Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465640 | XP_013461030.1 | 93.333 | 225 | 14 | 1 | 1 | 225 | 1 | 224 | 4.49e-153 | 434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465640 | sp|Q8W485|Y5010_ARATH | 59.406 | 202 | 74 | 2 | 25 | 225 | 20 | 214 | 6.37e-83 | 249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465640 | A0A072UZ36 | 93.333 | 225 | 14 | 1 | 1 | 225 | 1 | 224 | 2.14e-153 | 434 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0465640 | 0.846054 | 2.762696e-59 | -8.615850e-47 |
| Msa0005160 | Msa0465640 | 0.801449 | 8.958023e-49 | -8.615850e-47 |
| Msa0005690 | Msa0465640 | 0.801503 | 8.733072e-49 | -8.615850e-47 |
| Msa0013810 | Msa0465640 | 0.804863 | 1.760998e-49 | -8.615850e-47 |
| Msa0020320 | Msa0465640 | 0.827193 | 1.791079e-54 | -8.615850e-47 |
| Msa0024330 | Msa0465640 | 0.821778 | 3.368651e-53 | -8.615850e-47 |
| Msa0028280 | Msa0465640 | 0.818544 | 1.855022e-52 | -8.615850e-47 |
| Msa0032450 | Msa0465640 | 0.809301 | 2.024793e-50 | -8.615850e-47 |
| Msa0040090 | Msa0465640 | 0.803185 | 3.932364e-49 | -8.615850e-47 |
| Msa0059880 | Msa0465640 | -0.803192 | 3.920780e-49 | -8.615850e-47 |
| Msa0065190 | Msa0465640 | 0.823777 | 1.153564e-53 | -8.615850e-47 |
| Msa0072830 | Msa0465640 | 0.804526 | 2.070346e-49 | -8.615850e-47 |
| Msa0072860 | Msa0465640 | 0.802084 | 6.634789e-49 | -8.615850e-47 |
| Msa0085580 | Msa0465640 | 0.846951 | 1.572532e-59 | -8.615850e-47 |
| Msa0094990 | Msa0465640 | 0.819384 | 1.194525e-52 | -8.615850e-47 |
| Msa0096020 | Msa0465640 | 0.817623 | 2.995342e-52 | -8.615850e-47 |
| Msa0104390 | Msa0465640 | 0.819005 | 1.457676e-52 | -8.615850e-47 |
| Msa0110500 | Msa0465640 | 0.806283 | 8.868775e-50 | -8.615850e-47 |
| Msa0120320 | Msa0465640 | 0.844435 | 7.576248e-59 | -8.615850e-47 |
| Msa0131090 | Msa0465640 | 0.860217 | 2.409413e-63 | -8.615850e-47 |
| Msa0147540 | Msa0465640 | 0.864078 | 1.574501e-64 | -8.615850e-47 |
| Msa0147800 | Msa0465640 | 0.835714 | 1.428894e-56 | -8.615850e-47 |
| Msa0148430 | Msa0465640 | 0.804132 | 2.501109e-49 | -8.615850e-47 |
| Msa0156780 | Msa0465640 | 0.803141 | 4.016632e-49 | -8.615850e-47 |
| Msa0160650 | Msa0465640 | 0.803225 | 3.858238e-49 | -8.615850e-47 |
| Msa0163410 | Msa0465640 | 0.817181 | 3.766680e-52 | -8.615850e-47 |
| Msa0163530 | Msa0465640 | 0.860179 | 2.472926e-63 | -8.615850e-47 |
| Msa0180290 | Msa0465640 | 0.818740 | 1.673805e-52 | -8.615850e-47 |
| Msa0183920 | Msa0465640 | -0.800973 | 1.120883e-48 | -8.615850e-47 |
| Msa0187980 | Msa0465640 | 0.802269 | 6.079443e-49 | -8.615850e-47 |
| Msa0188500 | Msa0465640 | 0.809498 | 1.836962e-50 | -8.615850e-47 |
| Msa0197730 | Msa0465640 | 0.843097 | 1.727339e-58 | -8.615850e-47 |
| Msa0218430 | Msa0465640 | 0.839271 | 1.750833e-57 | -8.615850e-47 |
| Msa0218860 | Msa0465640 | 0.845053 | 5.160011e-59 | -8.615850e-47 |
| Msa0230980 | Msa0465640 | 0.806639 | 7.460938e-50 | -8.615850e-47 |
| Msa0366120 | Msa0465640 | 0.810308 | 1.229351e-50 | -8.615850e-47 |
| Msa0369430 | Msa0465640 | 0.807693 | 4.462426e-50 | -8.615850e-47 |
| Msa0370690 | Msa0465640 | 0.802500 | 5.447327e-49 | -8.615850e-47 |
| Msa0372990 | Msa0465640 | 0.802384 | 5.754449e-49 | -8.615850e-47 |
| Msa0373950 | Msa0465640 | 0.841219 | 5.424962e-58 | -8.615850e-47 |
| Msa0378670 | Msa0465640 | 0.809572 | 1.770503e-50 | -8.615850e-47 |
| Msa0378700 | Msa0465640 | 0.816094 | 6.602234e-52 | -8.615850e-47 |
| Msa0398850 | Msa0465640 | 0.807926 | 3.982032e-50 | -8.615850e-47 |
| Msa0414990 | Msa0465640 | 0.809288 | 2.037652e-50 | -8.615850e-47 |
| Msa0421100 | Msa0465640 | 0.814024 | 1.901453e-51 | -8.615850e-47 |
| Msa0431940 | Msa0465640 | 0.803957 | 2.719806e-49 | -8.615850e-47 |
| Msa0436590 | Msa0465640 | 0.833485 | 5.191370e-56 | -8.615850e-47 |
| Msa0436600 | Msa0465640 | 0.818337 | 2.066634e-52 | -8.615850e-47 |
| Msa0436610 | Msa0465640 | 0.803193 | 3.917302e-49 | -8.615850e-47 |
| Msa0438440 | Msa0465640 | 0.804735 | 1.873163e-49 | -8.615850e-47 |
| Msa0454940 | Msa0465640 | 0.833533 | 5.048646e-56 | -8.615850e-47 |
| Msa0456420 | Msa0465640 | 0.827355 | 1.637840e-54 | -8.615850e-47 |
| Msa0465640 | Msa0495510 | 0.846657 | 1.892712e-59 | -8.615850e-47 |
| Msa0465640 | Msa0497500 | 0.801835 | 7.464755e-49 | -8.615850e-47 |
| Msa0465640 | Msa0502910 | 0.808714 | 2.703513e-50 | -8.615850e-47 |
| Msa0465640 | Msa0508780 | 0.800726 | 1.259166e-48 | -8.615850e-47 |
| Msa0465640 | Msa0520810 | 0.814349 | 1.611647e-51 | -8.615850e-47 |
| Msa0465640 | Msa0521940 | -0.800067 | 1.714848e-48 | -8.615850e-47 |
| Msa0465640 | Msa0522810 | 0.802444 | 5.593095e-49 | -8.615850e-47 |
| Msa0465640 | Msa0532880 | 0.809696 | 1.665845e-50 | -8.615850e-47 |
| Msa0465640 | Msa0534380 | 0.801600 | 8.340898e-49 | -8.615850e-47 |
| Msa0465640 | Msa0543310 | 0.805390 | 1.366385e-49 | -8.615850e-47 |
| Msa0465640 | Msa0553520 | 0.800385 | 1.477661e-48 | -8.615850e-47 |
| Msa0465640 | Msa0554410 | 0.811568 | 6.558588e-51 | -8.615850e-47 |
| Msa0465640 | Msa0560370 | 0.835368 | 1.747915e-56 | -8.615850e-47 |
| Msa0465640 | Msa0568810 | 0.805937 | 1.048828e-49 | -8.615850e-47 |
| Msa0465640 | Msa0569930 | 0.811379 | 7.211769e-51 | -8.615850e-47 |
| Msa0465640 | Msa0572820 | 0.814651 | 1.382352e-51 | -8.615850e-47 |
| Msa0465640 | Msa0580540 | 0.825050 | 5.790853e-54 | -8.615850e-47 |
| Msa0465640 | Msa0606370 | 0.820864 | 5.474371e-53 | -8.615850e-47 |
| Msa0465640 | Msa0614390 | 0.845578 | 3.721442e-59 | -8.615850e-47 |
| Msa0465640 | Msa0615850 | 0.805789 | 1.126379e-49 | -8.615850e-47 |
| Msa0465640 | Msa0621780 | 0.812243 | 4.675973e-51 | -8.615850e-47 |
| Msa0465640 | Msa0623360 | 0.837578 | 4.785949e-57 | -8.615850e-47 |
| Msa0465640 | Msa0639030 | 0.804437 | 2.160868e-49 | -8.615850e-47 |
| Msa0465640 | Msa0646390 | 0.804619 | 1.980154e-49 | -8.615850e-47 |
| Msa0465640 | Msa0648160 | 0.817848 | 2.665861e-52 | -8.615850e-47 |
| Msa0465640 | Msa0668000 | 0.810350 | 1.204092e-50 | -8.615850e-47 |
| Msa0465640 | Msa0668160 | 0.800998 | 1.107866e-48 | -8.615850e-47 |
| Msa0465640 | Msa0679780 | 0.862615 | 4.469250e-64 | -8.615850e-47 |
| Msa0465640 | Msa0693400 | 0.808782 | 2.614536e-50 | -8.615850e-47 |
| Msa0465640 | Msa0697600 | 0.816745 | 4.719290e-52 | -8.615850e-47 |
| Msa0465640 | Msa0698900 | 0.809287 | 2.038732e-50 | -8.615850e-47 |
| Msa0465640 | Msa0712670 | 0.803269 | 3.777883e-49 | -8.615850e-47 |
| Msa0465640 | Msa0718920 | 0.817299 | 3.543703e-52 | -8.615850e-47 |
| Msa0465640 | Msa0729780 | 0.801062 | 1.075105e-48 | -8.615850e-47 |
| Msa0465640 | Msa0734190 | 0.820191 | 7.814644e-53 | -8.615850e-47 |
| Msa0465640 | Msa0748050 | 0.810919 | 9.069777e-51 | -8.615850e-47 |
| Msa0465640 | Msa0748980 | 0.809485 | 1.849045e-50 | -8.615850e-47 |
| Msa0465640 | Msa0754790 | 0.828588 | 8.271348e-55 | -8.615850e-47 |
| Msa0465640 | Msa0754840 | 0.827117 | 1.867516e-54 | -8.615850e-47 |
| Msa0465640 | Msa0756410 | 0.806368 | 8.512019e-50 | -8.615850e-47 |
| Msa0465640 | Msa0756440 | 0.818601 | 1.800204e-52 | -8.615850e-47 |
| Msa0465640 | Msa0773290 | 0.801749 | 7.773457e-49 | -8.615850e-47 |
| Msa0465640 | Msa0776290 | 0.841243 | 5.346335e-58 | -8.615850e-47 |
| Msa0465640 | Msa0782030 | 0.809155 | 2.175794e-50 | -8.615850e-47 |
| Msa0465640 | Msa0795710 | 0.811587 | 6.498584e-51 | -8.615850e-47 |
| Msa0465640 | Msa0797310 | 0.801731 | 7.840236e-49 | -8.615850e-47 |
| Msa0465640 | Msa0797980 | 0.817536 | 3.134756e-52 | -8.615850e-47 |
| Msa0465640 | Msa0813630 | 0.817095 | 3.939020e-52 | -8.615850e-47 |
| Msa0465640 | Msa0825520 | 0.810801 | 9.619471e-51 | -8.615850e-47 |
| Msa0465640 | Msa0835550 | 0.822372 | 2.453884e-53 | -8.615850e-47 |
| Msa0465640 | Msa0836060 | 0.800427 | 1.448679e-48 | -8.615850e-47 |
| Msa0465640 | Msa0848720 | 0.841141 | 5.688297e-58 | -8.615850e-47 |
| Msa0465640 | Msa0848780 | 0.810120 | 1.349706e-50 | -8.615850e-47 |
| Msa0465640 | Msa0848980 | 0.812976 | 3.233441e-51 | -8.615850e-47 |
| Msa0465640 | Msa0859950 | 0.830271 | 3.225588e-55 | -8.615850e-47 |
| Msa0465640 | Msa0860060 | 0.800791 | 1.221022e-48 | -8.615850e-47 |
| Msa0465640 | Msa0861480 | 0.806331 | 8.663013e-50 | -8.615850e-47 |
| Msa0465640 | Msa0864730 | 0.809978 | 1.448446e-50 | -8.615850e-47 |
| Msa0465640 | Msa0864750 | 0.811813 | 5.802071e-51 | -8.615850e-47 |
| Msa0465640 | Msa0879650 | 0.801181 | 1.016571e-48 | -8.615850e-47 |
| Msa0465640 | Msa0883410 | 0.809288 | 2.037638e-50 | -8.615850e-47 |
| Msa0465640 | Msa0899080 | 0.812945 | 3.283245e-51 | -8.615850e-47 |
| Msa0465640 | Msa0905450 | 0.802675 | 5.013214e-49 | -8.615850e-47 |
| Msa0465640 | Msa0925630 | 0.800216 | 1.599242e-48 | -8.615850e-47 |
| Msa0465640 | Msa0938190 | 0.816825 | 4.528620e-52 | -8.615850e-47 |
| Msa0465640 | Msa0946300 | 0.830882 | 2.286111e-55 | -8.615850e-47 |
| Msa0465640 | Msa0950410 | 0.832433 | 9.479398e-56 | -8.615850e-47 |
| Msa0465640 | Msa0964570 | 0.814359 | 1.603579e-51 | -8.615850e-47 |
| Msa0465640 | Msa0967250 | 0.809875 | 1.524387e-50 | -8.615850e-47 |
| Msa0465640 | Msa0978440 | 0.803703 | 3.071542e-49 | -8.615850e-47 |
| Msa0465640 | Msa0984820 | 0.827292 | 1.695702e-54 | -8.615850e-47 |
| Msa0465640 | Msa0984860 | 0.813252 | 2.812391e-51 | -8.615850e-47 |
| Msa0465640 | Msa0999590 | 0.828610 | 8.170826e-55 | -8.615850e-47 |
| Msa0465640 | Msa1009220 | 0.827662 | 1.382589e-54 | -8.615850e-47 |
| Msa0465640 | Msa1010470 | 0.822445 | 2.359416e-53 | -8.615850e-47 |
| Msa0465640 | Msa1011060 | 0.815055 | 1.124694e-51 | -8.615850e-47 |
| Msa0465640 | Msa1014120 | 0.810405 | 1.171950e-50 | -8.615850e-47 |
| Msa0465640 | Msa1016130 | 0.800251 | 1.572961e-48 | -8.615850e-47 |
| Msa0465640 | Msa1031530 | 0.817437 | 3.298505e-52 | -8.615850e-47 |
| Msa0465640 | Msa1036020 | -0.815469 | 9.097979e-52 | -8.615850e-47 |
| Msa0465640 | Msa1041550 | 0.804865 | 1.759013e-49 | -8.615850e-47 |
| Msa0465640 | Msa1043020 | 0.841153 | 5.646295e-58 | -8.615850e-47 |
| Msa0465640 | Msa1052030 | 0.826835 | 2.180824e-54 | -8.615850e-47 |
| Msa0465640 | Msa1069440 | 0.809115 | 2.219101e-50 | -8.615850e-47 |
| Msa0465640 | Msa1071310 | 0.800697 | 1.276055e-48 | -8.615850e-47 |
| Msa0465640 | Msa1072640 | 0.849626 | 2.865522e-60 | -8.615850e-47 |
| Msa0465640 | Msa1088740 | 0.801809 | 7.557602e-49 | -8.615850e-47 |
| Msa0465640 | Msa1096510 | 0.848705 | 5.169989e-60 | -8.615850e-47 |
| Msa0465640 | Msa1096520 | 0.842975 | 1.861596e-58 | -8.615850e-47 |
| Msa0465640 | Msa1096570 | 0.841547 | 4.448229e-58 | -8.615850e-47 |
| Msa0465640 | Msa1122550 | -0.802006 | 6.882977e-49 | -8.615850e-47 |
| Msa0465640 | Msa1124440 | 0.819432 | 1.164859e-52 | -8.615850e-47 |
| Msa0465640 | Msa1140480 | 0.840452 | 8.623464e-58 | -8.615850e-47 |
| Msa0465640 | Msa1150250 | 0.837703 | 4.444345e-57 | -8.615850e-47 |
| Msa0465640 | Msa1150860 | -0.800113 | 1.678035e-48 | -8.615850e-47 |
| Msa0465640 | Msa1157310 | 0.815656 | 8.266521e-52 | -8.615850e-47 |
| Msa0465640 | Msa1166960 | 0.812952 | 3.272447e-51 | -8.615850e-47 |
| Msa0465640 | Msa1178980 | 0.812467 | 4.177168e-51 | -8.615850e-47 |
| Msa0465640 | Msa1181730 | 0.806629 | 7.495237e-50 | -8.615850e-47 |
| Msa0465640 | Msa1182530 | 0.829919 | 3.932017e-55 | -8.615850e-47 |
| Msa0465640 | Msa1182780 | 0.811937 | 5.451414e-51 | -8.615850e-47 |
| Msa0465640 | Msa1184640 | 0.806391 | 8.416709e-50 | -8.615850e-47 |
| Msa0465640 | Msa1186580 | 0.800698 | 1.275406e-48 | -8.615850e-47 |
| Msa0465640 | Msa1188820 | 0.835380 | 1.736004e-56 | -8.615850e-47 |
| Msa0465640 | Msa1190350 | 0.807434 | 5.064478e-50 | -8.615850e-47 |
| Msa0465640 | Msa1199750 | 0.822076 | 2.875057e-53 | -8.615850e-47 |
| Msa0465640 | Msa1211260 | 0.831754 | 1.395344e-55 | -8.615850e-47 |
| Msa0465640 | Msa1211300 | 0.850553 | 1.576321e-60 | -8.615850e-47 |
| Msa0465640 | Msa1211390 | 0.841899 | 3.590586e-58 | -8.615850e-47 |
| Msa0465640 | Msa1221540 | 0.820272 | 7.488354e-53 | -8.615850e-47 |
| Msa0465640 | Msa1229770 | 0.815122 | 1.086552e-51 | -8.615850e-47 |
| Msa0465640 | Msa1237260 | 0.815610 | 8.464392e-52 | -8.615850e-47 |
| Msa0465640 | Msa1238370 | 0.810587 | 1.070168e-50 | -8.615850e-47 |
| Msa0465640 | Msa1240820 | 0.824604 | 7.375678e-54 | -8.615850e-47 |
| Msa0465640 | Msa1243630 | 0.859502 | 3.956896e-63 | -8.615850e-47 |
| Msa0465640 | Msa1244220 | 0.863225 | 2.897728e-64 | -8.615850e-47 |
| Msa0465640 | Msa1246420 | 0.813072 | 3.079752e-51 | -8.615850e-47 |
| Msa0465640 | Msa1248220 | 0.832488 | 9.188110e-56 | -8.615850e-47 |
| Msa0465640 | Msa1263610 | 0.834145 | 3.550413e-56 | -8.615850e-47 |
| Msa0465640 | Msa1266710 | -0.807728 | 4.385886e-50 | -8.615850e-47 |
| Msa0465640 | Msa1274310 | 0.829158 | 6.020796e-55 | -8.615850e-47 |
| Msa0465640 | Msa1279310 | 0.820081 | 8.279366e-53 | -8.615850e-47 |
| Msa0465640 | Msa1279320 | 0.825953 | 3.538568e-54 | -8.615850e-47 |
| Msa0465640 | Msa1280020 | 0.800417 | 1.455600e-48 | -8.615850e-47 |
| Msa0465640 | Msa1287160 | 0.802410 | 5.684431e-49 | -8.615850e-47 |
| Msa0465640 | Msa1287340 | 0.822887 | 1.862432e-53 | -8.615850e-47 |
| Msa0465640 | Msa1299900 | 0.822386 | 2.435694e-53 | -8.615850e-47 |
| Msa0465640 | Msa1307800 | 0.809378 | 1.949188e-50 | -8.615850e-47 |
| Msa0465640 | Msa1308460 | 0.808977 | 2.375313e-50 | -8.615850e-47 |
| Msa0465640 | Msa1325850 | 0.821828 | 3.281387e-53 | -8.615850e-47 |
| Msa0465640 | Msa1328600 | 0.821842 | 3.256467e-53 | -8.615850e-47 |
| Msa0465640 | Msa1334020 | 0.814100 | 1.829269e-51 | -8.615850e-47 |
| Msa0465640 | Msa1340880 | 0.832139 | 1.121241e-55 | -8.615850e-47 |
| Msa0465640 | Msa1348330 | -0.801698 | 7.965217e-49 | -8.615850e-47 |
| Msa0465640 | Msa1353280 | 0.813947 | 1.977920e-51 | -8.615850e-47 |
| Msa0465640 | Msa1356730 | 0.847674 | 9.956766e-60 | -8.615850e-47 |
| Msa0465640 | Msa1366700 | 0.801574 | 8.442697e-49 | -8.615850e-47 |
| Msa0465640 | Msa1384620 | 0.813917 | 2.007986e-51 | -8.615850e-47 |
| Msa0465640 | Msa1384980 | 0.816879 | 4.403292e-52 | -8.615850e-47 |
| Msa0465640 | Msa1403950 | 0.824878 | 6.358634e-54 | -8.615850e-47 |
| Msa0465640 | Msa1413900 | 0.860684 | 1.740134e-63 | -8.615850e-47 |
| Msa0465640 | Msa1420600 | 0.804019 | 2.641205e-49 | -8.615850e-47 |
| Msa0465640 | Msa1422150 | 0.841701 | 4.051939e-58 | -8.615850e-47 |
| Msa0465640 | Msa1425540 | 0.807123 | 5.895421e-50 | -8.615850e-47 |
| Msa0465640 | Msa1426750 | 0.822754 | 1.999819e-53 | -8.615850e-47 |
| Msa0465640 | Msa1431240 | 0.802396 | 5.721915e-49 | -8.615850e-47 |
| Msa0465640 | Msa1431870 | 0.812860 | 3.427324e-51 | -8.615850e-47 |
| Msa0465640 | Msa1433380 | 0.807354 | 5.266755e-50 | -8.615850e-47 |
| Msa0465640 | Msa1450630 | 0.817467 | 3.247665e-52 | -8.615850e-47 |
| Msa0465640 | Msa1450780 | 0.846915 | 1.608675e-59 | -8.615850e-47 |
| Msa0465640 | Msa1451690 | 0.809939 | 1.476836e-50 | -8.615850e-47 |
| Msa0465640 | Msa1452860 | 0.813228 | 2.846659e-51 | -8.615850e-47 |
| Msa0465640 | Msa1459610 | -0.802186 | 6.322424e-49 | -8.615850e-47 |
| Msa0465640 | Msa1459630 | 0.821854 | 3.235328e-53 | -8.615850e-47 |
| Msa0239610 | Msa0465640 | 0.823144 | 1.622339e-53 | -8.615850e-47 |
| Msa0270460 | Msa0465640 | 0.806955 | 6.396334e-50 | -8.615850e-47 |
| Msa0276800 | Msa0465640 | 0.813428 | 2.572520e-51 | -8.615850e-47 |
| Msa0297860 | Msa0465640 | 0.800920 | 1.149322e-48 | -8.615850e-47 |
| Msa0316720 | Msa0465640 | 0.809878 | 1.521882e-50 | -8.615850e-47 |
| Msa0317360 | Msa0465640 | 0.800977 | 1.119023e-48 | -8.615850e-47 |
| Msa0343370 | Msa0465640 | 0.819572 | 1.082688e-52 | -8.615850e-47 |
| Msa0362430 | Msa0465640 | 0.804990 | 1.656771e-49 | -8.615850e-47 |
| Msa0364010 | Msa0465640 | 0.875018 | 4.287175e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465640 | MtrunA17_Chr3g0117991 | 93.333 | 225 | 14 | 1 | 1 | 225 | 1 | 224 | 4.13e-157 | 434 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465640 | AT5G50100.1 | 59.406 | 202 | 74 | 2 | 25 | 225 | 20 | 214 | 6.48e-84 | 249 |
Find 57 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAATATTGCAGCAAAATT+TGG | 0.108618 | 3_3:-66061951 | None:intergenic |
| AAATACCGTCTTCAAGTTAC+AGG | 0.354145 | 3_3:+66060752 | Msa0465640:CDS |
| TTACTCTCCCGACGAGAATC+AGG | 0.359294 | 3_3:+66059745 | Msa0465640:CDS |
| CGCCATTACAAAATATGAAC+CGG | 0.360782 | 3_3:+66060577 | Msa0465640:CDS |
| ATTGCAAATGGTCAGACTTA+AGG | 0.373818 | 3_3:-66062218 | None:intergenic |
| GAGTGGTGATGATGGGTTAT+GGG | 0.375099 | 3_3:-66058931 | None:intergenic |
| GCCTATATCAACAAACTTGA+TGG | 0.376854 | 3_3:-66059714 | None:intergenic |
| TTGCAAATGGTCAGACTTAA+GGG | 0.386285 | 3_3:-66062217 | None:intergenic |
| ACCATCAAGTTTGTTGATAT+AGG | 0.406883 | 3_3:+66059713 | Msa0465640:CDS |
| TGTACCTCTCGCATGCATAA+TGG | 0.408229 | 3_3:-66059508 | None:intergenic |
| GGGATACCGGGTTTGAGAAT+AGG | 0.422503 | 3_3:-66059029 | None:intergenic |
| AGAGTGGTGATGATGGGTTA+TGG | 0.434759 | 3_3:-66058932 | None:intergenic |
| TGAACAAGTTGGTCTTGGTT+GGG | 0.442711 | 3_3:+66060550 | Msa0465640:CDS |
| GAGAACAGTCTCCTAAAGAT+TGG | 0.446474 | 3_3:+66059455 | Msa0465640:CDS |
| TGGAATTTAAGATTGTGAAA+TGG | 0.448918 | 3_3:-66058963 | None:intergenic |
| ATGAACAAGTTGGTCTTGGT+TGG | 0.452022 | 3_3:+66060549 | Msa0465640:CDS |
| TCCCTGGTTTGGTTGTGGAT+TGG | 0.452797 | 3_3:-66058856 | None:intergenic |
| TCTTATTTACAAAATGCATT+CGG | 0.453962 | 3_3:+66061892 | Msa0465640:three_prime_UTR |
| TTATATGAACAAGTTGGTCT+TGG | 0.455211 | 3_3:+66060545 | Msa0465640:CDS |
| TTACAAAATGCATTCGGTAA+AGG | 0.458636 | 3_3:+66061898 | Msa0465640:three_prime_UTR |
| CTCCAATCCACAACCAAACC+AGG | 0.471077 | 3_3:+66058854 | Msa0465640:five_prime_UTR |
| CGAGAGAAGAATAAGAGTTA+TGG | 0.482537 | 3_3:+66059689 | Msa0465640:CDS |
| TCTAATATTTCTTCGATAGG+TGG | 0.501456 | 3_3:-66061199 | None:intergenic |
| GGTTGTGGATTGGAGATGGA+AGG | 0.508644 | 3_3:-66058846 | None:intergenic |
| ATTCATGCTATTCTATCAGA+TGG | 0.517070 | 3_3:+66060053 | Msa0465640:CDS |
| GTTTGGTTGTGGATTGGAGA+TGG | 0.522053 | 3_3:-66058850 | None:intergenic |
| ATTAGAAGCTCGAAGAAAGA+AGG | 0.528275 | 3_3:+66061216 | Msa0465640:CDS |
| GCTTCTAATATTTCTTCGAT+AGG | 0.530257 | 3_3:-66061202 | None:intergenic |
| AAGATTAAAATGCTGTATGA+TGG | 0.535789 | 3_3:+66059478 | Msa0465640:CDS |
| GTGAAAGATGAGGACGGAGA+TGG | 0.540320 | 3_3:-66058983 | None:intergenic |
| AGGAGATTATATGAACAAGT+TGG | 0.546603 | 3_3:+66060539 | Msa0465640:CDS |
| GGTGAAAAGAGTGGTGATGA+TGG | 0.546710 | 3_3:-66058939 | None:intergenic |
| TCGAGGCCCTGATTCTCGTC+GGG | 0.546724 | 3_3:-66059752 | None:intergenic |
| CAAAATGCATTCGGTAAAGG+TGG | 0.547548 | 3_3:+66061901 | Msa0465640:three_prime_UTR |
| GGTTTGAGAATAGGAAGTGT+TGG | 0.554588 | 3_3:-66059020 | None:intergenic |
| GACCGGTGAAAACTTTCAGA+AGG | 0.563480 | 3_3:+66061841 | Msa0465640:three_prime_UTR |
| TACAATTTCTAAGAAAGAAG+AGG | 0.573127 | 3_3:+66059429 | Msa0465640:CDS |
| GTCGAGGCCCTGATTCTCGT+CGG | 0.574141 | 3_3:-66059753 | None:intergenic |
| AGTGGTGATGATGGGTTATG+GGG | 0.578389 | 3_3:-66058930 | None:intergenic |
| GATGTAAATTTCCATCTGAC+CGG | 0.580067 | 3_3:+66061824 | Msa0465640:exon |
| TACTCTCCCGACGAGAATCA+GGG | 0.588982 | 3_3:+66059746 | Msa0465640:CDS |
| TTTCACATAATAAAATGCAC+TGG | 0.590579 | 3_3:+66062156 | Msa0465640:intron |
| AATTTCTAAGAAAGAAGAGG+AGG | 0.606166 | 3_3:+66059432 | Msa0465640:CDS |
| ATTTCTAAGAAAGAAGAGGA+GGG | 0.607445 | 3_3:+66059433 | Msa0465640:CDS |
| AAGAAGCCATACTTCGACAT+CGG | 0.610113 | 3_3:-66060087 | None:intergenic |
| ATTTACCTGTAACTTGAAGA+CGG | 0.611328 | 3_3:-66060757 | None:intergenic |
| GTGAAAAGAGTGGTGATGAT+GGG | 0.613615 | 3_3:-66058938 | None:intergenic |
| AGGAAGTGTTGGAAAAGCAT+CGG | 0.623406 | 3_3:-66059009 | None:intergenic |
| TCAGACTTAAGGGAGACTAC+AGG | 0.637544 | 3_3:-66062207 | None:intergenic |
| GACTAACAGTTTGATAGTCG+AGG | 0.648679 | 3_3:-66059769 | None:intergenic |
| AATTTAAGATTGTGAAATGG+AGG | 0.655857 | 3_3:-66058960 | None:intergenic |
| GCATCGGCGTGTGAAAGATG+AGG | 0.663047 | 3_3:-66058993 | None:intergenic |
| CGGCGTGTGAAAGATGAGGA+CGG | 0.668499 | 3_3:-66058989 | None:intergenic |
| TCCAATCCACAACCAAACCA+GGG | 0.670806 | 3_3:+66058855 | Msa0465640:five_prime_UTR |
| TTGTCCATTATGCATGCGAG+AGG | 0.675961 | 3_3:+66059504 | Msa0465640:CDS |
| ACACTTCCTATTCTCAAACC+CGG | 0.690891 | 3_3:+66059023 | Msa0465640:CDS |
| TGAAATGGAGGTGAAAAGAG+TGG | 0.691751 | 3_3:-66058948 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTAAAGTATAAATTAAA+AGG | - | chr3_3:66061156-66061175 | None:intergenic | 10.0% |
| !!! | AAAGCTGATTTATTTATTTT+TGG | + | chr3_3:66059807-66059826 | Msa0465640:intron | 15.0% |
| !! | ATTCTATAAAAATTTGAACA+TGG | - | chr3_3:66060193-66060212 | None:intergenic | 15.0% |
| !! | AGTATAATTAATTATTAACG+TGG | + | chr3_3:66061052-66061071 | Msa0465640:intron | 15.0% |
| !!! | TGTTTTTGTTTATTATAGAT+GGG | - | chr3_3:66061522-66061541 | None:intergenic | 15.0% |
| !! | AAAATATGGTATACATTATT+AGG | + | chr3_3:66061606-66061625 | Msa0465640:intron | 15.0% |
| !!! | TTCTTTTCTTTCTTTGTTTT+TGG | + | chr3_3:66059352-66059371 | Msa0465640:intron | 20.0% |
| !!! | ATTTTAATCTTCCAATCTTT+AGG | - | chr3_3:66059469-66059488 | None:intergenic | 20.0% |
| !!! | TGATTTTTGTTTTTCCTTTT+AGG | + | chr3_3:66060019-66060038 | Msa0465640:intron | 20.0% |
| !! | TATCCAGATAATGATATTAA+GGG | - | chr3_3:66060146-66060165 | None:intergenic | 20.0% |
| !! | ATATCCAGATAATGATATTA+AGG | - | chr3_3:66060147-66060166 | None:intergenic | 20.0% |
| !! | TATTTATATCTAACTCTTAC+TGG | - | chr3_3:66060302-66060321 | None:intergenic | 20.0% |
| !! | GTAAAAATAGAATTTCATAC+TGG | - | chr3_3:66060508-66060527 | None:intergenic | 20.0% |
| !! | TTGGTTCATTATGTTATTAA+TGG | + | chr3_3:66060671-66060690 | Msa0465640:intron | 20.0% |
| !! | TTAAACAATATTCACAGATT+GGG | + | chr3_3:66060696-66060715 | Msa0465640:intron | 20.0% |
| !!! | TGATTCTGTATATAGTTTTT+GGG | + | chr3_3:66060727-66060746 | Msa0465640:CDS | 20.0% |
| !! | TTACAATATTACTTACTACA+TGG | - | chr3_3:66060816-66060835 | None:intergenic | 20.0% |
| !! | TATTGTAATTGTTCTTTCTA+TGG | + | chr3_3:66060828-66060847 | Msa0465640:intron | 20.0% |
| !! | ATAATTAATTATTAACGTGG+CGG | + | chr3_3:66061055-66061074 | Msa0465640:intron | 20.0% |
| !!! | ATACTTTAATTGTTCGTTTT+TGG | + | chr3_3:66061164-66061183 | Msa0465640:intron | 20.0% |
| !! | CAATGAAAATTTAACACAAA+AGG | + | chr3_3:66061316-66061335 | Msa0465640:intron | 20.0% |
| !!! | ATTCTCTTTAAAAATTCAGA+TGG | - | chr3_3:66061358-66061377 | None:intergenic | 20.0% |
| !!! | CTGTTTTTGTTTATTATAGA+TGG | - | chr3_3:66061523-66061542 | None:intergenic | 20.0% |
| !!! | AATTGACTCTATTCAAATAT+TGG | + | chr3_3:66061653-66061672 | Msa0465640:intron | 20.0% |
| !!! | TTATTTTCAATCCTTTTTAC+AGG | + | chr3_3:66061770-66061789 | Msa0465640:intron | 20.0% |
| !!! | TATTTTCAATCCTTTTTACA+GGG | + | chr3_3:66061771-66061790 | Msa0465640:intron | 20.0% |
| !!! | TCTTATTTACAAAATGCATT+CGG | + | chr3_3:66061892-66061911 | Msa0465640:three_prime_UTR | 20.0% |
| !! | AATAAAAAGTGAGAAAAACA+AGG | - | chr3_3:66062027-66062046 | None:intergenic | 20.0% |
| !!! | TTGTTTTTCTCACTTTTTAT+TGG | + | chr3_3:66062026-66062045 | Msa0465640:intron | 20.0% |
| !!! | TTTTTATTGGTCAAAAACAA+TGG | + | chr3_3:66062039-66062058 | Msa0465640:intron | 20.0% |
| !! | AATTTAAGATTGTGAAATGG+AGG | - | chr3_3:66058963-66058982 | None:intergenic | 25.0% |
| !! | TGGAATTTAAGATTGTGAAA+TGG | - | chr3_3:66058966-66058985 | None:intergenic | 25.0% |
| ! | AAACCATTGATATTCGATTA+GGG | - | chr3_3:66059053-66059072 | None:intergenic | 25.0% |
| ! | AAAACCATTGATATTCGATT+AGG | - | chr3_3:66059054-66059073 | None:intergenic | 25.0% |
| ! | CCAATGATAATAATAAGGTT+TGG | - | chr3_3:66059308-66059327 | None:intergenic | 25.0% |
| ! | CCAAACCTTATTATTATCAT+TGG | + | chr3_3:66059305-66059324 | Msa0465640:intron | 25.0% |
| ! | AACCTTATTATTATCATTGG+TGG | + | chr3_3:66059308-66059327 | Msa0465640:intron | 25.0% |
| ! | AACCACCAATGATAATAATA+AGG | - | chr3_3:66059313-66059332 | None:intergenic | 25.0% |
| !!! | TTCTTTGTTTTTGGTTTTGT+AGG | + | chr3_3:66059361-66059380 | Msa0465640:intron | 25.0% |
| !!! | TCTTTGTTTTTGGTTTTGTA+GGG | + | chr3_3:66059362-66059381 | Msa0465640:intron | 25.0% |
| !! | TACAATTTCTAAGAAAGAAG+AGG | + | chr3_3:66059429-66059448 | Msa0465640:CDS | 25.0% |
| ! | AAGATTAAAATGCTGTATGA+TGG | + | chr3_3:66059478-66059497 | Msa0465640:CDS | 25.0% |
| !!! | TTGTTGTTATTTGTCGTTTT+AGG | + | chr3_3:66059655-66059674 | Msa0465640:intron | 25.0% |
| !!! | TTTACAAGTAATGAGTTGAT+TGG | + | chr3_3:66059938-66059957 | Msa0465640:intron | 25.0% |
| ! | TATTAAGGGTCTACAATTAT+AGG | - | chr3_3:66060132-66060151 | None:intergenic | 25.0% |
| !!! | TGAAATTCTATTTTTACTGC+AGG | + | chr3_3:66060511-66060530 | Msa0465640:intron | 25.0% |
| ! | GTTAAACAATATTCACAGAT+TGG | + | chr3_3:66060695-66060714 | Msa0465640:intron | 25.0% |
| !! | CTGATTCTGTATATAGTTTT+TGG | + | chr3_3:66060726-66060745 | Msa0465640:CDS | 25.0% |
| !! | TACTTACTACATGGAAATTT+TGG | - | chr3_3:66060807-66060826 | None:intergenic | 25.0% |
| ! | CTAAAAGTTATACCTTAGAT+GGG | + | chr3_3:66060851-66060870 | Msa0465640:intron | 25.0% |
| ! | AATGCTTAGTAGAAATGATA+TGG | + | chr3_3:66060910-66060929 | Msa0465640:intron | 25.0% |
| ! | TGTTTCTTCAGAATAAAATC+AGG | + | chr3_3:66061280-66061299 | Msa0465640:intron | 25.0% |
| ! | TAAAATCAGGAAAATGAAGA+TGG | + | chr3_3:66061293-66061312 | Msa0465640:intron | 25.0% |
| ! | TTAGTCTATCCCTATTAATT+TGG | + | chr3_3:66061445-66061464 | Msa0465640:intron | 25.0% |
| ! | TAGTCTATCCCTATTAATTT+GGG | + | chr3_3:66061446-66061465 | Msa0465640:intron | 25.0% |
| ! | CAACTATACCCAAATTAATA+GGG | - | chr3_3:66061457-66061476 | None:intergenic | 25.0% |
| ! | TCAACTATACCCAAATTAAT+AGG | - | chr3_3:66061458-66061477 | None:intergenic | 25.0% |
| ! | GAAAAATATGTTACCAACAT+TGG | - | chr3_3:66061685-66061704 | None:intergenic | 25.0% |
| ! | TGTAATATGCATAACAATAC+AGG | + | chr3_3:66061707-66061726 | Msa0465640:intron | 25.0% |
| !!! | GTGCTGATTTTTGTTTTTAT+GGG | + | chr3_3:66061745-66061764 | Msa0465640:intron | 25.0% |
| ! | TTTCACATAATAAAATGCAC+TGG | + | chr3_3:66062156-66062175 | Msa0465640:intron | 25.0% |
| !!! | TGAAAGACATTTTTTTTCCC+TGG | - | chr3_3:66058875-66058894 | None:intergenic | 30.0% |
| AACCATTGATATTCGATTAG+GGG | - | chr3_3:66059052-66059071 | None:intergenic | 30.0% | |
| TGAACTAAAACAAAACTTGC+AGG | - | chr3_3:66059144-66059163 | None:intergenic | 30.0% | |
| ! | CCATCAGATTTTAAATTAGC+AGG | - | chr3_3:66059169-66059188 | None:intergenic | 30.0% |
| ! | CCTGCTAATTTAAAATCTGA+TGG | + | chr3_3:66059166-66059185 | Msa0465640:intron | 30.0% |
| ! | AATTTCTAAGAAAGAAGAGG+AGG | + | chr3_3:66059432-66059451 | Msa0465640:CDS | 30.0% |
| ! | ATTTCTAAGAAAGAAGAGGA+GGG | + | chr3_3:66059433-66059452 | Msa0465640:CDS | 30.0% |
| TCAATGAATGACATGAAACA+AGG | - | chr3_3:66059619-66059638 | None:intergenic | 30.0% | |
| !! | ACCATCAAGTTTGTTGATAT+AGG | + | chr3_3:66059713-66059732 | Msa0465640:CDS | 30.0% |
| GGTTTCATAACTCAATTACT+AGG | + | chr3_3:66059828-66059847 | Msa0465640:intron | 30.0% | |
| TTCATGAACATCAACAAATG+TGG | + | chr3_3:66059877-66059896 | Msa0465640:intron | 30.0% | |
| !! | TTGTTTTTCCTTTTAGGCTA+TGG | + | chr3_3:66060025-66060044 | Msa0465640:intron | 30.0% |
| ! | TGTTTTTCCTTTTAGGCTAT+GGG | + | chr3_3:66060026-66060045 | Msa0465640:intron | 30.0% |
| ATTCATGCTATTCTATCAGA+TGG | + | chr3_3:66060053-66060072 | Msa0465640:CDS | 30.0% | |
| AGACCCTTAATATCATTATC+TGG | + | chr3_3:66060140-66060159 | Msa0465640:intron | 30.0% | |
| ! | TAGTATACATGCTCATCTTT+TGG | - | chr3_3:66060271-66060290 | None:intergenic | 30.0% |
| AGGAGATTATATGAACAAGT+TGG | + | chr3_3:66060539-66060558 | Msa0465640:CDS | 30.0% | |
| !! | TTATATGAACAAGTTGGTCT+TGG | + | chr3_3:66060545-66060564 | Msa0465640:CDS | 30.0% |
| !! | AACCGGTTCATATTTTGTAA+TGG | - | chr3_3:66060582-66060601 | None:intergenic | 30.0% |
| ! | TTTTCTGCAGTAAAGCTAAA+GGG | - | chr3_3:66060645-66060664 | None:intergenic | 30.0% |
| ATTTACCTGTAACTTGAAGA+CGG | - | chr3_3:66060760-66060779 | None:intergenic | 30.0% | |
| GCTAAAAGTTATACCTTAGA+TGG | + | chr3_3:66060850-66060869 | Msa0465640:intron | 30.0% | |
| AAAGTGAAAAAACCCATCTA+AGG | - | chr3_3:66060866-66060885 | None:intergenic | 30.0% | |
| !!! | ATGGGTTTTTTCACTTTAGT+TGG | + | chr3_3:66060869-66060888 | Msa0465640:intron | 30.0% |
| ! | TTTTTCACTTTAGTTGGACT+TGG | + | chr3_3:66060875-66060894 | Msa0465640:intron | 30.0% |
| ! | TTTTCACTTTAGTTGGACTT+GGG | + | chr3_3:66060876-66060895 | Msa0465640:intron | 30.0% |
| AGTGATGATCTTATTGATGA+TGG | - | chr3_3:66061010-66061029 | None:intergenic | 30.0% | |
| TCTAATATTTCTTCGATAGG+TGG | - | chr3_3:66061202-66061221 | None:intergenic | 30.0% | |
| GCTTCTAATATTTCTTCGAT+AGG | - | chr3_3:66061205-66061224 | None:intergenic | 30.0% | |
| AACACAAAAGGAATTTCAGT+CGG | + | chr3_3:66061328-66061347 | Msa0465640:intron | 30.0% | |
| TAATAGGGATAGACTAATCT+AGG | - | chr3_3:66061442-66061461 | None:intergenic | 30.0% | |
| !! | TCTTTGATTTTTGCAACATG+AGG | - | chr3_3:66061481-66061500 | None:intergenic | 30.0% |
| TTGTTTATTATAGATGGGCA+TGG | - | chr3_3:66061517-66061536 | None:intergenic | 30.0% | |
| CACAGCAAAATGCTAAAATA+TGG | + | chr3_3:66061592-66061611 | Msa0465640:intron | 30.0% | |
| !! | CTCTATTCAAATATTGGTTC+AGG | + | chr3_3:66061659-66061678 | Msa0465640:intron | 30.0% |
| !!! | GGTGCTGATTTTTGTTTTTA+TGG | + | chr3_3:66061744-66061763 | Msa0465640:intron | 30.0% |
| TTACAAAATGCATTCGGTAA+AGG | + | chr3_3:66061898-66061917 | Msa0465640:three_prime_UTR | 30.0% | |
| TGCAGCAAAATTTGGAAAAA+AGG | - | chr3_3:66061946-66061965 | None:intergenic | 30.0% | |
| CCTAATATTGCAGCAAAATT+TGG | - | chr3_3:66061954-66061973 | None:intergenic | 30.0% | |
| ! | CCAAATTTTGCTGCAATATT+AGG | + | chr3_3:66061951-66061970 | Msa0465640:three_prime_UTR | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr3_3:66062124-66062143 | None:intergenic | 30.0% |
| !!! | GACATTTTTTTTCCCTGGTT+TGG | - | chr3_3:66058870-66058889 | None:intergenic | 35.0% |
| ATCCCCTAATCGAATATCAA+TGG | + | chr3_3:66059047-66059066 | Msa0465640:intron | 35.0% | |
| AGTCCTTAATGTCAGCTTAT+TGG | + | chr3_3:66059193-66059212 | Msa0465640:intron | 35.0% | |
| AGTCCAATAAGCTGACATTA+AGG | - | chr3_3:66059199-66059218 | None:intergenic | 35.0% | |
| !!! | CCACACTTGTTCATTGATTT+TGG | - | chr3_3:66059542-66059561 | None:intergenic | 35.0% |
| CCAAAATCAATGAACAAGTG+TGG | + | chr3_3:66059539-66059558 | Msa0465640:intron | 35.0% | |
| CGAGAGAAGAATAAGAGTTA+TGG | + | chr3_3:66059689-66059708 | Msa0465640:CDS | 35.0% | |
| GCCTATATCAACAAACTTGA+TGG | - | chr3_3:66059717-66059736 | None:intergenic | 35.0% | |
| AATTCTTCCCATAGCCTAAA+AGG | - | chr3_3:66060036-66060055 | None:intergenic | 35.0% | |
| AATGACATCCATTAATGCAG+AGG | + | chr3_3:66060415-66060434 | Msa0465640:intron | 35.0% | |
| ACTTAAGTCCTCTGCATTAA+TGG | - | chr3_3:66060426-66060445 | None:intergenic | 35.0% | |
| ! | AGTGAGAGTACAAATACTGA+GGG | - | chr3_3:66060449-66060468 | None:intergenic | 35.0% |
| TGTTATACGAATCTGTTCAG+TGG | + | chr3_3:66060468-66060487 | Msa0465640:intron | 35.0% | |
| !! | TATTTTTACTGCAGGCGTTT+AGG | + | chr3_3:66060519-66060538 | Msa0465640:intron | 35.0% |
| CGCCATTACAAAATATGAAC+CGG | + | chr3_3:66060577-66060596 | Msa0465640:CDS | 35.0% | |
| TCTTCCTACCATACTCTTAA+AGG | + | chr3_3:66060604-66060623 | Msa0465640:intron | 35.0% | |
| ! | CTTTTCTGCAGTAAAGCTAA+AGG | - | chr3_3:66060646-66060665 | None:intergenic | 35.0% |
| ! | TAGCTTTACTGCAGAAAAGA+TGG | + | chr3_3:66060647-66060666 | Msa0465640:intron | 35.0% |
| ! | AAATACCGTCTTCAAGTTAC+AGG | + | chr3_3:66060752-66060771 | Msa0465640:CDS | 35.0% |
| ! | TCAATAGTTCTATGCTTCTC+GGG | - | chr3_3:66060948-66060967 | None:intergenic | 35.0% |
| ! | CTCAATAGTTCTATGCTTCT+CGG | - | chr3_3:66060949-66060968 | None:intergenic | 35.0% |
| TCTAGTTAGCATAACCATAG+AGG | - | chr3_3:66061117-66061136 | None:intergenic | 35.0% | |
| !!! | ATTGTTCGTTTTTGGTTTCC+AGG | + | chr3_3:66061172-66061191 | Msa0465640:intron | 35.0% |
| ATTAGAAGCTCGAAGAAAGA+AGG | + | chr3_3:66061216-66061235 | Msa0465640:CDS | 35.0% | |
| ATAGACTAATCTAGGCAATG+GGG | - | chr3_3:66061434-66061453 | None:intergenic | 35.0% | |
| GATAGACTAATCTAGGCAAT+GGG | - | chr3_3:66061435-66061454 | None:intergenic | 35.0% | |
| ! | ATACAGGTTTGAGTACTGTT+TGG | + | chr3_3:66061723-66061742 | Msa0465640:intron | 35.0% |
| GATGTAAATTTCCATCTGAC+CGG | + | chr3_3:66061824-66061843 | Msa0465640:exon | 35.0% | |
| AACAAGGTTGTCAACAAAGT+TGG | - | chr3_3:66062011-66062030 | None:intergenic | 35.0% | |
| AGAGAGAAAAAGAAAGAGAG+AGG | + | chr3_3:66062062-66062081 | Msa0465640:intron | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr3_3:66062119-66062138 | Msa0465640:intron | 35.0% | |
| !!! | TTTTTTCCCTGGTTTGGTTG+TGG | - | chr3_3:66058864-66058883 | None:intergenic | 40.0% |
| ! | GTGAAAAGAGTGGTGATGAT+GGG | - | chr3_3:66058941-66058960 | None:intergenic | 40.0% |
| TGAAATGGAGGTGAAAAGAG+TGG | - | chr3_3:66058951-66058970 | None:intergenic | 40.0% | |
| !! | AGGAAGTGTTGGAAAAGCAT+CGG | - | chr3_3:66059012-66059031 | None:intergenic | 40.0% |
| ! | GGTTTGAGAATAGGAAGTGT+TGG | - | chr3_3:66059023-66059042 | None:intergenic | 40.0% |
| ACACTTCCTATTCTCAAACC+CGG | + | chr3_3:66059023-66059042 | Msa0465640:CDS | 40.0% | |
| ATATTCGATTAGGGGATACC+GGG | - | chr3_3:66059044-66059063 | None:intergenic | 40.0% | |
| GATATTCGATTAGGGGATAC+CGG | - | chr3_3:66059045-66059064 | None:intergenic | 40.0% | |
| GAGAACAGTCTCCTAAAGAT+TGG | + | chr3_3:66059455-66059474 | Msa0465640:CDS | 40.0% | |
| ! | GACTAACAGTTTGATAGTCG+AGG | - | chr3_3:66059772-66059791 | None:intergenic | 40.0% |
| AACTGTTAGTCCCTTCTCTA+TGG | + | chr3_3:66059781-66059800 | Msa0465640:intron | 40.0% | |
| !! | CAGCTTTAGACCATAGAGAA+GGG | - | chr3_3:66059794-66059813 | None:intergenic | 40.0% |
| !! | TCAGCTTTAGACCATAGAGA+AGG | - | chr3_3:66059795-66059814 | None:intergenic | 40.0% |
| AAGAAGCCATACTTCGACAT+CGG | - | chr3_3:66060090-66060109 | None:intergenic | 40.0% | |
| TTTCAACTTCTATGTGACCC+CGG | + | chr3_3:66060327-66060346 | Msa0465640:intron | 40.0% | |
| ! | CAGTGAGAGTACAAATACTG+AGG | - | chr3_3:66060450-66060469 | None:intergenic | 40.0% |
| !! | ATGAACAAGTTGGTCTTGGT+TGG | + | chr3_3:66060549-66060568 | Msa0465640:CDS | 40.0% |
| !! | TGAACAAGTTGGTCTTGGTT+GGG | + | chr3_3:66060550-66060569 | Msa0465640:CDS | 40.0% |
| AGTATGGTAGGAAGACTAAC+CGG | - | chr3_3:66060599-66060618 | None:intergenic | 40.0% | |
| ! | TTCTGCGTCCTTTAAGAGTA+TGG | - | chr3_3:66060615-66060634 | None:intergenic | 40.0% |
| TTACTGCAGAAAAGATGGCT+TGG | + | chr3_3:66060652-66060671 | Msa0465640:intron | 40.0% | |
| GGATAGACTAATCTAGGCAA+TGG | - | chr3_3:66061436-66061455 | None:intergenic | 40.0% | |
| ! | AGGCATAGTGTTTAGAGTTC+TGG | + | chr3_3:66061626-66061645 | Msa0465640:intron | 40.0% |
| !! | ATATTGGTTCAGGCCAATGT+TGG | + | chr3_3:66061669-66061688 | Msa0465640:intron | 40.0% |
| GCATACTTCACCCTGTAAAA+AGG | - | chr3_3:66061784-66061803 | None:intergenic | 40.0% | |
| !! | AGCCTTCTGAAAGTTTTCAC+CGG | - | chr3_3:66061846-66061865 | None:intergenic | 40.0% |
| CAAAATGCATTCGGTAAAGG+TGG | + | chr3_3:66061901-66061920 | Msa0465640:three_prime_UTR | 40.0% | |
| !! | GTTTGGTTGTGGATTGGAGA+TGG | - | chr3_3:66058853-66058872 | None:intergenic | 45.0% |
| TCCAATCCACAACCAAACCA+GGG | + | chr3_3:66058855-66058874 | Msa0465640:five_prime_UTR | 45.0% | |
| !! | AGTGGTGATGATGGGTTATG+GGG | - | chr3_3:66058933-66058952 | None:intergenic | 45.0% |
| !! | GAGTGGTGATGATGGGTTAT+GGG | - | chr3_3:66058934-66058953 | None:intergenic | 45.0% |
| !! | AGAGTGGTGATGATGGGTTA+TGG | - | chr3_3:66058935-66058954 | None:intergenic | 45.0% |
| ! | GGTGAAAAGAGTGGTGATGA+TGG | - | chr3_3:66058942-66058961 | None:intergenic | 45.0% |
| TTGTCCATTATGCATGCGAG+AGG | + | chr3_3:66059504-66059523 | Msa0465640:CDS | 45.0% | |
| TGTACCTCTCGCATGCATAA+TGG | - | chr3_3:66059511-66059530 | None:intergenic | 45.0% | |
| ! | GCGTCCTTTAAGAGTATGGT+AGG | - | chr3_3:66060611-66060630 | None:intergenic | 45.0% |
| TGAGCAAAGACTTGCCTCTA+TGG | + | chr3_3:66061100-66061119 | Msa0465640:intron | 45.0% | |
| ! | GAAAGTTTTCACCGGTCAGA+TGG | - | chr3_3:66061838-66061857 | None:intergenic | 45.0% |
| GACCGGTGAAAACTTTCAGA+AGG | + | chr3_3:66061841-66061860 | Msa0465640:three_prime_UTR | 45.0% | |
| TCAGACTTAAGGGAGACTAC+AGG | - | chr3_3:66062210-66062229 | None:intergenic | 45.0% | |
| !! | GGTTGTGGATTGGAGATGGA+AGG | - | chr3_3:66058849-66058868 | None:intergenic | 50.0% |
| CTCCAATCCACAACCAAACC+AGG | + | chr3_3:66058854-66058873 | Msa0465640:five_prime_UTR | 50.0% | |
| !! | TCCCTGGTTTGGTTGTGGAT+TGG | - | chr3_3:66058859-66058878 | None:intergenic | 50.0% |
| GTGAAAGATGAGGACGGAGA+TGG | - | chr3_3:66058986-66059005 | None:intergenic | 50.0% | |
| GGGATACCGGGTTTGAGAAT+AGG | - | chr3_3:66059032-66059051 | None:intergenic | 50.0% | |
| TTACTCTCCCGACGAGAATC+AGG | + | chr3_3:66059745-66059764 | Msa0465640:CDS | 50.0% | |
| TACTCTCCCGACGAGAATCA+GGG | + | chr3_3:66059746-66059765 | Msa0465640:CDS | 50.0% | |
| GATTGGTGCATGCATGTGTG+AGG | + | chr3_3:66059955-66059974 | Msa0465640:intron | 50.0% | |
| TCGTCACCGATGTCGAAGTA+TGG | + | chr3_3:66060081-66060100 | Msa0465640:intron | 50.0% | |
| ACTTCTATGTGACCCCGGAA+TGG | + | chr3_3:66060332-66060351 | Msa0465640:intron | 50.0% | |
| AAAGATGCAGCAGCCATTCC+GGG | - | chr3_3:66060348-66060367 | None:intergenic | 50.0% | |
| CAAAGATGCAGCAGCCATTC+CGG | - | chr3_3:66060349-66060368 | None:intergenic | 50.0% | |
| TAGTTGGACTTGGGCTGATG+TGG | + | chr3_3:66060885-66060904 | Msa0465640:intron | 50.0% | |
| CGGCGTGTGAAAGATGAGGA+CGG | - | chr3_3:66058992-66059011 | None:intergenic | 55.0% | |
| ! | GCATCGGCGTGTGAAAGATG+AGG | - | chr3_3:66058996-66059015 | None:intergenic | 55.0% |
| AAGATGCAGCAGCCATTCCG+GGG | - | chr3_3:66060347-66060366 | None:intergenic | 55.0% | |
| TCTTCGATAGGTGGTCGTCC+TGG | - | chr3_3:66061193-66061212 | None:intergenic | 55.0% | |
| TCGAGGCCCTGATTCTCGTC+GGG | - | chr3_3:66059755-66059774 | None:intergenic | 60.0% | |
| GTCGAGGCCCTGATTCTCGT+CGG | - | chr3_3:66059756-66059775 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 66058820 | 66062229 | 66058820 | ID=Msa0465640;Name=Msa0465640 |
| chr3_3 | mRNA | 66058820 | 66062229 | 66058820 | ID=Msa0465640-mRNA-1;Parent=Msa0465640;Name=Msa0465640-mRNA-1;_AED=0.26;_eAED=0.26;_QI=65|1|1|1|0.87|0.77|9|218|225 |
| chr3_3 | exon | 66058820 | 66059044 | 66058820 | ID=Msa0465640-mRNA-1:exon:14868;Parent=Msa0465640-mRNA-1 |
| chr3_3 | exon | 66059383 | 66059525 | 66059383 | ID=Msa0465640-mRNA-1:exon:14869;Parent=Msa0465640-mRNA-1 |
| chr3_3 | exon | 66059677 | 66059784 | 66059677 | ID=Msa0465640-mRNA-1:exon:14870;Parent=Msa0465640-mRNA-1 |
| chr3_3 | exon | 66060041 | 66060097 | 66060041 | ID=Msa0465640-mRNA-1:exon:14871;Parent=Msa0465640-mRNA-1 |
| chr3_3 | exon | 66060533 | 66060598 | 66060533 | ID=Msa0465640-mRNA-1:exon:14872;Parent=Msa0465640-mRNA-1 |
| chr3_3 | exon | 66060713 | 66060773 | 66060713 | ID=Msa0465640-mRNA-1:exon:14873;Parent=Msa0465640-mRNA-1 |
| chr3_3 | exon | 66061194 | 66061237 | 66061194 | ID=Msa0465640-mRNA-1:exon:14874;Parent=Msa0465640-mRNA-1 |
| chr3_3 | exon | 66061792 | 66061987 | 66061792 | ID=Msa0465640-mRNA-1:exon:14875;Parent=Msa0465640-mRNA-1 |
| chr3_3 | exon | 66062169 | 66062229 | 66062169 | ID=Msa0465640-mRNA-1:exon:14876;Parent=Msa0465640-mRNA-1 |
| chr3_3 | five_prime_UTR | 66058820 | 66058884 | 66058820 | ID=Msa0465640-mRNA-1:five_prime_utr;Parent=Msa0465640-mRNA-1 |
| chr3_3 | CDS | 66058885 | 66059044 | 66058885 | ID=Msa0465640-mRNA-1:cds;Parent=Msa0465640-mRNA-1 |
| chr3_3 | CDS | 66059383 | 66059525 | 66059383 | ID=Msa0465640-mRNA-1:cds;Parent=Msa0465640-mRNA-1 |
| chr3_3 | CDS | 66059677 | 66059784 | 66059677 | ID=Msa0465640-mRNA-1:cds;Parent=Msa0465640-mRNA-1 |
| chr3_3 | CDS | 66060041 | 66060097 | 66060041 | ID=Msa0465640-mRNA-1:cds;Parent=Msa0465640-mRNA-1 |
| chr3_3 | CDS | 66060533 | 66060598 | 66060533 | ID=Msa0465640-mRNA-1:cds;Parent=Msa0465640-mRNA-1 |
| chr3_3 | CDS | 66060713 | 66060773 | 66060713 | ID=Msa0465640-mRNA-1:cds;Parent=Msa0465640-mRNA-1 |
| chr3_3 | CDS | 66061194 | 66061237 | 66061194 | ID=Msa0465640-mRNA-1:cds;Parent=Msa0465640-mRNA-1 |
| chr3_3 | CDS | 66061792 | 66061830 | 66061792 | ID=Msa0465640-mRNA-1:cds;Parent=Msa0465640-mRNA-1 |
| chr3_3 | three_prime_UTR | 66061831 | 66061987 | 66061831 | ID=Msa0465640-mRNA-1:three_prime_utr;Parent=Msa0465640-mRNA-1 |
| chr3_3 | three_prime_UTR | 66062169 | 66062229 | 66062169 | ID=Msa0465640-mRNA-1:three_prime_utr;Parent=Msa0465640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
