Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116450 | XP_003625273.1 | 84.548 | 343 | 45 | 3 | 1 | 340 | 1 | 338 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116450 | G7KVE9 | 84.548 | 343 | 45 | 3 | 1 | 340 | 1 | 338 | 0.0 | 546 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0022310 | Msa1116450 | 0.804860 | 1.763761e-49 | -8.615850e-47 |
| Msa0042550 | Msa1116450 | 0.817939 | 2.542664e-52 | -8.615850e-47 |
| Msa0613460 | Msa1116450 | 0.823992 | 1.027612e-53 | -8.615850e-47 |
| Msa0615010 | Msa1116450 | 0.806681 | 7.309563e-50 | -8.615850e-47 |
| Msa0653440 | Msa1116450 | 0.825159 | 5.455612e-54 | -8.615850e-47 |
| Msa0654010 | Msa1116450 | 0.819059 | 1.416471e-52 | -8.615850e-47 |
| Msa0658570 | Msa1116450 | 0.811247 | 7.702254e-51 | -8.615850e-47 |
| Msa0691050 | Msa1116450 | 0.806885 | 6.618463e-50 | -8.615850e-47 |
| Msa0693380 | Msa1116450 | 0.809540 | 1.798996e-50 | -8.615850e-47 |
| Msa0695870 | Msa1116450 | 0.842964 | 1.874186e-58 | -8.615850e-47 |
| Msa0718070 | Msa1116450 | 0.802793 | 4.739731e-49 | -8.615850e-47 |
| Msa0724210 | Msa1116450 | 0.821588 | 3.728281e-53 | -8.615850e-47 |
| Msa0725760 | Msa1116450 | 0.802096 | 6.597412e-49 | -8.615850e-47 |
| Msa0731940 | Msa1116450 | 0.822329 | 2.510409e-53 | -8.615850e-47 |
| Msa0760130 | Msa1116450 | 0.803545 | 3.312178e-49 | -8.615850e-47 |
| Msa0766360 | Msa1116450 | 0.819235 | 1.291601e-52 | -8.615850e-47 |
| Msa0766630 | Msa1116450 | 0.826213 | 3.069312e-54 | -8.615850e-47 |
| Msa0795070 | Msa1116450 | 0.804605 | 1.993630e-49 | -8.615850e-47 |
| Msa0800770 | Msa1116450 | 0.854089 | 1.552035e-61 | -8.615850e-47 |
| Msa0810220 | Msa1116450 | 0.822043 | 2.926091e-53 | -8.615850e-47 |
| Msa0838930 | Msa1116450 | 0.858506 | 7.859930e-63 | -8.615850e-47 |
| Msa0169820 | Msa1116450 | 0.804871 | 1.754464e-49 | -8.615850e-47 |
| Msa0178510 | Msa1116450 | 0.809397 | 1.930606e-50 | -8.615850e-47 |
| Msa0187030 | Msa1116450 | 0.803110 | 4.075217e-49 | -8.615850e-47 |
| Msa0191890 | Msa1116450 | 0.816853 | 4.464407e-52 | -8.615850e-47 |
| Msa0229590 | Msa1116450 | 0.805307 | 1.421918e-49 | -8.615850e-47 |
| Msa0376590 | Msa1116450 | 0.824156 | 9.400903e-54 | -8.615850e-47 |
| Msa0381610 | Msa1116450 | -0.805057 | 1.603853e-49 | -8.615850e-47 |
| Msa0422280 | Msa1116450 | 0.810819 | 9.537115e-51 | -8.615850e-47 |
| Msa0436370 | Msa1116450 | 0.836579 | 8.612926e-57 | -8.615850e-47 |
| Msa0468800 | Msa1116450 | 0.813275 | 2.780258e-51 | -8.615850e-47 |
| Msa1003620 | Msa1116450 | 0.801097 | 1.057189e-48 | -8.615850e-47 |
| Msa1014540 | Msa1116450 | 0.814047 | 1.879489e-51 | -8.615850e-47 |
| Msa1023950 | Msa1116450 | 0.808941 | 2.418048e-50 | -8.615850e-47 |
| Msa1035300 | Msa1116450 | 0.895663 | 7.741154e-76 | -8.615850e-47 |
| Msa1035310 | Msa1116450 | 0.804760 | 1.850866e-49 | -8.615850e-47 |
| Msa1075220 | Msa1116450 | -0.800728 | 1.257984e-48 | -8.615850e-47 |
| Msa1075390 | Msa1116450 | 0.927673 | 8.467267e-92 | -8.615850e-47 |
| Msa1075650 | Msa1116450 | 0.800753 | 1.242812e-48 | -8.615850e-47 |
| Msa1076700 | Msa1116450 | 0.803272 | 3.772693e-49 | -8.615850e-47 |
| Msa1080960 | Msa1116450 | 0.813566 | 2.398778e-51 | -8.615850e-47 |
| Msa1084260 | Msa1116450 | 0.822013 | 2.973167e-53 | -8.615850e-47 |
| Msa0249560 | Msa1116450 | 0.814032 | 1.893850e-51 | -8.615850e-47 |
| Msa0264780 | Msa1116450 | 0.803602 | 3.222942e-49 | -8.615850e-47 |
| Msa0285450 | Msa1116450 | 0.817189 | 3.751511e-52 | -8.615850e-47 |
| Msa0326520 | Msa1116450 | 0.824133 | 9.520699e-54 | -8.615850e-47 |
| Msa1116440 | Msa1116450 | 0.818122 | 2.311219e-52 | -8.615850e-47 |
| Msa1116450 | Msa1118760 | 0.824004 | 1.020626e-53 | -8.615850e-47 |
| Msa1116450 | Msa1121490 | 0.810609 | 1.058745e-50 | -8.615850e-47 |
| Msa1116450 | Msa1162550 | -0.805215 | 1.486201e-49 | -8.615850e-47 |
| Msa1116450 | Msa1229600 | 0.810091 | 1.369728e-50 | -8.615850e-47 |
| Msa1116450 | Msa1239720 | 0.807964 | 3.908847e-50 | -8.615850e-47 |
| Msa1116450 | Msa1282580 | -0.808772 | 2.627631e-50 | -8.615850e-47 |
| Msa1116450 | Msa1297310 | 0.800350 | 1.502124e-48 | -8.615850e-47 |
| Msa1116450 | Msa1310210 | 0.802936 | 4.428148e-49 | -8.615850e-47 |
| Msa1116450 | Msa1372150 | 0.817448 | 3.280509e-52 | -8.615850e-47 |
| Msa1116450 | Msa1376890 | 0.811748 | 5.993586e-51 | -8.615850e-47 |
| Msa1116450 | Msa1379850 | 0.837861 | 4.049439e-57 | -8.615850e-47 |
| Msa1116450 | Msa1393410 | 0.816293 | 5.957533e-52 | -8.615850e-47 |
| Msa1116450 | Msa1401270 | 0.818371 | 2.029469e-52 | -8.615850e-47 |
| Msa1116450 | Msa1413610 | 0.814796 | 1.283876e-51 | -8.615850e-47 |
| Msa1116450 | Msa1435420 | 0.817956 | 2.519807e-52 | -8.615850e-47 |
| Msa1116450 | Msa1440740 | 0.832158 | 1.108977e-55 | -8.615850e-47 |
| Msa0516370 | Msa1116450 | 0.826252 | 3.003364e-54 | -8.615850e-47 |
| Msa0558690 | Msa1116450 | 0.807637 | 4.585770e-50 | -8.615850e-47 |
| Msa0559500 | Msa1116450 | 0.807946 | 3.942273e-50 | -8.615850e-47 |
| Msa0567020 | Msa1116450 | 0.804929 | 1.705697e-49 | -8.615850e-47 |
| Msa0572420 | Msa1116450 | 0.813254 | 2.809630e-51 | -8.615850e-47 |
| Msa0572480 | Msa1116450 | 0.832090 | 1.152769e-55 | -8.615850e-47 |
| Msa0574760 | Msa1116450 | -0.807497 | 4.911536e-50 | -8.615850e-47 |
| Msa0598780 | Msa1116450 | 0.804877 | 1.749194e-49 | -8.615850e-47 |
| Msa0857220 | Msa1116450 | 0.805101 | 1.570623e-49 | -8.615850e-47 |
| Msa0870530 | Msa1116450 | 0.820761 | 5.783467e-53 | -8.615850e-47 |
| Msa0903700 | Msa1116450 | 0.811589 | 6.490937e-51 | -8.615850e-47 |
| Msa0930910 | Msa1116450 | -0.805293 | 1.431702e-49 | -8.615850e-47 |
| Msa0935910 | Msa1116450 | 0.823046 | 1.709686e-53 | -8.615850e-47 |
| Msa0936210 | Msa1116450 | 0.819309 | 1.242944e-52 | -8.615850e-47 |
| Msa0975220 | Msa1116450 | 0.802887 | 4.532339e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116450 | MtrunA17_Chr7g0258791 | 84.548 | 343 | 45 | 3 | 1 | 340 | 1 | 338 | 0.0 | 546 |
| Msa1116450 | MtrunA17_Chr7g0258801 | 84.928 | 345 | 44 | 4 | 1 | 340 | 1 | 342 | 0.0 | 506 |
| Msa1116450 | MtrunA17_Chr1g0175521 | 49.714 | 350 | 131 | 14 | 1 | 340 | 1 | 315 | 2.76e-79 | 244 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116450 | AT2G42040.1 | 51.667 | 120 | 18 | 2 | 210 | 329 | 163 | 242 | 4.55e-22 | 94.4 |
Find 87 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGAAAAGAAAACCATTTA+TGG | 0.110417 | 7_3:-64002030 | Msa1116450:CDS |
| TTTAAGAATTTCTATTATTT+TGG | 0.160442 | 7_3:-64001798 | Msa1116450:three_prime_UTR |
| CTTAAGCTTGTGCTTTATTT+TGG | 0.161665 | 7_3:-64001731 | Msa1116450:three_prime_UTR |
| CCGATCTATGAGCAGCTTAT+TGG | 0.190529 | 7_3:-64001923 | Msa1116450:CDS |
| CTTATCATCATTCCCATAAA+TGG | 0.191015 | 7_3:+64002017 | None:intergenic |
| TCACTTTGTGAGCATCATTT+AGG | 0.197238 | 7_3:-64002177 | Msa1116450:CDS |
| TCATCTAGTGGTCTACTATA+TGG | 0.258383 | 7_3:+64003781 | None:intergenic |
| TAAAGAAGAAGGTGACAAAA+AGG | 0.274515 | 7_3:-64002284 | Msa1116450:CDS |
| CACTTTGTGAGCATCATTTA+GGG | 0.276622 | 7_3:-64002176 | Msa1116450:CDS |
| AGACTTTGTTTAGAAGATAA+AGG | 0.315376 | 7_3:+64003691 | None:intergenic |
| TTGCAGGATGAGAAAGTTAG+AGG | 0.316905 | 7_3:-64003058 | Msa1116450:intron |
| TTAGAAGATAAAGGATCTTT+TGG | 0.323095 | 7_3:+64003700 | None:intergenic |
| TCAAGGTGCAGTCGTGTTAA+TGG | 0.325264 | 7_3:-64002240 | Msa1116450:CDS |
| CAAGCTTAAGTTGAATATAT+AGG | 0.334969 | 7_3:+64001744 | None:intergenic |
| AATTAGTACTTAGAGGTCTT+AGG | 0.338263 | 7_3:+64001675 | None:intergenic |
| CGATCTATGAGCAGCTTATT+GGG | 0.339222 | 7_3:-64001922 | Msa1116450:CDS |
| GTTAGAAATAGATCTAATAT+TGG | 0.340191 | 7_3:-64002126 | Msa1116450:CDS |
| TTGAAAAGAAAACCATTTAT+GGG | 0.365020 | 7_3:-64002029 | Msa1116450:CDS |
| GATGAATAAGAAGTGTTCTC+TGG | 0.367764 | 7_3:-64002349 | Msa1116450:CDS |
| GAGAGTGAATCTCGTGAGTT+TGG | 0.367790 | 7_3:-64003654 | Msa1116450:five_prime_UTR |
| AGAACACTTCTTATTCATCT+TGG | 0.397343 | 7_3:+64002353 | None:intergenic |
| GCTCAACAAGCTAGATCCTT+TGG | 0.399719 | 7_3:-64003321 | Msa1116450:intron |
| CAATAGTAATTAGTACTTAG+AGG | 0.402413 | 7_3:+64001668 | None:intergenic |
| ATAACAAAAGTAATCATATC+AGG | 0.406726 | 7_3:-64003015 | Msa1116450:intron |
| AAGCTTAAGTTGAATATATA+GGG | 0.407633 | 7_3:+64001745 | None:intergenic |
| TGTTTCAGCTTGTTTGAACT+TGG | 0.409598 | 7_3:-64003444 | Msa1116450:CDS |
| ATTATCATTACATGTATTTG+AGG | 0.413343 | 7_3:-64001836 | Msa1116450:three_prime_UTR |
| GATTGTGAAGAACAAGGTTT+TGG | 0.415228 | 7_3:+64003476 | None:intergenic |
| AACGGCTATGATTATCCATC+TGG | 0.442160 | 7_3:-64003371 | Msa1116450:CDS |
| CATCTAGTGGTCTACTATAT+GGG | 0.445587 | 7_3:+64003782 | None:intergenic |
| TGTTGTCAACAAACACTTGT+TGG | 0.452218 | 7_3:-64002204 | Msa1116450:CDS |
| ACTTAGCAATGGAGACATCT+TGG | 0.459465 | 7_3:-64002624 | Msa1116450:intron |
| ATCAAACACTCCCACTGATC+GGG | 0.459647 | 7_3:-64003403 | Msa1116450:CDS |
| AAGGTTCGAGAGTAATGGTA+TGG | 0.464503 | 7_3:-64002415 | Msa1116450:CDS |
| AGAAAAGAACTTGTCTCTTA+CGG | 0.470316 | 7_3:+64003585 | None:intergenic |
| ATGAATAAGAAGTGTTCTCT+GGG | 0.474459 | 7_3:-64002348 | Msa1116450:CDS |
| CAATAAGCTGCTCATAGATC+GGG | 0.475860 | 7_3:+64001924 | None:intergenic |
| CCAATAAGCTGCTCATAGAT+CGG | 0.476576 | 7_3:+64001923 | None:intergenic |
| TTATGGGAATGATGATAAGT+TGG | 0.486486 | 7_3:-64002013 | Msa1116450:CDS |
| AGAGGAGAAGAGAAAGAGAG+TGG | 0.488117 | 7_3:-64003040 | Msa1116450:CDS |
| TTGTCTCTTACGGATCCTCA+TGG | 0.491763 | 7_3:+64003595 | None:intergenic |
| AAGCTATTCCCATAAAGAAA+AGG | 0.492126 | 7_3:-64002443 | Msa1116450:CDS |
| AAAAGTGAATATAAAGAAGA+AGG | 0.502625 | 7_3:-64002295 | Msa1116450:CDS |
| TGTTCAGAAGAGCTTGATGA+TGG | 0.502827 | 7_3:+64002584 | None:intergenic |
| TGCAGTCGTGTTAATGGAAG+AGG | 0.503807 | 7_3:-64002234 | Msa1116450:CDS |
| TGTTTAGTTTCCCGATCAGT+GGG | 0.515803 | 7_3:+64003393 | None:intergenic |
| TTGTTTAGTTTCCCGATCAG+TGG | 0.522558 | 7_3:+64003392 | None:intergenic |
| GTGCACTGATGGAAGGTTCA+AGG | 0.526939 | 7_3:-64002257 | Msa1116450:CDS |
| CGGTGACTGGTTCATCATGT+GGG | 0.530912 | 7_3:+64003523 | None:intergenic |
| CATCTGGTCTTGAGGAAAGT+GGG | 0.531376 | 7_3:-64003355 | Msa1116450:CDS |
| CCATCTGGTCTTGAGGAAAG+TGG | 0.536650 | 7_3:-64003356 | Msa1116450:CDS |
| GATCAAACACTCCCACTGAT+CGG | 0.538484 | 7_3:-64003404 | Msa1116450:CDS |
| TGTGAGCATCATTTAGGGAA+AGG | 0.539369 | 7_3:-64002171 | Msa1116450:CDS |
| GCAAAGAAAAGAATGAAGCT+TGG | 0.541339 | 7_3:-64001958 | Msa1116450:CDS |
| AAAGGAAGGTTCGAGAGTAA+TGG | 0.542768 | 7_3:-64002420 | Msa1116450:CDS |
| GTTGCACCACCATCGGTGAC+TGG | 0.543665 | 7_3:+64003510 | None:intergenic |
| TCGGTGACTGGTTCATCATG+TGG | 0.550743 | 7_3:+64003522 | None:intergenic |
| AGTGGGAGTGTTTGATCAGA+CGG | 0.568378 | 7_3:+64003410 | None:intergenic |
| GAAAAGAATGAAGCTTGGAA+TGG | 0.573593 | 7_3:-64001953 | Msa1116450:CDS |
| TAATGATAGTAAGAAAGTGA+AGG | 0.575995 | 7_3:-64002388 | Msa1116450:CDS |
| TCACCGATGGTGGTGCAACT+TGG | 0.576709 | 7_3:-64003506 | Msa1116450:CDS |
| CCACTTTCCTCAAGACCAGA+TGG | 0.583116 | 7_3:+64003356 | None:intergenic |
| TGATTATCCATCTGGTCTTG+AGG | 0.584674 | 7_3:-64003363 | Msa1116450:CDS |
| TGTCTCTTACGGATCCTCAT+GGG | 0.584685 | 7_3:+64003596 | None:intergenic |
| GTATATATGTAGATGGGAGA+TGG | 0.585131 | 7_3:-64002479 | Msa1116450:intron |
| CCATAAAGAAAAGGAAAGGA+AGG | 0.590406 | 7_3:-64002434 | Msa1116450:CDS |
| TCACCAAGTTGCACCACCAT+CGG | 0.594191 | 7_3:+64003503 | None:intergenic |
| ATTCCCATAAAGAAAAGGAA+AGG | 0.595849 | 7_3:-64002438 | Msa1116450:CDS |
| CTTTCAATCTTGCACCCATG+AGG | 0.597455 | 7_3:-64003610 | Msa1116450:exon |
| GTGTTAATGGAAGAGGATGG+AGG | 0.605411 | 7_3:-64002227 | Msa1116450:CDS |
| AGGGGAAGTGCACTGATGGA+AGG | 0.609317 | 7_3:-64002264 | Msa1116450:CDS |
| TCATCAAGCTCTTCTGAACA+AGG | 0.621692 | 7_3:-64002581 | Msa1116450:intron |
| ATCTGGTCTTGAGGAAAGTG+GGG | 0.630940 | 7_3:-64003354 | Msa1116450:CDS |
| CATGATGAACCAGTCACCGA+TGG | 0.633305 | 7_3:-64003519 | Msa1116450:CDS |
| TGTTGTGATTGTGAAGAACA+AGG | 0.634928 | 7_3:+64003470 | None:intergenic |
| GTAGATGGGAGATGGTGTGA+GGG | 0.636074 | 7_3:-64002471 | Msa1116450:intron |
| TGTAGATGGGAGATGGTGTG+AGG | 0.639136 | 7_3:-64002472 | Msa1116450:intron |
| GATGGTGGTGCAACTTGGTG+AGG | 0.640589 | 7_3:-64003501 | Msa1116450:CDS |
| GGTGACTGGTTCATCATGTG+GGG | 0.651550 | 7_3:+64003524 | None:intergenic |
| ATGGTGGTGCAACTTGGTGA+GGG | 0.654742 | 7_3:-64003500 | Msa1116450:CDS |
| ATTGGGACAGACAGACAACA+AGG | 0.664244 | 7_3:-64001905 | Msa1116450:CDS |
| TGGGGATCTGAGAGATGCAA+AGG | 0.665335 | 7_3:+64003542 | None:intergenic |
| AGATGAGTAAACTCATCTAG+TGG | 0.665874 | 7_3:+64003769 | None:intergenic |
| GTCGTGTTAATGGAAGAGGA+TGG | 0.680449 | 7_3:-64002230 | Msa1116450:CDS |
| CTGATCGGGAAACTAAACAA+CGG | 0.695161 | 7_3:-64003389 | Msa1116450:CDS |
| GATGAACCAGTCACCGATGG+TGG | 0.720438 | 7_3:-64003516 | Msa1116450:CDS |
| TGAATAAGAAGTGTTCTCTG+GGG | 0.734621 | 7_3:-64002347 | Msa1116450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAATAATAAAATCAAAA+TGG | + | chr7_3:64002187-64002206 | None:intergenic | 10.0% |
| !!! | TTTAAGAATTTCTATTATTT+TGG | - | chr7_3:64003671-64003690 | Msa1116450:five_prime_UTR | 10.0% |
| !! | TAAGAATAATAAAATCAAAA+TGG | + | chr7_3:64002187-64002206 | None:intergenic | 10.0% |
| !!! | TTTAAGAATTTCTATTATTT+TGG | - | chr7_3:64003671-64003690 | Msa1116450:five_prime_UTR | 10.0% |
| !!! | AACTAATACATTTTTCTTTT+AGG | + | chr7_3:64002555-64002574 | None:intergenic | 15.0% |
| !! | TTTATTCAAAAATATAGCAA+TGG | - | chr7_3:64002577-64002596 | Msa1116450:intron | 15.0% |
| !! | ATAAACAATATACATATACA+TGG | + | chr7_3:64002939-64002958 | None:intergenic | 15.0% |
| !! | TTTATAAGTATATATGTAGA+TGG | - | chr7_3:64002983-64003002 | Msa1116450:intron | 15.0% |
| !! | TTATAAGTATATATGTAGAT+GGG | - | chr7_3:64002984-64003003 | Msa1116450:intron | 15.0% |
| !!! | ATAATTTTGTTGTAATCTTT+CGG | + | chr7_3:64003618-64003637 | None:intergenic | 15.0% |
| !!! | AACTAATACATTTTTCTTTT+AGG | + | chr7_3:64002555-64002574 | None:intergenic | 15.0% |
| !! | TTTATTCAAAAATATAGCAA+TGG | - | chr7_3:64002577-64002596 | Msa1116450:intron | 15.0% |
| !! | ATAAACAATATACATATACA+TGG | + | chr7_3:64002939-64002958 | None:intergenic | 15.0% |
| !! | TTTATAAGTATATATGTAGA+TGG | - | chr7_3:64002983-64003002 | Msa1116450:intron | 15.0% |
| !! | TTATAAGTATATATGTAGAT+GGG | - | chr7_3:64002984-64003003 | Msa1116450:intron | 15.0% |
| !!! | ATAATTTTGTTGTAATCTTT+CGG | + | chr7_3:64003618-64003637 | None:intergenic | 15.0% |
| !!! | TTGTTTAATTGTTTCTGATT+TGG | - | chr7_3:64002227-64002246 | Msa1116450:CDS | 20.0% |
| !!! | TGTTTAATTGTTTCTGATTT+GGG | - | chr7_3:64002228-64002247 | Msa1116450:CDS | 20.0% |
| !!! | TATATTGTATCCATGTATTT+TGG | - | chr7_3:64002372-64002391 | Msa1116450:CDS | 20.0% |
| !! | ATAACAAAAGTAATCATATC+AGG | - | chr7_3:64002454-64002473 | Msa1116450:CDS | 20.0% |
| !!! | ATTTTAGAGATAAGAAAGAT+GGG | + | chr7_3:64002644-64002663 | None:intergenic | 20.0% |
| !!! | ATCTTTCTTATCTCTAAAAT+GGG | - | chr7_3:64002644-64002663 | Msa1116450:intron | 20.0% |
| !!! | ATTAACGAAATTTAGAACAT+AGG | + | chr7_3:64002797-64002816 | None:intergenic | 20.0% |
| !! | ATGTATATTGTTTATGAGAA+TGG | - | chr7_3:64002944-64002963 | Msa1116450:intron | 20.0% |
| !! | AAAAGTGAATATAAAGAAGA+AGG | - | chr7_3:64003174-64003193 | Msa1116450:intron | 20.0% |
| !! | GTTAGAAATAGATCTAATAT+TGG | - | chr7_3:64003343-64003362 | Msa1116450:CDS | 20.0% |
| !! | TTGAAAAGAAAACCATTTAT+GGG | - | chr7_3:64003440-64003459 | Msa1116450:CDS | 20.0% |
| !! | ATTATCATTACATGTATTTG+AGG | - | chr7_3:64003633-64003652 | Msa1116450:five_prime_UTR | 20.0% |
| !!! | AAGCTTAAGTTGAATATATA+GGG | + | chr7_3:64003727-64003746 | None:intergenic | 20.0% |
| !!! | TTGTTTAATTGTTTCTGATT+TGG | - | chr7_3:64002227-64002246 | Msa1116450:CDS | 20.0% |
| !!! | TGTTTAATTGTTTCTGATTT+GGG | - | chr7_3:64002228-64002247 | Msa1116450:CDS | 20.0% |
| !!! | TATATTGTATCCATGTATTT+TGG | - | chr7_3:64002372-64002391 | Msa1116450:CDS | 20.0% |
| !! | ATAACAAAAGTAATCATATC+AGG | - | chr7_3:64002454-64002473 | Msa1116450:CDS | 20.0% |
| !!! | ATTTTAGAGATAAGAAAGAT+GGG | + | chr7_3:64002644-64002663 | None:intergenic | 20.0% |
| !!! | ATCTTTCTTATCTCTAAAAT+GGG | - | chr7_3:64002644-64002663 | Msa1116450:intron | 20.0% |
| !!! | ATTAACGAAATTTAGAACAT+AGG | + | chr7_3:64002797-64002816 | None:intergenic | 20.0% |
| !! | ATGTATATTGTTTATGAGAA+TGG | - | chr7_3:64002944-64002963 | Msa1116450:intron | 20.0% |
| !! | AAAAGTGAATATAAAGAAGA+AGG | - | chr7_3:64003174-64003193 | Msa1116450:intron | 20.0% |
| !! | GTTAGAAATAGATCTAATAT+TGG | - | chr7_3:64003343-64003362 | Msa1116450:CDS | 20.0% |
| !! | TTGAAAAGAAAACCATTTAT+GGG | - | chr7_3:64003440-64003459 | Msa1116450:CDS | 20.0% |
| !! | ATTATCATTACATGTATTTG+AGG | - | chr7_3:64003633-64003652 | Msa1116450:five_prime_UTR | 20.0% |
| !!! | AAGCTTAAGTTGAATATATA+GGG | + | chr7_3:64003727-64003746 | None:intergenic | 20.0% |
| !! | TTAGAAGATAAAGGATCTTT+TGG | + | chr7_3:64001772-64001791 | None:intergenic | 25.0% |
| !! | AGACTTTGTTTAGAAGATAA+AGG | + | chr7_3:64001781-64001800 | None:intergenic | 25.0% |
| ! | TAAATAAATTTGACACCAAG+AGG | + | chr7_3:64002295-64002314 | None:intergenic | 25.0% |
| !!! | CATTTTAGAGATAAGAAAGA+TGG | + | chr7_3:64002645-64002664 | None:intergenic | 25.0% |
| !! | CATCTTTCTTATCTCTAAAA+TGG | - | chr7_3:64002643-64002662 | Msa1116450:intron | 25.0% |
| ! | TAATGATAGTAAGAAAGTGA+AGG | - | chr7_3:64003081-64003100 | Msa1116450:intron | 25.0% |
| ! | CTTGAAAAGAAAACCATTTA+TGG | - | chr7_3:64003439-64003458 | Msa1116450:CDS | 25.0% |
| !! | CTTTTCTTTGCAATTATTAG+TGG | + | chr7_3:64003502-64003521 | None:intergenic | 25.0% |
| !!! | CAAGCTTAAGTTGAATATAT+AGG | + | chr7_3:64003728-64003747 | None:intergenic | 25.0% |
| ! | CAATAGTAATTAGTACTTAG+AGG | + | chr7_3:64003804-64003823 | None:intergenic | 25.0% |
| !! | TTAGAAGATAAAGGATCTTT+TGG | + | chr7_3:64001772-64001791 | None:intergenic | 25.0% |
| !! | AGACTTTGTTTAGAAGATAA+AGG | + | chr7_3:64001781-64001800 | None:intergenic | 25.0% |
| ! | TAAATAAATTTGACACCAAG+AGG | + | chr7_3:64002295-64002314 | None:intergenic | 25.0% |
| !!! | CATTTTAGAGATAAGAAAGA+TGG | + | chr7_3:64002645-64002664 | None:intergenic | 25.0% |
| !! | CATCTTTCTTATCTCTAAAA+TGG | - | chr7_3:64002643-64002662 | Msa1116450:intron | 25.0% |
| ! | TAATGATAGTAAGAAAGTGA+AGG | - | chr7_3:64003081-64003100 | Msa1116450:intron | 25.0% |
| ! | CTTGAAAAGAAAACCATTTA+TGG | - | chr7_3:64003439-64003458 | Msa1116450:CDS | 25.0% |
| !! | CTTTTCTTTGCAATTATTAG+TGG | + | chr7_3:64003502-64003521 | None:intergenic | 25.0% |
| !!! | CAAGCTTAAGTTGAATATAT+AGG | + | chr7_3:64003728-64003747 | None:intergenic | 25.0% |
| ! | CAATAGTAATTAGTACTTAG+AGG | + | chr7_3:64003804-64003823 | None:intergenic | 25.0% |
| AGAAAAGAACTTGTCTCTTA+CGG | + | chr7_3:64001887-64001906 | None:intergenic | 30.0% | |
| !!! | TGGTTTTTTTGACTTACCAA+AGG | + | chr7_3:64002167-64002186 | None:intergenic | 30.0% |
| AAATAATTTCACACCCAGAA+AGG | - | chr7_3:64002344-64002363 | Msa1116450:CDS | 30.0% | |
| AATAATTTCACACCCAGAAA+GGG | - | chr7_3:64002345-64002364 | Msa1116450:CDS | 30.0% | |
| ACAATATAAGAACCCTTTCT+GGG | + | chr7_3:64002360-64002379 | None:intergenic | 30.0% | |
| TACAATATAAGAACCCTTTC+TGG | + | chr7_3:64002361-64002380 | None:intergenic | 30.0% | |
| !!! | TGTATCCATGTATTTTGGTA+TGG | - | chr7_3:64002377-64002396 | Msa1116450:CDS | 30.0% |
| ATCAACCATACCAAAATACA+TGG | + | chr7_3:64002385-64002404 | None:intergenic | 30.0% | |
| !!! | TATGGTTGATTTGATTTTGC+AGG | - | chr7_3:64002395-64002414 | Msa1116450:CDS | 30.0% |
| !! | ACATTTTTCTTTTAGGAAGC+TGG | + | chr7_3:64002548-64002567 | None:intergenic | 30.0% |
| ! | TAAGAAAGATGGGCTTAATT+TGG | + | chr7_3:64002634-64002653 | None:intergenic | 30.0% |
| CATTATTGTTGAGGAACAAA+GGG | + | chr7_3:64002731-64002750 | None:intergenic | 30.0% | |
| ACATTATTGTTGAGGAACAA+AGG | + | chr7_3:64002732-64002751 | None:intergenic | 30.0% | |
| !!! | GTGTGATTTTTGGTCTTTTT+GGG | - | chr7_3:64002819-64002838 | Msa1116450:intron | 30.0% |
| AAGCTATTCCCATAAAGAAA+AGG | - | chr7_3:64003026-64003045 | Msa1116450:CDS | 30.0% | |
| ATTCCCATAAAGAAAAGGAA+AGG | - | chr7_3:64003031-64003050 | Msa1116450:CDS | 30.0% | |
| ! | CTTCCTTTCCTTTTCTTTAT+GGG | + | chr7_3:64003037-64003056 | None:intergenic | 30.0% |
| AGAACACTTCTTATTCATCT+TGG | + | chr7_3:64003119-64003138 | None:intergenic | 30.0% | |
| !! | ATGAATAAGAAGTGTTCTCT+GGG | - | chr7_3:64003121-64003140 | Msa1116450:intron | 30.0% |
| TAAAGAAGAAGGTGACAAAA+AGG | - | chr7_3:64003185-64003204 | Msa1116450:intron | 30.0% | |
| AAAGAAGAAGGTGACAAAAA+GGG | - | chr7_3:64003186-64003205 | Msa1116450:intron | 30.0% | |
| CTTATCATCATTCCCATAAA+TGG | + | chr7_3:64003455-64003474 | None:intergenic | 30.0% | |
| TTATGGGAATGATGATAAGT+TGG | - | chr7_3:64003456-64003475 | Msa1116450:CDS | 30.0% | |
| !!! | CTTAAGCTTGTGCTTTATTT+TGG | - | chr7_3:64003738-64003757 | Msa1116450:five_prime_UTR | 30.0% |
| AATTAGTACTTAGAGGTCTT+AGG | + | chr7_3:64003797-64003816 | None:intergenic | 30.0% | |
| AGAAAAGAACTTGTCTCTTA+CGG | + | chr7_3:64001887-64001906 | None:intergenic | 30.0% | |
| !!! | TGGTTTTTTTGACTTACCAA+AGG | + | chr7_3:64002167-64002186 | None:intergenic | 30.0% |
| AAATAATTTCACACCCAGAA+AGG | - | chr7_3:64002344-64002363 | Msa1116450:CDS | 30.0% | |
| AATAATTTCACACCCAGAAA+GGG | - | chr7_3:64002345-64002364 | Msa1116450:CDS | 30.0% | |
| ACAATATAAGAACCCTTTCT+GGG | + | chr7_3:64002360-64002379 | None:intergenic | 30.0% | |
| TACAATATAAGAACCCTTTC+TGG | + | chr7_3:64002361-64002380 | None:intergenic | 30.0% | |
| !!! | TGTATCCATGTATTTTGGTA+TGG | - | chr7_3:64002377-64002396 | Msa1116450:CDS | 30.0% |
| ATCAACCATACCAAAATACA+TGG | + | chr7_3:64002385-64002404 | None:intergenic | 30.0% | |
| !!! | TATGGTTGATTTGATTTTGC+AGG | - | chr7_3:64002395-64002414 | Msa1116450:CDS | 30.0% |
| !! | ACATTTTTCTTTTAGGAAGC+TGG | + | chr7_3:64002548-64002567 | None:intergenic | 30.0% |
| ! | TAAGAAAGATGGGCTTAATT+TGG | + | chr7_3:64002634-64002653 | None:intergenic | 30.0% |
| CATTATTGTTGAGGAACAAA+GGG | + | chr7_3:64002731-64002750 | None:intergenic | 30.0% | |
| ACATTATTGTTGAGGAACAA+AGG | + | chr7_3:64002732-64002751 | None:intergenic | 30.0% | |
| !!! | GTGTGATTTTTGGTCTTTTT+GGG | - | chr7_3:64002819-64002838 | Msa1116450:intron | 30.0% |
| AAGCTATTCCCATAAAGAAA+AGG | - | chr7_3:64003026-64003045 | Msa1116450:CDS | 30.0% | |
| ATTCCCATAAAGAAAAGGAA+AGG | - | chr7_3:64003031-64003050 | Msa1116450:CDS | 30.0% | |
| ! | CTTCCTTTCCTTTTCTTTAT+GGG | + | chr7_3:64003037-64003056 | None:intergenic | 30.0% |
| AGAACACTTCTTATTCATCT+TGG | + | chr7_3:64003119-64003138 | None:intergenic | 30.0% | |
| !! | ATGAATAAGAAGTGTTCTCT+GGG | - | chr7_3:64003121-64003140 | Msa1116450:intron | 30.0% |
| TAAAGAAGAAGGTGACAAAA+AGG | - | chr7_3:64003185-64003204 | Msa1116450:intron | 30.0% | |
| AAAGAAGAAGGTGACAAAAA+GGG | - | chr7_3:64003186-64003205 | Msa1116450:intron | 30.0% | |
| CTTATCATCATTCCCATAAA+TGG | + | chr7_3:64003455-64003474 | None:intergenic | 30.0% | |
| TTATGGGAATGATGATAAGT+TGG | - | chr7_3:64003456-64003475 | Msa1116450:CDS | 30.0% | |
| !!! | CTTAAGCTTGTGCTTTATTT+TGG | - | chr7_3:64003738-64003757 | Msa1116450:five_prime_UTR | 30.0% |
| AATTAGTACTTAGAGGTCTT+AGG | + | chr7_3:64003797-64003816 | None:intergenic | 30.0% | |
| CATCTAGTGGTCTACTATAT+GGG | + | chr7_3:64001690-64001709 | None:intergenic | 35.0% | |
| TCATCTAGTGGTCTACTATA+TGG | + | chr7_3:64001691-64001710 | None:intergenic | 35.0% | |
| AGATGAGTAAACTCATCTAG+TGG | + | chr7_3:64001703-64001722 | None:intergenic | 35.0% | |
| ! | GATTGTGAAGAACAAGGTTT+TGG | + | chr7_3:64001996-64002015 | None:intergenic | 35.0% |
| TGTTGTGATTGTGAAGAACA+AGG | + | chr7_3:64002002-64002021 | None:intergenic | 35.0% | |
| ! | TGTTTCAGCTTGTTTGAACT+TGG | - | chr7_3:64002025-64002044 | Msa1116450:CDS | 35.0% |
| AGTGCACTACTAGTTATAAC+TGG | - | chr7_3:64002688-64002707 | Msa1116450:intron | 35.0% | |
| ACAAAGGGCAGTATATAGAT+GGG | + | chr7_3:64002716-64002735 | None:intergenic | 35.0% | |
| AACAAAGGGCAGTATATAGA+TGG | + | chr7_3:64002717-64002736 | None:intergenic | 35.0% | |
| TGAGTGCAACATTATTGTTG+AGG | + | chr7_3:64002740-64002759 | None:intergenic | 35.0% | |
| ! | TCGTTAATGCGTGTGATTTT+TGG | - | chr7_3:64002809-64002828 | Msa1116450:intron | 35.0% |
| !!! | CGTGTGATTTTTGGTCTTTT+TGG | - | chr7_3:64002818-64002837 | Msa1116450:intron | 35.0% |
| !!! | TTTTTGGGTCTACTTAGCAA+TGG | - | chr7_3:64002834-64002853 | Msa1116450:intron | 35.0% |
| GTATATATGTAGATGGGAGA+TGG | - | chr7_3:64002990-64003009 | Msa1116450:intron | 35.0% | |
| ! | CCTTCCTTTCCTTTTCTTTA+TGG | + | chr7_3:64003038-64003057 | None:intergenic | 35.0% |
| CCATAAAGAAAAGGAAAGGA+AGG | - | chr7_3:64003035-64003054 | Msa1116450:CDS | 35.0% | |
| !! | GATGAATAAGAAGTGTTCTC+TGG | - | chr7_3:64003120-64003139 | Msa1116450:intron | 35.0% |
| !! | TGAATAAGAAGTGTTCTCTG+GGG | - | chr7_3:64003122-64003141 | Msa1116450:intron | 35.0% |
| AAGAAGAAGGTGACAAAAAG+GGG | - | chr7_3:64003187-64003206 | Msa1116450:intron | 35.0% | |
| TGTTGTCAACAAACACTTGT+TGG | - | chr7_3:64003265-64003284 | Msa1116450:intron | 35.0% | |
| TCACTTTGTGAGCATCATTT+AGG | - | chr7_3:64003292-64003311 | Msa1116450:intron | 35.0% | |
| CACTTTGTGAGCATCATTTA+GGG | - | chr7_3:64003293-64003312 | Msa1116450:intron | 35.0% | |
| GCAAAGAAAAGAATGAAGCT+TGG | - | chr7_3:64003511-64003530 | Msa1116450:CDS | 35.0% | |
| GAAAAGAATGAAGCTTGGAA+TGG | - | chr7_3:64003516-64003535 | Msa1116450:CDS | 35.0% | |
| !!! | GCTTGTGCTTTATTTTGGTA+CGG | - | chr7_3:64003743-64003762 | Msa1116450:five_prime_UTR | 35.0% |
| CATCTAGTGGTCTACTATAT+GGG | + | chr7_3:64001690-64001709 | None:intergenic | 35.0% | |
| TCATCTAGTGGTCTACTATA+TGG | + | chr7_3:64001691-64001710 | None:intergenic | 35.0% | |
| AGATGAGTAAACTCATCTAG+TGG | + | chr7_3:64001703-64001722 | None:intergenic | 35.0% | |
| ! | GATTGTGAAGAACAAGGTTT+TGG | + | chr7_3:64001996-64002015 | None:intergenic | 35.0% |
| TGTTGTGATTGTGAAGAACA+AGG | + | chr7_3:64002002-64002021 | None:intergenic | 35.0% | |
| ! | TGTTTCAGCTTGTTTGAACT+TGG | - | chr7_3:64002025-64002044 | Msa1116450:CDS | 35.0% |
| AGTGCACTACTAGTTATAAC+TGG | - | chr7_3:64002688-64002707 | Msa1116450:intron | 35.0% | |
| ACAAAGGGCAGTATATAGAT+GGG | + | chr7_3:64002716-64002735 | None:intergenic | 35.0% | |
| AACAAAGGGCAGTATATAGA+TGG | + | chr7_3:64002717-64002736 | None:intergenic | 35.0% | |
| TGAGTGCAACATTATTGTTG+AGG | + | chr7_3:64002740-64002759 | None:intergenic | 35.0% | |
| ! | TCGTTAATGCGTGTGATTTT+TGG | - | chr7_3:64002809-64002828 | Msa1116450:intron | 35.0% |
| !!! | CGTGTGATTTTTGGTCTTTT+TGG | - | chr7_3:64002818-64002837 | Msa1116450:intron | 35.0% |
| !!! | TTTTTGGGTCTACTTAGCAA+TGG | - | chr7_3:64002834-64002853 | Msa1116450:intron | 35.0% |
| GTATATATGTAGATGGGAGA+TGG | - | chr7_3:64002990-64003009 | Msa1116450:intron | 35.0% | |
| ! | CCTTCCTTTCCTTTTCTTTA+TGG | + | chr7_3:64003038-64003057 | None:intergenic | 35.0% |
| CCATAAAGAAAAGGAAAGGA+AGG | - | chr7_3:64003035-64003054 | Msa1116450:CDS | 35.0% | |
| !! | GATGAATAAGAAGTGTTCTC+TGG | - | chr7_3:64003120-64003139 | Msa1116450:intron | 35.0% |
| !! | TGAATAAGAAGTGTTCTCTG+GGG | - | chr7_3:64003122-64003141 | Msa1116450:intron | 35.0% |
| AAGAAGAAGGTGACAAAAAG+GGG | - | chr7_3:64003187-64003206 | Msa1116450:intron | 35.0% | |
| TGTTGTCAACAAACACTTGT+TGG | - | chr7_3:64003265-64003284 | Msa1116450:intron | 35.0% | |
| TCACTTTGTGAGCATCATTT+AGG | - | chr7_3:64003292-64003311 | Msa1116450:intron | 35.0% | |
| CACTTTGTGAGCATCATTTA+GGG | - | chr7_3:64003293-64003312 | Msa1116450:intron | 35.0% | |
| GCAAAGAAAAGAATGAAGCT+TGG | - | chr7_3:64003511-64003530 | Msa1116450:CDS | 35.0% | |
| GAAAAGAATGAAGCTTGGAA+TGG | - | chr7_3:64003516-64003535 | Msa1116450:CDS | 35.0% | |
| !!! | GCTTGTGCTTTATTTTGGTA+CGG | - | chr7_3:64003743-64003762 | Msa1116450:five_prime_UTR | 35.0% |
| ! | TGTTTAGTTTCCCGATCAGT+GGG | + | chr7_3:64002079-64002098 | None:intergenic | 40.0% |
| ! | TTGTTTAGTTTCCCGATCAG+TGG | + | chr7_3:64002080-64002099 | None:intergenic | 40.0% |
| CTGATCGGGAAACTAAACAA+CGG | - | chr7_3:64002080-64002099 | Msa1116450:CDS | 40.0% | |
| AACGGCTATGATTATCCATC+TGG | - | chr7_3:64002098-64002117 | Msa1116450:CDS | 40.0% | |
| !! | TGATTATCCATCTGGTCTTG+AGG | - | chr7_3:64002106-64002125 | Msa1116450:CDS | 40.0% |
| TTTGTCCAATCTCTTGCAAG+TGG | - | chr7_3:64002266-64002285 | Msa1116450:CDS | 40.0% | |
| TTGCAGGATGAGAAAGTTAG+AGG | - | chr7_3:64002411-64002430 | Msa1116450:CDS | 40.0% | |
| AGTGCACTTCAAGTGCAAAA+TGG | + | chr7_3:64002676-64002695 | None:intergenic | 40.0% | |
| CAAAGGGCAGTATATAGATG+GGG | + | chr7_3:64002715-64002734 | None:intergenic | 40.0% | |
| ACTTAGCAATGGAGACATCT+TGG | - | chr7_3:64002845-64002864 | Msa1116450:intron | 40.0% | |
| TGTTCAGAAGAGCTTGATGA+TGG | + | chr7_3:64002888-64002907 | None:intergenic | 40.0% | |
| TCATCAAGCTCTTCTGAACA+AGG | - | chr7_3:64002888-64002907 | Msa1116450:intron | 40.0% | |
| AAAGGAAGGTTCGAGAGTAA+TGG | - | chr7_3:64003049-64003068 | Msa1116450:CDS | 40.0% | |
| AAGGTTCGAGAGTAATGGTA+TGG | - | chr7_3:64003054-64003073 | Msa1116450:CDS | 40.0% | |
| TGTGAGCATCATTTAGGGAA+AGG | - | chr7_3:64003298-64003317 | Msa1116450:intron | 40.0% | |
| CAATAAGCTGCTCATAGATC+GGG | + | chr7_3:64003548-64003567 | None:intergenic | 40.0% | |
| CCAATAAGCTGCTCATAGAT+CGG | + | chr7_3:64003549-64003568 | None:intergenic | 40.0% | |
| CGATCTATGAGCAGCTTATT+GGG | - | chr7_3:64003547-64003566 | Msa1116450:CDS | 40.0% | |
| ! | TGTTTAGTTTCCCGATCAGT+GGG | + | chr7_3:64002079-64002098 | None:intergenic | 40.0% |
| ! | TTGTTTAGTTTCCCGATCAG+TGG | + | chr7_3:64002080-64002099 | None:intergenic | 40.0% |
| CTGATCGGGAAACTAAACAA+CGG | - | chr7_3:64002080-64002099 | Msa1116450:CDS | 40.0% | |
| AACGGCTATGATTATCCATC+TGG | - | chr7_3:64002098-64002117 | Msa1116450:CDS | 40.0% | |
| !! | TGATTATCCATCTGGTCTTG+AGG | - | chr7_3:64002106-64002125 | Msa1116450:CDS | 40.0% |
| TTTGTCCAATCTCTTGCAAG+TGG | - | chr7_3:64002266-64002285 | Msa1116450:CDS | 40.0% | |
| TTGCAGGATGAGAAAGTTAG+AGG | - | chr7_3:64002411-64002430 | Msa1116450:CDS | 40.0% | |
| AGTGCACTTCAAGTGCAAAA+TGG | + | chr7_3:64002676-64002695 | None:intergenic | 40.0% | |
| CAAAGGGCAGTATATAGATG+GGG | + | chr7_3:64002715-64002734 | None:intergenic | 40.0% | |
| ACTTAGCAATGGAGACATCT+TGG | - | chr7_3:64002845-64002864 | Msa1116450:intron | 40.0% | |
| TGTTCAGAAGAGCTTGATGA+TGG | + | chr7_3:64002888-64002907 | None:intergenic | 40.0% | |
| TCATCAAGCTCTTCTGAACA+AGG | - | chr7_3:64002888-64002907 | Msa1116450:intron | 40.0% | |
| AAAGGAAGGTTCGAGAGTAA+TGG | - | chr7_3:64003049-64003068 | Msa1116450:CDS | 40.0% | |
| AAGGTTCGAGAGTAATGGTA+TGG | - | chr7_3:64003054-64003073 | Msa1116450:CDS | 40.0% | |
| TGTGAGCATCATTTAGGGAA+AGG | - | chr7_3:64003298-64003317 | Msa1116450:intron | 40.0% | |
| CAATAAGCTGCTCATAGATC+GGG | + | chr7_3:64003548-64003567 | None:intergenic | 40.0% | |
| CCAATAAGCTGCTCATAGAT+CGG | + | chr7_3:64003549-64003568 | None:intergenic | 40.0% | |
| CGATCTATGAGCAGCTTATT+GGG | - | chr7_3:64003547-64003566 | Msa1116450:CDS | 40.0% | |
| GAGAGTGAATCTCGTGAGTT+TGG | - | chr7_3:64001815-64001834 | Msa1116450:three_prime_UTR | 45.0% | |
| CTTTCAATCTTGCACCCATG+AGG | - | chr7_3:64001859-64001878 | Msa1116450:three_prime_UTR | 45.0% | |
| TGTCTCTTACGGATCCTCAT+GGG | + | chr7_3:64001876-64001895 | None:intergenic | 45.0% | |
| TTGTCTCTTACGGATCCTCA+TGG | + | chr7_3:64001877-64001896 | None:intergenic | 45.0% | |
| !! | AGTGGGAGTGTTTGATCAGA+CGG | + | chr7_3:64002062-64002081 | None:intergenic | 45.0% |
| GATCAAACACTCCCACTGAT+CGG | - | chr7_3:64002065-64002084 | Msa1116450:CDS | 45.0% | |
| ATCAAACACTCCCACTGATC+GGG | - | chr7_3:64002066-64002085 | Msa1116450:CDS | 45.0% | |
| !! | CATCTGGTCTTGAGGAAAGT+GGG | - | chr7_3:64002114-64002133 | Msa1116450:CDS | 45.0% |
| !! | ATCTGGTCTTGAGGAAAGTG+GGG | - | chr7_3:64002115-64002134 | Msa1116450:CDS | 45.0% |
| GCTCAACAAGCTAGATCCTT+TGG | - | chr7_3:64002148-64002167 | Msa1116450:CDS | 45.0% | |
| GGTAACCACTTGCAAGAGAT+TGG | + | chr7_3:64002274-64002293 | None:intergenic | 45.0% | |
| TCTTGCAAGTGGTTACCTCT+TGG | - | chr7_3:64002277-64002296 | Msa1116450:CDS | 45.0% | |
| AGAGGAGAAGAGAAAGAGAG+TGG | - | chr7_3:64002429-64002448 | Msa1116450:CDS | 45.0% | |
| ! | AAAAAGGGGAAGTGCACTGA+TGG | - | chr7_3:64003201-64003220 | Msa1116450:intron | 45.0% |
| TCAAGGTGCAGTCGTGTTAA+TGG | - | chr7_3:64003229-64003248 | Msa1116450:intron | 45.0% | |
| TGCAGTCGTGTTAATGGAAG+AGG | - | chr7_3:64003235-64003254 | Msa1116450:intron | 45.0% | |
| GTCGTGTTAATGGAAGAGGA+TGG | - | chr7_3:64003239-64003258 | Msa1116450:intron | 45.0% | |
| GTGTTAATGGAAGAGGATGG+AGG | - | chr7_3:64003242-64003261 | Msa1116450:intron | 45.0% | |
| CCGATCTATGAGCAGCTTAT+TGG | - | chr7_3:64003546-64003565 | Msa1116450:CDS | 45.0% | |
| ATTGGGACAGACAGACAACA+AGG | - | chr7_3:64003564-64003583 | Msa1116450:CDS | 45.0% | |
| GAGAGTGAATCTCGTGAGTT+TGG | - | chr7_3:64001815-64001834 | Msa1116450:three_prime_UTR | 45.0% | |
| CTTTCAATCTTGCACCCATG+AGG | - | chr7_3:64001859-64001878 | Msa1116450:three_prime_UTR | 45.0% | |
| TGTCTCTTACGGATCCTCAT+GGG | + | chr7_3:64001876-64001895 | None:intergenic | 45.0% | |
| TTGTCTCTTACGGATCCTCA+TGG | + | chr7_3:64001877-64001896 | None:intergenic | 45.0% | |
| !! | AGTGGGAGTGTTTGATCAGA+CGG | + | chr7_3:64002062-64002081 | None:intergenic | 45.0% |
| GATCAAACACTCCCACTGAT+CGG | - | chr7_3:64002065-64002084 | Msa1116450:CDS | 45.0% | |
| ATCAAACACTCCCACTGATC+GGG | - | chr7_3:64002066-64002085 | Msa1116450:CDS | 45.0% | |
| !! | CATCTGGTCTTGAGGAAAGT+GGG | - | chr7_3:64002114-64002133 | Msa1116450:CDS | 45.0% |
| !! | ATCTGGTCTTGAGGAAAGTG+GGG | - | chr7_3:64002115-64002134 | Msa1116450:CDS | 45.0% |
| GCTCAACAAGCTAGATCCTT+TGG | - | chr7_3:64002148-64002167 | Msa1116450:CDS | 45.0% | |
| GGTAACCACTTGCAAGAGAT+TGG | + | chr7_3:64002274-64002293 | None:intergenic | 45.0% | |
| TCTTGCAAGTGGTTACCTCT+TGG | - | chr7_3:64002277-64002296 | Msa1116450:CDS | 45.0% | |
| AGAGGAGAAGAGAAAGAGAG+TGG | - | chr7_3:64002429-64002448 | Msa1116450:CDS | 45.0% | |
| ! | AAAAAGGGGAAGTGCACTGA+TGG | - | chr7_3:64003201-64003220 | Msa1116450:intron | 45.0% |
| TCAAGGTGCAGTCGTGTTAA+TGG | - | chr7_3:64003229-64003248 | Msa1116450:intron | 45.0% | |
| TGCAGTCGTGTTAATGGAAG+AGG | - | chr7_3:64003235-64003254 | Msa1116450:intron | 45.0% | |
| GTCGTGTTAATGGAAGAGGA+TGG | - | chr7_3:64003239-64003258 | Msa1116450:intron | 45.0% | |
| GTGTTAATGGAAGAGGATGG+AGG | - | chr7_3:64003242-64003261 | Msa1116450:intron | 45.0% | |
| CCGATCTATGAGCAGCTTAT+TGG | - | chr7_3:64003546-64003565 | Msa1116450:CDS | 45.0% | |
| ATTGGGACAGACAGACAACA+AGG | - | chr7_3:64003564-64003583 | Msa1116450:CDS | 45.0% | |
| TGGGGATCTGAGAGATGCAA+AGG | + | chr7_3:64001930-64001949 | None:intergenic | 50.0% | |
| ! | GGTGACTGGTTCATCATGTG+GGG | + | chr7_3:64001948-64001967 | None:intergenic | 50.0% |
| ! | CGGTGACTGGTTCATCATGT+GGG | + | chr7_3:64001949-64001968 | None:intergenic | 50.0% |
| ! | TCGGTGACTGGTTCATCATG+TGG | + | chr7_3:64001950-64001969 | None:intergenic | 50.0% |
| CATGATGAACCAGTCACCGA+TGG | - | chr7_3:64001950-64001969 | Msa1116450:CDS | 50.0% | |
| TCACCAAGTTGCACCACCAT+CGG | + | chr7_3:64001969-64001988 | None:intergenic | 50.0% | |
| ! | ATGGTGGTGCAACTTGGTGA+GGG | - | chr7_3:64001969-64001988 | Msa1116450:CDS | 50.0% |
| CCACTTTCCTCAAGACCAGA+TGG | + | chr7_3:64002116-64002135 | None:intergenic | 50.0% | |
| !! | CCATCTGGTCTTGAGGAAAG+TGG | - | chr7_3:64002113-64002132 | Msa1116450:CDS | 50.0% |
| TGTAGATGGGAGATGGTGTG+AGG | - | chr7_3:64002997-64003016 | Msa1116450:intron | 50.0% | |
| GTAGATGGGAGATGGTGTGA+GGG | - | chr7_3:64002998-64003017 | Msa1116450:intron | 50.0% | |
| ! | GTGCACTGATGGAAGGTTCA+AGG | - | chr7_3:64003212-64003231 | Msa1116450:intron | 50.0% |
| TGGGGATCTGAGAGATGCAA+AGG | + | chr7_3:64001930-64001949 | None:intergenic | 50.0% | |
| ! | GGTGACTGGTTCATCATGTG+GGG | + | chr7_3:64001948-64001967 | None:intergenic | 50.0% |
| ! | CGGTGACTGGTTCATCATGT+GGG | + | chr7_3:64001949-64001968 | None:intergenic | 50.0% |
| ! | TCGGTGACTGGTTCATCATG+TGG | + | chr7_3:64001950-64001969 | None:intergenic | 50.0% |
| CATGATGAACCAGTCACCGA+TGG | - | chr7_3:64001950-64001969 | Msa1116450:CDS | 50.0% | |
| TCACCAAGTTGCACCACCAT+CGG | + | chr7_3:64001969-64001988 | None:intergenic | 50.0% | |
| ! | ATGGTGGTGCAACTTGGTGA+GGG | - | chr7_3:64001969-64001988 | Msa1116450:CDS | 50.0% |
| CCACTTTCCTCAAGACCAGA+TGG | + | chr7_3:64002116-64002135 | None:intergenic | 50.0% | |
| !! | CCATCTGGTCTTGAGGAAAG+TGG | - | chr7_3:64002113-64002132 | Msa1116450:CDS | 50.0% |
| TGTAGATGGGAGATGGTGTG+AGG | - | chr7_3:64002997-64003016 | Msa1116450:intron | 50.0% | |
| GTAGATGGGAGATGGTGTGA+GGG | - | chr7_3:64002998-64003017 | Msa1116450:intron | 50.0% | |
| ! | GTGCACTGATGGAAGGTTCA+AGG | - | chr7_3:64003212-64003231 | Msa1116450:intron | 50.0% |
| GATGAACCAGTCACCGATGG+TGG | - | chr7_3:64001953-64001972 | Msa1116450:CDS | 55.0% | |
| ! | TCACCGATGGTGGTGCAACT+TGG | - | chr7_3:64001963-64001982 | Msa1116450:CDS | 55.0% |
| ! | GATGGTGGTGCAACTTGGTG+AGG | - | chr7_3:64001968-64001987 | Msa1116450:CDS | 55.0% |
| ! | AGGGGAAGTGCACTGATGGA+AGG | - | chr7_3:64003205-64003224 | Msa1116450:intron | 55.0% |
| GATGAACCAGTCACCGATGG+TGG | - | chr7_3:64001953-64001972 | Msa1116450:CDS | 55.0% | |
| ! | TCACCGATGGTGGTGCAACT+TGG | - | chr7_3:64001963-64001982 | Msa1116450:CDS | 55.0% |
| ! | GATGGTGGTGCAACTTGGTG+AGG | - | chr7_3:64001968-64001987 | Msa1116450:CDS | 55.0% |
| ! | AGGGGAAGTGCACTGATGGA+AGG | - | chr7_3:64003205-64003224 | Msa1116450:intron | 55.0% |
| GTTGCACCACCATCGGTGAC+TGG | + | chr7_3:64001962-64001981 | None:intergenic | 60.0% | |
| GTTGCACCACCATCGGTGAC+TGG | + | chr7_3:64001962-64001981 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 64001661 | 64003830 | 64001661 | ID=Msa1116450;Name=Msa1116450 |
| chr7_3 | mRNA | 64001661 | 64003830 | 64001661 | ID=Msa1116450-mRNA-1;Parent=Msa1116450;Name=Msa1116450-mRNA-1;_AED=0.29;_eAED=0.29;_QI=215|1|1|1|1|1|4|218|340 |
| chr7_3 | exon | 64001661 | 64002489 | 64001661 | ID=Msa1116450-mRNA-1:exon:15152;Parent=Msa1116450-mRNA-1 |
| chr7_3 | exon | 64002582 | 64002640 | 64002582 | ID=Msa1116450-mRNA-1:exon:15151;Parent=Msa1116450-mRNA-1 |
| chr7_3 | exon | 64003016 | 64003074 | 64003016 | ID=Msa1116450-mRNA-1:exon:15150;Parent=Msa1116450-mRNA-1 |
| chr7_3 | exon | 64003322 | 64003830 | 64003322 | ID=Msa1116450-mRNA-1:exon:15149;Parent=Msa1116450-mRNA-1 |
| chr7_3 | five_prime_UTR | 64003616 | 64003830 | 64003616 | ID=Msa1116450-mRNA-1:five_prime_utr;Parent=Msa1116450-mRNA-1 |
| chr7_3 | CDS | 64003322 | 64003615 | 64003322 | ID=Msa1116450-mRNA-1:cds;Parent=Msa1116450-mRNA-1 |
| chr7_3 | CDS | 64003016 | 64003074 | 64003016 | ID=Msa1116450-mRNA-1:cds;Parent=Msa1116450-mRNA-1 |
| chr7_3 | CDS | 64002582 | 64002640 | 64002582 | ID=Msa1116450-mRNA-1:cds;Parent=Msa1116450-mRNA-1 |
| chr7_3 | CDS | 64001879 | 64002489 | 64001879 | ID=Msa1116450-mRNA-1:cds;Parent=Msa1116450-mRNA-1 |
| chr7_3 | three_prime_UTR | 64001661 | 64001878 | 64001661 | ID=Msa1116450-mRNA-1:three_prime_utr;Parent=Msa1116450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
