536466-8536485	Msa0796490:intron	35.0%
!	TCACAACTTTGGGAAACTTA+CGG	+	chr5_3:8536597-8536616	Msa0796490:intron	35.0%
	GTAGTTATTACTAAGGTGAC+CGG	-	chr5_3:8536925-8536944	None:intergenic	35.0%
!	TTTGTTATGCAGTGAAGAAG+AGG	+	chr5_3:8537143-8537162	Msa0796490:intron	35.0%
	CCAATTTGACATAATCAGGT+TGG	-	chr5_3:8537353-8537372	None:intergenic	35.0%
	CCAACCTGATTATGTCAAAT+TGG	+	chr5_3:8537350-8537369	Msa0796490:CDS	35.0%
	ATCAATCTTGCACAACTACA+TGG	-	chr5_3:8537625-8537644	None:intergenic	35.0%
!	TTGTGCAAGATTGATTCAGA+AGG	+	chr5_3:8537630-8537649	Msa0796490:CDS	35.0%
	TTGATTCAGAAGGTAAAGCT+AGG	+	chr5_3:8537640-8537659	Msa0796490:CDS	35.0%
	ATGCTGCAAAACAACATTGT+AGG	-	chr5_3:8537812-8537831	None:intergenic	35.0%
	CCTTAGCAGATACTTCATAA+AGG	-	chr5_3:8537916-8537935	None:intergenic	35.0%
!	CCTTTATGAAGTATCTGCTA+AGG	+	chr5_3:8537913-8537932	Msa0796490:three_prime_UTR	35.0%
	TCTATGAGCATAAGTACACG+TGG	-	chr5_3:8535939-8535958	None:intergenic	40.0%
!	CTGTTTGACTCGAAATTAGG+GGG	+	chr5_3:8536467-8536486	Msa0796490:intron	40.0%
	TAAAGTAAACTTAGGGGGCT+TGG	+	chr5_3:8536545-8536564	Msa0796490:intron	40.0%
	GGGGTCAAAATCACAACTTT+GGG	+	chr5_3:8536587-8536606	Msa0796490:intron	40.0%
!	CACAACTTTGGGAAACTTAC+GGG	+	chr5_3:8536598-8536617	Msa0796490:intron	40.0%
!	ACAACTTTGGGAAACTTACG+GGG	+	chr5_3:8536599-8536618	Msa0796490:intron	40.0%
	TGTCTCAAGATTTATGCTCC+TGG	+	chr5_3:8537006-8537025	Msa0796490:intron	40.0%
	AGCTATACATGAGACACACA+AGG	-	chr5_3:8537071-8537090	None:intergenic	40.0%
	AAAGCAGTCATGATGTCCAT+TGG	-	chr5_3:8537213-8537232	None:intergenic	40.0%
	CATAAGCACGAGACTTTCTA+AGG	-	chr5_3:8537245-8537264	None:intergenic	40.0%
	CTTAGAAAGTCTCGTGCTTA+TGG	+	chr5_3:8537243-8537262	Msa0796490:CDS	40.0%
!!	ATCAGGTTGGTCACAATCTT+CGG	-	chr5_3:8537340-8537359	None:intergenic	40.0%
	AATGGATGTGCACAAGGAAT+TGG	-	chr5_3:8537485-8537504	None:intergenic	40.0%
	ATTTGGGAATTGGGAGCAAA+TGG	-	chr5_3:8537503-8537522	None:intergenic	40.0%
	TTCAGAAGGTAAAGCTAGGA+AGG	+	chr5_3:8537644-8537663	Msa0796490:CDS	40.0%
	TCTATGAGCATAAGTACACG+TGG	-	chr5_3:8535939-8535958	None:intergenic	40.0%
!	CTGTTTGACTCGAAATTAGG+GGG	+	chr5_3:8536467-8536486	Msa0796490:intron	40.0%
	TAAAGTAAACTTAGGGGGCT+TGG	+	chr5_3:8536545-8536564	Msa0796490:intron	40.0%
	GGGGTCAAAATCACAACTTT+GGG	+	chr5_3:8536587-8536606	Msa0796490:intron	40.0%
!	CACAACTTTGGGAAACTTAC+GGG	+	chr5_3:8536598-8536617	Msa0796490:intron	40.0%
!	ACAACTTTGGGAAACTTACG+GGG	+	chr5_3:8536599-8536618	Msa0796490:intron	40.0%
	TGTCTCAAGATTTATGCTCC+TGG	+	chr5_3:8537006-8537025	Msa0796490:intron	40.0%
	AGCTATACATGAGACACACA+AGG	-	chr5_3:8537071-8537090	None:intergenic	40.0%
	AAAGCAGTCATGATGTCCAT+TGG	-	chr5_3:8537213-8537232	None:intergenic	40.0%
	CATAAGCACGAGACTTTCTA+AGG	-	chr5_3:8537245-8537264	None:intergenic	40.0%
	CTTAGAAAGTCTCGTGCTTA+TGG	+	chr5_3:8537243-8537262	Msa0796490:CDS	40.0%
!!	ATCAGGTTGGTCACAATCTT+CGG	-	chr5_3:8537340-8537359	None:intergenic	40.0%
	AATGGATGTGCACAAGGAAT+TGG	-	chr5_3:8537485-8537504	None:intergenic	40.0%
	ATTTGGGAATTGGGAGCAAA+TGG	-	chr5_3:8537503-8537522	None:intergenic	40.0%
	TTCAGAAGGTAAAGCTAGGA+AGG	+	chr5_3:8537644-8537663	Msa0796490:CDS	40.0%
	CAGAGAGGGTTTCAATTCGA+TGG	-	chr5_3:8536032-8536051	None:intergenic	45.0%
	AGCTGGTATGTACACTCTCA+CGG	+	chr5_3:8536086-8536105	Msa0796490:intron	45.0%
	GGGCCTGGAAAGTAAACTTT+GGG	+	chr5_3:8536487-8536506	Msa0796490:intron	45.0%
	GGCCTGGAAAGTAAACTTTG+GGG	+	chr5_3:8536488-8536507	Msa0796490:intron	45.0%
	GCCTGGAAAGTAAACTTTGG+GGG	+	chr5_3:8536489-8536508	Msa0796490:intron	45.0%
!!	GTTGCAATTTTAGCCCCTCA+AGG	-	chr5_3:8536524-8536543	None:intergenic	45.0%
	GGGGGTCAAAATCACAACTT+TGG	+	chr5_3:8536586-8536605	Msa0796490:intron	45.0%
	GATAAAACTACGGGCCTAGT+TGG	-	chr5_3:8536837-8536856	None:intergenic	45.0%
	AGAAAGTCTCGTGCTTATGG+TGG	+	chr5_3:8537246-8537265	Msa0796490:CDS	45.0%
	GGTAAAGCTAGGAAGGTTAC+CGG	+	chr5_3:8537651-8537670	Msa0796490:CDS	45.0%
	ATGCTCTTGTGTGGTTGTCA+GGG	+	chr5_3:8537674-8537693	Msa0796490:CDS	45.0%
!!	TTGTTTGCAGGATTTTGGGG+AGG	+	chr5_3:8537777-8537796	Msa0796490:intron	45.0%
	CAGAGAGGGTTTCAATTCGA+TGG	-	chr5_3:8536032-8536051	None:intergenic	45.0%
	AGCTGGTATGTACACTCTCA+CGG	+	chr5_3:8536086-8536105	Msa0796490:intron	45.0%
	GGGCCTGGAAAGTAAACTTT+GGG	+	chr5_3:8536487-8536506	Msa0796490:intron	45.0%
	GGCCTGGAAAGTAAACTTTG+GGG	+	chr5_3:8536488-8536507	Msa0796490:intron	45.0%
	GCCTGGAAAGTAAACTTTGG+GGG	+	chr5_3:8536489-8536508	Msa0796490:intron	45.0%
!!	GTTGCAATTTTAGCCCCTCA+AGG	-	chr5_3:8536524-8536543	None:intergenic	45.0%
	GGGGGTCAAAATCACAACTT+TGG	+	chr5_3:8536586-8536605	Msa0796490:intron	45.0%
	GATAAAACTACGGGCCTAGT+TGG	-	chr5_3:8536837-8536856	None:intergenic	45.0%
	AGAAAGTCTCGTGCTTATGG+TGG	+	chr5_3:8537246-8537265	Msa0796490:CDS	45.0%
	GGTAAAGCTAGGAAGGTTAC+CGG	+	chr5_3:8537651-8537670	Msa0796490:CDS	45.0%
	ATGCTCTTGTGTGGTTGTCA+GGG	+	chr5_3:8537674-8537693	Msa0796490:CDS	45.0%
!!	TTGTTTGCAGGATTTTGGGG+AGG	+	chr5_3:8537777-8537796	Msa0796490:intron	45.0%
!!!	TTATTTATTTTATTGATTTT+TGG	+	chr5_3:8537589-8537608	Msa0796490:intron	5.0%
!!!	TATTTATTTTATTGATTTTT+GGG	+	chr5_3:8537590-8537609	Msa0796490:intron	5.0%
!!!	TTATTTATTTTATTGATTTT+TGG	+	chr5_3:8537589-8537608	Msa0796490:intron	5.0%
!!!	TATTTATTTTATTGATTTTT+GGG	+	chr5_3:8537590-8537609	Msa0796490:intron	5.0%
!	GTGAGAGTGTACATACCAGC+TGG	-	chr5_3:8536087-8536106	None:intergenic	50.0%
	GGGGCCTGGAAAGTAAACTT+TGG	+	chr5_3:8536486-8536505	Msa0796490:intron	50.0%
	GCCCCCAAAGTTTACTTTCC+AGG	-	chr5_3:8536493-8536512	None:intergenic	50.0%
	TGGGGGCTAAAATTGCCTTG+AGG	+	chr5_3:8536506-8536525	Msa0796490:intron	50.0%
	GGGGGCTAAAATTGCCTTGA+GGG	+	chr5_3:8536507-8536526	Msa0796490:intron	50.0%
	GGGGCTAAAATTGCCTTGAG+GGG	+	chr5_3:8536508-8536527	Msa0796490:intron	50.0%
	AACGGGGCCTAAATCCAACT+AGG	+	chr5_3:8536820-8536839	Msa0796490:intron	50.0%
	CTACGGGCCTAGTTGGATTT+AGG	-	chr5_3:8536830-8536849	None:intergenic	50.0%
	GGAATTGCAGCAGCAACAAC+AGG	-	chr5_3:8537183-8537202	None:intergenic	50.0%
	GTTGTTGCTGCTGCAATTCC+AGG	+	chr5_3:8537183-8537202	Msa0796490:CDS	50.0%
	CTTGCACGAGGTCTTCATGA+AGG	+	chr5_3:8537270-8537289	Msa0796490:CDS	50.0%
	AACATTGTGCTCTGCGCAGA+GGG	-	chr5_3:8537382-8537401	None:intergenic	50.0%
	TAACATTGTGCTCTGCGCAG+AGG	-	chr5_3:8537383-8537402	None:intergenic	50.0%
	GTTCCAAGTGCAAAGACCCT+TGG	+	chr5_3:8537414-8537433	Msa0796490:CDS	50.0%
	TCTCCAAGGGTCTTTGCACT+TGG	-	chr5_3:8537420-8537439	None:intergenic	50.0%
	TGCAAAGACCCTTGGAGAGT+GGG	+	chr5_3:8537422-8537441	Msa0796490:CDS	50.0%
	GGAGCAAATGGATGTGCACA+AGG	-	chr5_3:8537491-8537510	None:intergenic	50.0%
!!	GACAACCACACAAGAGCATC+CGG	-	chr5_3:8537673-8537692	None:intergenic	50.0%
	GATGCTCTTGTGTGGTTGTC+AGG	+	chr5_3:8537673-8537692	Msa0796490:CDS	50.0%
	CTTGTGTGGTTGTCAGGGTA+TGG	+	chr5_3:8537679-8537698	Msa0796490:intron	50.0%
!	GTGAGAGTGTACATACCAGC+TGG	-	chr5_3:8536087-8536106	None:intergenic	50.0%
	GGGGCCTGGAAAGTAAACTT+TGG	+	chr5_3:8536486-8536505	Msa0796490:intron	50.0%
	GCCCCCAAAGTTTACTTTCC+AGG	-	chr5_3:8536493-8536512	None:intergenic	50.0%
	TGGGGGCTAAAATTGCCTTG+AGG	+	chr5_3:8536506-8536525	Msa0796490:intron	50.0%
	GGGGGCTAAAATTGCCTTGA+GGG	+	chr5_3:8536507-8536526	Msa0796490:intron	50.0%
	GGGGCTAAAATTGCCTTGAG+GGG	+	chr5_3:8536508-8536527	Msa0796490:intron	50.0%
	AACGGGGCCTAAATCCAACT+AGG	+	chr5_3:8536820-8536839	Msa0796490:intron	50.0%
	CTACGGGCCTAGTTGGATTT+AGG	-	chr5_3:8536830-8536849	None:intergenic	50.0%
	GGAATTGCAGCAGCAACAAC+AGG	-	chr5_3:8537183-8537202	None:intergenic	50.0%
	GTTGTTGCTGCTGCAATTCC+AGG	+	chr5_3:8537183-8537202	Msa0796490:CDS	50.0%
	CTTGCACGAGGTCTTCATGA+AGG	+	chr5_3:8537270-8537289	Msa0796490:CDS	50.0%
	AACATTGTGCTCTGCGCAGA+GGG	-	chr5_3:8537382-8537401	None:intergenic	50.0%
	TAACATTGTGCTCTGCGCAG+AGG	-	chr5_3:8537383-8537402	None:intergenic	50.0%
	GTTCCAAGTGCAAAGACCCT+TGG	+	chr5_3:8537414-8537433	Msa0796490:CDS	50.0%
	TCTCCAAGGGTCTTTGCACT+TGG	-	chr5_3:8537420-8537439	None:intergenic	50.0%
	TGCAAAGACCCTTGGAGAGT+GGG	+	chr5_3:8537422-8537441	Msa0796490:CDS	50.0%
	GGAGCAAATGGATGTGCACA+AGG	-	chr5_3:8537491-8537510	None:intergenic	50.0%
!!	GACAACCACACAAGAGCATC+CGG	-	chr5_3:8537673-8537692	None:intergenic	50.0%
	GATGCTCTTGTGTGGTTGTC+AGG	+	chr5_3:8537673-8537692	Msa0796490:CDS	50.0%
	CTTGTGTGGTTGTCAGGGTA+TGG	+	chr5_3:8537679-8537698	Msa0796490:intron	50.0%
!	CGGAGATAGAGGCACAGAGA+GGG	-	chr5_3:8536046-8536065	None:intergenic	55.0%
	TTGCAGGAAGGCGGAGATAG+AGG	-	chr5_3:8536057-8536076	None:intergenic	55.0%
	GGATGCGATTTGCAGGAAGG+CGG	-	chr5_3:8536066-8536085	None:intergenic	55.0%
	GCTGGATGCGATTTGCAGGA+AGG	-	chr5_3:8536069-8536088	None:intergenic	55.0%
	TCCTGCAAATCGCATCCAGC+TGG	+	chr5_3:8536069-8536088	Msa0796490:five_prime_UTR	55.0%
	ACCAGCTGGATGCGATTTGC+AGG	-	chr5_3:8536073-8536092	None:intergenic	55.0%
	TGACTCGAAATTAGGGGGCC+TGG	+	chr5_3:8536472-8536491	Msa0796490:intron	55.0%
	TGCAATTCCAGGCGAGCCAA+TGG	+	chr5_3:8537194-8537213	Msa0796490:CDS	55.0%
!!	ATGATGTCCATTGGCTCGCC+TGG	-	chr5_3:8537204-8537223	None:intergenic	55.0%
!	GCTTATGGTGGTCTTGCACG+AGG	+	chr5_3:8537258-8537277	Msa0796490:CDS	55.0%
	GTGCAAAGACCCTTGGAGAG+TGG	+	chr5_3:8537421-8537440	Msa0796490:CDS	55.0%
	GGTTACCGGATGCTCTTGTG+TGG	+	chr5_3:8537665-8537684	Msa0796490:CDS	55.0%
!	CGGAGATAGAGGCACAGAGA+GGG	-	chr5_3:8536046-8536065	None:intergenic	55.0%
	TTGCAGGAAGGCGGAGATAG+AGG	-	chr5_3:8536057-8536076	None:intergenic	55.0%
	GGATGCGATTTGCAGGAAGG+CGG	-	chr5_3:8536066-8536085	None:intergenic	55.0%
	GCTGGATGCGATTTGCAGGA+AGG	-	chr5_3:8536069-8536088	None:intergenic	55.0%
	TCCTGCAAATCGCATCCAGC+TGG	+	chr5_3:8536069-8536088	Msa0796490:five_prime_UTR	55.0%
	ACCAGCTGGATGCGATTTGC+AGG	-	chr5_3:8536073-8536092	None:intergenic	55.0%
	TGACTCGAAATTAGGGGGCC+TGG	+	chr5_3:8536472-8536491	Msa0796490:intron	55.0%
	TGCAATTCCAGGCGAGCCAA+TGG	+	chr5_3:8537194-8537213	Msa0796490:CDS	55.0%
!!	ATGATGTCCATTGGCTCGCC+TGG	-	chr5_3:8537204-8537223	None:intergenic	55.0%
!	GCTTATGGTGGTCTTGCACG+AGG	+	chr5_3:8537258-8537277	Msa0796490:CDS	55.0%
	GTGCAAAGACCCTTGGAGAG+TGG	+	chr5_3:8537421-8537440	Msa0796490:CDS	55.0%
	GGTTACCGGATGCTCTTGTG+TGG	+	chr5_3:8537665-8537684	Msa0796490:CDS	55.0%
!	GCGGAGATAGAGGCACAGAG+AGG	-	chr5_3:8536047-8536066	None:intergenic	60.0%
	AAGACCCTTGGAGAGTGGGC+TGG	+	chr5_3:8537426-8537445	Msa0796490:CDS	60.0%
	TACGCCAGCCCACTCTCCAA+GGG	-	chr5_3:8537433-8537452	None:intergenic	60.0%
	TTACGCCAGCCCACTCTCCA+AGG	-	chr5_3:8537434-8537453	None:intergenic	60.0%
	GCAACAAGACTGCGCGAGCA+TGG	-	chr5_3:8537563-8537582	None:intergenic	60.0%
!	GCGGAGATAGAGGCACAGAG+AGG	-	chr5_3:8536047-8536066	None:intergenic	60.0%
	AAGACCCTTGGAGAGTGGGC+TGG	+	chr5_3:8537426-8537445	Msa0796490:CDS	60.0%
	TACGCCAGCCCACTCTCCAA+GGG	-	chr5_3:8537433-8537452	None:intergenic	60.0%
	TTACGCCAGCCCACTCTCCA+AGG	-	chr5_3:8537434-8537453	None:intergenic	60.0%
	GCAACAAGACTGCGCGAGCA+TGG	-	chr5_3:8537563-8537582	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_3	gene	8535864	8538002	8535864	ID=Msa0796490;Name=Msa0796490
chr5_3	mRNA	8535864	8538002	8535864	ID=Msa0796490-mRNA-1;Parent=Msa0796490;Name=Msa0796490-mRNA-1;_AED=0.02;_eAED=0.02;_QI=264\|1\|1\|1\|1\|0.8\|5\|156\|142
chr5_3	exon	8535864	8536090	8535864	ID=Msa0796490-mRNA-1:exon:3548;Parent=Msa0796490-mRNA-1
chr5_3	exon	8536169	8536213	8536169	ID=Msa0796490-mRNA-1:exon:3549;Parent=Msa0796490-mRNA-1
chr5_3	exon	8537155	8537449	8537155	ID=Msa0796490-mRNA-1:exon:3550;Parent=Msa0796490-mRNA-1
chr5_3	exon	8537630	8537695	8537630	ID=Msa0796490-mRNA-1:exon:3551;Parent=Msa0796490-mRNA-1
chr5_3	exon	8537787	8538002	8537787	ID=Msa0796490-mRNA-1:exon:3552;Parent=Msa0796490-mRNA-1
chr5_3	five_prime_UTR	8535864	8536090	8535864	ID=Msa0796490-mRNA-1:five_prime_utr;Parent=Msa0796490-mRNA-1
chr5_3	five_prime_UTR	8536169	8536205	8536169	ID=Msa0796490-mRNA-1:five_prime_utr;Parent=Msa0796490-mRNA-1
chr5_3	CDS	8536206	8536213	8536206	ID=Msa0796490-mRNA-1:cds;Parent=Msa0796490-mRNA-1
chr5_3	CDS	8537155	8537449	8537155	ID=Msa0796490-mRNA-1:cds;Parent=Msa0796490-mRNA-1
chr5_3	CDS	8537630	8537695	8537630	ID=Msa0796490-mRNA-1:cds;Parent=Msa0796490-mRNA-1
chr5_3	CDS	8537787	8537846	8537787	ID=Msa0796490-mRNA-1:cds;Parent=Msa0796490-mRNA-1
chr5_3	three_prime_UTR	8537847	8538002	8537847	ID=Msa0796490-mRNA-1:three_prime_utr;Parent=Msa0796490-mRNA-1

Gene Sequence

>Msa0796490

ATGTCAGGTGAAGAAGAGGTTGTTGCAGTTGAGCCTGTTGTTGCTGCTGCAATTCCAGGCGAGCCAATGGACATCATGACTGCTTTACAGCTTGTCCTTAGAAAGTCTCGTGCTTATGGTGGTCTTGCACGAGGTCTTCATGAAGGTGCAAAAGTGATTGAGAAGCATGCTGCACAGCTTTGTGTTCTAGCCGAAGATTGTGACCAACCTGATTATGTCAAATTGGTGAAAGCCCTCTGCGCAGAGCACAATGTTAGCTTGTTGACAGTTCCAAGTGCAAAGACCCTTGGAGAGTGGGCTGGCTTGTGCAAGATTGATTCAGAAGGTAAAGCTAGGAAGGTTACCGGATGCTCTTGTGTGGTTGTCAGGGATTTTGGGGAGGAACACGAAGCCTACAATGTTGTTTTGCAGCATGTAAAAGCTAACTAA

Protein sequence

>Msa0796490

MSGEEEVVAVEPVVAAAIPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVRDFGEEHEAYNVVLQHVKAN*