AlfalfaGEDB | Msa0749000

M. sativa cultivar zhongmu-4 / Msa0749000

KEGG: K02951
GO: -
PFAM: PF01248.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749000	sp\|Q9XHS0\|RS12_HORVU	72.727	143	38	1	1	142	1	143	8.99e-70	209

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749000	G7JXD6	99.296	142	1	0	1	142	1	142	1.27e-97	286

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0087910	Msa0749000	0.834617	2.702497e-56	-8.615850e-47
Msa0114600	Msa0749000	0.867358	1.451857e-65	-8.615850e-47
Msa0602900	Msa0749000	0.805162	1.524956e-49	-8.615850e-47
Msa0605890	Msa0749000	0.838740	2.402472e-57	-8.615850e-47
Msa0643960	Msa0749000	0.801822	7.510840e-49	-8.615850e-47
Msa0663400	Msa0749000	0.855875	4.702338e-62	-8.615850e-47
Msa0686550	Msa0749000	0.817686	2.899270e-52	-8.615850e-47
Msa0694400	Msa0749000	0.820056	8.389206e-53	-8.615850e-47
Msa0749000	Msa0796490	0.988593	1.245026e-174	-8.615850e-47
Msa0749000	Msa0835190	0.824971	6.045128e-54	-8.615850e-47
Msa0749000	Msa0902730	0.810602	1.062573e-50	-8.615850e-47
Msa0749000	Msa0929700	0.854140	1.500932e-61	-8.615850e-47
Msa0749000	Msa0930890	0.855127	7.769524e-62	-8.615850e-47
Msa0749000	Msa0978470	0.860164	2.500132e-63	-8.615850e-47
Msa0749000	Msa1078980	0.800892	1.164204e-48	-8.615850e-47
Msa0749000	Msa1079910	0.801051	1.080447e-48	-8.615850e-47
Msa0749000	Msa1079920	0.821158	4.684000e-53	-8.615850e-47
Msa0749000	Msa1093500	0.811502	6.779956e-51	-8.615850e-47
Msa0749000	Msa1124850	0.810739	9.923822e-51	-8.615850e-47
Msa0749000	Msa1164150	0.813332	2.700448e-51	-8.615850e-47
Msa0749000	Msa1169180	0.816639	4.984313e-52	-8.615850e-47
Msa0749000	Msa1180000	0.821084	4.872345e-53	-8.615850e-47
Msa0749000	Msa1208330	0.861898	7.421774e-64	-8.615850e-47
Msa0749000	Msa1270640	0.829718	4.401518e-55	-8.615850e-47
Msa0749000	Msa1270710	0.827948	1.179843e-54	-8.615850e-47
Msa0749000	Msa1330730	0.839892	1.207599e-57	-8.615850e-47
Msa0749000	Msa1341780	0.814180	1.756976e-51	-8.615850e-47
Msa0749000	Msa1351020	0.810015	1.422245e-50	-8.615850e-47
Msa0749000	Msa1351910	0.818981	1.475997e-52	-8.615850e-47
Msa0749000	Msa1385480	0.828204	1.023896e-54	-8.615850e-47
Msa0749000	Msa1397660	0.801745	7.788604e-49	-8.615850e-47
Msa0749000	Msa1446410	0.817986	2.480931e-52	-8.615850e-47
Msa0749000	Msa1463570	0.814083	1.845745e-51	-8.615850e-47
Msa0128330	Msa0749000	0.818415	1.983516e-52	-8.615850e-47
Msa0134580	Msa0749000	0.804491	2.106182e-49	-8.615850e-47
Msa0167860	Msa0749000	0.856121	3.985225e-62	-8.615850e-47
Msa0174580	Msa0749000	0.825126	5.556711e-54	-8.615850e-47
Msa0191550	Msa0749000	0.802023	6.827924e-49	-8.615850e-47
Msa0194940	Msa0749000	0.838514	2.749244e-57	-8.615850e-47
Msa0225350	Msa0749000	0.815930	7.180888e-52	-8.615850e-47
Msa0235050	Msa0749000	0.826255	2.998474e-54	-8.615850e-47
Msa0419710	Msa0749000	0.864971	8.279464e-65	-8.615850e-47
Msa0426250	Msa0749000	0.845640	3.580823e-59	-8.615850e-47
Msa0450150	Msa0749000	0.859846	3.116894e-63	-8.615850e-47
Msa0468440	Msa0749000	0.813054	3.108330e-51	-8.615850e-47
Msa0481520	Msa0749000	0.813614	2.341051e-51	-8.615850e-47
Msa0277600	Msa0749000	0.833027	6.748682e-56	-8.615850e-47
Msa0312210	Msa0749000	0.814825	1.265060e-51	-8.615850e-47
Msa0313060	Msa0749000	0.812986	3.216909e-51	-8.615850e-47
Msa0313520	Msa0749000	0.808496	3.010358e-50	-8.615850e-47
Msa0315430	Msa0749000	0.844879	5.751037e-59	-8.615850e-47
Msa0341880	Msa0749000	0.829138	6.086182e-55	-8.615850e-47
Msa0529900	Msa0749000	0.845136	4.902007e-59	-8.615850e-47
Msa0547920	Msa0749000	0.807745	4.349874e-50	-8.615850e-47
Msa0573550	Msa0749000	0.852903	3.400840e-61	-8.615850e-47
Msa0579830	Msa0749000	0.810832	9.473610e-51	-8.615850e-47
Msa0585570	Msa0749000	0.855853	4.774637e-62	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749000	MtrunA17_Chr5g0399411	99.296	142	1	0	1	142	1	142	2.44e-101	286
Msa0749000	MtrunA17_Chr8g0384331	94.444	126	7	0	17	142	18	143	1.83e-86	248
Msa0749000	MtrunA17_Chr4g0001281	94.444	126	7	0	17	142	19	144	2.46e-85	246
Msa0749000	MtrunA17_Chr4g0037191	71.429	56	14	1	1	54	51	106	1.98e-19	78.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749000	AT2G32060.3	74.400	125	31	1	18	142	21	144	1.38e-66	199
Msa0749000	AT2G32060.1	74.400	125	31	1	18	142	21	144	1.38e-66	199
Msa0749000	AT2G32060.2	74.400	125	31	1	18	142	21	144	1.38e-66	199
Msa0749000	AT1G15930.1	74.400	125	31	1	18	142	21	144	5.53e-64	192
Msa0749000	AT1G15930.2	74.400	125	31	1	18	142	21	144	5.53e-64	192

Find 51 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACATACCCTGACATATTTCT+TGG	0.238476	5_2:-2391597	None:intergenic
TTCACCAATTTGACATAATC+AGG	0.268051	5_2:-2392754	None:intergenic
GGAACACGTCTCAAAGTAAA+TGG	0.268765	5_2:-2391284	None:intergenic
GTTGTTGCTGCTGCAATTCC+AGG	0.269519	5_2:+2392583	Msa0749000:CDS
TGAGACGTGTTCCGTAAAAT+TGG	0.291782	5_2:+2391294	Msa0749000:five_prime_UTR
TTAGTATTAATTGGAAAAGT+AGG	0.335008	5_2:+2391396	Msa0749000:five_prime_UTR
GATGCTCTTGTGTGGTTGTC+AGG	0.354575	5_2:+2393073	Msa0749000:CDS
ACCAGCTGGATGCGATTTGC+AGG	0.362694	5_2:-2391470	None:intergenic
ATGCTGCAAAACAACATTGT+AGG	0.363171	5_2:-2393209	None:intergenic
CATAAGCACGAGACTTTCTA+AGG	0.363450	5_2:-2392642	None:intergenic
CCAACCTGATTATGTCAAAT+TGG	0.373462	5_2:+2392750	Msa0749000:CDS
CTTAGAAAGTCTCGTGCTTA+TGG	0.383982	5_2:+2392643	Msa0749000:CDS
ATCAGGTTGGTCACAATCTT+CGG	0.412966	5_2:-2392737	None:intergenic
ATGATGTCCATTGGCTCGCC+TGG	0.437864	5_2:-2392601	None:intergenic
TTGCAGGAAGGCGGAGATAG+AGG	0.453615	5_2:-2391454	None:intergenic
TAGTATTAATTGGAAAAGTA+GGG	0.458684	5_2:+2391397	Msa0749000:five_prime_UTR
TCTCCAAGGGTCTTTGCACT+TGG	0.459795	5_2:-2392817	None:intergenic
TATCAACCAAGAAATATGTC+AGG	0.459989	5_2:+2391591	Msa0749000:exon
GGAATTGCAGCAGCAACAAC+AGG	0.463311	5_2:-2392580	None:intergenic
CCTTTATGAAGTATCTGCTA+AGG	0.472954	5_2:+2393313	Msa0749000:three_prime_UTR
CCTTAGCAGATACTTCATAA+AGG	0.476358	5_2:-2393313	None:intergenic
GGTAAAGCTAGGAAGGTTAC+CGG	0.476827	5_2:+2393051	Msa0749000:CDS
CTTGGTTGATATAAAAGAGA+TGG	0.487724	5_2:-2391579	None:intergenic
AACATTGTGCTCTGCGCAGA+GGG	0.503587	5_2:-2392779	None:intergenic
CTTTATGAAGTATCTGCTAA+GGG	0.521301	5_2:+2393314	Msa0749000:three_prime_UTR
GACAACCACACAAGAGCATC+CGG	0.522597	5_2:-2393070	None:intergenic
TCCTGCAAATCGCATCCAGC+TGG	0.522745	5_2:+2391469	Msa0749000:five_prime_UTR
TTACGCCAGCCCACTCTCCA+AGG	0.529322	5_2:-2392831	None:intergenic
CAGAGACGGTTTCAATTCGA+TGG	0.529513	5_2:-2391429	None:intergenic
CCAATTTGACATAATCAGGT+TGG	0.530247	5_2:-2392750	None:intergenic
TGCAAAGACCCTTGGAGAGT+GGG	0.530356	5_2:+2392822	Msa0749000:CDS
TTTGTTATGCAGTGAAGAAG+AGG	0.537025	5_2:+2392543	Msa0749000:intron
GTTCCAAGTGCAAAGACCCT+TGG	0.537039	5_2:+2392814	Msa0749000:CDS
AAGACCCTTGGAGAGTGGGC+TGG	0.538691	5_2:+2392826	Msa0749000:CDS
TTGATTCAGAAGGTAAAGCT+AGG	0.543764	5_2:+2393040	Msa0749000:CDS
TTCAGAAGGTAAAGCTAGGA+AGG	0.557714	5_2:+2393044	Msa0749000:CDS
GCTGGATGCGATTTGCAGGA+AGG	0.568086	5_2:-2391466	None:intergenic
TGCAATTCCAGGCGAGCCAA+TGG	0.568250	5_2:+2392594	Msa0749000:CDS
GTGCAAAGACCCTTGGAGAG+TGG	0.569975	5_2:+2392821	Msa0749000:CDS
ATGCTCTTGTGTGGTTGTCA+GGG	0.586706	5_2:+2393074	Msa0749000:CDS
AAAGCAGTCATGATGTCCAT+TGG	0.589394	5_2:-2392610	None:intergenic
CTTGCACGAGGTCTTCATGA+AGG	0.605005	5_2:+2392670	Msa0749000:CDS
CGGAGATAGAGGCACAGAGA+CGG	0.616523	5_2:-2391443	None:intergenic
AGAAAGTCTCGTGCTTATGG+TGG	0.620799	5_2:+2392646	Msa0749000:CDS
TTGTGCAAGATTGATTCAGA+AGG	0.623879	5_2:+2393030	Msa0749000:CDS
TACGCCAGCCCACTCTCCAA+GGG	0.624257	5_2:-2392830	None:intergenic
GCTTATGGTGGTCTTGCACG+AGG	0.624672	5_2:+2392658	Msa0749000:CDS
TAACATTGTGCTCTGCGCAG+AGG	0.632440	5_2:-2392780	None:intergenic
ATCAACCAAGAAATATGTCA+GGG	0.636797	5_2:+2391592	Msa0749000:exon
GGTTACCGGATGCTCTTGTG+TGG	0.638821	5_2:+2393065	Msa0749000:CDS
GGATGCGATTTGCAGGAAGG+CGG	0.685140	5_2:-2391463	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAGTTAATTTTTTATTTTGT+AGG	-	chr5_2:2391353-2391372	None:intergenic	10.0%
!!!	TAGTTAATTTTTTATTTTGT+AGG	-	chr5_2:2391353-2391372	None:intergenic	10.0%
!!!	ATTTTCTAAAACCAATTTTA+CGG	-	chr5_2:2391308-2391327	None:intergenic	15.0%
!!	AAAAAAACGTTAGTATTAAT+TGG	+	chr5_2:2391387-2391406	Msa0749000:five_prime_UTR	15.0%
!!!	ATTCTTCTATTTATATGTTT+TGG	+	chr5_2:2392444-2392463	Msa0749000:intron	15.0%
!!	AAAGTTCACAATATAAATTT+GGG	-	chr5_2:2392919-2392938	None:intergenic	15.0%
!!	AAAAGTTCACAATATAAATT+TGG	-	chr5_2:2392920-2392939	None:intergenic	15.0%
!!!	ATTTTCTAAAACCAATTTTA+CGG	-	chr5_2:2391308-2391327	None:intergenic	15.0%
!!	AAAAAAACGTTAGTATTAAT+TGG	+	chr5_2:2391387-2391406	Msa0749000:five_prime_UTR	15.0%
!!!	ATTCTTCTATTTATATGTTT+TGG	+	chr5_2:2392444-2392463	Msa0749000:intron	15.0%
!!	AAAGTTCACAATATAAATTT+GGG	-	chr5_2:2392919-2392938	None:intergenic	15.0%
!!	AAAAGTTCACAATATAAATT+TGG	-	chr5_2:2392920-2392939	None:intergenic	15.0%
!!!	TTATTTTGTAGGAAAGTAAA+TGG	-	chr5_2:2391342-2391361	None:intergenic	20.0%
!!	TTAGTATTAATTGGAAAAGT+AGG	+	chr5_2:2391396-2391415	Msa0749000:five_prime_UTR	20.0%
!!	TAGTATTAATTGGAAAAGTA+GGG	+	chr5_2:2391397-2391416	Msa0749000:five_prime_UTR	20.0%
!!	TTCAAATGCAATTGTAATTT+AGG	+	chr5_2:2391658-2391677	Msa0749000:intron	20.0%
!!!	ATTTATTTTTTCTTTTGCTG+TGG	-	chr5_2:2391734-2391753	None:intergenic	20.0%
!!!	TGGAAAGAATTGTTTTTTTT+AGG	+	chr5_2:2391965-2391984	Msa0749000:intron	20.0%
!!!	GGAAAGAATTGTTTTTTTTA+GGG	+	chr5_2:2391966-2391985	Msa0749000:intron	20.0%
!!!	GAAAGAATTGTTTTTTTTAG+GGG	+	chr5_2:2391967-2391986	Msa0749000:intron	20.0%
!!!	AAAGAATTGTTTTTTTTAGG+GGG	+	chr5_2:2391968-2391987	Msa0749000:intron	20.0%
!!	TTTGCATAAGCTAAAAAAAT+AGG	-	chr5_2:2392042-2392061	None:intergenic	20.0%
!!	ATTACTTGTAGTTATTACTA+AGG	-	chr5_2:2392332-2392351	None:intergenic	20.0%
!!!	TAAAGATTTTTAAACTTGCA+AGG	-	chr5_2:2392497-2392516	None:intergenic	20.0%
!!	ACAATATAAATTTGGGAATT+GGG	-	chr5_2:2392912-2392931	None:intergenic	20.0%
!!!	TTATTTTGTAGGAAAGTAAA+TGG	-	chr5_2:2391342-2391361	None:intergenic	20.0%
!!	TTAGTATTAATTGGAAAAGT+AGG	+	chr5_2:2391396-2391415	Msa0749000:five_prime_UTR	20.0%
!!	TAGTATTAATTGGAAAAGTA+GGG	+	chr5_2:2391397-2391416	Msa0749000:five_prime_UTR	20.0%
!!	TTCAAATGCAATTGTAATTT+AGG	+	chr5_2:2391658-2391677	Msa0749000:intron	20.0%
!!!	ATTTATTTTTTCTTTTGCTG+TGG	-	chr5_2:2391734-2391753	None:intergenic	20.0%
!!!	TGGAAAGAATTGTTTTTTTT+AGG	+	chr5_2:2391965-2391984	Msa0749000:intron	20.0%
!!!	GGAAAGAATTGTTTTTTTTA+GGG	+	chr5_2:2391966-2391985	Msa0749000:intron	20.0%
!!!	GAAAGAATTGTTTTTTTTAG+GGG	+	chr5_2:2391967-2391986	Msa0749000:intron	20.0%
!!!	AAAGAATTGTTTTTTTTAGG+GGG	+	chr5_2:2391968-2391987	Msa0749000:intron	20.0%
!!	TTTGCATAAGCTAAAAAAAT+AGG	-	chr5_2:2392042-2392061	None:intergenic	20.0%
!!	ATTACTTGTAGTTATTACTA+AGG	-	chr5_2:2392332-2392351	None:intergenic	20.0%
!!!	TAAAGATTTTTAAACTTGCA+AGG	-	chr5_2:2392497-2392516	None:intergenic	20.0%
!!	ACAATATAAATTTGGGAATT+GGG	-	chr5_2:2392912-2392931	None:intergenic	20.0%
!	AATTCCTGCATAAAACAAAA+TGG	-	chr5_2:2391554-2391573	None:intergenic	25.0%
!	AACTTATGAAAACAGCTTAT+GGG	-	chr5_2:2391776-2391795	None:intergenic	25.0%
!	TTGCAACATAAAGTAAACTT+AGG	+	chr5_2:2391937-2391956	Msa0749000:intron	25.0%
!	TGCAACATAAAGTAAACTTA+GGG	+	chr5_2:2391938-2391957	Msa0749000:intron	25.0%
!!	AATAGGCTTAATTACACTTT+TGG	-	chr5_2:2392025-2392044	None:intergenic	25.0%
!	CAAAAATAAGACAATGCAAA+CGG	+	chr5_2:2392202-2392221	Msa0749000:intron	25.0%
!	AAAAATAAGACAATGCAAAC+GGG	+	chr5_2:2392203-2392222	Msa0749000:intron	25.0%
!	ATCTTAAACGATAAAACTAC+GGG	-	chr5_2:2392246-2392265	None:intergenic	25.0%
!	GATCTTAAACGATAAAACTA+CGG	-	chr5_2:2392247-2392266	None:intergenic	25.0%
!!	AATGTATAGAACTTTTTACC+AGG	-	chr5_2:2392427-2392446	None:intergenic	25.0%
!	AAAACTAGGTTAAGAATCAA+GGG	-	chr5_2:2392860-2392879	None:intergenic	25.0%
!	TAAAACTAGGTTAAGAATCA+AGG	-	chr5_2:2392861-2392880	None:intergenic	25.0%
!	CACAATATAAATTTGGGAAT+TGG	-	chr5_2:2392913-2392932	None:intergenic	25.0%
!	TTAGCATGAAAAAAGACAAT+AGG	-	chr5_2:2393128-2393147	None:intergenic	25.0%
!	TCCTGCAAACAAAAAAAAAA+GGG	-	chr5_2:2393169-2393188	None:intergenic	25.0%
!	ATCCTGCAAACAAAAAAAAA+AGG	-	chr5_2:2393170-2393189	None:intergenic	25.0%
!!!	TTTTTTTGTTTGCAGGATTT+TGG	+	chr5_2:2393172-2393191	Msa0749000:intron	25.0%
!!!	TTTTTTGTTTGCAGGATTTT+GGG	+	chr5_2:2393173-2393192	Msa0749000:intron	25.0%
!!!	GGATTTTGATGTTTTTATGA+TGG	+	chr5_2:2393335-2393354	Msa0749000:three_prime_UTR	25.0%
!	AATTCCTGCATAAAACAAAA+TGG	-	chr5_2:2391554-2391573	None:intergenic	25.0%
!	AACTTATGAAAACAGCTTAT+GGG	-	chr5_2:2391776-2391795	None:intergenic	25.0%
!	TTGCAACATAAAGTAAACTT+AGG	+	chr5_2:2391937-2391956	Msa0749000:intron	25.0%
!	TGCAACATAAAGTAAACTTA+GGG	+	chr5_2:2391938-2391957	Msa0749000:intron	25.0%
!!	AATAGGCTTAATTACACTTT+TGG	-	chr5_2:2392025-2392044	None:intergenic	25.0%
!	CAAAAATAAGACAATGCAAA+CGG	+	chr5_2:2392202-2392221	Msa0749000:intron	25.0%
!	AAAAATAAGACAATGCAAAC+GGG	+	chr5_2:2392203-2392222	Msa0749000:intron	25.0%
!	ATCTTAAACGATAAAACTAC+GGG	-	chr5_2:2392246-2392265	None:intergenic	25.0%
!	GATCTTAAACGATAAAACTA+CGG	-	chr5_2:2392247-2392266	None:intergenic	25.0%
!!	AATGTATAGAACTTTTTACC+AGG	-	chr5_2:2392427-2392446	None:intergenic	25.0%
!	AAAACTAGGTTAAGAATCAA+GGG	-	chr5_2:2392860-2392879	None:intergenic	25.0%
!	TAAAACTAGGTTAAGAATCA+AGG	-	chr5_2:2392861-2392880	None:intergenic	25.0%
!	CACAATATAAATTTGGGAAT+TGG	-	chr5_2:2392913-2392932	None:intergenic	25.0%
!	TTAGCATGAAAAAAGACAAT+AGG	-	chr5_2:2393128-2393147	None:intergenic	25.0%
!	TCCTGCAAACAAAAAAAAAA+GGG	-	chr5_2:2393169-2393188	None:intergenic	25.0%
!	ATCCTGCAAACAAAAAAAAA+AGG	-	chr5_2:2393170-2393189	None:intergenic	25.0%
!!!	TTTTTTTGTTTGCAGGATTT+TGG	+	chr5_2:2393172-2393191	Msa0749000:intron	25.0%
!!!	TTTTTTGTTTGCAGGATTTT+GGG	+	chr5_2:2393173-2393192	Msa0749000:intron	25.0%
!!!	GGATTTTGATGTTTTTATGA+TGG	+	chr5_2:2393335-2393354	Msa0749000:three_prime_UTR	25.0%
	TGCATAAAACAAAATGGAAC+GGG	-	chr5_2:2391548-2391567	None:intergenic	30.0%
	CTGCATAAAACAAAATGGAA+CGG	-	chr5_2:2391549-2391568	None:intergenic	30.0%
!	CTTGGTTGATATAAAAGAGA+TGG	-	chr5_2:2391582-2391601	None:intergenic	30.0%
	TATCAACCAAGAAATATGTC+AGG	+	chr5_2:2391591-2391610	Msa0749000:exon	30.0%
	ATCAACCAAGAAATATGTCA+GGG	+	chr5_2:2391592-2391611	Msa0749000:exon	30.0%
	TGGAAATGAGTTATGATAAG+TGG	-	chr5_2:2391714-2391733	None:intergenic	30.0%
	CAACTTATGAAAACAGCTTA+TGG	-	chr5_2:2391777-2391796	None:intergenic	30.0%
!	TTACTGTTTGACTCGAAATT+AGG	+	chr5_2:2391864-2391883	Msa0749000:intron	30.0%
!	TACTGTTTGACTCGAAATTA+GGG	+	chr5_2:2391865-2391884	Msa0749000:intron	30.0%
	GCAACATAAAGTAAACTTAG+GGG	+	chr5_2:2391939-2391958	Msa0749000:intron	30.0%
	CAACATAAAGTAAACTTAGG+GGG	+	chr5_2:2391940-2391959	Msa0749000:intron	30.0%
	AAAATAAGACAATGCAAACG+GGG	+	chr5_2:2392204-2392223	Msa0749000:intron	30.0%
	AGATAACTGAATCTGATATC+CGG	+	chr5_2:2392303-2392322	Msa0749000:intron	30.0%
	TTCACCAATTTGACATAATC+AGG	-	chr5_2:2392757-2392776	None:intergenic	30.0%
	ACAAGGAATTGGATAAAACT+AGG	-	chr5_2:2392874-2392893	None:intergenic	30.0%
!!!	TCCCTTTTTTTTTTGTTTGC+AGG	+	chr5_2:2393165-2393184	Msa0749000:intron	30.0%
!!	TTTTTGTTTGCAGGATTTTG+GGG	+	chr5_2:2393174-2393193	Msa0749000:intron	30.0%
!!	AAGTTTTTGTTTGACTGTCA+TGG	+	chr5_2:2393284-2393303	Msa0749000:three_prime_UTR	30.0%
!	CTTTATGAAGTATCTGCTAA+GGG	+	chr5_2:2393314-2393333	Msa0749000:three_prime_UTR	30.0%
	TGCATAAAACAAAATGGAAC+GGG	-	chr5_2:2391548-2391567	None:intergenic	30.0%
	CTGCATAAAACAAAATGGAA+CGG	-	chr5_2:2391549-2391568	None:intergenic	30.0%
!	CTTGGTTGATATAAAAGAGA+TGG	-	chr5_2:2391582-2391601	None:intergenic	30.0%
	TATCAACCAAGAAATATGTC+AGG	+	chr5_2:2391591-2391610	Msa0749000:exon	30.0%
	ATCAACCAAGAAATATGTCA+GGG	+	chr5_2:2391592-2391611	Msa0749000:exon	30.0%
	TGGAAATGAGTTATGATAAG+TGG	-	chr5_2:2391714-2391733	None:intergenic	30.0%
	CAACTTATGAAAACAGCTTA+TGG	-	chr5_2:2391777-2391796	None:intergenic	30.0%
!	TTACTGTTTGACTCGAAATT+AGG	+	chr5_2:2391864-2391883	Msa0749000:intron	30.0%
!	TACTGTTTGACTCGAAATTA+GGG	+	chr5_2:2391865-2391884	Msa0749000:intron	30.0%
	GCAACATAAAGTAAACTTAG+GGG	+	chr5_2:2391939-2391958	Msa0749000:intron	30.0%
	CAACATAAAGTAAACTTAGG+GGG	+	chr5_2:2391940-2391959	Msa0749000:intron	30.0%
	AAAATAAGACAATGCAAACG+GGG	+	chr5_2:2392204-2392223	Msa0749000:intron	30.0%
	AGATAACTGAATCTGATATC+CGG	+	chr5_2:2392303-2392322	Msa0749000:intron	30.0%
	TTCACCAATTTGACATAATC+AGG	-	chr5_2:2392757-2392776	None:intergenic	30.0%
	ACAAGGAATTGGATAAAACT+AGG	-	chr5_2:2392874-2392893	None:intergenic	30.0%
!!!	TCCCTTTTTTTTTTGTTTGC+AGG	+	chr5_2:2393165-2393184	Msa0749000:intron	30.0%
!!	TTTTTGTTTGCAGGATTTTG+GGG	+	chr5_2:2393174-2393193	Msa0749000:intron	30.0%
!!	AAGTTTTTGTTTGACTGTCA+TGG	+	chr5_2:2393284-2393303	Msa0749000:three_prime_UTR	30.0%
!	CTTTATGAAGTATCTGCTAA+GGG	+	chr5_2:2393314-2393333	Msa0749000:three_prime_UTR	30.0%
!!!	CGTTCCATTTTGTTTTATGC+AGG	+	chr5_2:2391547-2391566	Msa0749000:intron	35.0%
	ACATACCCTGACATATTTCT+TGG	-	chr5_2:2391600-2391619	None:intergenic	35.0%
	ATTGTAATTTAGGCCCTGTT+TGG	+	chr5_2:2391668-2391687	Msa0749000:intron	35.0%
	ATCAGATGTTTGTCCAAACA+GGG	-	chr5_2:2391684-2391703	None:intergenic	35.0%
	TATCAGATGTTTGTCCAAAC+AGG	-	chr5_2:2391685-2391704	None:intergenic	35.0%
!!	GCTGTTTTCATAAGTTGTTG+TGG	+	chr5_2:2391780-2391799	Msa0749000:intron	35.0%
	AAATAAGCTGAAGACAGCTA+AGG	+	chr5_2:2391814-2391833	Msa0749000:intron	35.0%
!	ACTGTTTGACTCGAAATTAG+GGG	+	chr5_2:2391866-2391885	Msa0749000:intron	35.0%
!	TCACAACTTTGGGAAACTTA+CGG	+	chr5_2:2391997-2392016	Msa0749000:intron	35.0%
	GTAGTTATTACTAAGGTGAC+CGG	-	chr5_2:2392325-2392344	None:intergenic	35.0%
!	TTTGTTATGCAGTGAAGAAG+AGG	+	chr5_2:2392543-2392562	Msa0749000:intron	35.0%
	CCAATTTGACATAATCAGGT+TGG	-	chr5_2:2392753-2392772	None:intergenic	35.0%
	CCAACCTGATTATGTCAAAT+TGG	+	chr5_2:2392750-2392769	Msa0749000:CDS	35.0%
	ATCAATCTTGCACAACTACA+TGG	-	chr5_2:2393025-2393044	None:intergenic	35.0%
!	TTGTGCAAGATTGATTCAGA+AGG	+	chr5_2:2393030-2393049	Msa0749000:CDS	35.0%
	TTGATTCAGAAGGTAAAGCT+AGG	+	chr5_2:2393040-2393059	Msa0749000:CDS	35.0%
	ATGCTGCAAAACAACATTGT+AGG	-	chr5_2:2393212-2393231	None:intergenic	35.0%
	CCTTAGCAGATACTTCATAA+AGG	-	chr5_2:2393316-2393335	None:intergenic	35.0%
!	CCTTTATGAAGTATCTGCTA+AGG	+	chr5_2:2393313-2393332	Msa0749000:three_prime_UTR	35.0%
!!!	CGTTCCATTTTGTTTTATGC+AGG	+	chr5_2:2391547-2391566	Msa0749000:intron	35.0%
	ACATACCCTGACATATTTCT+TGG	-	chr5_2:2391600-2391619	None:intergenic	35.0%
	ATTGTAATTTAGGCCCTGTT+TGG	+	chr5_2:2391668-2391687	Msa0749000:intron	35.0%
	ATCAGATGTTTGTCCAAACA+GGG	-	chr5_2:2391684-2391703	None:intergenic	35.0%
	TATCAGATGTTTGTCCAAAC+AGG	-	chr5_2:2391685-2391704	None:intergenic	35.0%
!!	GCTGTTTTCATAAGTTGTTG+TGG	+	chr5_2:2391780-2391799	Msa0749000:intron	35.0%
	AAATAAGCTGAAGACAGCTA+AGG	+	chr5_2:2391814-2391833	Msa0749000:intron	35.0%
!	ACTGTTTGACTCGAAATTAG+GGG	+	chr5_2:2391866-2391885	Msa0749000:intron	35.0%
!	TCACAACTTTGGGAAACTTA+CGG	+	chr5_2:2391997-2392016	Msa0749000:intron	35.0%
	GTAGTTATTACTAAGGTGAC+CGG	-	chr5_2:2392325-2392344	None:intergenic	35.0%
!	TTTGTTATGCAGTGAAGAAG+AGG	+	chr5_2:2392543-2392562	Msa0749000:intron	35.0%
	CCAATTTGACATAATCAGGT+TGG	-	chr5_2:2392753-2392772	None:intergenic	35.0%
	CCAACCTGATTATGTCAAAT+TGG	+	chr5_2:2392750-2392769	Msa0749000:CDS	35.0%
	ATCAATCTTGCACAACTACA+TGG	-	chr5_2:2393025-2393044	None:intergenic	35.0%
!	TTGTGCAAGATTGATTCAGA+AGG	+	chr5_2:2393030-2393049	Msa0749000:CDS	35.0%
	TTGATTCAGAAGGTAAAGCT+AGG	+	chr5_2:2393040-2393059	Msa0749000:CDS	35.0%
	ATGCTGCAAAACAACATTGT+AGG	-	chr5_2:2393212-2393231	None:intergenic	35.0%
	CCTTAGCAGATACTTCATAA+AGG	-	chr5_2:2393316-2393335	None:intergenic	35.0%
!	CCTTTATGAAGTATCTGCTA+AGG	+	chr5_2:2393313-2393332	Msa0749000:three_prime_UTR	35.0%
	GGAACACGTCTCAAAGTAAA+TGG	-	chr5_2:2391287-2391306	None:intergenic	40.0%
	TGAGACGTGTTCCGTAAAAT+TGG	+	chr5_2:2391294-2391313	Msa0749000:five_prime_UTR	40.0%
!	CTGTTTGACTCGAAATTAGG+GGG	+	chr5_2:2391867-2391886	Msa0749000:intron	40.0%
	TAAAGTAAACTTAGGGGGCT+TGG	+	chr5_2:2391945-2391964	Msa0749000:intron	40.0%
	GGGGTCAAAATCACAACTTT+GGG	+	chr5_2:2391987-2392006	Msa0749000:intron	40.0%
!	CACAACTTTGGGAAACTTAC+GGG	+	chr5_2:2391998-2392017	Msa0749000:intron	40.0%
!	ACAACTTTGGGAAACTTACG+GGG	+	chr5_2:2391999-2392018	Msa0749000:intron	40.0%
	TGTCTCAAGATTTATGCTCC+TGG	+	chr5_2:2392406-2392425	Msa0749000:intron	40.0%
	AGCTATACATGAGACACACA+AGG	-	chr5_2:2392471-2392490	None:intergenic	40.0%
	AAAGCAGTCATGATGTCCAT+TGG	-	chr5_2:2392613-2392632	None:intergenic	40.0%
	CATAAGCACGAGACTTTCTA+AGG	-	chr5_2:2392645-2392664	None:intergenic	40.0%
	CTTAGAAAGTCTCGTGCTTA+TGG	+	chr5_2:2392643-2392662	Msa0749000:CDS	40.0%
!!	ATCAGGTTGGTCACAATCTT+CGG	-	chr5_2:2392740-2392759	None:intergenic	40.0%
	AATGGATGTGCACAAGGAAT+TGG	-	chr5_2:2392885-2392904	None:intergenic	40.0%
	ATTTGGGAATTGGGAGCAAA+TGG	-	chr5_2:2392903-2392922	None:intergenic	40.0%
	TTCAGAAGGTAAAGCTAGGA+AGG	+	chr5_2:2393044-2393063	Msa0749000:CDS	40.0%
	AATGCTAGTATTTAGACCCG+TGG	-	chr5_2:2391257-2391276	None:intergenic	40.0%
	GGAACACGTCTCAAAGTAAA+TGG	-	chr5_2:2391287-2391306	None:intergenic	40.0%
	TGAGACGTGTTCCGTAAAAT+TGG	+	chr5_2:2391294-2391313	Msa0749000:five_prime_UTR	40.0%
!	CTGTTTGACTCGAAATTAGG+GGG	+	chr5_2:2391867-2391886	Msa0749000:intron	40.0%
	TAAAGTAAACTTAGGGGGCT+TGG	+	chr5_2:2391945-2391964	Msa0749000:intron	40.0%
	GGGGTCAAAATCACAACTTT+GGG	+	chr5_2:2391987-2392006	Msa0749000:intron	40.0%
!	CACAACTTTGGGAAACTTAC+GGG	+	chr5_2:2391998-2392017	Msa0749000:intron	40.0%
!	ACAACTTTGGGAAACTTACG+GGG	+	chr5_2:2391999-2392018	Msa0749000:intron	40.0%
	TGTCTCAAGATTTATGCTCC+TGG	+	chr5_2:2392406-2392425	Msa0749000:intron	40.0%
	AGCTATACATGAGACACACA+AGG	-	chr5_2:2392471-2392490	None:intergenic	40.0%
	AAAGCAGTCATGATGTCCAT+TGG	-	chr5_2:2392613-2392632	None:intergenic	40.0%
	CATAAGCACGAGACTTTCTA+AGG	-	chr5_2:2392645-2392664	None:intergenic	40.0%
	CTTAGAAAGTCTCGTGCTTA+TGG	+	chr5_2:2392643-2392662	Msa0749000:CDS	40.0%
!!	ATCAGGTTGGTCACAATCTT+CGG	-	chr5_2:2392740-2392759	None:intergenic	40.0%
	AATGGATGTGCACAAGGAAT+TGG	-	chr5_2:2392885-2392904	None:intergenic	40.0%
	ATTTGGGAATTGGGAGCAAA+TGG	-	chr5_2:2392903-2392922	None:intergenic	40.0%
	TTCAGAAGGTAAAGCTAGGA+AGG	+	chr5_2:2393044-2393063	Msa0749000:CDS	40.0%
	CAGAGACGGTTTCAATTCGA+TGG	-	chr5_2:2391432-2391451	None:intergenic	45.0%
	AGCTGGTATGTACACTCTCA+CGG	+	chr5_2:2391486-2391505	Msa0749000:intron	45.0%
	GGGCCTGGAAAGTAAACTTT+GGG	+	chr5_2:2391887-2391906	Msa0749000:intron	45.0%
	GGCCTGGAAAGTAAACTTTG+GGG	+	chr5_2:2391888-2391907	Msa0749000:intron	45.0%
	GCCTGGAAAGTAAACTTTGG+GGG	+	chr5_2:2391889-2391908	Msa0749000:intron	45.0%
!!	GTTGCAATTTTAGCCCCTCA+AGG	-	chr5_2:2391924-2391943	None:intergenic	45.0%
	GGGGGTCAAAATCACAACTT+TGG	+	chr5_2:2391986-2392005	Msa0749000:intron	45.0%
	GATAAAACTACGGGCCTAGT+TGG	-	chr5_2:2392237-2392256	None:intergenic	45.0%
	AGAAAGTCTCGTGCTTATGG+TGG	+	chr5_2:2392646-2392665	Msa0749000:CDS	45.0%
	GGTAAAGCTAGGAAGGTTAC+CGG	+	chr5_2:2393051-2393070	Msa0749000:CDS	45.0%
	ATGCTCTTGTGTGGTTGTCA+GGG	+	chr5_2:2393074-2393093	Msa0749000:CDS	45.0%
!!	TTGTTTGCAGGATTTTGGGG+AGG	+	chr5_2:2393177-2393196	Msa0749000:intron	45.0%
	CAGAGACGGTTTCAATTCGA+TGG	-	chr5_2:2391432-2391451	None:intergenic	45.0%
	AGCTGGTATGTACACTCTCA+CGG	+	chr5_2:2391486-2391505	Msa0749000:intron	45.0%
	GGGCCTGGAAAGTAAACTTT+GGG	+	chr5_2:2391887-2391906	Msa0749000:intron	45.0%
	GGCCTGGAAAGTAAACTTTG+GGG	+	chr5_2:2391888-2391907	Msa0749000:intron	45.0%
	GCCTGGAAAGTAAACTTTGG+GGG	+	chr5_2:2391889-2391908	Msa0749000:intron	45.0%
!!	GTTGCAATTTTAGCCCCTCA+AGG	-	chr5_2:2391924-2391943	None:intergenic	45.0%
	GGGGGTCAAAATCACAACTT+TGG	+	chr5_2:2391986-2392005	Msa0749000:intron	45.0%
	GATAAAACTACGGGCCTAGT+TGG	-	chr5_2:2392237-2392256	None:intergenic	45.0%
	AGAAAGTCTCGTGCTTATGG+TGG	+	chr5_2:2392646-2392665	Msa0749000:CDS	45.0%
	GGTAAAGCTAGGAAGGTTAC+CGG	+	chr5_2:2393051-2393070	Msa0749000:CDS	45.0%
	ATGCTCTTGTGTGGTTGTCA+GGG	+	chr5_2:2393074-2393093	Msa0749000:CDS	45.0%
!!	TTGTTTGCAGGATTTTGGGG+AGG	+	chr5_2:2393177-2393196	Msa0749000:intron	45.0%
!!!	TTATTTATTTTATTGATTTT+TGG	+	chr5_2:2392989-2393008	Msa0749000:intron	5.0%
!!!	TATTTATTTTATTGATTTTT+GGG	+	chr5_2:2392990-2393009	Msa0749000:intron	5.0%
!!!	TTATTTATTTTATTGATTTT+TGG	+	chr5_2:2392989-2393008	Msa0749000:intron	5.0%
!!!	TATTTATTTTATTGATTTTT+GGG	+	chr5_2:2392990-2393009	Msa0749000:intron	5.0%
!	GTGAGAGTGTACATACCAGC+TGG	-	chr5_2:2391487-2391506	None:intergenic	50.0%
	GGGGCCTGGAAAGTAAACTT+TGG	+	chr5_2:2391886-2391905	Msa0749000:intron	50.0%
	GCCCCCAAAGTTTACTTTCC+AGG	-	chr5_2:2391893-2391912	None:intergenic	50.0%
	TGGGGGCTAAAATTGCCTTG+AGG	+	chr5_2:2391906-2391925	Msa0749000:intron	50.0%
	GGGGGCTAAAATTGCCTTGA+GGG	+	chr5_2:2391907-2391926	Msa0749000:intron	50.0%
	GGGGCTAAAATTGCCTTGAG+GGG	+	chr5_2:2391908-2391927	Msa0749000:intron	50.0%
	AACGGGGCCTAAATCCAACT+AGG	+	chr5_2:2392220-2392239	Msa0749000:intron	50.0%
	CTACGGGCCTAGTTGGATTT+AGG	-	chr5_2:2392230-2392249	None:intergenic	50.0%
	GGAATTGCAGCAGCAACAAC+AGG	-	chr5_2:2392583-2392602	None:intergenic	50.0%
	GTTGTTGCTGCTGCAATTCC+AGG	+	chr5_2:2392583-2392602	Msa0749000:CDS	50.0%
	CTTGCACGAGGTCTTCATGA+AGG	+	chr5_2:2392670-2392689	Msa0749000:CDS	50.0%
	AACATTGTGCTCTGCGCAGA+GGG	-	chr5_2:2392782-2392801	None:intergenic	50.0%
	TAACATTGTGCTCTGCGCAG+AGG	-	chr5_2:2392783-2392802	None:intergenic	50.0%
	GTTCCAAGTGCAAAGACCCT+TGG	+	chr5_2:2392814-2392833	Msa0749000:CDS	50.0%
	TCTCCAAGGGTCTTTGCACT+TGG	-	chr5_2:2392820-2392839	None:intergenic	50.0%
	TGCAAAGACCCTTGGAGAGT+GGG	+	chr5_2:2392822-2392841	Msa0749000:CDS	50.0%
	GGAGCAAATGGATGTGCACA+AGG	-	chr5_2:2392891-2392910	None:intergenic	50.0%
!!	GACAACCACACAAGAGCATC+CGG	-	chr5_2:2393073-2393092	None:intergenic	50.0%
	GATGCTCTTGTGTGGTTGTC+AGG	+	chr5_2:2393073-2393092	Msa0749000:CDS	50.0%
	CTTGTGTGGTTGTCAGGGTA+TGG	+	chr5_2:2393079-2393098	Msa0749000:intron	50.0%
!	GTGAGAGTGTACATACCAGC+TGG	-	chr5_2:2391487-2391506	None:intergenic	50.0%
	GGGGCCTGGAAAGTAAACTT+TGG	+	chr5_2:2391886-2391905	Msa0749000:intron	50.0%
	GCCCCCAAAGTTTACTTTCC+AGG	-	chr5_2:2391893-2391912	None:intergenic	50.0%
	TGGGGGCTAAAATTGCCTTG+AGG	+	chr5_2:2391906-2391925	Msa0749000:intron	50.0%
	GGGGGCTAAAATTGCCTTGA+GGG	+	chr5_2:2391907-2391926	Msa0749000:intron	50.0%
	GGGGCTAAAATTGCCTTGAG+GGG	+	chr5_2:2391908-2391927	Msa0749000:intron	50.0%
	AACGGGGCCTAAATCCAACT+AGG	+	chr5_2:2392220-2392239	Msa0749000:intron	50.0%
	CTACGGGCCTAGTTGGATTT+AGG	-	chr5_2:2392230-2392249	None:intergenic	50.0%
	GGAATTGCAGCAGCAACAAC+AGG	-	chr5_2:2392583-2392602	None:intergenic	50.0%
	GTTGTTGCTGCTGCAATTCC+AGG	+	chr5_2:2392583-2392602	Msa0749000:CDS	50.0%
	CTTGCACGAGGTCTTCATGA+AGG	+	chr5_2:2392670-2392689	Msa0749000:CDS	50.0%
	AACATTGTGCTCTGCGCAGA+GGG	-	chr5_2:2392782-2392801	None:intergenic	50.0%
	TAACATTGTGCTCTGCGCAG+AGG	-	chr5_2:2392783-2392802	None:intergenic	50.0%
	GTTCCAAGTGCAAAGACCCT+TGG	+	chr5_2:2392814-2392833	Msa0749000:CDS	50.0%
	TCTCCAAGGGTCTTTGCACT+TGG	-	chr5_2:2392820-2392839	None:intergenic	50.0%
	TGCAAAGACCCTTGGAGAGT+GGG	+	chr5_2:2392822-2392841	Msa0749000:CDS	50.0%
	GGAGCAAATGGATGTGCACA+AGG	-	chr5_2:2392891-2392910	None:intergenic	50.0%
!!	GACAACCACACAAGAGCATC+CGG	-	chr5_2:2393073-2393092	None:intergenic	50.0%
	GATGCTCTTGTGTGGTTGTC+AGG	+	chr5_2:2393073-2393092	Msa0749000:CDS	50.0%
	CTTGTGTGGTTGTCAGGGTA+TGG	+	chr5_2:2393079-2393098	Msa0749000:intron	50.0%
!	CGGAGATAGAGGCACAGAGA+CGG	-	chr5_2:2391446-2391465	None:intergenic	55.0%
	TTGCAGGAAGGCGGAGATAG+AGG	-	chr5_2:2391457-2391476	None:intergenic	55.0%
	GGATGCGATTTGCAGGAAGG+CGG	-	chr5_2:2391466-2391485	None:intergenic	55.0%
	GCTGGATGCGATTTGCAGGA+AGG	-	chr5_2:2391469-2391488	None:intergenic	55.0%
	TCCTGCAAATCGCATCCAGC+TGG	+	chr5_2:2391469-2391488	Msa0749000:five_prime_UTR	55.0%
	ACCAGCTGGATGCGATTTGC+AGG	-	chr5_2:2391473-2391492	None:intergenic	55.0%
	TGACTCGAAATTAGGGGGCC+TGG	+	chr5_2:2391872-2391891	Msa0749000:intron	55.0%
	TGCAATTCCAGGCGAGCCAA+TGG	+	chr5_2:2392594-2392613	Msa0749000:CDS	55.0%
!!	ATGATGTCCATTGGCTCGCC+TGG	-	chr5_2:2392604-2392623	None:intergenic	55.0%
!	GCTTATGGTGGTCTTGCACG+AGG	+	chr5_2:2392658-2392677	Msa0749000:CDS	55.0%
	GTGCAAAGACCCTTGGAGAG+TGG	+	chr5_2:2392821-2392840	Msa0749000:CDS	55.0%
	GGTTACCGGATGCTCTTGTG+TGG	+	chr5_2:2393065-2393084	Msa0749000:CDS	55.0%
!	CGGAGATAGAGGCACAGAGA+CGG	-	chr5_2:2391446-2391465	None:intergenic	55.0%
	TTGCAGGAAGGCGGAGATAG+AGG	-	chr5_2:2391457-2391476	None:intergenic	55.0%
	GGATGCGATTTGCAGGAAGG+CGG	-	chr5_2:2391466-2391485	None:intergenic	55.0%
	GCTGGATGCGATTTGCAGGA+AGG	-	chr5_2:2391469-2391488	None:intergenic	55.0%
	TCCTGCAAATCGCATCCAGC+TGG	+	chr5_2:2391469-2391488	Msa0749000:five_prime_UTR	55.0%
	ACCAGCTGGATGCGATTTGC+AGG	-	chr5_2:2391473-2391492	None:intergenic	55.0%
	TGACTCGAAATTAGGGGGCC+TGG	+	chr5_2:2391872-2391891	Msa0749000:intron	55.0%
	TGCAATTCCAGGCGAGCCAA+TGG	+	chr5_2:2392594-2392613	Msa0749000:CDS	55.0%
!!	ATGATGTCCATTGGCTCGCC+TGG	-	chr5_2:2392604-2392623	None:intergenic	55.0%
!	GCTTATGGTGGTCTTGCACG+AGG	+	chr5_2:2392658-2392677	Msa0749000:CDS	55.0%
	GTGCAAAGACCCTTGGAGAG+TGG	+	chr5_2:2392821-2392840	Msa0749000:CDS	55.0%
	GGTTACCGGATGCTCTTGTG+TGG	+	chr5_2:2393065-2393084	Msa0749000:CDS	55.0%
	AAGACCCTTGGAGAGTGGGC+TGG	+	chr5_2:2392826-2392845	Msa0749000:CDS	60.0%
	TACGCCAGCCCACTCTCCAA+GGG	-	chr5_2:2392833-2392852	None:intergenic	60.0%
	TTACGCCAGCCCACTCTCCA+AGG	-	chr5_2:2392834-2392853	None:intergenic	60.0%
	GCAACAAGACTGCGCGAGCA+TGG	-	chr5_2:2392963-2392982	None:intergenic	60.0%
	AAGACCCTTGGAGAGTGGGC+TGG	+	chr5_2:2392826-2392845	Msa0749000:CDS	60.0%
	TACGCCAGCCCACTCTCCAA+GGG	-	chr5_2:2392833-2392852	None:intergenic	60.0%
	TTACGCCAGCCCACTCTCCA+AGG	-	chr5_2:2392834-2392853	None:intergenic	60.0%
	GCAACAAGACTGCGCGAGCA+TGG	-	chr5_2:2392963-2392982	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_2	gene	2391255	2393402	2391255	ID=Msa0749000;Name=Msa0749000
chr5_2	mRNA	2391255	2393402	2391255	ID=Msa0749000-mRNA-1;Parent=Msa0749000;Name=Msa0749000-mRNA-1;_AED=0.02;_eAED=0.02;_QI=273\|1\|1\|1\|1\|0.8\|5\|156\|142
chr5_2	exon	2391255	2391490	2391255	ID=Msa0749000-mRNA-1:exon:712;Parent=Msa0749000-mRNA-1
chr5_2	exon	2391569	2391613	2391569	ID=Msa0749000-mRNA-1:exon:713;Parent=Msa0749000-mRNA-1
chr5_2	exon	2392555	2392849	2392555	ID=Msa0749000-mRNA-1:exon:714;Parent=Msa0749000-mRNA-1
chr5_2	exon	2393030	2393095	2393030	ID=Msa0749000-mRNA-1:exon:715;Parent=Msa0749000-mRNA-1
chr5_2	exon	2393187	2393402	2393187	ID=Msa0749000-mRNA-1:exon:716;Parent=Msa0749000-mRNA-1
chr5_2	five_prime_UTR	2391255	2391490	2391255	ID=Msa0749000-mRNA-1:five_prime_utr;Parent=Msa0749000-mRNA-1
chr5_2	five_prime_UTR	2391569	2391605	2391569	ID=Msa0749000-mRNA-1:five_prime_utr;Parent=Msa0749000-mRNA-1
chr5_2	CDS	2391606	2391613	2391606	ID=Msa0749000-mRNA-1:cds;Parent=Msa0749000-mRNA-1
chr5_2	CDS	2392555	2392849	2392555	ID=Msa0749000-mRNA-1:cds;Parent=Msa0749000-mRNA-1
chr5_2	CDS	2393030	2393095	2393030	ID=Msa0749000-mRNA-1:cds;Parent=Msa0749000-mRNA-1
chr5_2	CDS	2393187	2393246	2393187	ID=Msa0749000-mRNA-1:cds;Parent=Msa0749000-mRNA-1
chr5_2	three_prime_UTR	2393247	2393402	2393247	ID=Msa0749000-mRNA-1:three_prime_utr;Parent=Msa0749000-mRNA-1

Gene Sequence

>Msa0749000

ATGTCAGGTGAAGAAGAGGTTGTTGCAGTTGAGCCTGTTGTTGCTGCTGCAATTCCAGGCGAGCCAATGGACATCATGACTGCTTTACAGCTTGTCCTTAGAAAGTCTCGTGCTTATGGTGGTCTTGCACGAGGTCTTCATGAAGGTGCAAAAGTGATTGAGAAGCATGCTGCACAGCTTTGTGTTCTAGCCGAAGATTGTGACCAACCTGATTATGTCAAATTGGTGAAAGCCCTCTGCGCAGAGCACAATGTTAGCTTGTTGACAGTTCCAAGTGCAAAGACCCTTGGAGAGTGGGCTGGCTTGTGCAAGATTGATTCAGAAGGTAAAGCTAGGAAGGTTACCGGATGCTCTTGTGTGGTTGTCAGGGATTTTGGGGAGGAACACGAAGCCTACAATGTTGTTTTGCAGCATGTAAAAGCTAACTAA

Protein sequence

>Msa0749000

MSGEEEVVAVEPVVAAAIPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVRDFGEEHEAYNVVLQHVKAN*